GOBO/
GOBO/AmiGO/
GOBO/AmiGO/Indexes/
GOBO/AmiGO/Indexes/AmiGOStatementIndex.pm
GOBO/AmiGO/Indexes/AmiGOWrapper.pm
GOBO/Analysis/
GOBO/Analysis/AnalysisEngine.pm
GOBO/Annotation.pm
GOBO/Attributed.pm
GOBO/Base.pm
GOBO/Bridges/
GOBO/Bridges/Bio/
GOBO/Bridges/Bio/TreeBridge.pm
GOBO/Bridges/Bridge.pm
GOBO/ClassExpression/
GOBO/ClassExpression/BooleanExpression.pm
GOBO/ClassExpression/Complement.pm
GOBO/ClassExpression/Intersection.pm
GOBO/ClassExpression/RelationalExpression.pm
GOBO/ClassExpression/Union.pm
GOBO/ClassExpression.pm
GOBO/ClassNode.pm
GOBO/DB/
GOBO/DB/AnnotationBulkLoader.pm
GOBO/DBIC/
GOBO/DBIC/GODBModel/
GOBO/DBIC/GODBModel/Extension.pm
GOBO/DBIC/GODBModel/Graph.pm
GOBO/DBIC/GODBModel/GraphT2T.pm
GOBO/DBIC/GODBModel/Query.pm
GOBO/DBIC/GODBModel/Resolver.pm
GOBO/DBIC/GODBModel/Schema/
GOBO/DBIC/GODBModel/Schema/Association.pm
GOBO/DBIC/GODBModel/Schema/DB.pm
GOBO/DBIC/GODBModel/Schema/DBXRef.pm
GOBO/DBIC/GODBModel/Schema/Evidence.pm
GOBO/DBIC/GODBModel/Schema/EvidenceDBXRef.pm
GOBO/DBIC/GODBModel/Schema/GeneProduct.pm
GOBO/DBIC/GODBModel/Schema/GeneProductCount.pm
GOBO/DBIC/GODBModel/Schema/GeneProductHomolset.pm
GOBO/DBIC/GODBModel/Schema/GeneProductSeq.pm
GOBO/DBIC/GODBModel/Schema/GeneProductSynonym.pm
GOBO/DBIC/GODBModel/Schema/GraphPath.pm
GOBO/DBIC/GODBModel/Schema/Homolset.pm
GOBO/DBIC/GODBModel/Schema/InstanceData.pm
GOBO/DBIC/GODBModel/Schema/Seq.pm
GOBO/DBIC/GODBModel/Schema/SeqDBXRef.pm
GOBO/DBIC/GODBModel/Schema/Species.pm
GOBO/DBIC/GODBModel/Schema/Term.pm
GOBO/DBIC/GODBModel/Schema/Term2Term.pm
GOBO/DBIC/GODBModel/Schema/TermDBXRef.pm
GOBO/DBIC/GODBModel/Schema/TermSynonym.pm
GOBO/DBIC/GODBModel/Schema.pm
GOBO/DBIC/GODBModel.pm
GOBO/DBIC/t/
GOBO/DBIC/t/data/
GOBO/DBIC/t/godbm_graph.t
GOBO/DBIC/t/godbm_query.t
GOBO/Definable.pm
GOBO/Error.pm
GOBO/Evidence.pm
GOBO/Formula.pm
GOBO/Gene.pm
GOBO/Graph.pm
GOBO/Identified.pm
GOBO/Indexes/
GOBO/Indexes/NodeIndex.pm
GOBO/Indexes/StatementIndex.pm
GOBO/InferenceEngine/
GOBO/InferenceEngine/GAFInferenceEngine.pm
GOBO/InferenceEngine.pm
GOBO/InstanceNode.pm
GOBO/Labeled.pm
GOBO/LinkStatement.pm
GOBO/LiteralStatement.pm
GOBO/NegatedStatement.pm
GOBO/Node.pm
GOBO/Parsers/
GOBO/Parsers/GAFParser.pm
GOBO/Parsers/OBOParser.pm
GOBO/Parsers/Parser.pm
GOBO/Phylo/
GOBO/Phylo/Branch.pm
GOBO/Phylo/PhyloNode.pm
GOBO/Phylo/PhyloTree.pm
GOBO/RelationNode.pm
GOBO/SimpleRDF/
GOBO/SimpleRDF/Indexes/
GOBO/SimpleRDF/Indexes/SimpleRDFStatementIndex.pm
GOBO/SimpleRDF/Indexes/SimpleRDFWrapper.pm
GOBO/Statement.pm
GOBO/Subset.pm
GOBO/Synonym.pm
GOBO/TermNode.pm
GOBO/Util/
GOBO/Util/GraphFunctions.pm
GOBO/Util/LuceneIndexer.pm
GOBO/Writers/
GOBO/Writers/CustomizableWriter.pm
GOBO/Writers/GAFWriter.pm
GOBO/Writers/OBOWriter.pm
GOBO/Writers/OBOXMLWriter.pm
GOBO/Writers/Writer.pm
MANIFEST
Makefile.PL
README
bin/
bin/go-gaf-extract.pl
bin/go-gaf-inference.pl
bin/go-gaf-summarize.pl
bin/go-slimdown.pl
bin/gobo-io.pl
bin/gobo-make-lucene-index.pl
bin/gom-gaf.pl
go-moose-model.graffle
t/
t/analysis_test.t
t/classexpr.t
t/data/
t/data/128up.gaf
t/data/AT1G49810.gaf
t/data/UnionTerms.obo
t/data/cell.obo
t/data/cell_union.obo
t/data/gene_association.mgi.gaf2
t/data/gene_ontology_write.obo
t/data/gpcr.nhx
t/data/gtp.obo
t/data/invalid_taxon_test.gaf
t/data/obo_file.obo
t/data/relation_test.obo
t/data/round_import.obo
t/data/roundtripme.obo
t/data/so-xp.obo
t/data/test-fb.gaf
t/data/transporters.obo
t/dbconnect.t
t/gaf_inference_test.t
t/gaftest.t
t/gaftest_chunked.t
t/graph_creation.t
t/inference_engine_test.t
t/logical_definition_test.t
t/node_removal.t
t/oboparsertest.t
t/parsetest.t
t/relation_test.t
t/roundtrip.t
t/slimmer_test.t
t/union_inference_test.t
META.yml                                 Module meta-data (added by MakeMaker)
