1c1
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: general.sql,v 1.31 2007-03-01 02:45:54 briano Exp $
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< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: cv.sql,v 1.37 2007-02-28 15:08:48 briano Exp $
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< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: pub.sql,v 1.27 2007-02-19 20:50:44 briano Exp $
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< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: organism.sql,v 1.19 2007-04-01 18:45:41 briano Exp $
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< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: sequence.sql,v 1.69 2009-05-14 02:44:23 scottcain Exp $
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> ALTER TABLE feature ALTER residues SET STORAGE EXTERNAL;
> 
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< RNA sequence.';
---
> RNA sequence. The default storage method for the residues column is
> EXTERNAL, which will store it uncompressed to make substring operations
> faster.';
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<     is_current boolean not null default 'true',
---
>     is_current boolean not null default 'false',
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< SET search_path = genetic_code,public;
---
> SET search_path = genetic_code,public,pg_catalog;
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< SET search_path = public;
---
> SET search_path = public,pg_catalog;
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> 
> 
> --function to 'unshare' exons.  It looks for exons that have the same fmin
> --and fmax and belong to the same gene and only keeps one.  The other,
> --redundant exons are marked obsolete in the feature table.  Nothing
> --is done with those features' entries in the featureprop, feature_dbxref,
> --feature_pub, or feature_cvterm tables.  For the moment, I'm assuming
> --that any annotations that they have when this script is run are
> --identical to their non-obsoleted doppelgangers.  If that's not the case, 
> --they could be merged via query.
> --
> --The bulk of this code was contributed by Robin Houston at
> --GeneDB/Sanger Centre.
> 
> CREATE OR REPLACE FUNCTION share_exons () RETURNS void AS '    
>   DECLARE    
>   BEGIN
>     /* Generate a table of shared exons */
>     CREATE temporary TABLE shared_exons AS
>       SELECT gene.feature_id as gene_feature_id
>            , gene.uniquename as gene_uniquename
>            , transcript1.uniquename as transcript1
>            , exon1.feature_id as exon1_feature_id
>            , exon1.uniquename as exon1_uniquename
>            , transcript2.uniquename as transcript2
>            , exon2.feature_id as exon2_feature_id
>            , exon2.uniquename as exon2_uniquename
>            , exon1_loc.fmin /* = exon2_loc.fmin */
>            , exon1_loc.fmax /* = exon2_loc.fmax */
>       FROM feature gene
>         JOIN cvterm gene_type ON gene.type_id = gene_type.cvterm_id
>         JOIN cv gene_type_cv USING (cv_id)
>         JOIN feature_relationship gene_transcript1 ON gene.feature_id = gene_transcript1.object_id
>         JOIN feature transcript1 ON gene_transcript1.subject_id = transcript1.feature_id
>         JOIN cvterm transcript1_type ON transcript1.type_id = transcript1_type.cvterm_id
>         JOIN cv transcript1_type_cv ON transcript1_type.cv_id = transcript1_type_cv.cv_id
>         JOIN feature_relationship transcript1_exon1 ON transcript1_exon1.object_id = transcript1.feature_id
>         JOIN feature exon1 ON transcript1_exon1.subject_id = exon1.feature_id
>         JOIN cvterm exon1_type ON exon1.type_id = exon1_type.cvterm_id
>         JOIN cv exon1_type_cv ON exon1_type.cv_id = exon1_type_cv.cv_id
>         JOIN featureloc exon1_loc ON exon1_loc.feature_id = exon1.feature_id
>         JOIN feature_relationship gene_transcript2 ON gene.feature_id = gene_transcript2.object_id
>         JOIN feature transcript2 ON gene_transcript2.subject_id = transcript2.feature_id
>         JOIN cvterm transcript2_type ON transcript2.type_id = transcript2_type.cvterm_id
>         JOIN cv transcript2_type_cv ON transcript2_type.cv_id = transcript2_type_cv.cv_id
>         JOIN feature_relationship transcript2_exon2 ON transcript2_exon2.object_id = transcript2.feature_id
>         JOIN feature exon2 ON transcript2_exon2.subject_id = exon2.feature_id
>         JOIN cvterm exon2_type ON exon2.type_id = exon2_type.cvterm_id
>         JOIN cv exon2_type_cv ON exon2_type.cv_id = exon2_type_cv.cv_id
>         JOIN featureloc exon2_loc ON exon2_loc.feature_id = exon2.feature_id
>       WHERE gene_type_cv.name = ''sequence''
>         AND gene_type.name = ''gene''
>         AND transcript1_type_cv.name = ''sequence''
>         AND transcript1_type.name = ''mRNA''
>         AND transcript2_type_cv.name = ''sequence''
>         AND transcript2_type.name = ''mRNA''
>         AND exon1_type_cv.name = ''sequence''
>         AND exon1_type.name = ''exon''
>         AND exon2_type_cv.name = ''sequence''
>         AND exon2_type.name = ''exon''
>         AND exon1.feature_id < exon2.feature_id
>         AND exon1_loc.rank = 0
>         AND exon2_loc.rank = 0
>         AND exon1_loc.fmin = exon2_loc.fmin
>         AND exon1_loc.fmax = exon2_loc.fmax
>     ;
>     
>     /* Choose one of the shared exons to be the canonical representative.
>        We pick the one with the smallest feature_id.
>      */
>     CREATE temporary TABLE canonical_exon_representatives AS
>       SELECT gene_feature_id, min(exon1_feature_id) AS canonical_feature_id, fmin
>       FROM shared_exons
>       GROUP BY gene_feature_id,fmin
>     ;
>     
>     CREATE temporary TABLE exon_replacements AS
>       SELECT DISTINCT shared_exons.exon2_feature_id AS actual_feature_id
>                     , canonical_exon_representatives.canonical_feature_id
>                     , canonical_exon_representatives.fmin
>       FROM shared_exons
>         JOIN canonical_exon_representatives USING (gene_feature_id)
>       WHERE shared_exons.exon2_feature_id <> canonical_exon_representatives.canonical_feature_id
>         AND shared_exons.fmin = canonical_exon_representatives.fmin
>     ;
>     
>     UPDATE feature_relationship 
>       SET subject_id = (
>             SELECT canonical_feature_id
>             FROM exon_replacements
>             WHERE feature_relationship.subject_id = exon_replacements.actual_feature_id)
>       WHERE subject_id IN (
>         SELECT actual_feature_id FROM exon_replacements
>     );
>     
>     UPDATE feature_relationship
>       SET object_id = (
>             SELECT canonical_feature_id
>             FROM exon_replacements
>             WHERE feature_relationship.subject_id = exon_replacements.actual_feature_id)
>       WHERE object_id IN (
>         SELECT actual_feature_id FROM exon_replacements
>     );
>     
>     UPDATE feature
>       SET is_obsolete = true
>       WHERE feature_id IN (
>         SELECT actual_feature_id FROM exon_replacements
>     );
>   END;    
> ' LANGUAGE 'plpgsql';
> 
> --This is a function to seek out exons of transcripts and orders them,
> --using feature_relationship.rank, in "transcript order" numbering
> --from 0, taking strand into account. It will not touch transcripts that
> --already have their exons ordered (in case they have a non-obvious
> --ordering due to trans splicing). It takes as an argument the
> --feature.type_id of the parent transcript type (typically, mRNA, although
> --non coding transcript types should work too).
> 
> CREATE OR REPLACE FUNCTION order_exons (integer) RETURNS void AS '
>   DECLARE
>     parent_type      ALIAS FOR $1;
>     exon_id          int;
>     part_of          int;
>     exon_type        int;
>     strand           int;
>     arow             RECORD;
>     order_by         varchar;
>     rowcount         int;
>     exon_count       int;
>     ordered_exons    int;    
>     transcript_id    int;
>     transcript_row   feature%ROWTYPE;
>   BEGIN
>     SELECT INTO part_of cvterm_id FROM cvterm WHERE name=''part_of''
>       AND cv_id IN (SELECT cv_id FROM cv WHERE name=''relationship'');
>     --SELECT INTO exon_type cvterm_id FROM cvterm WHERE name=''exon''
>     --  AND cv_id IN (SELECT cv_id FROM cv WHERE name=''sequence'');
> 
>     --RAISE NOTICE ''part_of %, exon %'',part_of,exon_type;
> 
>     FOR transcript_row IN
>       SELECT * FROM feature WHERE type_id = parent_type
>     LOOP
>       transcript_id = transcript_row.feature_id;
>       SELECT INTO rowcount count(*) FROM feature_relationship
>         WHERE object_id = transcript_id
>           AND rank = 0;
> 
>       --Dont modify this transcript if there are already numbered exons or
>       --if there is only one exon
>       IF rowcount = 1 THEN
>         --RAISE NOTICE ''skipping transcript %, row count %'',transcript_id,rowcount;
>         CONTINUE;
>       END IF;
> 
>       --need to reverse the order if the strand is negative
>       SELECT INTO strand strand FROM featureloc WHERE feature_id=transcript_id;
>       IF strand > 0 THEN
>           order_by = ''fl.fmin'';      
>       ELSE
>           order_by = ''fl.fmax desc'';
>       END IF;
> 
>       exon_count = 0;
>       FOR arow IN EXECUTE 
>         ''SELECT fr.*, fl.fmin, fl.fmax
>           FROM feature_relationship fr, featureloc fl
>           WHERE fr.object_id  = ''||transcript_id||''
>             AND fr.subject_id = fl.feature_id
>             AND fr.type_id    = ''||part_of||''
>             ORDER BY ''||order_by
>       LOOP
>         --number the exons for a given transcript
>         UPDATE feature_relationship
>           SET rank = exon_count 
>           WHERE feature_relationship_id = arow.feature_relationship_id;
>         exon_count = exon_count + 1;
>       END LOOP; 
> 
>     END LOOP;
> 
>   END;
> ' LANGUAGE 'plpgsql';
2210a2400,32477
> --This is an automatically generated file; do not edit it as changes will not
> --be saved.  Instead, modify bin/create-so-bridge.pl, which creates this file.
> 
> 
> CREATE SCHEMA so;
> SET search_path=so,public,pg_catalog;
> 
> --- ************************************************
> --- *** relation: region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_feature with an extent greate ***
> --- *** r than zero. A nucleotide region is comp ***
> --- *** osed of bases and a polypeptide region i ***
> --- *** s composed of amino acids.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW region AS
>   SELECT
>     feature_id AS region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'biomaterial_region' OR cvterm.name = 'experimental_feature' OR cvterm.name = 'biological_region' OR cvterm.name = 'topologically_defined_region' OR cvterm.name = 'reagent' OR cvterm.name = 'engineered_region' OR cvterm.name = 'PCR_product' OR cvterm.name = 'clone' OR cvterm.name = 'rescue_region' OR cvterm.name = 'oligo' OR cvterm.name = 'clone_insert' OR cvterm.name = 'cloned_region' OR cvterm.name = 'databank_entry' OR cvterm.name = 'RAPD' OR cvterm.name = 'genomic_clone' OR cvterm.name = 'cDNA_clone' OR cvterm.name = 'tiling_path_clone' OR cvterm.name = 'validated_cDNA_clone' OR cvterm.name = 'invalidated_cDNA_clone' OR cvterm.name = 'three_prime_RACE_clone' OR cvterm.name = 'chimeric_cDNA_clone' OR cvterm.name = 'genomically_contaminated_cDNA_clone' OR cvterm.name = 'polyA_primed_cDNA_clone' OR cvterm.name = 'partially_processed_cDNA_clone' OR cvterm.name = 'engineered_rescue_region' OR cvterm.name = 'aptamer' OR cvterm.name = 'probe' OR cvterm.name = 'tag' OR cvterm.name = 'ss_oligo' OR cvterm.name = 'ds_oligo' OR cvterm.name = 'DNAzyme' OR cvterm.name = 'synthetic_oligo' OR cvterm.name = 'DNA_aptamer' OR cvterm.name = 'RNA_aptamer' OR cvterm.name = 'microarray_oligo' OR cvterm.name = 'SAGE_tag' OR cvterm.name = 'STS' OR cvterm.name = 'EST' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'five_prime_EST' OR cvterm.name = 'three_prime_EST' OR cvterm.name = 'UST' OR cvterm.name = 'RST' OR cvterm.name = 'three_prime_UST' OR cvterm.name = 'five_prime_UST' OR cvterm.name = 'three_prime_RST' OR cvterm.name = 'five_prime_RST' OR cvterm.name = 'primer' OR cvterm.name = 'sequencing_primer' OR cvterm.name = 'forward_primer' OR cvterm.name = 'reverse_primer' OR cvterm.name = 'RNAi_reagent' OR cvterm.name = 'DNA_constraint_sequence' OR cvterm.name = 'morpholino_oligo' OR cvterm.name = 'PNA_oligo' OR cvterm.name = 'LNA_oligo' OR cvterm.name = 'TNA_oligo' OR cvterm.name = 'GNA_oligo' OR cvterm.name = 'R_GNA_oligo' OR cvterm.name = 'S_GNA_oligo' OR cvterm.name = 'cloned_cDNA_insert' OR cvterm.name = 'cloned_genomic_insert' OR cvterm.name = 'engineered_insert' OR cvterm.name = 'BAC_cloned_genomic_insert' OR cvterm.name = 'engineered_gene' OR cvterm.name = 'engineered_plasmid' OR cvterm.name = 'engineered_rescue_region' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'engineered_foreign_region' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'engineered_insert' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_repetitive_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'match_part' OR cvterm.name = 'assembly_component' OR cvterm.name = 'conserved_region' OR cvterm.name = 'match' OR cvterm.name = 'remark' OR cvterm.name = 'reading_frame' OR cvterm.name = 'QTL' OR cvterm.name = 'consensus_region' OR cvterm.name = 'low_complexity_region' OR cvterm.name = 'assembly' OR cvterm.name = 'transcribed_fragment' OR cvterm.name = 'transcribed_cluster' OR cvterm.name = 'read_pair' OR cvterm.name = 'contig' OR cvterm.name = 'read' OR cvterm.name = 'restriction_fragment' OR cvterm.name = 'golden_path_fragment' OR cvterm.name = 'tiling_path_fragment' OR cvterm.name = 'gap' OR cvterm.name = 'sonicate_fragment' OR cvterm.name = 'contig_read' OR cvterm.name = 'BAC_end' OR cvterm.name = 'dye_terminator_read' OR cvterm.name = 'pyrosequenced_read' OR cvterm.name = 'ligation_based_read' OR cvterm.name = 'polymerase_synthesis_read' OR cvterm.name = 'PAC_end' OR cvterm.name = 'RFLP_fragment' OR cvterm.name = 'tiling_path_clone' OR cvterm.name = 'coding_conserved_region' OR cvterm.name = 'nc_conserved_region' OR cvterm.name = 'homologous_region' OR cvterm.name = 'syntenic_region' OR cvterm.name = 'paralogous_region' OR cvterm.name = 'orthologous_region' OR cvterm.name = 'nucleotide_match' OR cvterm.name = 'protein_match' OR cvterm.name = 'expressed_sequence_match' OR cvterm.name = 'cross_genome_match' OR cvterm.name = 'translated_nucleotide_match' OR cvterm.name = 'primer_match' OR cvterm.name = 'EST_match' OR cvterm.name = 'cDNA_match' OR cvterm.name = 'UST_match' OR cvterm.name = 'RST_match' OR cvterm.name = 'sequence_difference' OR cvterm.name = 'experimental_result_region' OR cvterm.name = 'polypeptide_sequencing_information' OR cvterm.name = 'possible_base_call_error' OR cvterm.name = 'possible_assembly_error' OR cvterm.name = 'overlapping_feature_set' OR cvterm.name = 'no_output' OR cvterm.name = 'overlapping_EST_set' OR cvterm.name = 'non_adjacent_residues' OR cvterm.name = 'non_terminal_residue' OR cvterm.name = 'sequence_conflict' OR cvterm.name = 'sequence_uncertainty' OR cvterm.name = 'ORF' OR cvterm.name = 'blocked_reading_frame' OR cvterm.name = 'mini_gene' OR cvterm.name = 'rescue_mini_gene' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'sequence_assembly' OR cvterm.name = 'fragment_assembly' OR cvterm.name = 'supercontig' OR cvterm.name = 'contig' OR cvterm.name = 'tiling_path' OR cvterm.name = 'virtual_sequence' OR cvterm.name = 'golden_path' OR cvterm.name = 'ultracontig' OR cvterm.name = 'expressed_sequence_assembly' OR cvterm.name = 'fingerprint_map' OR cvterm.name = 'STS_map' OR cvterm.name = 'RH_map' OR cvterm.name = 'unigene_cluster' OR cvterm.name = 'sequence_secondary_structure' OR cvterm.name = 'linkage_group' OR cvterm.name = 'polypeptide' OR cvterm.name = 'deletion' OR cvterm.name = 'origin_of_replication' OR cvterm.name = 'recombination_feature' OR cvterm.name = 'CpG_island' OR cvterm.name = 'binding_site' OR cvterm.name = 'pseudogenic_region' OR cvterm.name = 'cap' OR cvterm.name = 'intergenic_region' OR cvterm.name = 'oligo_U_tail' OR cvterm.name = 'polyA_sequence' OR cvterm.name = 'insertion' OR cvterm.name = 'gene' OR cvterm.name = 'nucleotide_motif' OR cvterm.name = 'chromosome_part' OR cvterm.name = 'gene_member_region' OR cvterm.name = 'transcript_region' OR cvterm.name = 'polypeptide_region' OR cvterm.name = 'gene_component_region' OR cvterm.name = 'mobile_genetic_element' OR cvterm.name = 'replicon' OR cvterm.name = 'base' OR cvterm.name = 'amino_acid' OR cvterm.name = 'gene_group' OR cvterm.name = 'substitution' OR cvterm.name = 'inversion' OR cvterm.name = 'retron' OR cvterm.name = 'G_quartet' OR cvterm.name = 'base_pair' OR cvterm.name = 'RNA_sequence_secondary_structure' OR cvterm.name = 'DNA_sequence_secondary_structure' OR cvterm.name = 'pseudoknot' OR cvterm.name = 'WC_base_pair' OR cvterm.name = 'sugar_edge_base_pair' OR cvterm.name = 'Hoogsteen_base_pair' OR cvterm.name = 'reverse_Hoogsteen_base_pair' OR cvterm.name = 'wobble_base_pair' OR cvterm.name = 'stem_loop' OR cvterm.name = 'tetraloop' OR cvterm.name = 'i_motif' OR cvterm.name = 'recoding_pseudoknot' OR cvterm.name = 'H_pseudoknot' OR cvterm.name = 'D_loop' OR cvterm.name = 'ARS' OR cvterm.name = 'oriT' OR cvterm.name = 'amplification_origin' OR cvterm.name = 'oriV' OR cvterm.name = 'oriC' OR cvterm.name = 'recombination_hotspot' OR cvterm.name = 'haplotype_block' OR cvterm.name = 'sequence_rearrangement_feature' OR cvterm.name = 'iDNA' OR cvterm.name = 'specific_recombination_site' OR cvterm.name = 'chromosome_breakage_sequence' OR cvterm.name = 'internal_eliminated_sequence' OR cvterm.name = 'macronucleus_destined_segment' OR cvterm.name = 'recombination_feature_of_rearranged_gene' OR cvterm.name = 'site_specific_recombination_target_region' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_feature' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_spacer' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_signal_feature' OR cvterm.name = 'D_gene' OR cvterm.name = 'V_gene' OR cvterm.name = 'J_gene' OR cvterm.name = 'C_gene' OR cvterm.name = 'D_J_C_cluster' OR cvterm.name = 'J_C_cluster' OR cvterm.name = 'J_cluster' OR cvterm.name = 'V_cluster' OR cvterm.name = 'V_J_cluster' OR cvterm.name = 'V_J_C_cluster' OR cvterm.name = 'C_cluster' OR cvterm.name = 'D_cluster' OR cvterm.name = 'D_J_cluster' OR cvterm.name = 'three_prime_D_spacer' OR cvterm.name = 'five_prime_D_spacer' OR cvterm.name = 'J_spacer' OR cvterm.name = 'V_spacer' OR cvterm.name = 'VD_gene' OR cvterm.name = 'DJ_gene' OR cvterm.name = 'VDJ_gene' OR cvterm.name = 'VJ_gene' OR cvterm.name = 'DJ_J_cluster' OR cvterm.name = 'VDJ_J_C_cluster' OR cvterm.name = 'VDJ_J_cluster' OR cvterm.name = 'VJ_C_cluster' OR cvterm.name = 'VJ_J_C_cluster' OR cvterm.name = 'VJ_J_cluster' OR cvterm.name = 'D_DJ_C_cluster' OR cvterm.name = 'D_DJ_cluster' OR cvterm.name = 'D_DJ_J_C_cluster' OR cvterm.name = 'D_DJ_J_cluster' OR cvterm.name = 'V_DJ_cluster' OR cvterm.name = 'V_DJ_J_cluster' OR cvterm.name = 'V_VDJ_C_cluster' OR cvterm.name = 'V_VDJ_cluster' OR cvterm.name = 'V_VDJ_J_cluster' OR cvterm.name = 'V_VJ_C_cluster' OR cvterm.name = 'V_VJ_cluster' OR cvterm.name = 'V_VJ_J_cluster' OR cvterm.name = 'V_D_DJ_C_cluster' OR cvterm.name = 'V_D_DJ_cluster' OR cvterm.name = 'V_D_DJ_J_C_cluster' OR cvterm.name = 'V_D_DJ_J_cluster' OR cvterm.name = 'V_D_J_C_cluster' OR cvterm.name = 'V_D_J_cluster' OR cvterm.name = 'DJ_C_cluster' OR cvterm.name = 'DJ_J_C_cluster' OR cvterm.name = 'VDJ_C_cluster' OR cvterm.name = 'V_DJ_C_cluster' OR cvterm.name = 'V_DJ_J_C_cluster' OR cvterm.name = 'V_VDJ_J_C_cluster' OR cvterm.name = 'V_VJ_J_C_cluster' OR cvterm.name = 'J_gene_recombination_feature' OR cvterm.name = 'D_gene_recombination_feature' OR cvterm.name = 'V_gene_recombination_feature' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'integration_excision_site' OR cvterm.name = 'resolution_site' OR cvterm.name = 'inversion_site' OR cvterm.name = 'inversion_site_part' OR cvterm.name = 'attI_site' OR cvterm.name = 'attP_site' OR cvterm.name = 'attB_site' OR cvterm.name = 'attL_site' OR cvterm.name = 'attR_site' OR cvterm.name = 'attC_site' OR cvterm.name = 'attCtn_site' OR cvterm.name = 'loxP_site' OR cvterm.name = 'dif_site' OR cvterm.name = 'FRT_site' OR cvterm.name = 'IRLinv_site' OR cvterm.name = 'IRRinv_site' OR cvterm.name = 'protein_binding_site' OR cvterm.name = 'miRNA_target_site' OR cvterm.name = 'epitope' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'DNA_binding_site' OR cvterm.name = 'primer_binding_site' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'nuclease_binding_site' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'histone_binding_site' OR cvterm.name = 'insulator_binding_site' OR cvterm.name = 'enhancer_binding_site' OR cvterm.name = 'restriction_enzyme_binding_site' OR cvterm.name = 'nuclease_sensitive_site' OR cvterm.name = 'homing_endonuclease_binding_site' OR cvterm.name = 'nuclease_hypersensitive_site' OR cvterm.name = 'group_1_intron_homing_endonuclease_target_region' OR cvterm.name = 'DNAseI_hypersensitive_site' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'pseudogene' OR cvterm.name = 'decayed_exon' OR cvterm.name = 'pseudogenic_exon' OR cvterm.name = 'pseudogenic_transcript' OR cvterm.name = 'pseudogenic_rRNA' OR cvterm.name = 'pseudogenic_tRNA' OR cvterm.name = 'processed_pseudogene' OR cvterm.name = 'pseudogene_by_unequal_crossing_over' OR cvterm.name = 'nuclear_mt_pseudogene' OR cvterm.name = 'cassette_pseudogene' OR cvterm.name = 'transgenic_insertion' OR cvterm.name = 'nuclear_gene' OR cvterm.name = 'mt_gene' OR cvterm.name = 'plastid_gene' OR cvterm.name = 'nucleomorph_gene' OR cvterm.name = 'plasmid_gene' OR cvterm.name = 'proviral_gene' OR cvterm.name = 'transposable_element_gene' OR cvterm.name = 'silenced_gene' OR cvterm.name = 'engineered_gene' OR cvterm.name = 'foreign_gene' OR cvterm.name = 'fusion_gene' OR cvterm.name = 'recombinationally_rearranged_gene' OR cvterm.name = 'gene_with_trans_spliced_transcript' OR cvterm.name = 'gene_with_polycistronic_transcript' OR cvterm.name = 'rescue_gene' OR cvterm.name = 'post_translationally_regulated_gene' OR cvterm.name = 'negatively_autoregulated_gene' OR cvterm.name = 'positively_autoregulated_gene' OR cvterm.name = 'translationally_regulated_gene' OR cvterm.name = 'epigenetically_modified_gene' OR cvterm.name = 'transgene' OR cvterm.name = 'predicted_gene' OR cvterm.name = 'protein_coding_gene' OR cvterm.name = 'retrogene' OR cvterm.name = 'ncRNA_gene' OR cvterm.name = 'cryptic_gene' OR cvterm.name = 'gene_cassette' OR cvterm.name = 'kinetoplast_gene' OR cvterm.name = 'maxicircle_gene' OR cvterm.name = 'minicircle_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'apicoplast_gene' OR cvterm.name = 'ct_gene' OR cvterm.name = 'chromoplast_gene' OR cvterm.name = 'cyanelle_gene' OR cvterm.name = 'leucoplast_gene' OR cvterm.name = 'proplastid_gene' OR cvterm.name = 'endogenous_retroviral_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'gene_silenced_by_DNA_modification' OR cvterm.name = 'gene_silenced_by_RNA_interference' OR cvterm.name = 'gene_silenced_by_histone_modification' OR cvterm.name = 'gene_silenced_by_DNA_methylation' OR cvterm.name = 'gene_silenced_by_histone_methylation' OR cvterm.name = 'gene_silenced_by_histone_deacetylation' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'recombinationally_inverted_gene' OR cvterm.name = 'recombinationally_rearranged_vertebrate_immune_system_gene' OR cvterm.name = 'gene_with_dicistronic_transcript' OR cvterm.name = 'gene_with_dicistronic_primary_transcript' OR cvterm.name = 'gene_with_dicistronic_mRNA' OR cvterm.name = 'wild_type_rescue_gene' OR cvterm.name = 'gene_rearranged_at_DNA_level' OR cvterm.name = 'maternally_imprinted_gene' OR cvterm.name = 'paternally_imprinted_gene' OR cvterm.name = 'allelically_excluded_gene' OR cvterm.name = 'floxed_gene' OR cvterm.name = 'gene_with_polyadenylated_mRNA' OR cvterm.name = 'gene_with_mRNA_with_frameshift' OR cvterm.name = 'gene_with_edited_transcript' OR cvterm.name = 'gene_with_recoded_mRNA' OR cvterm.name = 'gene_with_stop_codon_read_through' OR cvterm.name = 'gene_with_mRNA_recoded_by_translational_bypass' OR cvterm.name = 'gene_with_transcript_with_translational_frameshift' OR cvterm.name = 'gene_with_stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'gene_with_stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'gRNA_gene' OR cvterm.name = 'miRNA_gene' OR cvterm.name = 'scRNA_gene' OR cvterm.name = 'snoRNA_gene' OR cvterm.name = 'snRNA_gene' OR cvterm.name = 'SRP_RNA_gene' OR cvterm.name = 'stRNA_gene' OR cvterm.name = 'tmRNA_gene' OR cvterm.name = 'tRNA_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'DNA_motif' OR cvterm.name = 'RNA_motif' OR cvterm.name = 'PSE_motif' OR cvterm.name = 'GC_rich_promoter_region' OR cvterm.name = 'minus_10_signal' OR cvterm.name = 'minus_35_signal' OR cvterm.name = 'DMv4_motif' OR cvterm.name = 'DMv5_motif' OR cvterm.name = 'DMv3_motif' OR cvterm.name = 'DMv2_motif' OR cvterm.name = 'DPE1_motif' OR cvterm.name = 'DMv1_motif' OR cvterm.name = 'NDM2_motif' OR cvterm.name = 'NDM3_motif' OR cvterm.name = 'RNA_internal_loop' OR cvterm.name = 'A_minor_RNA_motif' OR cvterm.name = 'RNA_junction_loop' OR cvterm.name = 'hammerhead_ribozyme' OR cvterm.name = 'asymmetric_RNA_internal_loop' OR cvterm.name = 'symmetric_RNA_internal_loop' OR cvterm.name = 'K_turn_RNA_motif' OR cvterm.name = 'sarcin_like_RNA_motif' OR cvterm.name = 'RNA_hook_turn' OR cvterm.name = 'chromosome_arm' OR cvterm.name = 'chromosome_band' OR cvterm.name = 'interband' OR cvterm.name = 'chromosomal_regulatory_element' OR cvterm.name = 'chromosomal_structural_element' OR cvterm.name = 'introgressed_chromosome_region' OR cvterm.name = 'matrix_attachment_site' OR cvterm.name = 'centromere' OR cvterm.name = 'telomere' OR cvterm.name = 'transcript' OR cvterm.name = 'regulatory_region' OR cvterm.name = 'polycistronic_transcript' OR cvterm.name = 'transcript_with_translational_frameshift' OR cvterm.name = 'primary_transcript' OR cvterm.name = 'mature_transcript' OR cvterm.name = 'transcript_bound_by_nucleic_acid' OR cvterm.name = 'transcript_bound_by_protein' OR cvterm.name = 'enzymatic_RNA' OR cvterm.name = 'trans_spliced_transcript' OR cvterm.name = 'monocistronic_transcript' OR cvterm.name = 'aberrant_processed_transcript' OR cvterm.name = 'edited_transcript' OR cvterm.name = 'alternatively_spliced_transcript' OR cvterm.name = 'dicistronic_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'protein_coding_primary_transcript' OR cvterm.name = 'nc_primary_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'mini_exon_donor_RNA' OR cvterm.name = 'antisense_primary_transcript' OR cvterm.name = 'capped_primary_transcript' OR cvterm.name = 'pre_edited_mRNA' OR cvterm.name = 'scRNA_primary_transcript' OR cvterm.name = 'rRNA_primary_transcript' OR cvterm.name = 'tRNA_primary_transcript' OR cvterm.name = 'snRNA_primary_transcript' OR cvterm.name = 'snoRNA_primary_transcript' OR cvterm.name = 'tmRNA_primary_transcript' OR cvterm.name = 'SRP_RNA_primary_transcript' OR cvterm.name = 'miRNA_primary_transcript' OR cvterm.name = 'rRNA_small_subunit_primary_transcript' OR cvterm.name = 'rRNA_large_subunit_primary_transcript' OR cvterm.name = 'alanine_tRNA_primary_transcript' OR cvterm.name = 'arginine_tRNA_primary_transcript' OR cvterm.name = 'asparagine_tRNA_primary_transcript' OR cvterm.name = 'aspartic_acid_tRNA_primary_transcript' OR cvterm.name = 'cysteine_tRNA_primary_transcript' OR cvterm.name = 'glutamic_acid_tRNA_primary_transcript' OR cvterm.name = 'glutamine_tRNA_primary_transcript' OR cvterm.name = 'glycine_tRNA_primary_transcript' OR cvterm.name = 'histidine_tRNA_primary_transcript' OR cvterm.name = 'isoleucine_tRNA_primary_transcript' OR cvterm.name = 'leucine_tRNA_primary_transcript' OR cvterm.name = 'lysine_tRNA_primary_transcript' OR cvterm.name = 'methionine_tRNA_primary_transcript' OR cvterm.name = 'phenylalanine_tRNA_primary_transcript' OR cvterm.name = 'proline_tRNA_primary_transcript' OR cvterm.name = 'serine_tRNA_primary_transcript' OR cvterm.name = 'threonine_tRNA_primary_transcript' OR cvterm.name = 'tryptophan_tRNA_primary_transcript' OR cvterm.name = 'tyrosine_tRNA_primary_transcript' OR cvterm.name = 'valine_tRNA_primary_transcript' OR cvterm.name = 'pyrrolysine_tRNA_primary_transcript' OR cvterm.name = 'selenocysteine_tRNA_primary_transcript' OR cvterm.name = 'methylation_guide_snoRNA_primary_transcript' OR cvterm.name = 'rRNA_cleavage_snoRNA_primary_transcript' OR cvterm.name = 'C_D_box_snoRNA_primary_transcript' OR cvterm.name = 'H_ACA_box_snoRNA_primary_transcript' OR cvterm.name = 'U14_snoRNA_primary_transcript' OR cvterm.name = 'stRNA_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'mRNA' OR cvterm.name = 'ncRNA' OR cvterm.name = 'mRNA_with_frameshift' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'exemplar_mRNA' OR cvterm.name = 'capped_mRNA' OR cvterm.name = 'polyadenylated_mRNA' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'recoded_mRNA' OR cvterm.name = 'mRNA_with_minus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_2_frameshift' OR cvterm.name = 'mRNA_with_minus_2_frameshift' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'mRNA_recoded_by_translational_bypass' OR cvterm.name = 'mRNA_recoded_by_codon_redefinition' OR cvterm.name = 'scRNA' OR cvterm.name = 'rRNA' OR cvterm.name = 'tRNA' OR cvterm.name = 'snRNA' OR cvterm.name = 'snoRNA' OR cvterm.name = 'small_regulatory_ncRNA' OR cvterm.name = 'RNase_MRP_RNA' OR cvterm.name = 'RNase_P_RNA' OR cvterm.name = 'telomerase_RNA' OR cvterm.name = 'vault_RNA' OR cvterm.name = 'Y_RNA' OR cvterm.name = 'rasiRNA' OR cvterm.name = 'SRP_RNA' OR cvterm.name = 'guide_RNA' OR cvterm.name = 'antisense_RNA' OR cvterm.name = 'siRNA' OR cvterm.name = 'stRNA' OR cvterm.name = 'class_II_RNA' OR cvterm.name = 'class_I_RNA' OR cvterm.name = 'piRNA' OR cvterm.name = 'lincRNA' OR cvterm.name = 'rRNA_cleavage_RNA' OR cvterm.name = 'small_subunit_rRNA' OR cvterm.name = 'large_subunit_rRNA' OR cvterm.name = 'rRNA_18S' OR cvterm.name = 'rRNA_16S' OR cvterm.name = 'rRNA_5_8S' OR cvterm.name = 'rRNA_5S' OR cvterm.name = 'rRNA_28S' OR cvterm.name = 'rRNA_23S' OR cvterm.name = 'rRNA_25S' OR cvterm.name = 'rRNA_21S' OR cvterm.name = 'alanyl_tRNA' OR cvterm.name = 'asparaginyl_tRNA' OR cvterm.name = 'aspartyl_tRNA' OR cvterm.name = 'cysteinyl_tRNA' OR cvterm.name = 'glutaminyl_tRNA' OR cvterm.name = 'glutamyl_tRNA' OR cvterm.name = 'glycyl_tRNA' OR cvterm.name = 'histidyl_tRNA' OR cvterm.name = 'isoleucyl_tRNA' OR cvterm.name = 'leucyl_tRNA' OR cvterm.name = 'lysyl_tRNA' OR cvterm.name = 'methionyl_tRNA' OR cvterm.name = 'phenylalanyl_tRNA' OR cvterm.name = 'prolyl_tRNA' OR cvterm.name = 'seryl_tRNA' OR cvterm.name = 'threonyl_tRNA' OR cvterm.name = 'tryptophanyl_tRNA' OR cvterm.name = 'tyrosyl_tRNA' OR cvterm.name = 'valyl_tRNA' OR cvterm.name = 'pyrrolysyl_tRNA' OR cvterm.name = 'arginyl_tRNA' OR cvterm.name = 'selenocysteinyl_tRNA' OR cvterm.name = 'U1_snRNA' OR cvterm.name = 'U2_snRNA' OR cvterm.name = 'U4_snRNA' OR cvterm.name = 'U4atac_snRNA' OR cvterm.name = 'U5_snRNA' OR cvterm.name = 'U6_snRNA' OR cvterm.name = 'U6atac_snRNA' OR cvterm.name = 'U11_snRNA' OR cvterm.name = 'U12_snRNA' OR cvterm.name = 'C_D_box_snoRNA' OR cvterm.name = 'H_ACA_box_snoRNA' OR cvterm.name = 'U14_snoRNA' OR cvterm.name = 'U3_snoRNA' OR cvterm.name = 'methylation_guide_snoRNA' OR cvterm.name = 'pseudouridylation_guide_snoRNA' OR cvterm.name = 'miRNA' OR cvterm.name = 'RNA_6S' OR cvterm.name = 'CsrB_RsmB_RNA' OR cvterm.name = 'DsrA_RNA' OR cvterm.name = 'OxyS_RNA' OR cvterm.name = 'RprA_RNA' OR cvterm.name = 'RRE_RNA' OR cvterm.name = 'spot_42_RNA' OR cvterm.name = 'tmRNA' OR cvterm.name = 'GcvB_RNA' OR cvterm.name = 'MicF_RNA' OR cvterm.name = 'ribozyme' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'edited_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'attenuator' OR cvterm.name = 'terminator' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'polyA_signal_sequence' OR cvterm.name = 'gene_group_regulatory_region' OR cvterm.name = 'transcriptional_cis_regulatory_region' OR cvterm.name = 'splicing_regulatory_region' OR cvterm.name = 'cis_regulatory_frameshift_element' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'eukaryotic_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'terminator_of_type_2_RNApol_III_promoter' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'operator' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'promoter' OR cvterm.name = 'insulator' OR cvterm.name = 'CRM' OR cvterm.name = 'promoter_targeting_sequence' OR cvterm.name = 'bidirectional_promoter' OR cvterm.name = 'RNA_polymerase_promoter' OR cvterm.name = 'RNApol_I_promoter' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'Phage_RNA_Polymerase_Promoter' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'SP6_RNA_Polymerase_Promoter' OR cvterm.name = 'T3_RNA_Polymerase_Promoter' OR cvterm.name = 'T7_RNA_Polymerase_Promoter' OR cvterm.name = 'locus_control_region' OR cvterm.name = 'enhancer' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'silencer' OR cvterm.name = 'enhancer_bound_by_factor' OR cvterm.name = 'shadow_enhancer' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'splice_enhancer' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'exonic_splice_enhancer' OR cvterm.name = 'exon' OR cvterm.name = 'edited_transcript_feature' OR cvterm.name = 'mature_transcript_region' OR cvterm.name = 'primary_transcript_region' OR cvterm.name = 'exon_region' OR cvterm.name = 'anchor_binding_site' OR cvterm.name = 'coding_exon' OR cvterm.name = 'noncoding_exon' OR cvterm.name = 'interior_exon' OR cvterm.name = 'exon_of_single_exon_gene' OR cvterm.name = 'interior_coding_exon' OR cvterm.name = 'five_prime_coding_exon' OR cvterm.name = 'three_prime_coding_exon' OR cvterm.name = 'three_prime_noncoding_exon' OR cvterm.name = 'five_prime_noncoding_exon' OR cvterm.name = 'pre_edited_region' OR cvterm.name = 'editing_block' OR cvterm.name = 'editing_domain' OR cvterm.name = 'unedited_region' OR cvterm.name = 'mRNA_region' OR cvterm.name = 'tmRNA_region' OR cvterm.name = 'guide_RNA_region' OR cvterm.name = 'tRNA_region' OR cvterm.name = 'riboswitch' OR cvterm.name = 'UTR' OR cvterm.name = 'CDS' OR cvterm.name = 'codon' OR cvterm.name = 'five_prime_open_reading_frame' OR cvterm.name = 'UTR_region' OR cvterm.name = 'CDS_region' OR cvterm.name = 'translational_frameshift' OR cvterm.name = 'recoding_stimulatory_region' OR cvterm.name = 'five_prime_UTR' OR cvterm.name = 'three_prime_UTR' OR cvterm.name = 'internal_UTR' OR cvterm.name = 'untranslated_region_polycistronic_mRNA' OR cvterm.name = 'edited_CDS' OR cvterm.name = 'CDS_fragment' OR cvterm.name = 'CDS_independently_known' OR cvterm.name = 'CDS_predicted' OR cvterm.name = 'orphan_CDS' OR cvterm.name = 'CDS_supported_by_sequence_similarity_data' OR cvterm.name = 'CDS_supported_by_domain_match_data' OR cvterm.name = 'CDS_supported_by_EST_or_cDNA_data' OR cvterm.name = 'recoded_codon' OR cvterm.name = 'start_codon' OR cvterm.name = 'stop_codon' OR cvterm.name = 'stop_codon_read_through' OR cvterm.name = 'stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'non_canonical_start_codon' OR cvterm.name = 'four_bp_start_codon' OR cvterm.name = 'CTG_start_codon' OR cvterm.name = 'ribosome_entry_site' OR cvterm.name = 'polyA_site' OR cvterm.name = 'upstream_AUG_codon' OR cvterm.name = 'AU_rich_element' OR cvterm.name = 'Bruno_response_element' OR cvterm.name = 'iron_responsive_element' OR cvterm.name = 'internal_ribosome_entry_site' OR cvterm.name = 'Shine_Dalgarno_sequence' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'coding_start' OR cvterm.name = 'coding_end' OR cvterm.name = 'plus_1_translational_frameshift' OR cvterm.name = 'plus_2_translational_frameshift' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'SECIS_element' OR cvterm.name = 'three_prime_recoding_site' OR cvterm.name = 'five_prime_recoding_site' OR cvterm.name = 'stop_codon_signal' OR cvterm.name = 'three_prime_stem_loop_structure' OR cvterm.name = 'flanking_three_prime_quadruplet_recoding_signal' OR cvterm.name = 'three_prime_repeat_recoding_signal' OR cvterm.name = 'distant_three_prime_recoding_signal' OR cvterm.name = 'UAG_stop_codon_signal' OR cvterm.name = 'UAA_stop_codon_signal' OR cvterm.name = 'UGA_stop_codon_signal' OR cvterm.name = 'tmRNA_coding_piece' OR cvterm.name = 'tmRNA_acceptor_piece' OR cvterm.name = 'anchor_region' OR cvterm.name = 'template_region' OR cvterm.name = 'anticodon_loop' OR cvterm.name = 'anticodon' OR cvterm.name = 'CCA_tail' OR cvterm.name = 'DHU_loop' OR cvterm.name = 'T_loop' OR cvterm.name = 'splice_site' OR cvterm.name = 'intron' OR cvterm.name = 'clip' OR cvterm.name = 'TSS' OR cvterm.name = 'transcription_end_site' OR cvterm.name = 'spliced_leader_RNA' OR cvterm.name = 'rRNA_primary_transcript_region' OR cvterm.name = 'spliceosomal_intron_region' OR cvterm.name = 'intron_domain' OR cvterm.name = 'miRNA_primary_transcript_region' OR cvterm.name = 'outron' OR cvterm.name = 'cis_splice_site' OR cvterm.name = 'trans_splice_site' OR cvterm.name = 'five_prime_cis_splice_site' OR cvterm.name = 'three_prime_cis_splice_site' OR cvterm.name = 'recursive_splice_site' OR cvterm.name = 'canonical_five_prime_splice_site' OR cvterm.name = 'non_canonical_five_prime_splice_site' OR cvterm.name = 'canonical_three_prime_splice_site' OR cvterm.name = 'non_canonical_three_prime_splice_site' OR cvterm.name = 'trans_splice_acceptor_site' OR cvterm.name = 'trans_splice_donor_site' OR cvterm.name = 'SL1_acceptor_site' OR cvterm.name = 'SL2_acceptor_site' OR cvterm.name = 'five_prime_intron' OR cvterm.name = 'interior_intron' OR cvterm.name = 'three_prime_intron' OR cvterm.name = 'twintron' OR cvterm.name = 'UTR_intron' OR cvterm.name = 'autocatalytically_spliced_intron' OR cvterm.name = 'spliceosomal_intron' OR cvterm.name = 'mobile_intron' OR cvterm.name = 'endonuclease_spliced_intron' OR cvterm.name = 'five_prime_UTR_intron' OR cvterm.name = 'three_prime_UTR_intron' OR cvterm.name = 'group_I_intron' OR cvterm.name = 'group_II_intron' OR cvterm.name = 'group_III_intron' OR cvterm.name = 'group_IIA_intron' OR cvterm.name = 'group_IIB_intron' OR cvterm.name = 'U2_intron' OR cvterm.name = 'U12_intron' OR cvterm.name = 'archaeal_intron' OR cvterm.name = 'tRNA_intron' OR cvterm.name = 'five_prime_clip' OR cvterm.name = 'three_prime_clip' OR cvterm.name = 'major_TSS' OR cvterm.name = 'minor_TSS' OR cvterm.name = 'transcribed_spacer_region' OR cvterm.name = 'internal_transcribed_spacer_region' OR cvterm.name = 'external_transcribed_spacer_region' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'branch_site' OR cvterm.name = 'polypyrimidine_tract' OR cvterm.name = 'internal_guide_sequence' OR cvterm.name = 'mirtron' OR cvterm.name = 'pre_miRNA' OR cvterm.name = 'miRNA_stem' OR cvterm.name = 'miRNA_loop' OR cvterm.name = 'miRNA_antiguide' OR cvterm.name = 'noncoding_region_of_exon' OR cvterm.name = 'coding_region_of_exon' OR cvterm.name = 'three_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_coding_region' OR cvterm.name = 'three_prime_coding exon_coding_region' OR cvterm.name = 'mature_protein_region' OR cvterm.name = 'immature_peptide_region' OR cvterm.name = 'compositionally_biased_region_of_peptide' OR cvterm.name = 'polypeptide_structural_region' OR cvterm.name = 'polypeptide_variation_site' OR cvterm.name = 'cleaved_peptide_region' OR cvterm.name = 'hydrophobic_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_region' OR cvterm.name = 'active_peptide' OR cvterm.name = 'polypeptide_domain' OR cvterm.name = 'membrane_structure' OR cvterm.name = 'extramembrane_polypeptide_region' OR cvterm.name = 'intramembrane_polypeptide_region' OR cvterm.name = 'polypeptide_secondary_structure' OR cvterm.name = 'polypeptide_structural_motif' OR cvterm.name = 'intrinsically_unstructured_polypeptide_region' OR cvterm.name = 'cytoplasmic_polypeptide_region' OR cvterm.name = 'non_cytoplasmic_polypeptide_region' OR cvterm.name = 'membrane_peptide_loop' OR cvterm.name = 'transmembrane_polypeptide_region' OR cvterm.name = 'asx_motif' OR cvterm.name = 'beta_bulge' OR cvterm.name = 'beta_bulge_loop' OR cvterm.name = 'beta_strand' OR cvterm.name = 'peptide_helix' OR cvterm.name = 'polypeptide_nest_motif' OR cvterm.name = 'schellmann_loop' OR cvterm.name = 'serine_threonine_motif' OR cvterm.name = 'serine_threonine_staple_motif' OR cvterm.name = 'polypeptide_turn_motif' OR cvterm.name = 'catmat_left_handed_three' OR cvterm.name = 'catmat_left_handed_four' OR cvterm.name = 'catmat_right_handed_three' OR cvterm.name = 'catmat_right_handed_four' OR cvterm.name = 'alpha_beta_motif' OR cvterm.name = 'peptide_coil' OR cvterm.name = 'beta_bulge_loop_five' OR cvterm.name = 'beta_bulge_loop_six' OR cvterm.name = 'antiparallel_beta_strand' OR cvterm.name = 'parallel_beta_strand' OR cvterm.name = 'left_handed_peptide_helix' OR cvterm.name = 'right_handed_peptide_helix' OR cvterm.name = 'alpha_helix' OR cvterm.name = 'pi_helix' OR cvterm.name = 'three_ten_helix' OR cvterm.name = 'polypeptide_nest_left_right_motif' OR cvterm.name = 'polypeptide_nest_right_left_motif' OR cvterm.name = 'schellmann_loop_seven' OR cvterm.name = 'schellmann_loop_six' OR cvterm.name = 'asx_turn' OR cvterm.name = 'beta_turn' OR cvterm.name = 'gamma_turn' OR cvterm.name = 'serine_threonine_turn' OR cvterm.name = 'asx_turn_left_handed_type_one' OR cvterm.name = 'asx_turn_left_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_two' OR cvterm.name = 'beta_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_right_handed_type_two' OR cvterm.name = 'beta_turn_type_six' OR cvterm.name = 'beta_turn_type_eight' OR cvterm.name = 'beta_turn_type_six_a' OR cvterm.name = 'beta_turn_type_six_b' OR cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'gamma_turn_classic' OR cvterm.name = 'gamma_turn_inverse' OR cvterm.name = 'st_turn_left_handed_type_one' OR cvterm.name = 'st_turn_left_handed_type_two' OR cvterm.name = 'st_turn_right_handed_type_one' OR cvterm.name = 'st_turn_right_handed_type_two' OR cvterm.name = 'coiled_coil' OR cvterm.name = 'helix_turn_helix' OR cvterm.name = 'natural_variant_site' OR cvterm.name = 'mutated_variant_site' OR cvterm.name = 'alternate_sequence_site' OR cvterm.name = 'signal_peptide' OR cvterm.name = 'cleaved_initiator_methionine' OR cvterm.name = 'transit_peptide' OR cvterm.name = 'intein' OR cvterm.name = 'propeptide_cleavage_site' OR cvterm.name = 'propeptide' OR cvterm.name = 'cleaved_for_gpi_anchor_region' OR cvterm.name = 'lipoprotein_signal_peptide' OR cvterm.name = 'n_terminal_region' OR cvterm.name = 'c_terminal_region' OR cvterm.name = 'central_hydrophobic_region_of_signal_peptide' OR cvterm.name = 'polypeptide_domain' OR cvterm.name = 'polypeptide_motif' OR cvterm.name = 'polypeptide_repeat' OR cvterm.name = 'biochemical_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_motif' OR cvterm.name = 'post_translationally_modified_region' OR cvterm.name = 'conformational_switch' OR cvterm.name = 'molecular_contact_region' OR cvterm.name = 'polypeptide_binding_motif' OR cvterm.name = 'polypeptide_catalytic_motif' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'non_transcribed_region' OR cvterm.name = 'gene_fragment' OR cvterm.name = 'TSS_region' OR cvterm.name = 'gene_segment' OR cvterm.name = 'mobile_intron' OR cvterm.name = 'extrachromosomal_mobile_genetic_element' OR cvterm.name = 'integrated_mobile_genetic_element' OR cvterm.name = 'viral_sequence' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'transposable_element' OR cvterm.name = 'proviral_region' OR cvterm.name = 'integron' OR cvterm.name = 'genomic_island' OR cvterm.name = 'integrated_plasmid' OR cvterm.name = 'cointegrated_plasmid' OR cvterm.name = 'retrotransposon' OR cvterm.name = 'DNA_transposon' OR cvterm.name = 'foreign_transposable_element' OR cvterm.name = 'transgenic_transposable_element' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'transposon_fragment' OR cvterm.name = 'LTR_retrotransposon' OR cvterm.name = 'non_LTR_retrotransposon' OR cvterm.name = 'RR_tract' OR cvterm.name = 'LINE_element' OR cvterm.name = 'SINE_element' OR cvterm.name = 'terminal_inverted_repeat_element' OR cvterm.name = 'foldback_element' OR cvterm.name = 'conjugative_transposon' OR cvterm.name = 'helitron' OR cvterm.name = 'MITE' OR cvterm.name = 'insertion_sequence' OR cvterm.name = 'polinton' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'prophage' OR cvterm.name = 'pathogenic_island' OR cvterm.name = 'metabolic_island' OR cvterm.name = 'adaptive_island' OR cvterm.name = 'symbiosis_island' OR cvterm.name = 'cryptic_prophage' OR cvterm.name = 'defective_conjugative_transposon' OR cvterm.name = 'plasmid' OR cvterm.name = 'chromosome' OR cvterm.name = 'vector_replicon' OR cvterm.name = 'maxicircle' OR cvterm.name = 'minicircle' OR cvterm.name = 'viral_sequence' OR cvterm.name = 'engineered_plasmid' OR cvterm.name = 'episome' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'mitochondrial_chromosome' OR cvterm.name = 'chloroplast_chromosome' OR cvterm.name = 'chromoplast_chromosome' OR cvterm.name = 'cyanelle_chromosome' OR cvterm.name = 'leucoplast_chromosome' OR cvterm.name = 'macronuclear_chromosome' OR cvterm.name = 'micronuclear_chromosome' OR cvterm.name = 'nuclear_chromosome' OR cvterm.name = 'nucleomorphic_chromosome' OR cvterm.name = 'DNA_chromosome' OR cvterm.name = 'RNA_chromosome' OR cvterm.name = 'apicoplast_chromosome' OR cvterm.name = 'double_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_DNA_chromosome' OR cvterm.name = 'linear_double_stranded_DNA_chromosome' OR cvterm.name = 'circular_double_stranded_DNA_chromosome' OR cvterm.name = 'linear_single_stranded_DNA_chromosome' OR cvterm.name = 'circular_single_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_RNA_chromosome' OR cvterm.name = 'double_stranded_RNA_chromosome' OR cvterm.name = 'linear_single_stranded_RNA_chromosome' OR cvterm.name = 'circular_single_stranded_RNA_chromosome' OR cvterm.name = 'linear_double_stranded_RNA_chromosome' OR cvterm.name = 'circular_double_stranded_RNA_chromosome' OR cvterm.name = 'YAC' OR cvterm.name = 'BAC' OR cvterm.name = 'PAC' OR cvterm.name = 'cosmid' OR cvterm.name = 'phagemid' OR cvterm.name = 'fosmid' OR cvterm.name = 'lambda_vector' OR cvterm.name = 'plasmid_vector' OR cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'modified_RNA_base_feature' OR cvterm.name = 'modified_base_site' OR cvterm.name = 'inosine' OR cvterm.name = 'seven_methylguanine' OR cvterm.name = 'ribothymidine' OR cvterm.name = 'modified_adenosine' OR cvterm.name = 'modified_cytidine' OR cvterm.name = 'modified_guanosine' OR cvterm.name = 'modified_uridine' OR cvterm.name = 'modified_inosine' OR cvterm.name = 'methylinosine' OR cvterm.name = 'one_methylinosine' OR cvterm.name = 'one_two_prime_O_dimethylinosine' OR cvterm.name = 'two_prime_O_methylinosine' OR cvterm.name = 'one_methyladenosine' OR cvterm.name = 'two_methyladenosine' OR cvterm.name = 'N6_methyladenosine' OR cvterm.name = 'two_prime_O_methyladenosine' OR cvterm.name = 'two_methylthio_N6_methyladenosine' OR cvterm.name = 'N6_isopentenyladenosine' OR cvterm.name = 'two_methylthio_N6_isopentenyladenosine' OR cvterm.name = 'N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'two_methylthio_N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'N6_glycinylcarbamoyladenosine' OR cvterm.name = 'N6_threonylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_threonyl_carbamoyladenosine' OR cvterm.name = 'N6_methyl_N6_threonylcarbamoyladenosine' OR cvterm.name = 'N6_hydroxynorvalylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine' OR cvterm.name = 'two_prime_O_ribosyladenosine_phosphate' OR cvterm.name = 'N6_N6_dimethyladenosine' OR cvterm.name = 'N6_2_prime_O_dimethyladenosine' OR cvterm.name = 'N6_N6_2_prime_O_trimethyladenosine' OR cvterm.name = 'one_two_prime_O_dimethyladenosine' OR cvterm.name = 'N6_acetyladenosine' OR cvterm.name = 'three_methylcytidine' OR cvterm.name = 'five_methylcytidine' OR cvterm.name = 'two_prime_O_methylcytidine' OR cvterm.name = 'two_thiocytidine' OR cvterm.name = 'N4_acetylcytidine' OR cvterm.name = 'five_formylcytidine' OR cvterm.name = 'five_two_prime_O_dimethylcytidine' OR cvterm.name = 'N4_acetyl_2_prime_O_methylcytidine' OR cvterm.name = 'lysidine' OR cvterm.name = 'N4_methylcytidine' OR cvterm.name = 'N4_2_prime_O_dimethylcytidine' OR cvterm.name = 'five_hydroxymethylcytidine' OR cvterm.name = 'five_formyl_two_prime_O_methylcytidine' OR cvterm.name = 'N4_N4_2_prime_O_trimethylcytidine' OR cvterm.name = 'seven_deazaguanosine' OR cvterm.name = 'one_methylguanosine' OR cvterm.name = 'N2_methylguanosine' OR cvterm.name = 'seven_methylguanosine' OR cvterm.name = 'two_prime_O_methylguanosine' OR cvterm.name = 'N2_N2_dimethylguanosine' OR cvterm.name = 'N2_2_prime_O_dimethylguanosine' OR cvterm.name = 'N2_N2_2_prime_O_trimethylguanosine' OR cvterm.name = 'two_prime_O_ribosylguanosine_phosphate' OR cvterm.name = 'wybutosine' OR cvterm.name = 'peroxywybutosine' OR cvterm.name = 'hydroxywybutosine' OR cvterm.name = 'undermodified_hydroxywybutosine' OR cvterm.name = 'wyosine' OR cvterm.name = 'methylwyosine' OR cvterm.name = 'N2_7_dimethylguanosine' OR cvterm.name = 'N2_N2_7_trimethylguanosine' OR cvterm.name = 'one_two_prime_O_dimethylguanosine' OR cvterm.name = 'four_demethylwyosine' OR cvterm.name = 'isowyosine' OR cvterm.name = 'N2_7_2prirme_O_trimethylguanosine' OR cvterm.name = 'queuosine' OR cvterm.name = 'epoxyqueuosine' OR cvterm.name = 'galactosyl_queuosine' OR cvterm.name = 'mannosyl_queuosine' OR cvterm.name = 'seven_cyano_seven_deazaguanosine' OR cvterm.name = 'seven_aminomethyl_seven_deazaguanosine' OR cvterm.name = 'archaeosine' OR cvterm.name = 'dihydrouridine' OR cvterm.name = 'pseudouridine' OR cvterm.name = 'five_methyluridine' OR cvterm.name = 'two_prime_O_methyluridine' OR cvterm.name = 'five_two_prime_O_dimethyluridine' OR cvterm.name = 'one_methylpseudouridine' OR cvterm.name = 'two_prime_O_methylpseudouridine' OR cvterm.name = 'two_thiouridine' OR cvterm.name = 'four_thiouridine' OR cvterm.name = 'five_methyl_2_thiouridine' OR cvterm.name = 'two_thio_two_prime_O_methyluridine' OR cvterm.name = 'three_three_amino_three_carboxypropyl_uridine' OR cvterm.name = 'five_hydroxyuridine' OR cvterm.name = 'five_methoxyuridine' OR cvterm.name = 'uridine_five_oxyacetic_acid' OR cvterm.name = 'uridine_five_oxyacetic_acid_methyl_ester' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine_methyl_ester' OR cvterm.name = 'five_methoxycarbonylmethyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_thiouridine' OR cvterm.name = 'five_aminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyluridine' OR cvterm.name = 'five_methylaminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyl_two_selenouridine' OR cvterm.name = 'five_carbamoylmethyluridine' OR cvterm.name = 'five_carbamoylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_thiouridine' OR cvterm.name = 'three_methyluridine' OR cvterm.name = 'one_methyl_three_three_amino_three_carboxypropyl_pseudouridine' OR cvterm.name = 'five_carboxymethyluridine' OR cvterm.name = 'three_two_prime_O_dimethyluridine' OR cvterm.name = 'five_methyldihydrouridine' OR cvterm.name = 'three_methylpseudouridine' OR cvterm.name = 'five_taurinomethyluridine' OR cvterm.name = 'five_taurinomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_uridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'methylated_base_feature' OR cvterm.name = 'methylated_C' OR cvterm.name = 'methylated_A' OR cvterm.name = 'catalytic_residue' OR cvterm.name = 'modified_amino_acid_feature' OR cvterm.name = 'alanine' OR cvterm.name = 'valine' OR cvterm.name = 'leucine' OR cvterm.name = 'isoleucine' OR cvterm.name = 'proline' OR cvterm.name = 'tryptophan' OR cvterm.name = 'phenylalanine' OR cvterm.name = 'methionine' OR cvterm.name = 'glycine' OR cvterm.name = 'serine' OR cvterm.name = 'threonine' OR cvterm.name = 'tyrosine' OR cvterm.name = 'cysteine' OR cvterm.name = 'glutamine' OR cvterm.name = 'asparagine' OR cvterm.name = 'lysine' OR cvterm.name = 'argenine' OR cvterm.name = 'histidine' OR cvterm.name = 'aspartic_acid' OR cvterm.name = 'glutamic_acid' OR cvterm.name = 'selenocysteine' OR cvterm.name = 'pyrrolysine' OR cvterm.name = 'modified_glycine' OR cvterm.name = 'modified_L_alanine' OR cvterm.name = 'modified_L_asparagine' OR cvterm.name = 'modified_L_aspartic_acid' OR cvterm.name = 'modified_L_cysteine' OR cvterm.name = 'modified_L_glutamic_acid' OR cvterm.name = 'modified_L_threonine' OR cvterm.name = 'modified_L_tryptophan' OR cvterm.name = 'modified_L_glutamine' OR cvterm.name = 'modified_L_methionine' OR cvterm.name = 'modified_L_isoleucine' OR cvterm.name = 'modified_L_phenylalanine' OR cvterm.name = 'modified_L_histidine' OR cvterm.name = 'modified_L_serine' OR cvterm.name = 'modified_L_lysine' OR cvterm.name = 'modified_L_leucine' OR cvterm.name = 'modified_L_selenocysteine' OR cvterm.name = 'modified_L_valine' OR cvterm.name = 'modified_L_proline' OR cvterm.name = 'modified_L_tyrosine' OR cvterm.name = 'modified_L_arginine' OR cvterm.name = 'operon' OR cvterm.name = 'gene_array' OR cvterm.name = 'gene_subarray' OR cvterm.name = 'gene_cassette_array' OR cvterm.name = 'regulon' OR cvterm.name = 'sequence_length_variation' OR cvterm.name = 'SNP' OR cvterm.name = 'complex_substitution' OR cvterm.name = 'point_mutation' OR cvterm.name = 'simple_sequence_length_variation' OR cvterm.name = 'MNP' OR cvterm.name = 'transition' OR cvterm.name = 'transversion' OR cvterm.name = 'pyrimidine_transition' OR cvterm.name = 'purine_transition' OR cvterm.name = 'C_to_T_transition' OR cvterm.name = 'T_to_C_transition' OR cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'A_to_G_transition' OR cvterm.name = 'G_to_A_transition' OR cvterm.name = 'pyrimidine_to_purine_transversion' OR cvterm.name = 'purine_to_pyrimidine_transversion' OR cvterm.name = 'C_to_A_transversion' OR cvterm.name = 'C_to_G_transversion' OR cvterm.name = 'T_to_A_transversion' OR cvterm.name = 'T_to_G_transversion' OR cvterm.name = 'A_to_C_transversion' OR cvterm.name = 'A_to_T_transversion' OR cvterm.name = 'G_to_C_transversion' OR cvterm.name = 'G_to_T_transversion' OR cvterm.name = 'flanking_region' OR cvterm.name = 'repeat_region' OR cvterm.name = 'repeat_unit' OR cvterm.name = 'repeat_component' OR cvterm.name = 'transposable_element_flanking_region' OR cvterm.name = 'five_prime_flanking_region' OR cvterm.name = 'three_prime_flanking_region' OR cvterm.name = 'long_terminal_repeat' OR cvterm.name = 'engineered_foreign_repetitive_element' OR cvterm.name = 'inverted_repeat' OR cvterm.name = 'direct_repeat' OR cvterm.name = 'non_LTR_retrotransposon_polymeric_tract' OR cvterm.name = 'dispersed_repeat' OR cvterm.name = 'tandem_repeat' OR cvterm.name = 'repeat_fragment' OR cvterm.name = 'five_prime_LTR' OR cvterm.name = 'three_prime_LTR' OR cvterm.name = 'solo_LTR' OR cvterm.name = 'terminal_inverted_repeat' OR cvterm.name = 'five_prime_terminal_inverted_repeat' OR cvterm.name = 'three_prime_terminal_inverted_repeat' OR cvterm.name = 'target_site_duplication' OR cvterm.name = 'CRISPR' OR cvterm.name = 'satellite_DNA' OR cvterm.name = 'microsatellite' OR cvterm.name = 'minisatellite' OR cvterm.name = 'dinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'trinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'tetranucleotide_repeat_microsatellite_feature' OR cvterm.name = 'non_LTR_retrotransposon_polymeric_tract' OR cvterm.name = 'LTR_component' OR cvterm.name = 'repeat_fragment' OR cvterm.name = 'U5_LTR_region' OR cvterm.name = 'R_LTR_region' OR cvterm.name = 'U3_LTR_region' OR cvterm.name = 'three_prime_LTR_component' OR cvterm.name = 'five_prime_LTR_component' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'R_three_prime_LTR_region' OR cvterm.name = 'U3_three_prime_LTR_region' OR cvterm.name = 'U5_three_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'region';
> 
> --- ************************************************
> --- *** relation: sequence_secondary_structure ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A folded sequence.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_secondary_structure AS
>   SELECT
>     feature_id AS sequence_secondary_structure_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'G_quartet' OR cvterm.name = 'base_pair' OR cvterm.name = 'RNA_sequence_secondary_structure' OR cvterm.name = 'DNA_sequence_secondary_structure' OR cvterm.name = 'pseudoknot' OR cvterm.name = 'WC_base_pair' OR cvterm.name = 'sugar_edge_base_pair' OR cvterm.name = 'Hoogsteen_base_pair' OR cvterm.name = 'reverse_Hoogsteen_base_pair' OR cvterm.name = 'wobble_base_pair' OR cvterm.name = 'stem_loop' OR cvterm.name = 'tetraloop' OR cvterm.name = 'i_motif' OR cvterm.name = 'recoding_pseudoknot' OR cvterm.name = 'H_pseudoknot' OR cvterm.name = 'sequence_secondary_structure';
> 
> --- ************************************************
> --- *** relation: g_quartet ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** G-quartets are unusual nucleic acid stru ***
> --- *** ctures consisting of a planar arrangemen ***
> --- *** t where each guanine is hydrogen bonded  ***
> --- *** by hoogsteen pairing to another guanine  ***
> --- *** in the quartet.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW g_quartet AS
>   SELECT
>     feature_id AS g_quartet_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'G_quartet';
> 
> --- ************************************************
> --- *** relation: interior_coding_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW interior_coding_exon AS
>   SELECT
>     feature_id AS interior_coding_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'interior_coding_exon';
> 
> --- ************************************************
> --- *** relation: satellite_dna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The many tandem repeats (identical or re ***
> --- *** lated) of a short basic repeating unit;  ***
> --- *** many have a base composition or other pr ***
> --- *** operty different from the genome average ***
> --- ***  that allows them to be separated from t ***
> --- *** he bulk (main band) genomic DNA.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW satellite_dna AS
>   SELECT
>     feature_id AS satellite_dna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'microsatellite' OR cvterm.name = 'minisatellite' OR cvterm.name = 'dinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'trinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'tetranucleotide_repeat_microsatellite_feature' OR cvterm.name = 'satellite_DNA';
> 
> --- ************************************************
> --- *** relation: pcr_product ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region amplified by a PCR reaction.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW pcr_product AS
>   SELECT
>     feature_id AS pcr_product_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RAPD' OR cvterm.name = 'PCR_product';
> 
> --- ************************************************
> --- *** relation: read_pair ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A pair of sequencing reads in which the  ***
> --- *** two members of the pair are related by o ***
> --- *** riginating at either end of a clone inse ***
> --- *** rt.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW read_pair AS
>   SELECT
>     feature_id AS read_pair_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'read_pair';
> 
> --- ************************************************
> --- *** relation: protein_coding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW protein_coding AS
>   SELECT
>     feature_id AS protein_coding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intein_containing' OR cvterm.name = 'protein_coding';
> 
> --- ************************************************
> --- *** relation: non_protein_coding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_protein_coding AS
>   SELECT
>     feature_id AS non_protein_coding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'miRNA_encoding' OR cvterm.name = 'rRNA_encoding' OR cvterm.name = 'scRNA_encoding' OR cvterm.name = 'snoRNA_encoding' OR cvterm.name = 'snRNA_encoding' OR cvterm.name = 'SRP_RNA_encoding' OR cvterm.name = 'stRNA_encoding' OR cvterm.name = 'tmRNA_encoding' OR cvterm.name = 'tRNA_encoding' OR cvterm.name = 'gRNA_encoding' OR cvterm.name = 'C_D_box_snoRNA_encoding' OR cvterm.name = 'H_ACA_box_snoRNA_encoding' OR cvterm.name = 'non_protein_coding';
> 
> --- ************************************************
> --- *** relation: scrna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The primary transcript of any one of sev ***
> --- *** eral small cytoplasmic RNA molecules pre ***
> --- *** sent in the cytoplasm and sometimes nucl ***
> --- *** eus of a eukaryote.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW scrna_primary_transcript AS
>   SELECT
>     feature_id AS scrna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'scRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: scrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Any one of several small cytoplasmic RNA ***
> --- ***  molecules present in the cytoplasm and  ***
> --- *** sometimes nucleus of a eukaryote.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW scrna AS
>   SELECT
>     feature_id AS scrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'scRNA';
> 
> --- ************************************************
> --- *** relation: inr_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters required f ***
> --- *** or the correct positioning of the polyme ***
> --- *** rase for the start of transcription. Ove ***
> --- *** rlaps the TSS. The mammalian consensus s ***
> --- *** equence is YYAN(T|A)YY; the Drosophila c ***
> --- *** onsensus sequence is TCA(G|T)t(T|C). In  ***
> --- *** each the A is at position +1 with respec ***
> --- *** t to the TSS. Functionally similar to th ***
> --- *** e TATA box element.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW inr_motif AS
>   SELECT
>     feature_id AS inr_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'INR_motif';
> 
> --- ************************************************
> --- *** relation: dpe_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters; Positione ***
> --- *** d from +28 to +32 with respect to the TS ***
> --- *** S (+1). Experimental results suggest tha ***
> --- *** t the DPE acts in conjunction with the I ***
> --- *** NR_motif to provide a binding site for T ***
> --- *** FIID in the absence of a TATA box to med ***
> --- *** iate transcription of TATA-less promoter ***
> --- *** s. Consensus sequence (A|G)G(A|T)(C|T)(G ***
> --- *** |A|C).                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW dpe_motif AS
>   SELECT
>     feature_id AS dpe_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DPE_motif';
> 
> --- ************************************************
> --- *** relation: bre_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters, located i ***
> --- *** mmediately upstream of some TATA box ele ***
> --- *** ments at -37 to -32 with respect to the  ***
> --- *** TSS (+1). Consensus sequence is (G|C)(G| ***
> --- *** C)(G|A)CGCC. Binds TFIIB.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW bre_motif AS
>   SELECT
>     feature_id AS bre_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'BRE_motif';
> 
> --- ************************************************
> --- *** relation: pse_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of the ***
> --- ***  promoters of snRNA genes transcribed by ***
> --- ***  RNA polymerase II or by RNA polymerase  ***
> --- *** III. Located between -45 and -60 relativ ***
> --- *** e to the TSS. The human PSE_motif consen ***
> --- *** sus sequence is TCACCNTNA(C|G)TNAAAAG(T| ***
> --- *** G).                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW pse_motif AS
>   SELECT
>     feature_id AS pse_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'PSE_motif';
> 
> --- ************************************************
> --- *** relation: linkage_group ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A group of loci that can be grouped in a ***
> --- ***  linear order representing the different ***
> --- ***  degrees of linkage among the genes conc ***
> --- *** erned.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW linkage_group AS
>   SELECT
>     feature_id AS linkage_group_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linkage_group';
> 
> --- ************************************************
> --- *** relation: rna_internal_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of double stranded RNA where th ***
> --- *** e bases do not conform to WC base pairin ***
> --- *** g. The loop is closed on both sides by c ***
> --- *** anonical base pairing. If the interrupti ***
> --- *** on to base pairing occurs on one strand  ***
> --- *** only, it is known as a bulge.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna_internal_loop AS
>   SELECT
>     feature_id AS rna_internal_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asymmetric_RNA_internal_loop' OR cvterm.name = 'symmetric_RNA_internal_loop' OR cvterm.name = 'K_turn_RNA_motif' OR cvterm.name = 'sarcin_like_RNA_motif' OR cvterm.name = 'RNA_internal_loop';
> 
> --- ************************************************
> --- *** relation: asymmetric_rna_internal_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An internal RNA loop where one of the st ***
> --- *** rands includes more bases than the corre ***
> --- *** sponding region on the other strand.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW asymmetric_rna_internal_loop AS
>   SELECT
>     feature_id AS asymmetric_rna_internal_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'K_turn_RNA_motif' OR cvterm.name = 'sarcin_like_RNA_motif' OR cvterm.name = 'asymmetric_RNA_internal_loop';
> 
> --- ************************************************
> --- *** relation: a_minor_rna_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region forming a motif, composed of ad ***
> --- *** enines, where the minor groove edges are ***
> --- ***  inserted into the minor groove of anoth ***
> --- *** er helix.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW a_minor_rna_motif AS
>   SELECT
>     feature_id AS a_minor_rna_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'A_minor_RNA_motif';
> 
> --- ************************************************
> --- *** relation: k_turn_rna_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The kink turn (K-turn) is an RNA structu ***
> --- *** ral motif that creates a sharp (~120 deg ***
> --- *** ree) bend between two continuous helices ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW k_turn_rna_motif AS
>   SELECT
>     feature_id AS k_turn_rna_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'K_turn_RNA_motif';
> 
> --- ************************************************
> --- *** relation: sarcin_like_rna_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A loop in ribosomal RNA containing the s ***
> --- *** ites of attack for ricin and sarcin.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW sarcin_like_rna_motif AS
>   SELECT
>     feature_id AS sarcin_like_rna_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sarcin_like_RNA_motif';
> 
> --- ************************************************
> --- *** relation: symmetric_rna_internal_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An internal RNA loop where the extent of ***
> --- ***  the loop on both stands is the same siz ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW symmetric_rna_internal_loop AS
>   SELECT
>     feature_id AS symmetric_rna_internal_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'symmetric_RNA_internal_loop';
> 
> --- ************************************************
> --- *** relation: rna_junction_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna_junction_loop AS
>   SELECT
>     feature_id AS rna_junction_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNA_hook_turn' OR cvterm.name = 'RNA_junction_loop';
> 
> --- ************************************************
> --- *** relation: rna_hook_turn ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna_hook_turn AS
>   SELECT
>     feature_id AS rna_hook_turn_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNA_hook_turn';
> 
> --- ************************************************
> --- *** relation: base_pair ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW base_pair AS
>   SELECT
>     feature_id AS base_pair_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'WC_base_pair' OR cvterm.name = 'sugar_edge_base_pair' OR cvterm.name = 'Hoogsteen_base_pair' OR cvterm.name = 'reverse_Hoogsteen_base_pair' OR cvterm.name = 'wobble_base_pair' OR cvterm.name = 'base_pair';
> 
> --- ************************************************
> --- *** relation: wc_base_pair ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The canonical base pair, where two bases ***
> --- ***  interact via WC edges, with glycosidic  ***
> --- *** bonds oriented cis relative to the axis  ***
> --- *** of orientation.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW wc_base_pair AS
>   SELECT
>     feature_id AS wc_base_pair_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'WC_base_pair';
> 
> --- ************************************************
> --- *** relation: sugar_edge_base_pair ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A type of non-canonical base-pairing.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW sugar_edge_base_pair AS
>   SELECT
>     feature_id AS sugar_edge_base_pair_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sugar_edge_base_pair';
> 
> --- ************************************************
> --- *** relation: aptamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** DNA or RNA molecules that have been sele ***
> --- *** cted from random pools based on their ab ***
> --- *** ility to bind other molecules.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW aptamer AS
>   SELECT
>     feature_id AS aptamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DNA_aptamer' OR cvterm.name = 'RNA_aptamer' OR cvterm.name = 'aptamer';
> 
> --- ************************************************
> --- *** relation: dna_aptamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** DNA molecules that have been selected fr ***
> --- *** om random pools based on their ability t ***
> --- *** o bind other molecules.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW dna_aptamer AS
>   SELECT
>     feature_id AS dna_aptamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DNA_aptamer';
> 
> --- ************************************************
> --- *** relation: rna_aptamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** RNA molecules that have been selected fr ***
> --- *** om random pools based on their ability t ***
> --- *** o bind other molecules.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna_aptamer AS
>   SELECT
>     feature_id AS rna_aptamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNA_aptamer';
> 
> --- ************************************************
> --- *** relation: morpholino_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Morpholino oligos are synthesized from f ***
> --- *** our different Morpholino subunits, each  ***
> --- *** of which contains one of the four geneti ***
> --- *** c bases (A, C, G, T) linked to a 6-membe ***
> --- *** red morpholine ring. Eighteen to 25 subu ***
> --- *** nits of these four subunit types are joi ***
> --- *** ned in a specific order by non-ionic pho ***
> --- *** sphorodiamidate intersubunit linkages to ***
> --- ***  give a Morpholino.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW morpholino_oligo AS
>   SELECT
>     feature_id AS morpholino_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'morpholino_oligo';
> 
> --- ************************************************
> --- *** relation: riboswitch ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A riboswitch is a part of an mRNA that c ***
> --- *** an act as a direct sensor of small molec ***
> --- *** ules to control their own expression. A  ***
> --- *** riboswitch is a cis element in the 5' en ***
> --- *** d of an mRNA, that acts as a direct sens ***
> --- *** or of metabolites.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW riboswitch AS
>   SELECT
>     feature_id AS riboswitch_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'riboswitch';
> 
> --- ************************************************
> --- *** relation: matrix_attachment_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA region that is required for the bi ***
> --- *** nding of chromatin to the nuclear matrix ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW matrix_attachment_site AS
>   SELECT
>     feature_id AS matrix_attachment_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'matrix_attachment_site';
> 
> --- ************************************************
> --- *** relation: locus_control_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA region that includes DNAse hyperse ***
> --- *** nsitive sites located 5' to a gene that  ***
> --- *** confers the high-level, position-indepen ***
> --- *** dent, and copy number-dependent expressi ***
> --- *** on to that gene.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW locus_control_region AS
>   SELECT
>     feature_id AS locus_control_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'locus_control_region';
> 
> --- ************************************************
> --- *** relation: match_part ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A part of a match, for example an hsp fr ***
> --- *** om blast is a match_part.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW match_part AS
>   SELECT
>     feature_id AS match_part_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'match_part';
> 
> --- ************************************************
> --- *** relation: genomic_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A clone of a DNA region of a genome.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW genomic_clone AS
>   SELECT
>     feature_id AS genomic_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'genomic_clone';
> 
> --- ************************************************
> --- *** relation: processed_pseudogene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A pseudogene where by an mRNA was retrot ***
> --- *** ransposed. The mRNA sequence is transcri ***
> --- *** bed back into the genome, lacking intron ***
> --- *** s and promotors, but often including a p ***
> --- *** olyA tail.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW processed_pseudogene AS
>   SELECT
>     feature_id AS processed_pseudogene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'processed_pseudogene';
> 
> --- ************************************************
> --- *** relation: pseudogene_by_unequal_crossing_over ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A pseudogene caused by unequal crossing  ***
> --- *** over at recombination.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudogene_by_unequal_crossing_over AS
>   SELECT
>     feature_id AS pseudogene_by_unequal_crossing_over_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pseudogene_by_unequal_crossing_over';
> 
> --- ************************************************
> --- *** relation: probe ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA sequence used experimentally to de ***
> --- *** tect the presence or absence of a comple ***
> --- *** mentary nucleic acid.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW probe AS
>   SELECT
>     feature_id AS probe_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'microarray_oligo' OR cvterm.name = 'probe';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_regulatory_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_variant_effect which changes  ***
> --- *** the regulatory region of a gene.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_regulatory_region AS
>   SELECT
>     feature_id AS sequence_variant_affecting_regulatory_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_regulatory_region';
> 
> --- ************************************************
> --- *** relation: aneuploid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A kind of chromosome variation where the ***
> --- ***  chromosome complement is not an exact m ***
> --- *** ultiple of the haploid number.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW aneuploid AS
>   SELECT
>     feature_id AS aneuploid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'hyperploid' OR cvterm.name = 'hypoploid' OR cvterm.name = 'aneuploid';
> 
> --- ************************************************
> --- *** relation: hyperploid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A kind of chromosome variation where the ***
> --- ***  chromosome complement is not an exact m ***
> --- *** ultiple of the haploid number as extra c ***
> --- *** hromosomes are present.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW hyperploid AS
>   SELECT
>     feature_id AS hyperploid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'hyperploid';
> 
> --- ************************************************
> --- *** relation: hypoploid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A kind of chromosome variation where the ***
> --- ***  chromosome complement is not an exact m ***
> --- *** ultiple of the haploid number as some ch ***
> --- *** romosomes are missing.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW hypoploid AS
>   SELECT
>     feature_id AS hypoploid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'hypoploid';
> 
> --- ************************************************
> --- *** relation: operator ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A regulatory element of an operon to whi ***
> --- *** ch activators or repressors bind thereby ***
> --- ***  effecting translation of genes in that  ***
> --- *** operon.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW operator AS
>   SELECT
>     feature_id AS operator_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'operator';
> 
> --- ************************************************
> --- *** relation: nuclease_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a molecule that binds to a n ***
> --- *** uclease.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW nuclease_binding_site AS
>   SELECT
>     feature_id AS nuclease_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'restriction_enzyme_binding_site' OR cvterm.name = 'nuclease_sensitive_site' OR cvterm.name = 'homing_endonuclease_binding_site' OR cvterm.name = 'nuclease_hypersensitive_site' OR cvterm.name = 'group_1_intron_homing_endonuclease_target_region' OR cvterm.name = 'DNAseI_hypersensitive_site' OR cvterm.name = 'nuclease_binding_site';
> 
> --- ************************************************
> --- *** relation: compound_chromosome_arm ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW compound_chromosome_arm AS
>   SELECT
>     feature_id AS compound_chromosome_arm_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'compound_chromosome_arm';
> 
> --- ************************************************
> --- *** relation: restriction_enzyme_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a molecule that binds to a r ***
> --- *** estriction enzyme.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW restriction_enzyme_binding_site AS
>   SELECT
>     feature_id AS restriction_enzyme_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'restriction_enzyme_binding_site';
> 
> --- ************************************************
> --- *** relation: d_intrachr_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_intrachr_transposition AS
>   SELECT
>     feature_id AS d_intrachr_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deficient_intrachromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: d_interchr_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_interchr_transposition AS
>   SELECT
>     feature_id AS d_interchr_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deficient_interchromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: free_chromosome_arm ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW free_chromosome_arm AS
>   SELECT
>     feature_id AS free_chromosome_arm_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'free_chromosome_arm';
> 
> --- ************************************************
> --- *** relation: gene_to_gene_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_to_gene_feature AS
>   SELECT
>     feature_id AS gene_to_gene_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'overlapping' OR cvterm.name = 'inside_intron' OR cvterm.name = 'five_prime_three_prime_overlap' OR cvterm.name = 'five_prime_five_prime_overlap' OR cvterm.name = 'three_prime_three_prime_overlap' OR cvterm.name = 'three_prime_five_prime_overlap' OR cvterm.name = 'antisense' OR cvterm.name = 'inside_intron_antiparallel' OR cvterm.name = 'inside_intron_parallel' OR cvterm.name = 'gene_to_gene_feature';
> 
> --- ************************************************
> --- *** relation: overlapping ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a gene that has  ***
> --- *** a sequence that overlaps the sequence of ***
> --- ***  another gene.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW overlapping AS
>   SELECT
>     feature_id AS overlapping_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inside_intron' OR cvterm.name = 'five_prime_three_prime_overlap' OR cvterm.name = 'five_prime_five_prime_overlap' OR cvterm.name = 'three_prime_three_prime_overlap' OR cvterm.name = 'three_prime_five_prime_overlap' OR cvterm.name = 'antisense' OR cvterm.name = 'inside_intron_antiparallel' OR cvterm.name = 'inside_intron_parallel' OR cvterm.name = 'overlapping';
> 
> --- ************************************************
> --- *** relation: inside_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a gene when it  ***
> --- *** is located within the intron of another  ***
> --- *** gene.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW inside_intron AS
>   SELECT
>     feature_id AS inside_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inside_intron_antiparallel' OR cvterm.name = 'inside_intron_parallel' OR cvterm.name = 'inside_intron';
> 
> --- ************************************************
> --- *** relation: inside_intron_antiparallel ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a gene when it  ***
> --- *** is located within the intron of another  ***
> --- *** gene and on the opposite strand.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW inside_intron_antiparallel AS
>   SELECT
>     feature_id AS inside_intron_antiparallel_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inside_intron_antiparallel';
> 
> --- ************************************************
> --- *** relation: inside_intron_parallel ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a gene when it  ***
> --- *** is located within the intron of another  ***
> --- *** gene and on the same strand.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW inside_intron_parallel AS
>   SELECT
>     feature_id AS inside_intron_parallel_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inside_intron_parallel';
> 
> --- ************************************************
> --- *** relation: five_prime_three_prime_overlap ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a gene when the ***
> --- ***  five prime region overlaps with another ***
> --- ***  gene's 3' region.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_three_prime_overlap AS
>   SELECT
>     feature_id AS five_prime_three_prime_overlap_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_three_prime_overlap';
> 
> --- ************************************************
> --- *** relation: five_prime_five_prime_overlap ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a gene when the ***
> --- ***  five prime region overlaps with another ***
> --- ***  gene's five prime region.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_five_prime_overlap AS
>   SELECT
>     feature_id AS five_prime_five_prime_overlap_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_five_prime_overlap';
> 
> --- ************************************************
> --- *** relation: three_prime_three_prime_overlap ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a gene when the ***
> --- ***  3' region overlaps with another gene's  ***
> --- *** 3' region.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_three_prime_overlap AS
>   SELECT
>     feature_id AS three_prime_three_prime_overlap_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_three_prime_overlap';
> 
> --- ************************************************
> --- *** relation: three_prime_five_prime_overlap ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a gene when the ***
> --- ***  3' region overlaps with another gene's  ***
> --- *** 5' region.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_five_prime_overlap AS
>   SELECT
>     feature_id AS three_prime_five_prime_overlap_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_five_prime_overlap';
> 
> --- ************************************************
> --- *** relation: antisense ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region sequence that is complementary  ***
> --- *** to a sequence of messenger RNA.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW antisense AS
>   SELECT
>     feature_id AS antisense_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'antisense';
> 
> --- ************************************************
> --- *** relation: polycistronic_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that is polycistronic.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW polycistronic_transcript AS
>   SELECT
>     feature_id AS polycistronic_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dicistronic_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'polycistronic_transcript';
> 
> --- ************************************************
> --- *** relation: dicistronic_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that is dicistronic.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW dicistronic_transcript AS
>   SELECT
>     feature_id AS dicistronic_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_transcript';
> 
> --- ************************************************
> --- *** relation: operon_member ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW operon_member AS
>   SELECT
>     feature_id AS operon_member_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'operon_member';
> 
> --- ************************************************
> --- *** relation: gene_array_member ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_array_member AS
>   SELECT
>     feature_id AS gene_array_member_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'operon_member' OR cvterm.name = 'gene_cassette_member' OR cvterm.name = 'gene_subarray_member' OR cvterm.name = 'member_of_regulon' OR cvterm.name = 'cassette_array_member' OR cvterm.name = 'gene_array_member';
> 
> --- ************************************************
> --- *** relation: macronuclear_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW macronuclear_sequence AS
>   SELECT
>     feature_id AS macronuclear_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'macronuclear_sequence';
> 
> --- ************************************************
> --- *** relation: micronuclear_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW micronuclear_sequence AS
>   SELECT
>     feature_id AS micronuclear_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'micronuclear_sequence';
> 
> --- ************************************************
> --- *** relation: nuclear_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from nuclear sequence.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW nuclear_gene AS
>   SELECT
>     feature_id AS nuclear_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nuclear_gene';
> 
> --- ************************************************
> --- *** relation: mt_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene located in mitochondrial sequence ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW mt_gene AS
>   SELECT
>     feature_id AS mt_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'kinetoplast_gene' OR cvterm.name = 'maxicircle_gene' OR cvterm.name = 'minicircle_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'mt_gene';
> 
> --- ************************************************
> --- *** relation: kinetoplast_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene located in kinetoplast sequence.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW kinetoplast_gene AS
>   SELECT
>     feature_id AS kinetoplast_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'maxicircle_gene' OR cvterm.name = 'minicircle_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'kinetoplast_gene';
> 
> --- ************************************************
> --- *** relation: plastid_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from plastid sequence.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW plastid_gene AS
>   SELECT
>     feature_id AS plastid_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'apicoplast_gene' OR cvterm.name = 'ct_gene' OR cvterm.name = 'chromoplast_gene' OR cvterm.name = 'cyanelle_gene' OR cvterm.name = 'leucoplast_gene' OR cvterm.name = 'proplastid_gene' OR cvterm.name = 'plastid_gene';
> 
> --- ************************************************
> --- *** relation: apicoplast_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from apicoplast sequence.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW apicoplast_gene AS
>   SELECT
>     feature_id AS apicoplast_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'apicoplast_gene';
> 
> --- ************************************************
> --- *** relation: ct_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from chloroplast sequence.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW ct_gene AS
>   SELECT
>     feature_id AS ct_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ct_gene';
> 
> --- ************************************************
> --- *** relation: chromoplast_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from chromoplast_sequence.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromoplast_gene AS
>   SELECT
>     feature_id AS chromoplast_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromoplast_gene';
> 
> --- ************************************************
> --- *** relation: cyanelle_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from cyanelle sequence.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW cyanelle_gene AS
>   SELECT
>     feature_id AS cyanelle_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cyanelle_gene';
> 
> --- ************************************************
> --- *** relation: leucoplast_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A plastid gene from leucoplast sequence. ***
> --- ************************************************
> ---
> 
> CREATE VIEW leucoplast_gene AS
>   SELECT
>     feature_id AS leucoplast_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'leucoplast_gene';
> 
> --- ************************************************
> --- *** relation: proplastid_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from proplastid sequence.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW proplastid_gene AS
>   SELECT
>     feature_id AS proplastid_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'proplastid_gene';
> 
> --- ************************************************
> --- *** relation: nucleomorph_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from nucleomorph sequence.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW nucleomorph_gene AS
>   SELECT
>     feature_id AS nucleomorph_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nucleomorph_gene';
> 
> --- ************************************************
> --- *** relation: plasmid_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from plasmid sequence.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW plasmid_gene AS
>   SELECT
>     feature_id AS plasmid_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plasmid_gene';
> 
> --- ************************************************
> --- *** relation: proviral_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene from proviral sequence.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW proviral_gene AS
>   SELECT
>     feature_id AS proviral_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'endogenous_retroviral_gene' OR cvterm.name = 'proviral_gene';
> 
> --- ************************************************
> --- *** relation: endogenous_retroviral_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A proviral gene with origin endogenous r ***
> --- *** etrovirus.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW endogenous_retroviral_gene AS
>   SELECT
>     feature_id AS endogenous_retroviral_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'endogenous_retroviral_gene';
> 
> --- ************************************************
> --- *** relation: transposable_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transposon or insertion sequence. An e ***
> --- *** lement that can insert in a variety of D ***
> --- *** NA sequences.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW transposable_element AS
>   SELECT
>     feature_id AS transposable_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'retrotransposon' OR cvterm.name = 'DNA_transposon' OR cvterm.name = 'foreign_transposable_element' OR cvterm.name = 'transgenic_transposable_element' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'transposon_fragment' OR cvterm.name = 'LTR_retrotransposon' OR cvterm.name = 'non_LTR_retrotransposon' OR cvterm.name = 'RR_tract' OR cvterm.name = 'LINE_element' OR cvterm.name = 'SINE_element' OR cvterm.name = 'terminal_inverted_repeat_element' OR cvterm.name = 'foldback_element' OR cvterm.name = 'conjugative_transposon' OR cvterm.name = 'helitron' OR cvterm.name = 'MITE' OR cvterm.name = 'insertion_sequence' OR cvterm.name = 'polinton' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'transposable_element';
> 
> --- ************************************************
> --- *** relation: expressed_sequence_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A match to an EST or cDNA sequence.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW expressed_sequence_match AS
>   SELECT
>     feature_id AS expressed_sequence_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'EST_match' OR cvterm.name = 'cDNA_match' OR cvterm.name = 'UST_match' OR cvterm.name = 'RST_match' OR cvterm.name = 'expressed_sequence_match';
> 
> --- ************************************************
> --- *** relation: clone_insert_end ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The end of the clone insert.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW clone_insert_end AS
>   SELECT
>     feature_id AS clone_insert_end_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'clone_insert_end';
> 
> --- ************************************************
> --- *** relation: polypeptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence of amino acids linked by pept ***
> --- *** ide bonds which may lack appreciable ter ***
> --- *** tiary structure and may not be liable to ***
> --- ***  irreversible denaturation.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide AS
>   SELECT
>     feature_id AS polypeptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide';
> 
> --- ************************************************
> --- *** relation: chromosome_arm ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of the chromosome between the c ***
> --- *** entromere and the telomere. Human chromo ***
> --- *** somes have two arms, the p arm (short) a ***
> --- *** nd the q arm (long) which are separated  ***
> --- *** from each other by the centromere.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome_arm AS
>   SELECT
>     feature_id AS chromosome_arm_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromosome_arm';
> 
> --- ************************************************
> --- *** relation: sequencing_primer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequencing_primer AS
>   SELECT
>     feature_id AS sequencing_primer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequencing_primer';
> 
> --- ************************************************
> --- *** relation: mrna_with_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA with a frameshift.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna_with_frameshift AS
>   SELECT
>     feature_id AS mrna_with_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_with_minus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_2_frameshift' OR cvterm.name = 'mRNA_with_minus_2_frameshift' OR cvterm.name = 'mRNA_with_frameshift';
> 
> --- ************************************************
> --- *** relation: sequence_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An extent of biological sequence.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_feature AS
>   SELECT
>     feature_id AS sequence_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'region' OR cvterm.name = 'junction' OR cvterm.name = 'sequence_alteration' OR cvterm.name = 'biomaterial_region' OR cvterm.name = 'experimental_feature' OR cvterm.name = 'biological_region' OR cvterm.name = 'topologically_defined_region' OR cvterm.name = 'reagent' OR cvterm.name = 'engineered_region' OR cvterm.name = 'PCR_product' OR cvterm.name = 'clone' OR cvterm.name = 'rescue_region' OR cvterm.name = 'oligo' OR cvterm.name = 'clone_insert' OR cvterm.name = 'cloned_region' OR cvterm.name = 'databank_entry' OR cvterm.name = 'RAPD' OR cvterm.name = 'genomic_clone' OR cvterm.name = 'cDNA_clone' OR cvterm.name = 'tiling_path_clone' OR cvterm.name = 'validated_cDNA_clone' OR cvterm.name = 'invalidated_cDNA_clone' OR cvterm.name = 'three_prime_RACE_clone' OR cvterm.name = 'chimeric_cDNA_clone' OR cvterm.name = 'genomically_contaminated_cDNA_clone' OR cvterm.name = 'polyA_primed_cDNA_clone' OR cvterm.name = 'partially_processed_cDNA_clone' OR cvterm.name = 'engineered_rescue_region' OR cvterm.name = 'aptamer' OR cvterm.name = 'probe' OR cvterm.name = 'tag' OR cvterm.name = 'ss_oligo' OR cvterm.name = 'ds_oligo' OR cvterm.name = 'DNAzyme' OR cvterm.name = 'synthetic_oligo' OR cvterm.name = 'DNA_aptamer' OR cvterm.name = 'RNA_aptamer' OR cvterm.name = 'microarray_oligo' OR cvterm.name = 'SAGE_tag' OR cvterm.name = 'STS' OR cvterm.name = 'EST' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'five_prime_EST' OR cvterm.name = 'three_prime_EST' OR cvterm.name = 'UST' OR cvterm.name = 'RST' OR cvterm.name = 'three_prime_UST' OR cvterm.name = 'five_prime_UST' OR cvterm.name = 'three_prime_RST' OR cvterm.name = 'five_prime_RST' OR cvterm.name = 'primer' OR cvterm.name = 'sequencing_primer' OR cvterm.name = 'forward_primer' OR cvterm.name = 'reverse_primer' OR cvterm.name = 'RNAi_reagent' OR cvterm.name = 'DNA_constraint_sequence' OR cvterm.name = 'morpholino_oligo' OR cvterm.name = 'PNA_oligo' OR cvterm.name = 'LNA_oligo' OR cvterm.name = 'TNA_oligo' OR cvterm.name = 'GNA_oligo' OR cvterm.name = 'R_GNA_oligo' OR cvterm.name = 'S_GNA_oligo' OR cvterm.name = 'cloned_cDNA_insert' OR cvterm.name = 'cloned_genomic_insert' OR cvterm.name = 'engineered_insert' OR cvterm.name = 'BAC_cloned_genomic_insert' OR cvterm.name = 'engineered_gene' OR cvterm.name = 'engineered_plasmid' OR cvterm.name = 'engineered_rescue_region' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'engineered_foreign_region' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'engineered_insert' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_repetitive_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'match_part' OR cvterm.name = 'assembly_component' OR cvterm.name = 'conserved_region' OR cvterm.name = 'match' OR cvterm.name = 'remark' OR cvterm.name = 'reading_frame' OR cvterm.name = 'QTL' OR cvterm.name = 'consensus_region' OR cvterm.name = 'low_complexity_region' OR cvterm.name = 'assembly' OR cvterm.name = 'transcribed_fragment' OR cvterm.name = 'transcribed_cluster' OR cvterm.name = 'read_pair' OR cvterm.name = 'contig' OR cvterm.name = 'read' OR cvterm.name = 'restriction_fragment' OR cvterm.name = 'golden_path_fragment' OR cvterm.name = 'tiling_path_fragment' OR cvterm.name = 'gap' OR cvterm.name = 'sonicate_fragment' OR cvterm.name = 'contig_read' OR cvterm.name = 'BAC_end' OR cvterm.name = 'dye_terminator_read' OR cvterm.name = 'pyrosequenced_read' OR cvterm.name = 'ligation_based_read' OR cvterm.name = 'polymerase_synthesis_read' OR cvterm.name = 'PAC_end' OR cvterm.name = 'RFLP_fragment' OR cvterm.name = 'tiling_path_clone' OR cvterm.name = 'coding_conserved_region' OR cvterm.name = 'nc_conserved_region' OR cvterm.name = 'homologous_region' OR cvterm.name = 'syntenic_region' OR cvterm.name = 'paralogous_region' OR cvterm.name = 'orthologous_region' OR cvterm.name = 'nucleotide_match' OR cvterm.name = 'protein_match' OR cvterm.name = 'expressed_sequence_match' OR cvterm.name = 'cross_genome_match' OR cvterm.name = 'translated_nucleotide_match' OR cvterm.name = 'primer_match' OR cvterm.name = 'EST_match' OR cvterm.name = 'cDNA_match' OR cvterm.name = 'UST_match' OR cvterm.name = 'RST_match' OR cvterm.name = 'sequence_difference' OR cvterm.name = 'experimental_result_region' OR cvterm.name = 'polypeptide_sequencing_information' OR cvterm.name = 'possible_base_call_error' OR cvterm.name = 'possible_assembly_error' OR cvterm.name = 'overlapping_feature_set' OR cvterm.name = 'no_output' OR cvterm.name = 'overlapping_EST_set' OR cvterm.name = 'non_adjacent_residues' OR cvterm.name = 'non_terminal_residue' OR cvterm.name = 'sequence_conflict' OR cvterm.name = 'sequence_uncertainty' OR cvterm.name = 'ORF' OR cvterm.name = 'blocked_reading_frame' OR cvterm.name = 'mini_gene' OR cvterm.name = 'rescue_mini_gene' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'sequence_assembly' OR cvterm.name = 'fragment_assembly' OR cvterm.name = 'supercontig' OR cvterm.name = 'contig' OR cvterm.name = 'tiling_path' OR cvterm.name = 'virtual_sequence' OR cvterm.name = 'golden_path' OR cvterm.name = 'ultracontig' OR cvterm.name = 'expressed_sequence_assembly' OR cvterm.name = 'fingerprint_map' OR cvterm.name = 'STS_map' OR cvterm.name = 'RH_map' OR cvterm.name = 'unigene_cluster' OR cvterm.name = 'sequence_secondary_structure' OR cvterm.name = 'linkage_group' OR cvterm.name = 'polypeptide' OR cvterm.name = 'deletion' OR cvterm.name = 'origin_of_replication' OR cvterm.name = 'recombination_feature' OR cvterm.name = 'CpG_island' OR cvterm.name = 'binding_site' OR cvterm.name = 'pseudogenic_region' OR cvterm.name = 'cap' OR cvterm.name = 'intergenic_region' OR cvterm.name = 'oligo_U_tail' OR cvterm.name = 'polyA_sequence' OR cvterm.name = 'insertion' OR cvterm.name = 'gene' OR cvterm.name = 'nucleotide_motif' OR cvterm.name = 'chromosome_part' OR cvterm.name = 'gene_member_region' OR cvterm.name = 'transcript_region' OR cvterm.name = 'polypeptide_region' OR cvterm.name = 'gene_component_region' OR cvterm.name = 'mobile_genetic_element' OR cvterm.name = 'replicon' OR cvterm.name = 'base' OR cvterm.name = 'amino_acid' OR cvterm.name = 'gene_group' OR cvterm.name = 'substitution' OR cvterm.name = 'inversion' OR cvterm.name = 'retron' OR cvterm.name = 'G_quartet' OR cvterm.name = 'base_pair' OR cvterm.name = 'RNA_sequence_secondary_structure' OR cvterm.name = 'DNA_sequence_secondary_structure' OR cvterm.name = 'pseudoknot' OR cvterm.name = 'WC_base_pair' OR cvterm.name = 'sugar_edge_base_pair' OR cvterm.name = 'Hoogsteen_base_pair' OR cvterm.name = 'reverse_Hoogsteen_base_pair' OR cvterm.name = 'wobble_base_pair' OR cvterm.name = 'stem_loop' OR cvterm.name = 'tetraloop' OR cvterm.name = 'i_motif' OR cvterm.name = 'recoding_pseudoknot' OR cvterm.name = 'H_pseudoknot' OR cvterm.name = 'D_loop' OR cvterm.name = 'ARS' OR cvterm.name = 'oriT' OR cvterm.name = 'amplification_origin' OR cvterm.name = 'oriV' OR cvterm.name = 'oriC' OR cvterm.name = 'recombination_hotspot' OR cvterm.name = 'haplotype_block' OR cvterm.name = 'sequence_rearrangement_feature' OR cvterm.name = 'iDNA' OR cvterm.name = 'specific_recombination_site' OR cvterm.name = 'chromosome_breakage_sequence' OR cvterm.name = 'internal_eliminated_sequence' OR cvterm.name = 'macronucleus_destined_segment' OR cvterm.name = 'recombination_feature_of_rearranged_gene' OR cvterm.name = 'site_specific_recombination_target_region' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_feature' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_spacer' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_signal_feature' OR cvterm.name = 'D_gene' OR cvterm.name = 'V_gene' OR cvterm.name = 'J_gene' OR cvterm.name = 'C_gene' OR cvterm.name = 'D_J_C_cluster' OR cvterm.name = 'J_C_cluster' OR cvterm.name = 'J_cluster' OR cvterm.name = 'V_cluster' OR cvterm.name = 'V_J_cluster' OR cvterm.name = 'V_J_C_cluster' OR cvterm.name = 'C_cluster' OR cvterm.name = 'D_cluster' OR cvterm.name = 'D_J_cluster' OR cvterm.name = 'three_prime_D_spacer' OR cvterm.name = 'five_prime_D_spacer' OR cvterm.name = 'J_spacer' OR cvterm.name = 'V_spacer' OR cvterm.name = 'VD_gene' OR cvterm.name = 'DJ_gene' OR cvterm.name = 'VDJ_gene' OR cvterm.name = 'VJ_gene' OR cvterm.name = 'DJ_J_cluster' OR cvterm.name = 'VDJ_J_C_cluster' OR cvterm.name = 'VDJ_J_cluster' OR cvterm.name = 'VJ_C_cluster' OR cvterm.name = 'VJ_J_C_cluster' OR cvterm.name = 'VJ_J_cluster' OR cvterm.name = 'D_DJ_C_cluster' OR cvterm.name = 'D_DJ_cluster' OR cvterm.name = 'D_DJ_J_C_cluster' OR cvterm.name = 'D_DJ_J_cluster' OR cvterm.name = 'V_DJ_cluster' OR cvterm.name = 'V_DJ_J_cluster' OR cvterm.name = 'V_VDJ_C_cluster' OR cvterm.name = 'V_VDJ_cluster' OR cvterm.name = 'V_VDJ_J_cluster' OR cvterm.name = 'V_VJ_C_cluster' OR cvterm.name = 'V_VJ_cluster' OR cvterm.name = 'V_VJ_J_cluster' OR cvterm.name = 'V_D_DJ_C_cluster' OR cvterm.name = 'V_D_DJ_cluster' OR cvterm.name = 'V_D_DJ_J_C_cluster' OR cvterm.name = 'V_D_DJ_J_cluster' OR cvterm.name = 'V_D_J_C_cluster' OR cvterm.name = 'V_D_J_cluster' OR cvterm.name = 'DJ_C_cluster' OR cvterm.name = 'DJ_J_C_cluster' OR cvterm.name = 'VDJ_C_cluster' OR cvterm.name = 'V_DJ_C_cluster' OR cvterm.name = 'V_DJ_J_C_cluster' OR cvterm.name = 'V_VDJ_J_C_cluster' OR cvterm.name = 'V_VJ_J_C_cluster' OR cvterm.name = 'J_gene_recombination_feature' OR cvterm.name = 'D_gene_recombination_feature' OR cvterm.name = 'V_gene_recombination_feature' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'integration_excision_site' OR cvterm.name = 'resolution_site' OR cvterm.name = 'inversion_site' OR cvterm.name = 'inversion_site_part' OR cvterm.name = 'attI_site' OR cvterm.name = 'attP_site' OR cvterm.name = 'attB_site' OR cvterm.name = 'attL_site' OR cvterm.name = 'attR_site' OR cvterm.name = 'attC_site' OR cvterm.name = 'attCtn_site' OR cvterm.name = 'loxP_site' OR cvterm.name = 'dif_site' OR cvterm.name = 'FRT_site' OR cvterm.name = 'IRLinv_site' OR cvterm.name = 'IRRinv_site' OR cvterm.name = 'protein_binding_site' OR cvterm.name = 'miRNA_target_site' OR cvterm.name = 'epitope' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'DNA_binding_site' OR cvterm.name = 'primer_binding_site' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'nuclease_binding_site' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'histone_binding_site' OR cvterm.name = 'insulator_binding_site' OR cvterm.name = 'enhancer_binding_site' OR cvterm.name = 'restriction_enzyme_binding_site' OR cvterm.name = 'nuclease_sensitive_site' OR cvterm.name = 'homing_endonuclease_binding_site' OR cvterm.name = 'nuclease_hypersensitive_site' OR cvterm.name = 'group_1_intron_homing_endonuclease_target_region' OR cvterm.name = 'DNAseI_hypersensitive_site' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'pseudogene' OR cvterm.name = 'decayed_exon' OR cvterm.name = 'pseudogenic_exon' OR cvterm.name = 'pseudogenic_transcript' OR cvterm.name = 'pseudogenic_rRNA' OR cvterm.name = 'pseudogenic_tRNA' OR cvterm.name = 'processed_pseudogene' OR cvterm.name = 'pseudogene_by_unequal_crossing_over' OR cvterm.name = 'nuclear_mt_pseudogene' OR cvterm.name = 'cassette_pseudogene' OR cvterm.name = 'transgenic_insertion' OR cvterm.name = 'nuclear_gene' OR cvterm.name = 'mt_gene' OR cvterm.name = 'plastid_gene' OR cvterm.name = 'nucleomorph_gene' OR cvterm.name = 'plasmid_gene' OR cvterm.name = 'proviral_gene' OR cvterm.name = 'transposable_element_gene' OR cvterm.name = 'silenced_gene' OR cvterm.name = 'engineered_gene' OR cvterm.name = 'foreign_gene' OR cvterm.name = 'fusion_gene' OR cvterm.name = 'recombinationally_rearranged_gene' OR cvterm.name = 'gene_with_trans_spliced_transcript' OR cvterm.name = 'gene_with_polycistronic_transcript' OR cvterm.name = 'rescue_gene' OR cvterm.name = 'post_translationally_regulated_gene' OR cvterm.name = 'negatively_autoregulated_gene' OR cvterm.name = 'positively_autoregulated_gene' OR cvterm.name = 'translationally_regulated_gene' OR cvterm.name = 'epigenetically_modified_gene' OR cvterm.name = 'transgene' OR cvterm.name = 'predicted_gene' OR cvterm.name = 'protein_coding_gene' OR cvterm.name = 'retrogene' OR cvterm.name = 'ncRNA_gene' OR cvterm.name = 'cryptic_gene' OR cvterm.name = 'gene_cassette' OR cvterm.name = 'kinetoplast_gene' OR cvterm.name = 'maxicircle_gene' OR cvterm.name = 'minicircle_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'apicoplast_gene' OR cvterm.name = 'ct_gene' OR cvterm.name = 'chromoplast_gene' OR cvterm.name = 'cyanelle_gene' OR cvterm.name = 'leucoplast_gene' OR cvterm.name = 'proplastid_gene' OR cvterm.name = 'endogenous_retroviral_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'gene_silenced_by_DNA_modification' OR cvterm.name = 'gene_silenced_by_RNA_interference' OR cvterm.name = 'gene_silenced_by_histone_modification' OR cvterm.name = 'gene_silenced_by_DNA_methylation' OR cvterm.name = 'gene_silenced_by_histone_methylation' OR cvterm.name = 'gene_silenced_by_histone_deacetylation' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'recombinationally_inverted_gene' OR cvterm.name = 'recombinationally_rearranged_vertebrate_immune_system_gene' OR cvterm.name = 'gene_with_dicistronic_transcript' OR cvterm.name = 'gene_with_dicistronic_primary_transcript' OR cvterm.name = 'gene_with_dicistronic_mRNA' OR cvterm.name = 'wild_type_rescue_gene' OR cvterm.name = 'gene_rearranged_at_DNA_level' OR cvterm.name = 'maternally_imprinted_gene' OR cvterm.name = 'paternally_imprinted_gene' OR cvterm.name = 'allelically_excluded_gene' OR cvterm.name = 'floxed_gene' OR cvterm.name = 'gene_with_polyadenylated_mRNA' OR cvterm.name = 'gene_with_mRNA_with_frameshift' OR cvterm.name = 'gene_with_edited_transcript' OR cvterm.name = 'gene_with_recoded_mRNA' OR cvterm.name = 'gene_with_stop_codon_read_through' OR cvterm.name = 'gene_with_mRNA_recoded_by_translational_bypass' OR cvterm.name = 'gene_with_transcript_with_translational_frameshift' OR cvterm.name = 'gene_with_stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'gene_with_stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'gRNA_gene' OR cvterm.name = 'miRNA_gene' OR cvterm.name = 'scRNA_gene' OR cvterm.name = 'snoRNA_gene' OR cvterm.name = 'snRNA_gene' OR cvterm.name = 'SRP_RNA_gene' OR cvterm.name = 'stRNA_gene' OR cvterm.name = 'tmRNA_gene' OR cvterm.name = 'tRNA_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'DNA_motif' OR cvterm.name = 'RNA_motif' OR cvterm.name = 'PSE_motif' OR cvterm.name = 'GC_rich_promoter_region' OR cvterm.name = 'minus_10_signal' OR cvterm.name = 'minus_35_signal' OR cvterm.name = 'DMv4_motif' OR cvterm.name = 'DMv5_motif' OR cvterm.name = 'DMv3_motif' OR cvterm.name = 'DMv2_motif' OR cvterm.name = 'DPE1_motif' OR cvterm.name = 'DMv1_motif' OR cvterm.name = 'NDM2_motif' OR cvterm.name = 'NDM3_motif' OR cvterm.name = 'RNA_internal_loop' OR cvterm.name = 'A_minor_RNA_motif' OR cvterm.name = 'RNA_junction_loop' OR cvterm.name = 'hammerhead_ribozyme' OR cvterm.name = 'asymmetric_RNA_internal_loop' OR cvterm.name = 'symmetric_RNA_internal_loop' OR cvterm.name = 'K_turn_RNA_motif' OR cvterm.name = 'sarcin_like_RNA_motif' OR cvterm.name = 'RNA_hook_turn' OR cvterm.name = 'chromosome_arm' OR cvterm.name = 'chromosome_band' OR cvterm.name = 'interband' OR cvterm.name = 'chromosomal_regulatory_element' OR cvterm.name = 'chromosomal_structural_element' OR cvterm.name = 'introgressed_chromosome_region' OR cvterm.name = 'matrix_attachment_site' OR cvterm.name = 'centromere' OR cvterm.name = 'telomere' OR cvterm.name = 'transcript' OR cvterm.name = 'regulatory_region' OR cvterm.name = 'polycistronic_transcript' OR cvterm.name = 'transcript_with_translational_frameshift' OR cvterm.name = 'primary_transcript' OR cvterm.name = 'mature_transcript' OR cvterm.name = 'transcript_bound_by_nucleic_acid' OR cvterm.name = 'transcript_bound_by_protein' OR cvterm.name = 'enzymatic_RNA' OR cvterm.name = 'trans_spliced_transcript' OR cvterm.name = 'monocistronic_transcript' OR cvterm.name = 'aberrant_processed_transcript' OR cvterm.name = 'edited_transcript' OR cvterm.name = 'alternatively_spliced_transcript' OR cvterm.name = 'dicistronic_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'protein_coding_primary_transcript' OR cvterm.name = 'nc_primary_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'mini_exon_donor_RNA' OR cvterm.name = 'antisense_primary_transcript' OR cvterm.name = 'capped_primary_transcript' OR cvterm.name = 'pre_edited_mRNA' OR cvterm.name = 'scRNA_primary_transcript' OR cvterm.name = 'rRNA_primary_transcript' OR cvterm.name = 'tRNA_primary_transcript' OR cvterm.name = 'snRNA_primary_transcript' OR cvterm.name = 'snoRNA_primary_transcript' OR cvterm.name = 'tmRNA_primary_transcript' OR cvterm.name = 'SRP_RNA_primary_transcript' OR cvterm.name = 'miRNA_primary_transcript' OR cvterm.name = 'rRNA_small_subunit_primary_transcript' OR cvterm.name = 'rRNA_large_subunit_primary_transcript' OR cvterm.name = 'alanine_tRNA_primary_transcript' OR cvterm.name = 'arginine_tRNA_primary_transcript' OR cvterm.name = 'asparagine_tRNA_primary_transcript' OR cvterm.name = 'aspartic_acid_tRNA_primary_transcript' OR cvterm.name = 'cysteine_tRNA_primary_transcript' OR cvterm.name = 'glutamic_acid_tRNA_primary_transcript' OR cvterm.name = 'glutamine_tRNA_primary_transcript' OR cvterm.name = 'glycine_tRNA_primary_transcript' OR cvterm.name = 'histidine_tRNA_primary_transcript' OR cvterm.name = 'isoleucine_tRNA_primary_transcript' OR cvterm.name = 'leucine_tRNA_primary_transcript' OR cvterm.name = 'lysine_tRNA_primary_transcript' OR cvterm.name = 'methionine_tRNA_primary_transcript' OR cvterm.name = 'phenylalanine_tRNA_primary_transcript' OR cvterm.name = 'proline_tRNA_primary_transcript' OR cvterm.name = 'serine_tRNA_primary_transcript' OR cvterm.name = 'threonine_tRNA_primary_transcript' OR cvterm.name = 'tryptophan_tRNA_primary_transcript' OR cvterm.name = 'tyrosine_tRNA_primary_transcript' OR cvterm.name = 'valine_tRNA_primary_transcript' OR cvterm.name = 'pyrrolysine_tRNA_primary_transcript' OR cvterm.name = 'selenocysteine_tRNA_primary_transcript' OR cvterm.name = 'methylation_guide_snoRNA_primary_transcript' OR cvterm.name = 'rRNA_cleavage_snoRNA_primary_transcript' OR cvterm.name = 'C_D_box_snoRNA_primary_transcript' OR cvterm.name = 'H_ACA_box_snoRNA_primary_transcript' OR cvterm.name = 'U14_snoRNA_primary_transcript' OR cvterm.name = 'stRNA_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'mRNA' OR cvterm.name = 'ncRNA' OR cvterm.name = 'mRNA_with_frameshift' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'exemplar_mRNA' OR cvterm.name = 'capped_mRNA' OR cvterm.name = 'polyadenylated_mRNA' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'recoded_mRNA' OR cvterm.name = 'mRNA_with_minus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_2_frameshift' OR cvterm.name = 'mRNA_with_minus_2_frameshift' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'mRNA_recoded_by_translational_bypass' OR cvterm.name = 'mRNA_recoded_by_codon_redefinition' OR cvterm.name = 'scRNA' OR cvterm.name = 'rRNA' OR cvterm.name = 'tRNA' OR cvterm.name = 'snRNA' OR cvterm.name = 'snoRNA' OR cvterm.name = 'small_regulatory_ncRNA' OR cvterm.name = 'RNase_MRP_RNA' OR cvterm.name = 'RNase_P_RNA' OR cvterm.name = 'telomerase_RNA' OR cvterm.name = 'vault_RNA' OR cvterm.name = 'Y_RNA' OR cvterm.name = 'rasiRNA' OR cvterm.name = 'SRP_RNA' OR cvterm.name = 'guide_RNA' OR cvterm.name = 'antisense_RNA' OR cvterm.name = 'siRNA' OR cvterm.name = 'stRNA' OR cvterm.name = 'class_II_RNA' OR cvterm.name = 'class_I_RNA' OR cvterm.name = 'piRNA' OR cvterm.name = 'lincRNA' OR cvterm.name = 'rRNA_cleavage_RNA' OR cvterm.name = 'small_subunit_rRNA' OR cvterm.name = 'large_subunit_rRNA' OR cvterm.name = 'rRNA_18S' OR cvterm.name = 'rRNA_16S' OR cvterm.name = 'rRNA_5_8S' OR cvterm.name = 'rRNA_5S' OR cvterm.name = 'rRNA_28S' OR cvterm.name = 'rRNA_23S' OR cvterm.name = 'rRNA_25S' OR cvterm.name = 'rRNA_21S' OR cvterm.name = 'alanyl_tRNA' OR cvterm.name = 'asparaginyl_tRNA' OR cvterm.name = 'aspartyl_tRNA' OR cvterm.name = 'cysteinyl_tRNA' OR cvterm.name = 'glutaminyl_tRNA' OR cvterm.name = 'glutamyl_tRNA' OR cvterm.name = 'glycyl_tRNA' OR cvterm.name = 'histidyl_tRNA' OR cvterm.name = 'isoleucyl_tRNA' OR cvterm.name = 'leucyl_tRNA' OR cvterm.name = 'lysyl_tRNA' OR cvterm.name = 'methionyl_tRNA' OR cvterm.name = 'phenylalanyl_tRNA' OR cvterm.name = 'prolyl_tRNA' OR cvterm.name = 'seryl_tRNA' OR cvterm.name = 'threonyl_tRNA' OR cvterm.name = 'tryptophanyl_tRNA' OR cvterm.name = 'tyrosyl_tRNA' OR cvterm.name = 'valyl_tRNA' OR cvterm.name = 'pyrrolysyl_tRNA' OR cvterm.name = 'arginyl_tRNA' OR cvterm.name = 'selenocysteinyl_tRNA' OR cvterm.name = 'U1_snRNA' OR cvterm.name = 'U2_snRNA' OR cvterm.name = 'U4_snRNA' OR cvterm.name = 'U4atac_snRNA' OR cvterm.name = 'U5_snRNA' OR cvterm.name = 'U6_snRNA' OR cvterm.name = 'U6atac_snRNA' OR cvterm.name = 'U11_snRNA' OR cvterm.name = 'U12_snRNA' OR cvterm.name = 'C_D_box_snoRNA' OR cvterm.name = 'H_ACA_box_snoRNA' OR cvterm.name = 'U14_snoRNA' OR cvterm.name = 'U3_snoRNA' OR cvterm.name = 'methylation_guide_snoRNA' OR cvterm.name = 'pseudouridylation_guide_snoRNA' OR cvterm.name = 'miRNA' OR cvterm.name = 'RNA_6S' OR cvterm.name = 'CsrB_RsmB_RNA' OR cvterm.name = 'DsrA_RNA' OR cvterm.name = 'OxyS_RNA' OR cvterm.name = 'RprA_RNA' OR cvterm.name = 'RRE_RNA' OR cvterm.name = 'spot_42_RNA' OR cvterm.name = 'tmRNA' OR cvterm.name = 'GcvB_RNA' OR cvterm.name = 'MicF_RNA' OR cvterm.name = 'ribozyme' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'edited_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'attenuator' OR cvterm.name = 'terminator' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'polyA_signal_sequence' OR cvterm.name = 'gene_group_regulatory_region' OR cvterm.name = 'transcriptional_cis_regulatory_region' OR cvterm.name = 'splicing_regulatory_region' OR cvterm.name = 'cis_regulatory_frameshift_element' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'eukaryotic_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'terminator_of_type_2_RNApol_III_promoter' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'operator' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'promoter' OR cvterm.name = 'insulator' OR cvterm.name = 'CRM' OR cvterm.name = 'promoter_targeting_sequence' OR cvterm.name = 'bidirectional_promoter' OR cvterm.name = 'RNA_polymerase_promoter' OR cvterm.name = 'RNApol_I_promoter' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'Phage_RNA_Polymerase_Promoter' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'SP6_RNA_Polymerase_Promoter' OR cvterm.name = 'T3_RNA_Polymerase_Promoter' OR cvterm.name = 'T7_RNA_Polymerase_Promoter' OR cvterm.name = 'locus_control_region' OR cvterm.name = 'enhancer' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'silencer' OR cvterm.name = 'enhancer_bound_by_factor' OR cvterm.name = 'shadow_enhancer' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'splice_enhancer' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'exonic_splice_enhancer' OR cvterm.name = 'exon' OR cvterm.name = 'edited_transcript_feature' OR cvterm.name = 'mature_transcript_region' OR cvterm.name = 'primary_transcript_region' OR cvterm.name = 'exon_region' OR cvterm.name = 'anchor_binding_site' OR cvterm.name = 'coding_exon' OR cvterm.name = 'noncoding_exon' OR cvterm.name = 'interior_exon' OR cvterm.name = 'exon_of_single_exon_gene' OR cvterm.name = 'interior_coding_exon' OR cvterm.name = 'five_prime_coding_exon' OR cvterm.name = 'three_prime_coding_exon' OR cvterm.name = 'three_prime_noncoding_exon' OR cvterm.name = 'five_prime_noncoding_exon' OR cvterm.name = 'pre_edited_region' OR cvterm.name = 'editing_block' OR cvterm.name = 'editing_domain' OR cvterm.name = 'unedited_region' OR cvterm.name = 'mRNA_region' OR cvterm.name = 'tmRNA_region' OR cvterm.name = 'guide_RNA_region' OR cvterm.name = 'tRNA_region' OR cvterm.name = 'riboswitch' OR cvterm.name = 'UTR' OR cvterm.name = 'CDS' OR cvterm.name = 'codon' OR cvterm.name = 'five_prime_open_reading_frame' OR cvterm.name = 'UTR_region' OR cvterm.name = 'CDS_region' OR cvterm.name = 'translational_frameshift' OR cvterm.name = 'recoding_stimulatory_region' OR cvterm.name = 'five_prime_UTR' OR cvterm.name = 'three_prime_UTR' OR cvterm.name = 'internal_UTR' OR cvterm.name = 'untranslated_region_polycistronic_mRNA' OR cvterm.name = 'edited_CDS' OR cvterm.name = 'CDS_fragment' OR cvterm.name = 'CDS_independently_known' OR cvterm.name = 'CDS_predicted' OR cvterm.name = 'orphan_CDS' OR cvterm.name = 'CDS_supported_by_sequence_similarity_data' OR cvterm.name = 'CDS_supported_by_domain_match_data' OR cvterm.name = 'CDS_supported_by_EST_or_cDNA_data' OR cvterm.name = 'recoded_codon' OR cvterm.name = 'start_codon' OR cvterm.name = 'stop_codon' OR cvterm.name = 'stop_codon_read_through' OR cvterm.name = 'stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'non_canonical_start_codon' OR cvterm.name = 'four_bp_start_codon' OR cvterm.name = 'CTG_start_codon' OR cvterm.name = 'ribosome_entry_site' OR cvterm.name = 'polyA_site' OR cvterm.name = 'upstream_AUG_codon' OR cvterm.name = 'AU_rich_element' OR cvterm.name = 'Bruno_response_element' OR cvterm.name = 'iron_responsive_element' OR cvterm.name = 'internal_ribosome_entry_site' OR cvterm.name = 'Shine_Dalgarno_sequence' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'coding_start' OR cvterm.name = 'coding_end' OR cvterm.name = 'plus_1_translational_frameshift' OR cvterm.name = 'plus_2_translational_frameshift' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'SECIS_element' OR cvterm.name = 'three_prime_recoding_site' OR cvterm.name = 'five_prime_recoding_site' OR cvterm.name = 'stop_codon_signal' OR cvterm.name = 'three_prime_stem_loop_structure' OR cvterm.name = 'flanking_three_prime_quadruplet_recoding_signal' OR cvterm.name = 'three_prime_repeat_recoding_signal' OR cvterm.name = 'distant_three_prime_recoding_signal' OR cvterm.name = 'UAG_stop_codon_signal' OR cvterm.name = 'UAA_stop_codon_signal' OR cvterm.name = 'UGA_stop_codon_signal' OR cvterm.name = 'tmRNA_coding_piece' OR cvterm.name = 'tmRNA_acceptor_piece' OR cvterm.name = 'anchor_region' OR cvterm.name = 'template_region' OR cvterm.name = 'anticodon_loop' OR cvterm.name = 'anticodon' OR cvterm.name = 'CCA_tail' OR cvterm.name = 'DHU_loop' OR cvterm.name = 'T_loop' OR cvterm.name = 'splice_site' OR cvterm.name = 'intron' OR cvterm.name = 'clip' OR cvterm.name = 'TSS' OR cvterm.name = 'transcription_end_site' OR cvterm.name = 'spliced_leader_RNA' OR cvterm.name = 'rRNA_primary_transcript_region' OR cvterm.name = 'spliceosomal_intron_region' OR cvterm.name = 'intron_domain' OR cvterm.name = 'miRNA_primary_transcript_region' OR cvterm.name = 'outron' OR cvterm.name = 'cis_splice_site' OR cvterm.name = 'trans_splice_site' OR cvterm.name = 'five_prime_cis_splice_site' OR cvterm.name = 'three_prime_cis_splice_site' OR cvterm.name = 'recursive_splice_site' OR cvterm.name = 'canonical_five_prime_splice_site' OR cvterm.name = 'non_canonical_five_prime_splice_site' OR cvterm.name = 'canonical_three_prime_splice_site' OR cvterm.name = 'non_canonical_three_prime_splice_site' OR cvterm.name = 'trans_splice_acceptor_site' OR cvterm.name = 'trans_splice_donor_site' OR cvterm.name = 'SL1_acceptor_site' OR cvterm.name = 'SL2_acceptor_site' OR cvterm.name = 'five_prime_intron' OR cvterm.name = 'interior_intron' OR cvterm.name = 'three_prime_intron' OR cvterm.name = 'twintron' OR cvterm.name = 'UTR_intron' OR cvterm.name = 'autocatalytically_spliced_intron' OR cvterm.name = 'spliceosomal_intron' OR cvterm.name = 'mobile_intron' OR cvterm.name = 'endonuclease_spliced_intron' OR cvterm.name = 'five_prime_UTR_intron' OR cvterm.name = 'three_prime_UTR_intron' OR cvterm.name = 'group_I_intron' OR cvterm.name = 'group_II_intron' OR cvterm.name = 'group_III_intron' OR cvterm.name = 'group_IIA_intron' OR cvterm.name = 'group_IIB_intron' OR cvterm.name = 'U2_intron' OR cvterm.name = 'U12_intron' OR cvterm.name = 'archaeal_intron' OR cvterm.name = 'tRNA_intron' OR cvterm.name = 'five_prime_clip' OR cvterm.name = 'three_prime_clip' OR cvterm.name = 'major_TSS' OR cvterm.name = 'minor_TSS' OR cvterm.name = 'transcribed_spacer_region' OR cvterm.name = 'internal_transcribed_spacer_region' OR cvterm.name = 'external_transcribed_spacer_region' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'branch_site' OR cvterm.name = 'polypyrimidine_tract' OR cvterm.name = 'internal_guide_sequence' OR cvterm.name = 'mirtron' OR cvterm.name = 'pre_miRNA' OR cvterm.name = 'miRNA_stem' OR cvterm.name = 'miRNA_loop' OR cvterm.name = 'miRNA_antiguide' OR cvterm.name = 'noncoding_region_of_exon' OR cvterm.name = 'coding_region_of_exon' OR cvterm.name = 'three_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_coding_region' OR cvterm.name = 'three_prime_coding exon_coding_region' OR cvterm.name = 'mature_protein_region' OR cvterm.name = 'immature_peptide_region' OR cvterm.name = 'compositionally_biased_region_of_peptide' OR cvterm.name = 'polypeptide_structural_region' OR cvterm.name = 'polypeptide_variation_site' OR cvterm.name = 'cleaved_peptide_region' OR cvterm.name = 'hydrophobic_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_region' OR cvterm.name = 'active_peptide' OR cvterm.name = 'polypeptide_domain' OR cvterm.name = 'membrane_structure' OR cvterm.name = 'extramembrane_polypeptide_region' OR cvterm.name = 'intramembrane_polypeptide_region' OR cvterm.name = 'polypeptide_secondary_structure' OR cvterm.name = 'polypeptide_structural_motif' OR cvterm.name = 'intrinsically_unstructured_polypeptide_region' OR cvterm.name = 'cytoplasmic_polypeptide_region' OR cvterm.name = 'non_cytoplasmic_polypeptide_region' OR cvterm.name = 'membrane_peptide_loop' OR cvterm.name = 'transmembrane_polypeptide_region' OR cvterm.name = 'asx_motif' OR cvterm.name = 'beta_bulge' OR cvterm.name = 'beta_bulge_loop' OR cvterm.name = 'beta_strand' OR cvterm.name = 'peptide_helix' OR cvterm.name = 'polypeptide_nest_motif' OR cvterm.name = 'schellmann_loop' OR cvterm.name = 'serine_threonine_motif' OR cvterm.name = 'serine_threonine_staple_motif' OR cvterm.name = 'polypeptide_turn_motif' OR cvterm.name = 'catmat_left_handed_three' OR cvterm.name = 'catmat_left_handed_four' OR cvterm.name = 'catmat_right_handed_three' OR cvterm.name = 'catmat_right_handed_four' OR cvterm.name = 'alpha_beta_motif' OR cvterm.name = 'peptide_coil' OR cvterm.name = 'beta_bulge_loop_five' OR cvterm.name = 'beta_bulge_loop_six' OR cvterm.name = 'antiparallel_beta_strand' OR cvterm.name = 'parallel_beta_strand' OR cvterm.name = 'left_handed_peptide_helix' OR cvterm.name = 'right_handed_peptide_helix' OR cvterm.name = 'alpha_helix' OR cvterm.name = 'pi_helix' OR cvterm.name = 'three_ten_helix' OR cvterm.name = 'polypeptide_nest_left_right_motif' OR cvterm.name = 'polypeptide_nest_right_left_motif' OR cvterm.name = 'schellmann_loop_seven' OR cvterm.name = 'schellmann_loop_six' OR cvterm.name = 'asx_turn' OR cvterm.name = 'beta_turn' OR cvterm.name = 'gamma_turn' OR cvterm.name = 'serine_threonine_turn' OR cvterm.name = 'asx_turn_left_handed_type_one' OR cvterm.name = 'asx_turn_left_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_two' OR cvterm.name = 'beta_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_right_handed_type_two' OR cvterm.name = 'beta_turn_type_six' OR cvterm.name = 'beta_turn_type_eight' OR cvterm.name = 'beta_turn_type_six_a' OR cvterm.name = 'beta_turn_type_six_b' OR cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'gamma_turn_classic' OR cvterm.name = 'gamma_turn_inverse' OR cvterm.name = 'st_turn_left_handed_type_one' OR cvterm.name = 'st_turn_left_handed_type_two' OR cvterm.name = 'st_turn_right_handed_type_one' OR cvterm.name = 'st_turn_right_handed_type_two' OR cvterm.name = 'coiled_coil' OR cvterm.name = 'helix_turn_helix' OR cvterm.name = 'natural_variant_site' OR cvterm.name = 'mutated_variant_site' OR cvterm.name = 'alternate_sequence_site' OR cvterm.name = 'signal_peptide' OR cvterm.name = 'cleaved_initiator_methionine' OR cvterm.name = 'transit_peptide' OR cvterm.name = 'intein' OR cvterm.name = 'propeptide_cleavage_site' OR cvterm.name = 'propeptide' OR cvterm.name = 'cleaved_for_gpi_anchor_region' OR cvterm.name = 'lipoprotein_signal_peptide' OR cvterm.name = 'n_terminal_region' OR cvterm.name = 'c_terminal_region' OR cvterm.name = 'central_hydrophobic_region_of_signal_peptide' OR cvterm.name = 'polypeptide_domain' OR cvterm.name = 'polypeptide_motif' OR cvterm.name = 'polypeptide_repeat' OR cvterm.name = 'biochemical_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_motif' OR cvterm.name = 'post_translationally_modified_region' OR cvterm.name = 'conformational_switch' OR cvterm.name = 'molecular_contact_region' OR cvterm.name = 'polypeptide_binding_motif' OR cvterm.name = 'polypeptide_catalytic_motif' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'non_transcribed_region' OR cvterm.name = 'gene_fragment' OR cvterm.name = 'TSS_region' OR cvterm.name = 'gene_segment' OR cvterm.name = 'mobile_intron' OR cvterm.name = 'extrachromosomal_mobile_genetic_element' OR cvterm.name = 'integrated_mobile_genetic_element' OR cvterm.name = 'viral_sequence' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'transposable_element' OR cvterm.name = 'proviral_region' OR cvterm.name = 'integron' OR cvterm.name = 'genomic_island' OR cvterm.name = 'integrated_plasmid' OR cvterm.name = 'cointegrated_plasmid' OR cvterm.name = 'retrotransposon' OR cvterm.name = 'DNA_transposon' OR cvterm.name = 'foreign_transposable_element' OR cvterm.name = 'transgenic_transposable_element' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'transposon_fragment' OR cvterm.name = 'LTR_retrotransposon' OR cvterm.name = 'non_LTR_retrotransposon' OR cvterm.name = 'RR_tract' OR cvterm.name = 'LINE_element' OR cvterm.name = 'SINE_element' OR cvterm.name = 'terminal_inverted_repeat_element' OR cvterm.name = 'foldback_element' OR cvterm.name = 'conjugative_transposon' OR cvterm.name = 'helitron' OR cvterm.name = 'MITE' OR cvterm.name = 'insertion_sequence' OR cvterm.name = 'polinton' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'prophage' OR cvterm.name = 'pathogenic_island' OR cvterm.name = 'metabolic_island' OR cvterm.name = 'adaptive_island' OR cvterm.name = 'symbiosis_island' OR cvterm.name = 'cryptic_prophage' OR cvterm.name = 'defective_conjugative_transposon' OR cvterm.name = 'plasmid' OR cvterm.name = 'chromosome' OR cvterm.name = 'vector_replicon' OR cvterm.name = 'maxicircle' OR cvterm.name = 'minicircle' OR cvterm.name = 'viral_sequence' OR cvterm.name = 'engineered_plasmid' OR cvterm.name = 'episome' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'mitochondrial_chromosome' OR cvterm.name = 'chloroplast_chromosome' OR cvterm.name = 'chromoplast_chromosome' OR cvterm.name = 'cyanelle_chromosome' OR cvterm.name = 'leucoplast_chromosome' OR cvterm.name = 'macronuclear_chromosome' OR cvterm.name = 'micronuclear_chromosome' OR cvterm.name = 'nuclear_chromosome' OR cvterm.name = 'nucleomorphic_chromosome' OR cvterm.name = 'DNA_chromosome' OR cvterm.name = 'RNA_chromosome' OR cvterm.name = 'apicoplast_chromosome' OR cvterm.name = 'double_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_DNA_chromosome' OR cvterm.name = 'linear_double_stranded_DNA_chromosome' OR cvterm.name = 'circular_double_stranded_DNA_chromosome' OR cvterm.name = 'linear_single_stranded_DNA_chromosome' OR cvterm.name = 'circular_single_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_RNA_chromosome' OR cvterm.name = 'double_stranded_RNA_chromosome' OR cvterm.name = 'linear_single_stranded_RNA_chromosome' OR cvterm.name = 'circular_single_stranded_RNA_chromosome' OR cvterm.name = 'linear_double_stranded_RNA_chromosome' OR cvterm.name = 'circular_double_stranded_RNA_chromosome' OR cvterm.name = 'YAC' OR cvterm.name = 'BAC' OR cvterm.name = 'PAC' OR cvterm.name = 'cosmid' OR cvterm.name = 'phagemid' OR cvterm.name = 'fosmid' OR cvterm.name = 'lambda_vector' OR cvterm.name = 'plasmid_vector' OR cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'modified_RNA_base_feature' OR cvterm.name = 'modified_base_site' OR cvterm.name = 'inosine' OR cvterm.name = 'seven_methylguanine' OR cvterm.name = 'ribothymidine' OR cvterm.name = 'modified_adenosine' OR cvterm.name = 'modified_cytidine' OR cvterm.name = 'modified_guanosine' OR cvterm.name = 'modified_uridine' OR cvterm.name = 'modified_inosine' OR cvterm.name = 'methylinosine' OR cvterm.name = 'one_methylinosine' OR cvterm.name = 'one_two_prime_O_dimethylinosine' OR cvterm.name = 'two_prime_O_methylinosine' OR cvterm.name = 'one_methyladenosine' OR cvterm.name = 'two_methyladenosine' OR cvterm.name = 'N6_methyladenosine' OR cvterm.name = 'two_prime_O_methyladenosine' OR cvterm.name = 'two_methylthio_N6_methyladenosine' OR cvterm.name = 'N6_isopentenyladenosine' OR cvterm.name = 'two_methylthio_N6_isopentenyladenosine' OR cvterm.name = 'N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'two_methylthio_N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'N6_glycinylcarbamoyladenosine' OR cvterm.name = 'N6_threonylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_threonyl_carbamoyladenosine' OR cvterm.name = 'N6_methyl_N6_threonylcarbamoyladenosine' OR cvterm.name = 'N6_hydroxynorvalylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine' OR cvterm.name = 'two_prime_O_ribosyladenosine_phosphate' OR cvterm.name = 'N6_N6_dimethyladenosine' OR cvterm.name = 'N6_2_prime_O_dimethyladenosine' OR cvterm.name = 'N6_N6_2_prime_O_trimethyladenosine' OR cvterm.name = 'one_two_prime_O_dimethyladenosine' OR cvterm.name = 'N6_acetyladenosine' OR cvterm.name = 'three_methylcytidine' OR cvterm.name = 'five_methylcytidine' OR cvterm.name = 'two_prime_O_methylcytidine' OR cvterm.name = 'two_thiocytidine' OR cvterm.name = 'N4_acetylcytidine' OR cvterm.name = 'five_formylcytidine' OR cvterm.name = 'five_two_prime_O_dimethylcytidine' OR cvterm.name = 'N4_acetyl_2_prime_O_methylcytidine' OR cvterm.name = 'lysidine' OR cvterm.name = 'N4_methylcytidine' OR cvterm.name = 'N4_2_prime_O_dimethylcytidine' OR cvterm.name = 'five_hydroxymethylcytidine' OR cvterm.name = 'five_formyl_two_prime_O_methylcytidine' OR cvterm.name = 'N4_N4_2_prime_O_trimethylcytidine' OR cvterm.name = 'seven_deazaguanosine' OR cvterm.name = 'one_methylguanosine' OR cvterm.name = 'N2_methylguanosine' OR cvterm.name = 'seven_methylguanosine' OR cvterm.name = 'two_prime_O_methylguanosine' OR cvterm.name = 'N2_N2_dimethylguanosine' OR cvterm.name = 'N2_2_prime_O_dimethylguanosine' OR cvterm.name = 'N2_N2_2_prime_O_trimethylguanosine' OR cvterm.name = 'two_prime_O_ribosylguanosine_phosphate' OR cvterm.name = 'wybutosine' OR cvterm.name = 'peroxywybutosine' OR cvterm.name = 'hydroxywybutosine' OR cvterm.name = 'undermodified_hydroxywybutosine' OR cvterm.name = 'wyosine' OR cvterm.name = 'methylwyosine' OR cvterm.name = 'N2_7_dimethylguanosine' OR cvterm.name = 'N2_N2_7_trimethylguanosine' OR cvterm.name = 'one_two_prime_O_dimethylguanosine' OR cvterm.name = 'four_demethylwyosine' OR cvterm.name = 'isowyosine' OR cvterm.name = 'N2_7_2prirme_O_trimethylguanosine' OR cvterm.name = 'queuosine' OR cvterm.name = 'epoxyqueuosine' OR cvterm.name = 'galactosyl_queuosine' OR cvterm.name = 'mannosyl_queuosine' OR cvterm.name = 'seven_cyano_seven_deazaguanosine' OR cvterm.name = 'seven_aminomethyl_seven_deazaguanosine' OR cvterm.name = 'archaeosine' OR cvterm.name = 'dihydrouridine' OR cvterm.name = 'pseudouridine' OR cvterm.name = 'five_methyluridine' OR cvterm.name = 'two_prime_O_methyluridine' OR cvterm.name = 'five_two_prime_O_dimethyluridine' OR cvterm.name = 'one_methylpseudouridine' OR cvterm.name = 'two_prime_O_methylpseudouridine' OR cvterm.name = 'two_thiouridine' OR cvterm.name = 'four_thiouridine' OR cvterm.name = 'five_methyl_2_thiouridine' OR cvterm.name = 'two_thio_two_prime_O_methyluridine' OR cvterm.name = 'three_three_amino_three_carboxypropyl_uridine' OR cvterm.name = 'five_hydroxyuridine' OR cvterm.name = 'five_methoxyuridine' OR cvterm.name = 'uridine_five_oxyacetic_acid' OR cvterm.name = 'uridine_five_oxyacetic_acid_methyl_ester' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine_methyl_ester' OR cvterm.name = 'five_methoxycarbonylmethyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_thiouridine' OR cvterm.name = 'five_aminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyluridine' OR cvterm.name = 'five_methylaminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyl_two_selenouridine' OR cvterm.name = 'five_carbamoylmethyluridine' OR cvterm.name = 'five_carbamoylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_thiouridine' OR cvterm.name = 'three_methyluridine' OR cvterm.name = 'one_methyl_three_three_amino_three_carboxypropyl_pseudouridine' OR cvterm.name = 'five_carboxymethyluridine' OR cvterm.name = 'three_two_prime_O_dimethyluridine' OR cvterm.name = 'five_methyldihydrouridine' OR cvterm.name = 'three_methylpseudouridine' OR cvterm.name = 'five_taurinomethyluridine' OR cvterm.name = 'five_taurinomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_uridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'methylated_base_feature' OR cvterm.name = 'methylated_C' OR cvterm.name = 'methylated_A' OR cvterm.name = 'catalytic_residue' OR cvterm.name = 'modified_amino_acid_feature' OR cvterm.name = 'alanine' OR cvterm.name = 'valine' OR cvterm.name = 'leucine' OR cvterm.name = 'isoleucine' OR cvterm.name = 'proline' OR cvterm.name = 'tryptophan' OR cvterm.name = 'phenylalanine' OR cvterm.name = 'methionine' OR cvterm.name = 'glycine' OR cvterm.name = 'serine' OR cvterm.name = 'threonine' OR cvterm.name = 'tyrosine' OR cvterm.name = 'cysteine' OR cvterm.name = 'glutamine' OR cvterm.name = 'asparagine' OR cvterm.name = 'lysine' OR cvterm.name = 'argenine' OR cvterm.name = 'histidine' OR cvterm.name = 'aspartic_acid' OR cvterm.name = 'glutamic_acid' OR cvterm.name = 'selenocysteine' OR cvterm.name = 'pyrrolysine' OR cvterm.name = 'modified_glycine' OR cvterm.name = 'modified_L_alanine' OR cvterm.name = 'modified_L_asparagine' OR cvterm.name = 'modified_L_aspartic_acid' OR cvterm.name = 'modified_L_cysteine' OR cvterm.name = 'modified_L_glutamic_acid' OR cvterm.name = 'modified_L_threonine' OR cvterm.name = 'modified_L_tryptophan' OR cvterm.name = 'modified_L_glutamine' OR cvterm.name = 'modified_L_methionine' OR cvterm.name = 'modified_L_isoleucine' OR cvterm.name = 'modified_L_phenylalanine' OR cvterm.name = 'modified_L_histidine' OR cvterm.name = 'modified_L_serine' OR cvterm.name = 'modified_L_lysine' OR cvterm.name = 'modified_L_leucine' OR cvterm.name = 'modified_L_selenocysteine' OR cvterm.name = 'modified_L_valine' OR cvterm.name = 'modified_L_proline' OR cvterm.name = 'modified_L_tyrosine' OR cvterm.name = 'modified_L_arginine' OR cvterm.name = 'operon' OR cvterm.name = 'gene_array' OR cvterm.name = 'gene_subarray' OR cvterm.name = 'gene_cassette_array' OR cvterm.name = 'regulon' OR cvterm.name = 'sequence_length_variation' OR cvterm.name = 'SNP' OR cvterm.name = 'complex_substitution' OR cvterm.name = 'point_mutation' OR cvterm.name = 'simple_sequence_length_variation' OR cvterm.name = 'MNP' OR cvterm.name = 'transition' OR cvterm.name = 'transversion' OR cvterm.name = 'pyrimidine_transition' OR cvterm.name = 'purine_transition' OR cvterm.name = 'C_to_T_transition' OR cvterm.name = 'T_to_C_transition' OR cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'A_to_G_transition' OR cvterm.name = 'G_to_A_transition' OR cvterm.name = 'pyrimidine_to_purine_transversion' OR cvterm.name = 'purine_to_pyrimidine_transversion' OR cvterm.name = 'C_to_A_transversion' OR cvterm.name = 'C_to_G_transversion' OR cvterm.name = 'T_to_A_transversion' OR cvterm.name = 'T_to_G_transversion' OR cvterm.name = 'A_to_C_transversion' OR cvterm.name = 'A_to_T_transversion' OR cvterm.name = 'G_to_C_transversion' OR cvterm.name = 'G_to_T_transversion' OR cvterm.name = 'flanking_region' OR cvterm.name = 'repeat_region' OR cvterm.name = 'repeat_unit' OR cvterm.name = 'repeat_component' OR cvterm.name = 'transposable_element_flanking_region' OR cvterm.name = 'five_prime_flanking_region' OR cvterm.name = 'three_prime_flanking_region' OR cvterm.name = 'long_terminal_repeat' OR cvterm.name = 'engineered_foreign_repetitive_element' OR cvterm.name = 'inverted_repeat' OR cvterm.name = 'direct_repeat' OR cvterm.name = 'non_LTR_retrotransposon_polymeric_tract' OR cvterm.name = 'dispersed_repeat' OR cvterm.name = 'tandem_repeat' OR cvterm.name = 'repeat_fragment' OR cvterm.name = 'five_prime_LTR' OR cvterm.name = 'three_prime_LTR' OR cvterm.name = 'solo_LTR' OR cvterm.name = 'terminal_inverted_repeat' OR cvterm.name = 'five_prime_terminal_inverted_repeat' OR cvterm.name = 'three_prime_terminal_inverted_repeat' OR cvterm.name = 'target_site_duplication' OR cvterm.name = 'CRISPR' OR cvterm.name = 'satellite_DNA' OR cvterm.name = 'microsatellite' OR cvterm.name = 'minisatellite' OR cvterm.name = 'dinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'trinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'tetranucleotide_repeat_microsatellite_feature' OR cvterm.name = 'non_LTR_retrotransposon_polymeric_tract' OR cvterm.name = 'LTR_component' OR cvterm.name = 'repeat_fragment' OR cvterm.name = 'U5_LTR_region' OR cvterm.name = 'R_LTR_region' OR cvterm.name = 'U3_LTR_region' OR cvterm.name = 'three_prime_LTR_component' OR cvterm.name = 'five_prime_LTR_component' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'R_three_prime_LTR_region' OR cvterm.name = 'U3_three_prime_LTR_region' OR cvterm.name = 'U5_three_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'clone_insert_end' OR cvterm.name = 'clone_insert_start' OR cvterm.name = 'exon_junction' OR cvterm.name = 'insertion_site' OR cvterm.name = 'deletion_junction' OR cvterm.name = 'chromosome_breakpoint' OR cvterm.name = 'splice_junction' OR cvterm.name = 'polyA_junction' OR cvterm.name = 'trans_splice_junction' OR cvterm.name = 'transposable_element_insertion_site' OR cvterm.name = 'inversion_breakpoint' OR cvterm.name = 'translocation_breakpoint' OR cvterm.name = 'insertion_breakpoint' OR cvterm.name = 'deletion_breakpoint' OR cvterm.name = 'deletion' OR cvterm.name = 'translocation' OR cvterm.name = 'insertion' OR cvterm.name = 'substitution' OR cvterm.name = 'uncharacterised_change_in_nucleotide_sequence' OR cvterm.name = 'indel' OR cvterm.name = 'inversion' OR cvterm.name = 'transgenic_insertion' OR cvterm.name = 'sequence_length_variation' OR cvterm.name = 'SNP' OR cvterm.name = 'complex_substitution' OR cvterm.name = 'point_mutation' OR cvterm.name = 'simple_sequence_length_variation' OR cvterm.name = 'MNP' OR cvterm.name = 'transition' OR cvterm.name = 'transversion' OR cvterm.name = 'pyrimidine_transition' OR cvterm.name = 'purine_transition' OR cvterm.name = 'C_to_T_transition' OR cvterm.name = 'T_to_C_transition' OR cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'A_to_G_transition' OR cvterm.name = 'G_to_A_transition' OR cvterm.name = 'pyrimidine_to_purine_transversion' OR cvterm.name = 'purine_to_pyrimidine_transversion' OR cvterm.name = 'C_to_A_transversion' OR cvterm.name = 'C_to_G_transversion' OR cvterm.name = 'T_to_A_transversion' OR cvterm.name = 'T_to_G_transversion' OR cvterm.name = 'A_to_C_transversion' OR cvterm.name = 'A_to_T_transversion' OR cvterm.name = 'G_to_C_transversion' OR cvterm.name = 'G_to_T_transversion' OR cvterm.name = 'partially_characterised_change_in_DNA_sequence' OR cvterm.name = 'nucleotide_deletion' OR cvterm.name = 'nucleotide_insertion' OR cvterm.name = 'nucleotide_duplication' OR cvterm.name = 'sequence_feature';
> 
> --- ************************************************
> --- *** relation: transposable_element_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene encoded within a transposable ele ***
> --- *** ment. For example gag, int, env and pol  ***
> --- *** are the transposable element genes of th ***
> --- *** e TY element in yeast.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW transposable_element_gene AS
>   SELECT
>     feature_id AS transposable_element_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'transposable_element_gene';
> 
> --- ************************************************
> --- *** relation: primer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A short preexisting polynucleotide chain ***
> --- ***  to which new deoxyribonucleotides can b ***
> --- *** e added by DNA polymerase.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW primer AS
>   SELECT
>     feature_id AS primer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequencing_primer' OR cvterm.name = 'forward_primer' OR cvterm.name = 'reverse_primer' OR cvterm.name = 'primer';
> 
> --- ************************************************
> --- *** relation: proviral_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A viral sequence which has integrated in ***
> --- *** to a host genome.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW proviral_region AS
>   SELECT
>     feature_id AS proviral_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'prophage' OR cvterm.name = 'proviral_region';
> 
> --- ************************************************
> --- *** relation: methylated_c ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A methylated deoxy-cytosine.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW methylated_c AS
>   SELECT
>     feature_id AS methylated_c_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylated_C';
> 
> --- ************************************************
> --- *** relation: edited ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence that  ***
> --- *** is modified by editing.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW edited AS
>   SELECT
>     feature_id AS edited_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'edited';
> 
> --- ************************************************
> --- *** relation: transcript_with_translational_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript with a translational frames ***
> --- *** hift.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcript_with_translational_frameshift AS
>   SELECT
>     feature_id AS transcript_with_translational_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcript_with_translational_frameshift';
> 
> --- ************************************************
> --- *** relation: regulated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a sequence that ***
> --- ***  is regulated.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW regulated AS
>   SELECT
>     feature_id AS regulated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcriptionally_regulated' OR cvterm.name = 'post_translationally_regulated' OR cvterm.name = 'translationally_regulated' OR cvterm.name = 'imprinted' OR cvterm.name = 'transcriptionally_constitutive' OR cvterm.name = 'transcriptionally_induced' OR cvterm.name = 'transcriptionally_repressed' OR cvterm.name = 'autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'silenced' OR cvterm.name = 'silenced_by_DNA_modification' OR cvterm.name = 'silenced_by_RNA_interference' OR cvterm.name = 'silenced_by_histone_modification' OR cvterm.name = 'silenced_by_DNA_methylation' OR cvterm.name = 'silenced_by_histone_methylation' OR cvterm.name = 'silenced_by_histone_deacetylation' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'post_translationally_regulated_by_protein_stability' OR cvterm.name = 'post_translationally_regulated_by_protein_modification' OR cvterm.name = 'maternally_imprinted' OR cvterm.name = 'paternally_imprinted' OR cvterm.name = 'regulated';
> 
> --- ************************************************
> --- *** relation: protein_coding_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript that, at least in p ***
> --- *** art, encodes one or more proteins.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW protein_coding_primary_transcript AS
>   SELECT
>     feature_id AS protein_coding_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pre_edited_mRNA' OR cvterm.name = 'protein_coding_primary_transcript';
> 
> --- ************************************************
> --- *** relation: forward_primer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A single stranded oligo used for polymer ***
> --- *** ase chain reaction.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW forward_primer AS
>   SELECT
>     feature_id AS forward_primer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'forward_primer';
> 
> --- ************************************************
> --- *** relation: rna_sequence_secondary_structure ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A folded RNA sequence.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna_sequence_secondary_structure AS
>   SELECT
>     feature_id AS rna_sequence_secondary_structure_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stem_loop' OR cvterm.name = 'tetraloop' OR cvterm.name = 'RNA_sequence_secondary_structure';
> 
> --- ************************************************
> --- *** relation: transcriptionally_regulated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a gene that is r ***
> --- *** egulated at transcription.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcriptionally_regulated AS
>   SELECT
>     feature_id AS transcriptionally_regulated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcriptionally_constitutive' OR cvterm.name = 'transcriptionally_induced' OR cvterm.name = 'transcriptionally_repressed' OR cvterm.name = 'autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'silenced' OR cvterm.name = 'silenced_by_DNA_modification' OR cvterm.name = 'silenced_by_RNA_interference' OR cvterm.name = 'silenced_by_histone_modification' OR cvterm.name = 'silenced_by_DNA_methylation' OR cvterm.name = 'silenced_by_histone_methylation' OR cvterm.name = 'silenced_by_histone_deacetylation' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'transcriptionally_regulated';
> 
> --- ************************************************
> --- *** relation: transcriptionally_constitutive ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Expressed in relatively constant amounts ***
> --- ***  without regard to cellular environmenta ***
> --- *** l conditions such as the concentration o ***
> --- *** f a particular substrate.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcriptionally_constitutive AS
>   SELECT
>     feature_id AS transcriptionally_constitutive_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcriptionally_constitutive';
> 
> --- ************************************************
> --- *** relation: transcriptionally_induced ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An inducer molecule is required for tran ***
> --- *** scription to occur.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcriptionally_induced AS
>   SELECT
>     feature_id AS transcriptionally_induced_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'positively_autoregulated' OR cvterm.name = 'transcriptionally_induced';
> 
> --- ************************************************
> --- *** relation: transcriptionally_repressed ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A repressor molecule is required for tra ***
> --- *** nscription to stop.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcriptionally_repressed AS
>   SELECT
>     feature_id AS transcriptionally_repressed_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'silenced' OR cvterm.name = 'silenced_by_DNA_modification' OR cvterm.name = 'silenced_by_RNA_interference' OR cvterm.name = 'silenced_by_histone_modification' OR cvterm.name = 'silenced_by_DNA_methylation' OR cvterm.name = 'silenced_by_histone_methylation' OR cvterm.name = 'silenced_by_histone_deacetylation' OR cvterm.name = 'transcriptionally_repressed';
> 
> --- ************************************************
> --- *** relation: silenced_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is silenced.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW silenced_gene AS
>   SELECT
>     feature_id AS silenced_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_silenced_by_DNA_modification' OR cvterm.name = 'gene_silenced_by_RNA_interference' OR cvterm.name = 'gene_silenced_by_histone_modification' OR cvterm.name = 'gene_silenced_by_DNA_methylation' OR cvterm.name = 'gene_silenced_by_histone_methylation' OR cvterm.name = 'gene_silenced_by_histone_deacetylation' OR cvterm.name = 'silenced_gene';
> 
> --- ************************************************
> --- *** relation: gene_silenced_by_dna_modification ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is silenced by DNA modificat ***
> --- *** ion.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_silenced_by_dna_modification AS
>   SELECT
>     feature_id AS gene_silenced_by_dna_modification_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_silenced_by_DNA_methylation' OR cvterm.name = 'gene_silenced_by_DNA_modification';
> 
> --- ************************************************
> --- *** relation: gene_silenced_by_dna_methylation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is silenced by DNA methylati ***
> --- *** on.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_silenced_by_dna_methylation AS
>   SELECT
>     feature_id AS gene_silenced_by_dna_methylation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_silenced_by_DNA_methylation';
> 
> --- ************************************************
> --- *** relation: post_translationally_regulated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a gene that is r ***
> --- *** egulated after it has been translated.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW post_translationally_regulated AS
>   SELECT
>     feature_id AS post_translationally_regulated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'post_translationally_regulated_by_protein_stability' OR cvterm.name = 'post_translationally_regulated_by_protein_modification' OR cvterm.name = 'post_translationally_regulated';
> 
> --- ************************************************
> --- *** relation: translationally_regulated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a gene that is r ***
> --- *** egulated as it is translated.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW translationally_regulated AS
>   SELECT
>     feature_id AS translationally_regulated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'translationally_regulated';
> 
> --- ************************************************
> --- *** relation: reverse_primer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A single stranded oligo used for polymer ***
> --- *** ase chain reaction.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW reverse_primer AS
>   SELECT
>     feature_id AS reverse_primer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'reverse_primer';
> 
> --- ************************************************
> --- *** relation: epigenetically_modified ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** This attribute describes a gene where he ***
> --- *** ritable changes other than those in the  ***
> --- *** DNA sequence occur. These changes includ ***
> --- *** e: modification to the DNA (such as DNA  ***
> --- *** methylation, the covalent modification o ***
> --- *** f cytosine), and post-translational modi ***
> --- *** fication of histones.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW epigenetically_modified AS
>   SELECT
>     feature_id AS epigenetically_modified_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'imprinted' OR cvterm.name = 'allelically_excluded' OR cvterm.name = 'rearranged_at_DNA_level' OR cvterm.name = 'maternally_imprinted' OR cvterm.name = 'paternally_imprinted' OR cvterm.name = 'epigenetically_modified';
> 
> --- ************************************************
> --- *** relation: imprinted ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Imprinted genes are epigenetically modif ***
> --- *** ied genes that are expressed monoallelic ***
> --- *** ally according to their parent of origin ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW imprinted AS
>   SELECT
>     feature_id AS imprinted_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'maternally_imprinted' OR cvterm.name = 'paternally_imprinted' OR cvterm.name = 'imprinted';
> 
> --- ************************************************
> --- *** relation: maternally_imprinted ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The maternal copy of the gene is modifie ***
> --- *** d, rendering it transcriptionally silent ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW maternally_imprinted AS
>   SELECT
>     feature_id AS maternally_imprinted_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'maternally_imprinted';
> 
> --- ************************************************
> --- *** relation: paternally_imprinted ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The paternal copy of the gene is modifie ***
> --- *** d, rendering it transcriptionally silent ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW paternally_imprinted AS
>   SELECT
>     feature_id AS paternally_imprinted_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'paternally_imprinted';
> 
> --- ************************************************
> --- *** relation: allelically_excluded ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Allelic exclusion is a process occuring  ***
> --- *** in diploid organisms, where a gene is in ***
> --- *** activated and not expressed in that cell ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW allelically_excluded AS
>   SELECT
>     feature_id AS allelically_excluded_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'allelically_excluded';
> 
> --- ************************************************
> --- *** relation: gene_rearranged_at_dna_level ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An epigenetically modified gene, rearran ***
> --- *** ged at the DNA level.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_rearranged_at_dna_level AS
>   SELECT
>     feature_id AS gene_rearranged_at_dna_level_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_rearranged_at_DNA_level';
> 
> --- ************************************************
> --- *** relation: ribosome_entry_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Region in mRNA where ribosome assembles. ***
> --- ************************************************
> ---
> 
> CREATE VIEW ribosome_entry_site AS
>   SELECT
>     feature_id AS ribosome_entry_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_ribosome_entry_site' OR cvterm.name = 'Shine_Dalgarno_sequence' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'ribosome_entry_site';
> 
> --- ************************************************
> --- *** relation: attenuator ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence segment located within the fi ***
> --- *** ve prime end of an mRNA that causes prem ***
> --- *** ature termination of translation.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW attenuator AS
>   SELECT
>     feature_id AS attenuator_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attenuator';
> 
> --- ************************************************
> --- *** relation: terminator ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequence of DNA located either at th ***
> --- *** e end of the transcript that causes RNA  ***
> --- *** polymerase to terminate transcription.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW terminator AS
>   SELECT
>     feature_id AS terminator_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'bacterial_terminator' OR cvterm.name = 'eukaryotic_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'terminator_of_type_2_RNApol_III_promoter' OR cvterm.name = 'terminator';
> 
> --- ************************************************
> --- *** relation: dna_sequence_secondary_structure ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A folded DNA sequence.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW dna_sequence_secondary_structure AS
>   SELECT
>     feature_id AS dna_sequence_secondary_structure_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'i_motif' OR cvterm.name = 'DNA_sequence_secondary_structure';
> 
> --- ************************************************
> --- *** relation: assembly_component ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of known length which may be us ***
> --- *** ed to manufacture a longer region.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW assembly_component AS
>   SELECT
>     feature_id AS assembly_component_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'read_pair' OR cvterm.name = 'contig' OR cvterm.name = 'read' OR cvterm.name = 'restriction_fragment' OR cvterm.name = 'golden_path_fragment' OR cvterm.name = 'tiling_path_fragment' OR cvterm.name = 'gap' OR cvterm.name = 'sonicate_fragment' OR cvterm.name = 'contig_read' OR cvterm.name = 'BAC_end' OR cvterm.name = 'dye_terminator_read' OR cvterm.name = 'pyrosequenced_read' OR cvterm.name = 'ligation_based_read' OR cvterm.name = 'polymerase_synthesis_read' OR cvterm.name = 'PAC_end' OR cvterm.name = 'RFLP_fragment' OR cvterm.name = 'tiling_path_clone' OR cvterm.name = 'assembly_component';
> 
> --- ************************************************
> --- *** relation: recoded_codon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A codon that has been redefined at trans ***
> --- *** lation. The redefinition may be as a res ***
> --- *** ult of translational bypass, translation ***
> --- *** al frameshifting or stop codon readthrou ***
> --- *** gh.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW recoded_codon AS
>   SELECT
>     feature_id AS recoded_codon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stop_codon_read_through' OR cvterm.name = 'stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'recoded_codon';
> 
> --- ************************************************
> --- *** relation: capped ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing when a sequence, ***
> --- ***  usually an mRNA is capped by the additi ***
> --- *** on of a modified guanine nucleotide at t ***
> --- *** he 5' end.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW capped AS
>   SELECT
>     feature_id AS capped_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'capped';
> 
> --- ************************************************
> --- *** relation: exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of the transcript sequence with ***
> --- *** in a gene which is not removed from the  ***
> --- *** primary RNA transcript by RNA splicing.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW exon AS
>   SELECT
>     feature_id AS exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'coding_exon' OR cvterm.name = 'noncoding_exon' OR cvterm.name = 'interior_exon' OR cvterm.name = 'exon_of_single_exon_gene' OR cvterm.name = 'interior_coding_exon' OR cvterm.name = 'five_prime_coding_exon' OR cvterm.name = 'three_prime_coding_exon' OR cvterm.name = 'three_prime_noncoding_exon' OR cvterm.name = 'five_prime_noncoding_exon' OR cvterm.name = 'exon';
> 
> --- ************************************************
> --- *** relation: supercontig ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** One or more contigs that have been order ***
> --- *** ed and oriented using end-read informati ***
> --- *** on. Contains gaps that are filled with N ***
> --- *** 's.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW supercontig AS
>   SELECT
>     feature_id AS supercontig_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'supercontig';
> 
> --- ************************************************
> --- *** relation: contig ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A contiguous sequence derived from seque ***
> --- *** nce assembly. Has no gaps, but may conta ***
> --- *** in N's from unvailable bases.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW contig AS
>   SELECT
>     feature_id AS contig_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'contig';
> 
> --- ************************************************
> --- *** relation: read ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence obtained from a single sequen ***
> --- *** cing experiment. Typically a read is pro ***
> --- *** duced when a base calling program interp ***
> --- *** rets information from a chromatogram tra ***
> --- *** ce file produced from a sequencing machi ***
> --- *** ne.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW read AS
>   SELECT
>     feature_id AS read_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'contig_read' OR cvterm.name = 'BAC_end' OR cvterm.name = 'dye_terminator_read' OR cvterm.name = 'pyrosequenced_read' OR cvterm.name = 'ligation_based_read' OR cvterm.name = 'polymerase_synthesis_read' OR cvterm.name = 'PAC_end' OR cvterm.name = 'read';
> 
> --- ************************************************
> --- *** relation: clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A piece of DNA that has been inserted in ***
> --- ***  a vector so that it can be propagated i ***
> --- *** n a host bacterium or some other organis ***
> --- *** m.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW clone AS
>   SELECT
>     feature_id AS clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'genomic_clone' OR cvterm.name = 'cDNA_clone' OR cvterm.name = 'tiling_path_clone' OR cvterm.name = 'validated_cDNA_clone' OR cvterm.name = 'invalidated_cDNA_clone' OR cvterm.name = 'three_prime_RACE_clone' OR cvterm.name = 'chimeric_cDNA_clone' OR cvterm.name = 'genomically_contaminated_cDNA_clone' OR cvterm.name = 'polyA_primed_cDNA_clone' OR cvterm.name = 'partially_processed_cDNA_clone' OR cvterm.name = 'clone';
> 
> --- ************************************************
> --- *** relation: yac ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Yeast Artificial Chromosome, a vector co ***
> --- *** nstructed from the telomeric, centromeri ***
> --- *** c, and replication origin sequences need ***
> --- *** ed for replication in yeast cells.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW yac AS
>   SELECT
>     feature_id AS yac_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'YAC';
> 
> --- ************************************************
> --- *** relation: bac ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Bacterial Artificial Chromosome, a cloni ***
> --- *** ng vector that can be propagated as mini ***
> --- *** -chromosomes in a bacterial host.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW bac AS
>   SELECT
>     feature_id AS bac_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'BAC';
> 
> --- ************************************************
> --- *** relation: pac ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The P1-derived artificial chromosome are ***
> --- ***  DNA constructs that are derived from th ***
> --- *** e DNA of P1 bacteriophage. They can carr ***
> --- *** y large amounts (about 100-300 kilobases ***
> --- *** ) of other sequences for a variety of bi ***
> --- *** oengineering purposes. It is one type of ***
> --- ***  vector used to clone DNA fragments (100 ***
> --- *** - to 300-kb insert size; average, 150 kb ***
> --- *** ) in Escherichia coli cells.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW pac AS
>   SELECT
>     feature_id AS pac_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'PAC';
> 
> --- ************************************************
> --- *** relation: plasmid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A self replicating, using the hosts cell ***
> --- *** ular machinery, often circular nucleic a ***
> --- *** cid molecule that is distinct from a chr ***
> --- *** omosome in the organism.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW plasmid AS
>   SELECT
>     feature_id AS plasmid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_plasmid' OR cvterm.name = 'episome' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'plasmid';
> 
> --- ************************************************
> --- *** relation: cosmid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cloning vector that is a hybrid of lam ***
> --- *** bda phages and a plasmid that can be pro ***
> --- *** pagated as a plasmid or packaged as a ph ***
> --- *** age,since they retain the lambda cos sit ***
> --- *** es.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW cosmid AS
>   SELECT
>     feature_id AS cosmid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cosmid';
> 
> --- ************************************************
> --- *** relation: phagemid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A plasmid which carries within its seque ***
> --- *** nce a bacteriophage replication origin.  ***
> --- *** When the host bacterium is infected with ***
> --- ***  "helper" phage, a phagemid is replicate ***
> --- *** d along with the phage DNA and packaged  ***
> --- *** into phage capsids.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW phagemid AS
>   SELECT
>     feature_id AS phagemid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'phagemid';
> 
> --- ************************************************
> --- *** relation: fosmid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cloning vector that utilises the E. co ***
> --- *** li F factor.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW fosmid AS
>   SELECT
>     feature_id AS fosmid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'fosmid';
> 
> --- ************************************************
> --- *** relation: deletion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The point at which a deletion occured.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW deletion AS
>   SELECT
>     feature_id AS deletion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deletion';
> 
> --- ************************************************
> --- *** relation: methylated_a ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified RNA base in which adenine has ***
> --- ***  been methylated.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW methylated_a AS
>   SELECT
>     feature_id AS methylated_a_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylated_A';
> 
> --- ************************************************
> --- *** relation: splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Consensus region of primary transcript b ***
> --- *** ordering junction of splicing. A region  ***
> --- *** that overlaps exactly 2 base and adjacen ***
> --- *** t_to splice_junction.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW splice_site AS
>   SELECT
>     feature_id AS splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cis_splice_site' OR cvterm.name = 'trans_splice_site' OR cvterm.name = 'five_prime_cis_splice_site' OR cvterm.name = 'three_prime_cis_splice_site' OR cvterm.name = 'recursive_splice_site' OR cvterm.name = 'canonical_five_prime_splice_site' OR cvterm.name = 'non_canonical_five_prime_splice_site' OR cvterm.name = 'canonical_three_prime_splice_site' OR cvterm.name = 'non_canonical_three_prime_splice_site' OR cvterm.name = 'trans_splice_acceptor_site' OR cvterm.name = 'trans_splice_donor_site' OR cvterm.name = 'SL1_acceptor_site' OR cvterm.name = 'SL2_acceptor_site' OR cvterm.name = 'splice_site';
> 
> --- ************************************************
> --- *** relation: five_prime_cis_splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Intronic 2 bp region bordering the exon, ***
> --- ***  at the 5' edge of the intron. A splice_ ***
> --- *** site that is downstream_adjacent_to exon ***
> --- ***  and starts intron.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_cis_splice_site AS
>   SELECT
>     feature_id AS five_prime_cis_splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'canonical_five_prime_splice_site' OR cvterm.name = 'non_canonical_five_prime_splice_site' OR cvterm.name = 'five_prime_cis_splice_site';
> 
> --- ************************************************
> --- *** relation: three_prime_cis_splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Intronic 2 bp region bordering the exon, ***
> --- ***  at the 3' edge of the intron. A splice_ ***
> --- *** site that is upstream_adjacent_to exon a ***
> --- *** nd finishes intron.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_cis_splice_site AS
>   SELECT
>     feature_id AS three_prime_cis_splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'canonical_three_prime_splice_site' OR cvterm.name = 'non_canonical_three_prime_splice_site' OR cvterm.name = 'three_prime_cis_splice_site';
> 
> --- ************************************************
> --- *** relation: enhancer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cis-acting sequence that increases the ***
> --- ***  utilization of (some) eukaryotic promot ***
> --- *** ers, and can function in either orientat ***
> --- *** ion and in any location (upstream or dow ***
> --- *** nstream) relative to the promoter.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW enhancer AS
>   SELECT
>     feature_id AS enhancer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'enhancer_bound_by_factor' OR cvterm.name = 'shadow_enhancer' OR cvterm.name = 'enhancer';
> 
> --- ************************************************
> --- *** relation: enhancer_bound_by_factor ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An enhancer bound by a factor.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW enhancer_bound_by_factor AS
>   SELECT
>     feature_id AS enhancer_bound_by_factor_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'enhancer_bound_by_factor';
> 
> --- ************************************************
> --- *** relation: promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A regulatory_region composed of the TSS( ***
> --- *** s) and binding sites for TF_complexes of ***
> --- ***  the basal transcription machinery.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW promoter AS
>   SELECT
>     feature_id AS promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'bidirectional_promoter' OR cvterm.name = 'RNA_polymerase_promoter' OR cvterm.name = 'RNApol_I_promoter' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'Phage_RNA_Polymerase_Promoter' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'SP6_RNA_Polymerase_Promoter' OR cvterm.name = 'T3_RNA_Polymerase_Promoter' OR cvterm.name = 'T7_RNA_Polymerase_Promoter' OR cvterm.name = 'promoter';
> 
> --- ************************************************
> --- *** relation: rnapol_i_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA sequence in eukaryotic DNA to whic ***
> --- *** h RNA polymerase I binds, to begin trans ***
> --- *** cription.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW rnapol_i_promoter AS
>   SELECT
>     feature_id AS rnapol_i_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNApol_I_promoter';
> 
> --- ************************************************
> --- *** relation: rnapol_ii_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA sequence in eukaryotic DNA to whic ***
> --- *** h RNA polymerase II binds, to begin tran ***
> --- *** scription.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW rnapol_ii_promoter AS
>   SELECT
>     feature_id AS rnapol_ii_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNApol_II_promoter';
> 
> --- ************************************************
> --- *** relation: rnapol_iii_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA sequence in eukaryotic DNA to whic ***
> --- *** h RNA polymerase III binds, to begin tra ***
> --- *** nscription.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW rnapol_iii_promoter AS
>   SELECT
>     feature_id AS rnapol_iii_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'RNApol_III_promoter';
> 
> --- ************************************************
> --- *** relation: caat_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Part of a conserved sequence located abo ***
> --- *** ut 75-bp upstream of the start point of  ***
> --- *** eukaryotic transcription units which may ***
> --- ***  be involved in RNA polymerase binding;  ***
> --- *** consensus=GG(C|T)CAATCT.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW caat_signal AS
>   SELECT
>     feature_id AS caat_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CAAT_signal';
> 
> --- ************************************************
> --- *** relation: gc_rich_promoter_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A conserved GC-rich region located upstr ***
> --- *** eam of the start point of eukaryotic tra ***
> --- *** nscription units which may occur in mult ***
> --- *** iple copies or in either orientation; co ***
> --- *** nsensus=GGGCGG.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW gc_rich_promoter_region AS
>   SELECT
>     feature_id AS gc_rich_promoter_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'GC_rich_promoter_region';
> 
> --- ************************************************
> --- *** relation: tata_box ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A conserved AT-rich septamer found about ***
> --- ***  25-bp before the start point of many eu ***
> --- *** karyotic RNA polymerase II transcript un ***
> --- *** its; may be involved in positioning the  ***
> --- *** enzyme for correct initiation; consensus ***
> --- *** =TATA(A|T)A(A|T).                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW tata_box AS
>   SELECT
>     feature_id AS tata_box_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'TATA_box';
> 
> --- ************************************************
> --- *** relation: minus_10_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A conserved region about 10-bp upstream  ***
> --- *** of the start point of bacterial transcri ***
> --- *** ption units which may be involved in bin ***
> --- *** ding RNA polymerase; consensus=TAtAaT.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW minus_10_signal AS
>   SELECT
>     feature_id AS minus_10_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minus_10_signal';
> 
> --- ************************************************
> --- *** relation: minus_35_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A conserved hexamer about 35-bp upstream ***
> --- ***  of the start point of bacterial transcr ***
> --- *** iption units; consensus=TTGACa or TGTTGA ***
> --- *** CA.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW minus_35_signal AS
>   SELECT
>     feature_id AS minus_35_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minus_35_signal';
> 
> --- ************************************************
> --- *** relation: cross_genome_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A nucleotide match against a sequence fr ***
> --- *** om another organism.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW cross_genome_match AS
>   SELECT
>     feature_id AS cross_genome_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cross_genome_match';
> 
> --- ************************************************
> --- *** relation: operon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A group of contiguous genes transcribed  ***
> --- *** as a single (polycistronic) mRNA from a  ***
> --- *** single regulatory region.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW operon AS
>   SELECT
>     feature_id AS operon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'operon';
> 
> --- ************************************************
> --- *** relation: clone_insert_start ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The start of the clone insert.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW clone_insert_start AS
>   SELECT
>     feature_id AS clone_insert_start_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'clone_insert_start';
> 
> --- ************************************************
> --- *** relation: retrotransposon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transposable element that is incorpora ***
> --- *** ted into a chromosome by a mechanism tha ***
> --- *** t requires reverse transcriptase.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW retrotransposon AS
>   SELECT
>     feature_id AS retrotransposon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'LTR_retrotransposon' OR cvterm.name = 'non_LTR_retrotransposon' OR cvterm.name = 'RR_tract' OR cvterm.name = 'LINE_element' OR cvterm.name = 'SINE_element' OR cvterm.name = 'retrotransposon';
> 
> --- ************************************************
> --- *** relation: translated_nucleotide_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A match against a translated sequence.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW translated_nucleotide_match AS
>   SELECT
>     feature_id AS translated_nucleotide_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'translated_nucleotide_match';
> 
> --- ************************************************
> --- *** relation: dna_transposon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transposon where the mechanism of tran ***
> --- *** sposition is via a DNA intermediate.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW dna_transposon AS
>   SELECT
>     feature_id AS dna_transposon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'terminal_inverted_repeat_element' OR cvterm.name = 'foldback_element' OR cvterm.name = 'conjugative_transposon' OR cvterm.name = 'helitron' OR cvterm.name = 'MITE' OR cvterm.name = 'insertion_sequence' OR cvterm.name = 'polinton' OR cvterm.name = 'DNA_transposon';
> 
> --- ************************************************
> --- *** relation: non_transcribed_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of the gene which is not transc ***
> --- *** ribed.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_transcribed_region AS
>   SELECT
>     feature_id AS non_transcribed_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_transcribed_region';
> 
> --- ************************************************
> --- *** relation: u2_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A major type of spliceosomal intron spli ***
> --- *** ced by the U2 spliceosome, that includes ***
> --- ***  U1, U2, U4/U6 and U5 snRNAs.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW u2_intron AS
>   SELECT
>     feature_id AS u2_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U2_intron';
> 
> --- ************************************************
> --- *** relation: primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that in its initial state r ***
> --- *** equires modification to be functional.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW primary_transcript AS
>   SELECT
>     feature_id AS primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'protein_coding_primary_transcript' OR cvterm.name = 'nc_primary_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'mini_exon_donor_RNA' OR cvterm.name = 'antisense_primary_transcript' OR cvterm.name = 'capped_primary_transcript' OR cvterm.name = 'pre_edited_mRNA' OR cvterm.name = 'scRNA_primary_transcript' OR cvterm.name = 'rRNA_primary_transcript' OR cvterm.name = 'tRNA_primary_transcript' OR cvterm.name = 'snRNA_primary_transcript' OR cvterm.name = 'snoRNA_primary_transcript' OR cvterm.name = 'tmRNA_primary_transcript' OR cvterm.name = 'SRP_RNA_primary_transcript' OR cvterm.name = 'miRNA_primary_transcript' OR cvterm.name = 'rRNA_small_subunit_primary_transcript' OR cvterm.name = 'rRNA_large_subunit_primary_transcript' OR cvterm.name = 'alanine_tRNA_primary_transcript' OR cvterm.name = 'arginine_tRNA_primary_transcript' OR cvterm.name = 'asparagine_tRNA_primary_transcript' OR cvterm.name = 'aspartic_acid_tRNA_primary_transcript' OR cvterm.name = 'cysteine_tRNA_primary_transcript' OR cvterm.name = 'glutamic_acid_tRNA_primary_transcript' OR cvterm.name = 'glutamine_tRNA_primary_transcript' OR cvterm.name = 'glycine_tRNA_primary_transcript' OR cvterm.name = 'histidine_tRNA_primary_transcript' OR cvterm.name = 'isoleucine_tRNA_primary_transcript' OR cvterm.name = 'leucine_tRNA_primary_transcript' OR cvterm.name = 'lysine_tRNA_primary_transcript' OR cvterm.name = 'methionine_tRNA_primary_transcript' OR cvterm.name = 'phenylalanine_tRNA_primary_transcript' OR cvterm.name = 'proline_tRNA_primary_transcript' OR cvterm.name = 'serine_tRNA_primary_transcript' OR cvterm.name = 'threonine_tRNA_primary_transcript' OR cvterm.name = 'tryptophan_tRNA_primary_transcript' OR cvterm.name = 'tyrosine_tRNA_primary_transcript' OR cvterm.name = 'valine_tRNA_primary_transcript' OR cvterm.name = 'pyrrolysine_tRNA_primary_transcript' OR cvterm.name = 'selenocysteine_tRNA_primary_transcript' OR cvterm.name = 'methylation_guide_snoRNA_primary_transcript' OR cvterm.name = 'rRNA_cleavage_snoRNA_primary_transcript' OR cvterm.name = 'C_D_box_snoRNA_primary_transcript' OR cvterm.name = 'H_ACA_box_snoRNA_primary_transcript' OR cvterm.name = 'U14_snoRNA_primary_transcript' OR cvterm.name = 'stRNA_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'primary_transcript';
> 
> --- ************************************************
> --- *** relation: ltr_retrotransposon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A retrotransposon flanked by long termin ***
> --- *** al repeat sequences.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW ltr_retrotransposon AS
>   SELECT
>     feature_id AS ltr_retrotransposon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RR_tract' OR cvterm.name = 'LTR_retrotransposon';
> 
> --- ************************************************
> --- *** relation: intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A segment of DNA that is transcribed, bu ***
> --- *** t removed from within the transcript by  ***
> --- *** splicing together the sequences (exons)  ***
> --- *** on either side of it.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW intron AS
>   SELECT
>     feature_id AS intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_intron' OR cvterm.name = 'interior_intron' OR cvterm.name = 'three_prime_intron' OR cvterm.name = 'twintron' OR cvterm.name = 'UTR_intron' OR cvterm.name = 'autocatalytically_spliced_intron' OR cvterm.name = 'spliceosomal_intron' OR cvterm.name = 'mobile_intron' OR cvterm.name = 'endonuclease_spliced_intron' OR cvterm.name = 'five_prime_UTR_intron' OR cvterm.name = 'three_prime_UTR_intron' OR cvterm.name = 'group_I_intron' OR cvterm.name = 'group_II_intron' OR cvterm.name = 'group_III_intron' OR cvterm.name = 'group_IIA_intron' OR cvterm.name = 'group_IIB_intron' OR cvterm.name = 'U2_intron' OR cvterm.name = 'U12_intron' OR cvterm.name = 'archaeal_intron' OR cvterm.name = 'tRNA_intron' OR cvterm.name = 'intron';
> 
> --- ************************************************
> --- *** relation: non_ltr_retrotransposon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A retrotransposon without long terminal  ***
> --- *** repeat sequences.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_ltr_retrotransposon AS
>   SELECT
>     feature_id AS non_ltr_retrotransposon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'LINE_element' OR cvterm.name = 'SINE_element' OR cvterm.name = 'non_LTR_retrotransposon';
> 
> --- ************************************************
> --- *** relation: five_prime_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_intron AS
>   SELECT
>     feature_id AS five_prime_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_intron';
> 
> --- ************************************************
> --- *** relation: interior_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW interior_intron AS
>   SELECT
>     feature_id AS interior_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'interior_intron';
> 
> --- ************************************************
> --- *** relation: three_prime_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_intron AS
>   SELECT
>     feature_id AS three_prime_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_intron';
> 
> --- ************************************************
> --- *** relation: rflp_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA fragment used as a reagent to dete ***
> --- *** ct the polymorphic genomic loci by hybri ***
> --- *** dizing against the genomic DNA digested  ***
> --- *** with a given restriction enzyme.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW rflp_fragment AS
>   SELECT
>     feature_id AS rflp_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RFLP_fragment';
> 
> --- ************************************************
> --- *** relation: line_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A dispersed repeat family with many copi ***
> --- *** es, each from 1 to 6 kb long. New elemen ***
> --- *** ts are generated by retroposition of a t ***
> --- *** ranscribed copy. Typically the LINE cont ***
> --- *** ains 2 ORF's one of which is reverse tra ***
> --- *** nscriptase, and 3'and 5' direct repeats. ***
> --- ************************************************
> ---
> 
> CREATE VIEW line_element AS
>   SELECT
>     feature_id AS line_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'LINE_element';
> 
> --- ************************************************
> --- *** relation: coding_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An exon whereby at least one base is par ***
> --- *** t of a codon (here, 'codon'nis inclusive ***
> --- ***  of the stop_codon).                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW coding_exon AS
>   SELECT
>     feature_id AS coding_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'interior_coding_exon' OR cvterm.name = 'five_prime_coding_exon' OR cvterm.name = 'three_prime_coding_exon' OR cvterm.name = 'coding_exon';
> 
> --- ************************************************
> --- *** relation: five_prime_coding_exon_coding_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequence of the five_prime_coding_ex ***
> --- *** on that codes for protein.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_coding_exon_coding_region AS
>   SELECT
>     feature_id AS five_prime_coding_exon_coding_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_coding_exon_coding_region';
> 
> --- ************************************************
> --- *** relation: three_prime_coding_exon_coding_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequence of the three_prime_coding_e ***
> --- *** xon that codes for protein.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_coding_exon_coding_region AS
>   SELECT
>     feature_id AS three_prime_coding_exon_coding_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_coding exon_coding_region';
> 
> --- ************************************************
> --- *** relation: noncoding_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An exon that does not contain any codons ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW noncoding_exon AS
>   SELECT
>     feature_id AS noncoding_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_noncoding_exon' OR cvterm.name = 'five_prime_noncoding_exon' OR cvterm.name = 'noncoding_exon';
> 
> --- ************************************************
> --- *** relation: translocation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of nucleotide sequence that has ***
> --- ***  translocated to a new position.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW translocation AS
>   SELECT
>     feature_id AS translocation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'translocation';
> 
> --- ************************************************
> --- *** relation: five_prime_coding_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The 5' most coding exon.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_coding_exon AS
>   SELECT
>     feature_id AS five_prime_coding_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_coding_exon';
> 
> --- ************************************************
> --- *** relation: interior_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An exon that is bounded by 5' and 3' spl ***
> --- *** ice sites.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW interior_exon AS
>   SELECT
>     feature_id AS interior_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'interior_exon';
> 
> --- ************************************************
> --- *** relation: three_prime_coding_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The coding exon that is most 3-prime on  ***
> --- *** a given transcript.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_coding_exon AS
>   SELECT
>     feature_id AS three_prime_coding_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_coding_exon';
> 
> --- ************************************************
> --- *** relation: utr ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Messenger RNA sequences that are untrans ***
> --- *** lated and lie five prime or three prime  ***
> --- *** to sequences which are translated.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW utr AS
>   SELECT
>     feature_id AS utr_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_UTR' OR cvterm.name = 'three_prime_UTR' OR cvterm.name = 'internal_UTR' OR cvterm.name = 'untranslated_region_polycistronic_mRNA' OR cvterm.name = 'UTR';
> 
> --- ************************************************
> --- *** relation: five_prime_utr ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region at the 5' end of a mature trans ***
> --- *** cript (preceding the initiation codon) t ***
> --- *** hat is not translated into a protein.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_utr AS
>   SELECT
>     feature_id AS five_prime_utr_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_UTR';
> 
> --- ************************************************
> --- *** relation: three_prime_utr ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region at the 3' end of a mature trans ***
> --- *** cript (following the stop codon) that is ***
> --- ***  not translated into a protein.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_utr AS
>   SELECT
>     feature_id AS three_prime_utr_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_UTR';
> 
> --- ************************************************
> --- *** relation: sine_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A repetitive element, a few hundred base ***
> --- ***  pairs long, that is dispersed throughou ***
> --- *** t the genome. A common human SINE is the ***
> --- ***  Alu element.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW sine_element AS
>   SELECT
>     feature_id AS sine_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SINE_element';
> 
> --- ************************************************
> --- *** relation: simple_sequence_length_variation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW simple_sequence_length_variation AS
>   SELECT
>     feature_id AS simple_sequence_length_variation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'simple_sequence_length_variation';
> 
> --- ************************************************
> --- *** relation: terminal_inverted_repeat_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA transposable element defined as ha ***
> --- *** ving termini with perfect, or nearly per ***
> --- *** fect short inverted repeats, generally 1 ***
> --- *** 0 - 40 nucleotides long.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW terminal_inverted_repeat_element AS
>   SELECT
>     feature_id AS terminal_inverted_repeat_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'MITE' OR cvterm.name = 'insertion_sequence' OR cvterm.name = 'polinton' OR cvterm.name = 'terminal_inverted_repeat_element';
> 
> --- ************************************************
> --- *** relation: rrna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a ribosoma ***
> --- *** l RNA.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_primary_transcript AS
>   SELECT
>     feature_id AS rrna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_small_subunit_primary_transcript' OR cvterm.name = 'rRNA_large_subunit_primary_transcript' OR cvterm.name = 'rRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a transfer ***
> --- ***  RNA (SO:0000253).                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW trna_primary_transcript AS
>   SELECT
>     feature_id AS trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alanine_tRNA_primary_transcript' OR cvterm.name = 'arginine_tRNA_primary_transcript' OR cvterm.name = 'asparagine_tRNA_primary_transcript' OR cvterm.name = 'aspartic_acid_tRNA_primary_transcript' OR cvterm.name = 'cysteine_tRNA_primary_transcript' OR cvterm.name = 'glutamic_acid_tRNA_primary_transcript' OR cvterm.name = 'glutamine_tRNA_primary_transcript' OR cvterm.name = 'glycine_tRNA_primary_transcript' OR cvterm.name = 'histidine_tRNA_primary_transcript' OR cvterm.name = 'isoleucine_tRNA_primary_transcript' OR cvterm.name = 'leucine_tRNA_primary_transcript' OR cvterm.name = 'lysine_tRNA_primary_transcript' OR cvterm.name = 'methionine_tRNA_primary_transcript' OR cvterm.name = 'phenylalanine_tRNA_primary_transcript' OR cvterm.name = 'proline_tRNA_primary_transcript' OR cvterm.name = 'serine_tRNA_primary_transcript' OR cvterm.name = 'threonine_tRNA_primary_transcript' OR cvterm.name = 'tryptophan_tRNA_primary_transcript' OR cvterm.name = 'tyrosine_tRNA_primary_transcript' OR cvterm.name = 'valine_tRNA_primary_transcript' OR cvterm.name = 'pyrrolysine_tRNA_primary_transcript' OR cvterm.name = 'selenocysteine_tRNA_primary_transcript' OR cvterm.name = 'tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: alanine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding alanyl tRN ***
> --- *** A.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW alanine_trna_primary_transcript AS
>   SELECT
>     feature_id AS alanine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alanine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: arg_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding arginyl tR ***
> --- *** NA (SO:0000255).                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW arg_trna_primary_transcript AS
>   SELECT
>     feature_id AS arg_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'arginine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: asparagine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding asparaginy ***
> --- *** l tRNA (SO:0000256).                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW asparagine_trna_primary_transcript AS
>   SELECT
>     feature_id AS asparagine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asparagine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: aspartic_acid_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding aspartyl t ***
> --- *** RNA (SO:0000257).                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW aspartic_acid_trna_primary_transcript AS
>   SELECT
>     feature_id AS aspartic_acid_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'aspartic_acid_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: cysteine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding cysteinyl  ***
> --- *** tRNA (SO:0000258).                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW cysteine_trna_primary_transcript AS
>   SELECT
>     feature_id AS cysteine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cysteine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: glutamic_acid_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding glutaminyl ***
> --- ***  tRNA (SO:0000260).                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW glutamic_acid_trna_primary_transcript AS
>   SELECT
>     feature_id AS glutamic_acid_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'glutamic_acid_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: glutamine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding glutamyl t ***
> --- *** RNA (SO:0000260).                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW glutamine_trna_primary_transcript AS
>   SELECT
>     feature_id AS glutamine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'glutamine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: glycine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding glycyl tRN ***
> --- *** A (SO:0000263).                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW glycine_trna_primary_transcript AS
>   SELECT
>     feature_id AS glycine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'glycine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: histidine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding histidyl t ***
> --- *** RNA (SO:0000262).                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW histidine_trna_primary_transcript AS
>   SELECT
>     feature_id AS histidine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'histidine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: isoleucine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding isoleucyl  ***
> --- *** tRNA (SO:0000263).                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW isoleucine_trna_primary_transcript AS
>   SELECT
>     feature_id AS isoleucine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'isoleucine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: leucine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding leucyl tRN ***
> --- *** A (SO:0000264).                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW leucine_trna_primary_transcript AS
>   SELECT
>     feature_id AS leucine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'leucine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: lysine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding lysyl tRNA ***
> --- ***  (SO:0000265).                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW lysine_trna_primary_transcript AS
>   SELECT
>     feature_id AS lysine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'lysine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: methionine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding methionyl  ***
> --- *** tRNA (SO:0000266).                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW methionine_trna_primary_transcript AS
>   SELECT
>     feature_id AS methionine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methionine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: phe_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding phenylalan ***
> --- *** yl tRNA (SO:0000267).                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW phe_trna_primary_transcript AS
>   SELECT
>     feature_id AS phe_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'phenylalanine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: proline_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding prolyl tRN ***
> --- *** A (SO:0000268).                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW proline_trna_primary_transcript AS
>   SELECT
>     feature_id AS proline_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'proline_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: serine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding seryl tRNA ***
> --- ***  (SO:000269).                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW serine_trna_primary_transcript AS
>   SELECT
>     feature_id AS serine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'serine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: thr_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding threonyl t ***
> --- *** RNA (SO:000270).                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW thr_trna_primary_transcript AS
>   SELECT
>     feature_id AS thr_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'threonine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: try_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding tryptophan ***
> --- *** yl tRNA (SO:000271).                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW try_trna_primary_transcript AS
>   SELECT
>     feature_id AS try_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tryptophan_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: tyrosine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding tyrosyl tR ***
> --- *** NA (SO:000272).                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW tyrosine_trna_primary_transcript AS
>   SELECT
>     feature_id AS tyrosine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tyrosine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: valine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding valyl tRNA ***
> --- ***  (SO:000273).                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW valine_trna_primary_transcript AS
>   SELECT
>     feature_id AS valine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'valine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: snrna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a small nu ***
> --- *** clear RNA (SO:0000274).                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW snrna_primary_transcript AS
>   SELECT
>     feature_id AS snrna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'snRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: snorna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a small nu ***
> --- *** cleolar mRNA (SO:0000275).               ***
> --- ************************************************
> ---
> 
> CREATE VIEW snorna_primary_transcript AS
>   SELECT
>     feature_id AS snorna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylation_guide_snoRNA_primary_transcript' OR cvterm.name = 'rRNA_cleavage_snoRNA_primary_transcript' OR cvterm.name = 'C_D_box_snoRNA_primary_transcript' OR cvterm.name = 'H_ACA_box_snoRNA_primary_transcript' OR cvterm.name = 'U14_snoRNA_primary_transcript' OR cvterm.name = 'snoRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: mature_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript which has undergone the nec ***
> --- *** essary modifications, if any, for its fu ***
> --- *** nction. In eukaryotes this includes, for ***
> --- ***  example, processing of introns, cleavag ***
> --- *** e, base modification, and modifications  ***
> --- *** to the 5' and/or the 3' ends, other than ***
> --- ***  addition of bases. In bacteria function ***
> --- *** al mRNAs are usually not modified.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW mature_transcript AS
>   SELECT
>     feature_id AS mature_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA' OR cvterm.name = 'ncRNA' OR cvterm.name = 'mRNA_with_frameshift' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'exemplar_mRNA' OR cvterm.name = 'capped_mRNA' OR cvterm.name = 'polyadenylated_mRNA' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'recoded_mRNA' OR cvterm.name = 'mRNA_with_minus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_2_frameshift' OR cvterm.name = 'mRNA_with_minus_2_frameshift' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'mRNA_recoded_by_translational_bypass' OR cvterm.name = 'mRNA_recoded_by_codon_redefinition' OR cvterm.name = 'scRNA' OR cvterm.name = 'rRNA' OR cvterm.name = 'tRNA' OR cvterm.name = 'snRNA' OR cvterm.name = 'snoRNA' OR cvterm.name = 'small_regulatory_ncRNA' OR cvterm.name = 'RNase_MRP_RNA' OR cvterm.name = 'RNase_P_RNA' OR cvterm.name = 'telomerase_RNA' OR cvterm.name = 'vault_RNA' OR cvterm.name = 'Y_RNA' OR cvterm.name = 'rasiRNA' OR cvterm.name = 'SRP_RNA' OR cvterm.name = 'guide_RNA' OR cvterm.name = 'antisense_RNA' OR cvterm.name = 'siRNA' OR cvterm.name = 'stRNA' OR cvterm.name = 'class_II_RNA' OR cvterm.name = 'class_I_RNA' OR cvterm.name = 'piRNA' OR cvterm.name = 'lincRNA' OR cvterm.name = 'rRNA_cleavage_RNA' OR cvterm.name = 'small_subunit_rRNA' OR cvterm.name = 'large_subunit_rRNA' OR cvterm.name = 'rRNA_18S' OR cvterm.name = 'rRNA_16S' OR cvterm.name = 'rRNA_5_8S' OR cvterm.name = 'rRNA_5S' OR cvterm.name = 'rRNA_28S' OR cvterm.name = 'rRNA_23S' OR cvterm.name = 'rRNA_25S' OR cvterm.name = 'rRNA_21S' OR cvterm.name = 'alanyl_tRNA' OR cvterm.name = 'asparaginyl_tRNA' OR cvterm.name = 'aspartyl_tRNA' OR cvterm.name = 'cysteinyl_tRNA' OR cvterm.name = 'glutaminyl_tRNA' OR cvterm.name = 'glutamyl_tRNA' OR cvterm.name = 'glycyl_tRNA' OR cvterm.name = 'histidyl_tRNA' OR cvterm.name = 'isoleucyl_tRNA' OR cvterm.name = 'leucyl_tRNA' OR cvterm.name = 'lysyl_tRNA' OR cvterm.name = 'methionyl_tRNA' OR cvterm.name = 'phenylalanyl_tRNA' OR cvterm.name = 'prolyl_tRNA' OR cvterm.name = 'seryl_tRNA' OR cvterm.name = 'threonyl_tRNA' OR cvterm.name = 'tryptophanyl_tRNA' OR cvterm.name = 'tyrosyl_tRNA' OR cvterm.name = 'valyl_tRNA' OR cvterm.name = 'pyrrolysyl_tRNA' OR cvterm.name = 'arginyl_tRNA' OR cvterm.name = 'selenocysteinyl_tRNA' OR cvterm.name = 'U1_snRNA' OR cvterm.name = 'U2_snRNA' OR cvterm.name = 'U4_snRNA' OR cvterm.name = 'U4atac_snRNA' OR cvterm.name = 'U5_snRNA' OR cvterm.name = 'U6_snRNA' OR cvterm.name = 'U6atac_snRNA' OR cvterm.name = 'U11_snRNA' OR cvterm.name = 'U12_snRNA' OR cvterm.name = 'C_D_box_snoRNA' OR cvterm.name = 'H_ACA_box_snoRNA' OR cvterm.name = 'U14_snoRNA' OR cvterm.name = 'U3_snoRNA' OR cvterm.name = 'methylation_guide_snoRNA' OR cvterm.name = 'pseudouridylation_guide_snoRNA' OR cvterm.name = 'miRNA' OR cvterm.name = 'RNA_6S' OR cvterm.name = 'CsrB_RsmB_RNA' OR cvterm.name = 'DsrA_RNA' OR cvterm.name = 'OxyS_RNA' OR cvterm.name = 'RprA_RNA' OR cvterm.name = 'RRE_RNA' OR cvterm.name = 'spot_42_RNA' OR cvterm.name = 'tmRNA' OR cvterm.name = 'GcvB_RNA' OR cvterm.name = 'MicF_RNA' OR cvterm.name = 'mature_transcript';
> 
> --- ************************************************
> --- *** relation: mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Messenger RNA is the intermediate molecu ***
> --- *** le between DNA and protein. It includes  ***
> --- *** UTR and coding sequences. It does not co ***
> --- *** ntain introns.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna AS
>   SELECT
>     feature_id AS mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_with_frameshift' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'exemplar_mRNA' OR cvterm.name = 'capped_mRNA' OR cvterm.name = 'polyadenylated_mRNA' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'recoded_mRNA' OR cvterm.name = 'mRNA_with_minus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_2_frameshift' OR cvterm.name = 'mRNA_with_minus_2_frameshift' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'mRNA_recoded_by_translational_bypass' OR cvterm.name = 'mRNA_recoded_by_codon_redefinition' OR cvterm.name = 'mRNA';
> 
> --- ************************************************
> --- *** relation: tf_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a molecule that binds a TF c ***
> --- *** omplex [GO:0005667].                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW tf_binding_site AS
>   SELECT
>     feature_id AS tf_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'TF_binding_site';
> 
> --- ************************************************
> --- *** relation: orf ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The inframe interval between the stop co ***
> --- *** dons of a reading frame which when read  ***
> --- *** as sequential triplets, has the potentia ***
> --- *** l of encoding a sequential string of ami ***
> --- *** no acids. TER(NNN)nTER.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW orf AS
>   SELECT
>     feature_id AS orf_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mini_gene' OR cvterm.name = 'rescue_mini_gene' OR cvterm.name = 'ORF';
> 
> --- ************************************************
> --- *** relation: transcript_attribute ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcript_attribute AS
>   SELECT
>     feature_id AS transcript_attribute_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'edited' OR cvterm.name = 'capped' OR cvterm.name = 'mRNA_attribute' OR cvterm.name = 'trans_spliced' OR cvterm.name = 'alternatively_spliced' OR cvterm.name = 'monocistronic' OR cvterm.name = 'polycistronic' OR cvterm.name = 'polyadenylated' OR cvterm.name = 'exemplar' OR cvterm.name = 'frameshift' OR cvterm.name = 'recoded' OR cvterm.name = 'minus_1_frameshift' OR cvterm.name = 'minus_2_frameshift' OR cvterm.name = 'plus_1_frameshift' OR cvterm.name = 'plus_2_framshift' OR cvterm.name = 'codon_redefined' OR cvterm.name = 'recoded_by_translational_bypass' OR cvterm.name = 'translationally_frameshifted' OR cvterm.name = 'minus_1_translationally_frameshifted' OR cvterm.name = 'plus_1_translationally_frameshifted' OR cvterm.name = 'dicistronic' OR cvterm.name = 'transcript_attribute';
> 
> --- ************************************************
> --- *** relation: foldback_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transposable element with extensive se ***
> --- *** condary structure, characterised by larg ***
> --- *** e modular imperfect long inverted repeat ***
> --- *** s.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW foldback_element AS
>   SELECT
>     feature_id AS foldback_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'foldback_element';
> 
> --- ************************************************
> --- *** relation: flanking_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequences extending on either side o ***
> --- *** f a specific region.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW flanking_region AS
>   SELECT
>     feature_id AS flanking_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transposable_element_flanking_region' OR cvterm.name = 'five_prime_flanking_region' OR cvterm.name = 'three_prime_flanking_region' OR cvterm.name = 'flanking_region';
> 
> --- ************************************************
> --- *** relation: chromosome_variation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome_variation AS
>   SELECT
>     feature_id AS chromosome_variation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'assortment_derived_duplication' OR cvterm.name = 'assortment_derived_deficiency_plus_duplication' OR cvterm.name = 'assortment_derived_deficiency' OR cvterm.name = 'assortment_derived_aneuploid' OR cvterm.name = 'chromosome_number_variation' OR cvterm.name = 'chromosome_structure_variation' OR cvterm.name = 'aneuploid' OR cvterm.name = 'polyploid' OR cvterm.name = 'hyperploid' OR cvterm.name = 'hypoploid' OR cvterm.name = 'autopolyploid' OR cvterm.name = 'allopolyploid' OR cvterm.name = 'free_chromosome_arm' OR cvterm.name = 'transposition' OR cvterm.name = 'aneuploid_chromosome' OR cvterm.name = 'intrachromosomal_mutation' OR cvterm.name = 'interchromosomal_mutation' OR cvterm.name = 'compound_chromosome' OR cvterm.name = 'autosynaptic_chromosome' OR cvterm.name = 'complex_chromosomal_mutation' OR cvterm.name = 'uncharacterised_chromosomal_mutation' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'interchromosomal_transposition' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'deficient_interchromosomal_transposition' OR cvterm.name = 'inverted_interchromosomal_transposition' OR cvterm.name = 'uninverted_interchromosomal_transposition' OR cvterm.name = 'unorientated_interchromosomal_transposition' OR cvterm.name = 'inversion_derived_aneuploid_chromosome' OR cvterm.name = 'chromosomal_deletion' OR cvterm.name = 'chromosomal_duplication' OR cvterm.name = 'inversion_derived_bipartite_deficiency' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_aneuploid' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'interchromosomal_duplication' OR cvterm.name = 'intrachromosomal_duplication' OR cvterm.name = 'free_duplication' OR cvterm.name = 'insertional_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_bipartite_duplication' OR cvterm.name = 'inversion_derived_duplication_plus_aneuploid' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'tandem_duplication' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'direct_tandem_duplication' OR cvterm.name = 'inverted_tandem_duplication' OR cvterm.name = 'free_ring_duplication' OR cvterm.name = 'uninverted_insertional_duplication' OR cvterm.name = 'inverted_insertional_duplication' OR cvterm.name = 'unoriented_insertional_duplication' OR cvterm.name = 'chromosomal_deletion' OR cvterm.name = 'chromosomal_inversion' OR cvterm.name = 'intrachromosomal_duplication' OR cvterm.name = 'ring_chromosome' OR cvterm.name = 'chromosome_fission' OR cvterm.name = 'inversion_derived_bipartite_deficiency' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_aneuploid' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'inverted_ring_chromosome' OR cvterm.name = 'pericentric_inversion' OR cvterm.name = 'paracentric_inversion' OR cvterm.name = 'inversion_cum_translocation' OR cvterm.name = 'bipartite_inversion' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_bipartite_duplication' OR cvterm.name = 'inversion_derived_duplication_plus_aneuploid' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'tandem_duplication' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'direct_tandem_duplication' OR cvterm.name = 'inverted_tandem_duplication' OR cvterm.name = 'inverted_ring_chromosome' OR cvterm.name = 'free_ring_duplication' OR cvterm.name = 'chromosomal_translocation' OR cvterm.name = 'bipartite_duplication' OR cvterm.name = 'interchromosomal_transposition' OR cvterm.name = 'translocation_element' OR cvterm.name = 'Robertsonian_fusion' OR cvterm.name = 'reciprocal_chromosomal_translocation' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'inversion_cum_translocation' OR cvterm.name = 'cyclic_translocation' OR cvterm.name = 'deficient_interchromosomal_transposition' OR cvterm.name = 'inverted_interchromosomal_transposition' OR cvterm.name = 'uninverted_interchromosomal_transposition' OR cvterm.name = 'unorientated_interchromosomal_transposition' OR cvterm.name = 'compound_chromosome_arm' OR cvterm.name = 'homo_compound_chromosome' OR cvterm.name = 'hetero_compound_chromosome' OR cvterm.name = 'dexstrosynaptic_chromosome' OR cvterm.name = 'laevosynaptic_chromosome' OR cvterm.name = 'partially_characterised_chromosomal_mutation' OR cvterm.name = 'chromosome_variation';
> 
> --- ************************************************
> --- *** relation: internal_utr ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A UTR bordered by the terminal and initi ***
> --- *** al codons of two CDSs in a polycistronic ***
> --- ***  transcript. Every UTR is either 5', 3'  ***
> --- *** or internal.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW internal_utr AS
>   SELECT
>     feature_id AS internal_utr_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_UTR';
> 
> --- ************************************************
> --- *** relation: untranslated_region_polycistronic_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The untranslated sequence separating the ***
> --- ***  'cistrons' of multicistronic mRNA.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW untranslated_region_polycistronic_mrna AS
>   SELECT
>     feature_id AS untranslated_region_polycistronic_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'untranslated_region_polycistronic_mRNA';
> 
> --- ************************************************
> --- *** relation: internal_ribosome_entry_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Sequence element that recruits a ribosom ***
> --- *** al subunit to internal mRNA for translat ***
> --- *** ion initiation.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW internal_ribosome_entry_site AS
>   SELECT
>     feature_id AS internal_ribosome_entry_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'internal_ribosome_entry_site';
> 
> --- ************************************************
> --- *** relation: polyadenylated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A attribute describing the addition of a ***
> --- ***  poly A tail to the 3' end of a mRNA mol ***
> --- *** ecule.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW polyadenylated AS
>   SELECT
>     feature_id AS polyadenylated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polyadenylated';
> 
> --- ************************************************
> --- *** relation: sequence_length_variation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_length_variation AS
>   SELECT
>     feature_id AS sequence_length_variation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'simple_sequence_length_variation' OR cvterm.name = 'sequence_length_variation';
> 
> --- ************************************************
> --- *** relation: modified_rna_base_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post_transcriptionally modified base.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_rna_base_feature AS
>   SELECT
>     feature_id AS modified_rna_base_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inosine' OR cvterm.name = 'seven_methylguanine' OR cvterm.name = 'ribothymidine' OR cvterm.name = 'modified_adenosine' OR cvterm.name = 'modified_cytidine' OR cvterm.name = 'modified_guanosine' OR cvterm.name = 'modified_uridine' OR cvterm.name = 'modified_inosine' OR cvterm.name = 'methylinosine' OR cvterm.name = 'one_methylinosine' OR cvterm.name = 'one_two_prime_O_dimethylinosine' OR cvterm.name = 'two_prime_O_methylinosine' OR cvterm.name = 'one_methyladenosine' OR cvterm.name = 'two_methyladenosine' OR cvterm.name = 'N6_methyladenosine' OR cvterm.name = 'two_prime_O_methyladenosine' OR cvterm.name = 'two_methylthio_N6_methyladenosine' OR cvterm.name = 'N6_isopentenyladenosine' OR cvterm.name = 'two_methylthio_N6_isopentenyladenosine' OR cvterm.name = 'N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'two_methylthio_N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'N6_glycinylcarbamoyladenosine' OR cvterm.name = 'N6_threonylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_threonyl_carbamoyladenosine' OR cvterm.name = 'N6_methyl_N6_threonylcarbamoyladenosine' OR cvterm.name = 'N6_hydroxynorvalylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine' OR cvterm.name = 'two_prime_O_ribosyladenosine_phosphate' OR cvterm.name = 'N6_N6_dimethyladenosine' OR cvterm.name = 'N6_2_prime_O_dimethyladenosine' OR cvterm.name = 'N6_N6_2_prime_O_trimethyladenosine' OR cvterm.name = 'one_two_prime_O_dimethyladenosine' OR cvterm.name = 'N6_acetyladenosine' OR cvterm.name = 'three_methylcytidine' OR cvterm.name = 'five_methylcytidine' OR cvterm.name = 'two_prime_O_methylcytidine' OR cvterm.name = 'two_thiocytidine' OR cvterm.name = 'N4_acetylcytidine' OR cvterm.name = 'five_formylcytidine' OR cvterm.name = 'five_two_prime_O_dimethylcytidine' OR cvterm.name = 'N4_acetyl_2_prime_O_methylcytidine' OR cvterm.name = 'lysidine' OR cvterm.name = 'N4_methylcytidine' OR cvterm.name = 'N4_2_prime_O_dimethylcytidine' OR cvterm.name = 'five_hydroxymethylcytidine' OR cvterm.name = 'five_formyl_two_prime_O_methylcytidine' OR cvterm.name = 'N4_N4_2_prime_O_trimethylcytidine' OR cvterm.name = 'seven_deazaguanosine' OR cvterm.name = 'one_methylguanosine' OR cvterm.name = 'N2_methylguanosine' OR cvterm.name = 'seven_methylguanosine' OR cvterm.name = 'two_prime_O_methylguanosine' OR cvterm.name = 'N2_N2_dimethylguanosine' OR cvterm.name = 'N2_2_prime_O_dimethylguanosine' OR cvterm.name = 'N2_N2_2_prime_O_trimethylguanosine' OR cvterm.name = 'two_prime_O_ribosylguanosine_phosphate' OR cvterm.name = 'wybutosine' OR cvterm.name = 'peroxywybutosine' OR cvterm.name = 'hydroxywybutosine' OR cvterm.name = 'undermodified_hydroxywybutosine' OR cvterm.name = 'wyosine' OR cvterm.name = 'methylwyosine' OR cvterm.name = 'N2_7_dimethylguanosine' OR cvterm.name = 'N2_N2_7_trimethylguanosine' OR cvterm.name = 'one_two_prime_O_dimethylguanosine' OR cvterm.name = 'four_demethylwyosine' OR cvterm.name = 'isowyosine' OR cvterm.name = 'N2_7_2prirme_O_trimethylguanosine' OR cvterm.name = 'queuosine' OR cvterm.name = 'epoxyqueuosine' OR cvterm.name = 'galactosyl_queuosine' OR cvterm.name = 'mannosyl_queuosine' OR cvterm.name = 'seven_cyano_seven_deazaguanosine' OR cvterm.name = 'seven_aminomethyl_seven_deazaguanosine' OR cvterm.name = 'archaeosine' OR cvterm.name = 'dihydrouridine' OR cvterm.name = 'pseudouridine' OR cvterm.name = 'five_methyluridine' OR cvterm.name = 'two_prime_O_methyluridine' OR cvterm.name = 'five_two_prime_O_dimethyluridine' OR cvterm.name = 'one_methylpseudouridine' OR cvterm.name = 'two_prime_O_methylpseudouridine' OR cvterm.name = 'two_thiouridine' OR cvterm.name = 'four_thiouridine' OR cvterm.name = 'five_methyl_2_thiouridine' OR cvterm.name = 'two_thio_two_prime_O_methyluridine' OR cvterm.name = 'three_three_amino_three_carboxypropyl_uridine' OR cvterm.name = 'five_hydroxyuridine' OR cvterm.name = 'five_methoxyuridine' OR cvterm.name = 'uridine_five_oxyacetic_acid' OR cvterm.name = 'uridine_five_oxyacetic_acid_methyl_ester' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine_methyl_ester' OR cvterm.name = 'five_methoxycarbonylmethyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_thiouridine' OR cvterm.name = 'five_aminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyluridine' OR cvterm.name = 'five_methylaminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyl_two_selenouridine' OR cvterm.name = 'five_carbamoylmethyluridine' OR cvterm.name = 'five_carbamoylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_thiouridine' OR cvterm.name = 'three_methyluridine' OR cvterm.name = 'one_methyl_three_three_amino_three_carboxypropyl_pseudouridine' OR cvterm.name = 'five_carboxymethyluridine' OR cvterm.name = 'three_two_prime_O_dimethyluridine' OR cvterm.name = 'five_methyldihydrouridine' OR cvterm.name = 'three_methylpseudouridine' OR cvterm.name = 'five_taurinomethyluridine' OR cvterm.name = 'five_taurinomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_uridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'modified_RNA_base_feature';
> 
> --- ************************************************
> --- *** relation: rrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** RNA that comprises part of a ribosome, a ***
> --- *** nd that can provide both structural scaf ***
> --- *** folding and catalytic activity.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna AS
>   SELECT
>     feature_id AS rrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'small_subunit_rRNA' OR cvterm.name = 'large_subunit_rRNA' OR cvterm.name = 'rRNA_18S' OR cvterm.name = 'rRNA_16S' OR cvterm.name = 'rRNA_5_8S' OR cvterm.name = 'rRNA_5S' OR cvterm.name = 'rRNA_28S' OR cvterm.name = 'rRNA_23S' OR cvterm.name = 'rRNA_25S' OR cvterm.name = 'rRNA_21S' OR cvterm.name = 'rRNA';
> 
> --- ************************************************
> --- *** relation: trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Transfer RNA (tRNA) molecules are approx ***
> --- *** imately 80 nucleotides in length. Their  ***
> --- *** secondary structure includes four short  ***
> --- *** double-helical elements and three loops  ***
> --- *** (D, anti-codon, and T loops). Further hy ***
> --- *** drogen bonds mediate the characteristic  ***
> --- *** L-shaped molecular structure. Transfer R ***
> --- *** NAs have two regions of fundamental func ***
> --- *** tional importance: the anti-codon, which ***
> --- ***  is responsible for specific mRNA codon  ***
> --- *** recognition, and the 3' end, to which th ***
> --- *** e tRNA's corresponding amino acid is att ***
> --- *** ached (by aminoacyl-tRNA synthetases). T ***
> --- *** ransfer RNAs cope with the degeneracy of ***
> --- ***  the genetic code in two manners: having ***
> --- ***  more than one tRNA (with a specific ant ***
> --- *** i-codon) for a particular amino acid; an ***
> --- *** d 'wobble' base-pairing, i.e. permitting ***
> --- ***  non-standard base-pairing at the 3rd an ***
> --- *** ti-codon position.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW trna AS
>   SELECT
>     feature_id AS trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alanyl_tRNA' OR cvterm.name = 'asparaginyl_tRNA' OR cvterm.name = 'aspartyl_tRNA' OR cvterm.name = 'cysteinyl_tRNA' OR cvterm.name = 'glutaminyl_tRNA' OR cvterm.name = 'glutamyl_tRNA' OR cvterm.name = 'glycyl_tRNA' OR cvterm.name = 'histidyl_tRNA' OR cvterm.name = 'isoleucyl_tRNA' OR cvterm.name = 'leucyl_tRNA' OR cvterm.name = 'lysyl_tRNA' OR cvterm.name = 'methionyl_tRNA' OR cvterm.name = 'phenylalanyl_tRNA' OR cvterm.name = 'prolyl_tRNA' OR cvterm.name = 'seryl_tRNA' OR cvterm.name = 'threonyl_tRNA' OR cvterm.name = 'tryptophanyl_tRNA' OR cvterm.name = 'tyrosyl_tRNA' OR cvterm.name = 'valyl_tRNA' OR cvterm.name = 'pyrrolysyl_tRNA' OR cvterm.name = 'arginyl_tRNA' OR cvterm.name = 'selenocysteinyl_tRNA' OR cvterm.name = 'tRNA';
> 
> --- ************************************************
> --- *** relation: alanyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has an alanine anti ***
> --- *** codon, and a 3' alanine binding region.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW alanyl_trna AS
>   SELECT
>     feature_id AS alanyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alanyl_tRNA';
> 
> --- ************************************************
> --- *** relation: rrna_small_subunit_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a small ri ***
> --- *** bosomal subunit RNA.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_small_subunit_primary_transcript AS
>   SELECT
>     feature_id AS rrna_small_subunit_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_small_subunit_primary_transcript';
> 
> --- ************************************************
> --- *** relation: asparaginyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has an asparagine a ***
> --- *** nticodon, and a 3' asparagine binding re ***
> --- *** gion.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW asparaginyl_trna AS
>   SELECT
>     feature_id AS asparaginyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asparaginyl_tRNA';
> 
> --- ************************************************
> --- *** relation: aspartyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has an aspartic aci ***
> --- *** d anticodon, and a 3' aspartic acid bind ***
> --- *** ing region.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW aspartyl_trna AS
>   SELECT
>     feature_id AS aspartyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'aspartyl_tRNA';
> 
> --- ************************************************
> --- *** relation: cysteinyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a cysteine anti ***
> --- *** codon, and a 3' cysteine binding region. ***
> --- ************************************************
> ---
> 
> CREATE VIEW cysteinyl_trna AS
>   SELECT
>     feature_id AS cysteinyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cysteinyl_tRNA';
> 
> --- ************************************************
> --- *** relation: glutaminyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a glutamine ant ***
> --- *** icodon, and a 3' glutamine binding regio ***
> --- *** n.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW glutaminyl_trna AS
>   SELECT
>     feature_id AS glutaminyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'glutaminyl_tRNA';
> 
> --- ************************************************
> --- *** relation: glutamyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a glutamic acid ***
> --- ***  anticodon, and a 3' glutamic acid bindi ***
> --- *** ng region.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW glutamyl_trna AS
>   SELECT
>     feature_id AS glutamyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'glutamyl_tRNA';
> 
> --- ************************************************
> --- *** relation: glycyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a glycine antic ***
> --- *** odon, and a 3' glycine binding region.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW glycyl_trna AS
>   SELECT
>     feature_id AS glycyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'glycyl_tRNA';
> 
> --- ************************************************
> --- *** relation: histidyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a histidine ant ***
> --- *** icodon, and a 3' histidine binding regio ***
> --- *** n.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW histidyl_trna AS
>   SELECT
>     feature_id AS histidyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'histidyl_tRNA';
> 
> --- ************************************************
> --- *** relation: isoleucyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has an isoleucine a ***
> --- *** nticodon, and a 3' isoleucine binding re ***
> --- *** gion.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW isoleucyl_trna AS
>   SELECT
>     feature_id AS isoleucyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'isoleucyl_tRNA';
> 
> --- ************************************************
> --- *** relation: leucyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a leucine antic ***
> --- *** odon, and a 3' leucine binding region.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW leucyl_trna AS
>   SELECT
>     feature_id AS leucyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'leucyl_tRNA';
> 
> --- ************************************************
> --- *** relation: lysyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a lysine antico ***
> --- *** don, and a 3' lysine binding region.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW lysyl_trna AS
>   SELECT
>     feature_id AS lysyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'lysyl_tRNA';
> 
> --- ************************************************
> --- *** relation: methionyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a methionine an ***
> --- *** ticodon, and a 3' methionine binding reg ***
> --- *** ion.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW methionyl_trna AS
>   SELECT
>     feature_id AS methionyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methionyl_tRNA';
> 
> --- ************************************************
> --- *** relation: phenylalanyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a phenylalanine ***
> --- ***  anticodon, and a 3' phenylalanine bindi ***
> --- *** ng region.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW phenylalanyl_trna AS
>   SELECT
>     feature_id AS phenylalanyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'phenylalanyl_tRNA';
> 
> --- ************************************************
> --- *** relation: prolyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a proline antic ***
> --- *** odon, and a 3' proline binding region.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW prolyl_trna AS
>   SELECT
>     feature_id AS prolyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'prolyl_tRNA';
> 
> --- ************************************************
> --- *** relation: seryl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a serine antico ***
> --- *** don, and a 3' serine binding region.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW seryl_trna AS
>   SELECT
>     feature_id AS seryl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'seryl_tRNA';
> 
> --- ************************************************
> --- *** relation: threonyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a threonine ant ***
> --- *** icodon, and a 3' threonine binding regio ***
> --- *** n.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW threonyl_trna AS
>   SELECT
>     feature_id AS threonyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'threonyl_tRNA';
> 
> --- ************************************************
> --- *** relation: tryptophanyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a tryptophan an ***
> --- *** ticodon, and a 3' tryptophan binding reg ***
> --- *** ion.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW tryptophanyl_trna AS
>   SELECT
>     feature_id AS tryptophanyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tryptophanyl_tRNA';
> 
> --- ************************************************
> --- *** relation: tyrosyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a tyrosine anti ***
> --- *** codon, and a 3' tyrosine binding region. ***
> --- ************************************************
> ---
> 
> CREATE VIEW tyrosyl_trna AS
>   SELECT
>     feature_id AS tyrosyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tyrosyl_tRNA';
> 
> --- ************************************************
> --- *** relation: valyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a valine antico ***
> --- *** don, and a 3' valine binding region.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW valyl_trna AS
>   SELECT
>     feature_id AS valyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'valyl_tRNA';
> 
> --- ************************************************
> --- *** relation: snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A small nuclear RNA molecule involved in ***
> --- ***  pre-mRNA splicing and processing.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW snrna AS
>   SELECT
>     feature_id AS snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U1_snRNA' OR cvterm.name = 'U2_snRNA' OR cvterm.name = 'U4_snRNA' OR cvterm.name = 'U4atac_snRNA' OR cvterm.name = 'U5_snRNA' OR cvterm.name = 'U6_snRNA' OR cvterm.name = 'U6atac_snRNA' OR cvterm.name = 'U11_snRNA' OR cvterm.name = 'U12_snRNA' OR cvterm.name = 'snRNA';
> 
> --- ************************************************
> --- *** relation: snorna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A snoRNA (small nucleolar RNA) is any on ***
> --- *** e of a class of small RNAs that are asso ***
> --- *** ciated with the eukaryotic nucleus as co ***
> --- *** mponents of small nucleolar ribonucleopr ***
> --- *** oteins. They participate in the processi ***
> --- *** ng or modifications of many RNAs, mostly ***
> --- ***  ribosomal RNAs (rRNAs) though snoRNAs a ***
> --- *** re also known to target other classes of ***
> --- ***  RNA, including spliceosomal RNAs, tRNAs ***
> --- *** , and mRNAs via a stretch of sequence th ***
> --- *** at is complementary to a sequence in the ***
> --- ***  targeted RNA.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW snorna AS
>   SELECT
>     feature_id AS snorna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_D_box_snoRNA' OR cvterm.name = 'H_ACA_box_snoRNA' OR cvterm.name = 'U14_snoRNA' OR cvterm.name = 'U3_snoRNA' OR cvterm.name = 'methylation_guide_snoRNA' OR cvterm.name = 'pseudouridylation_guide_snoRNA' OR cvterm.name = 'snoRNA';
> 
> --- ************************************************
> --- *** relation: mirna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Small, ~22-nt, RNA molecule that is the  ***
> --- *** endogenous transcript of a miRNA gene. M ***
> --- *** icro RNAs are produced from precursor mo ***
> --- *** lecules (SO:0000647) that can form local ***
> --- ***  hairpin structures, which ordinarily ar ***
> --- *** e processed (via the Dicer pathway) such ***
> --- ***  that a single miRNA molecule accumulate ***
> --- *** s from one arm of a hairpin precursor mo ***
> --- *** lecule. Micro RNAs may trigger the cleav ***
> --- *** age of their target molecules or act as  ***
> --- *** translational repressors.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirna AS
>   SELECT
>     feature_id AS mirna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'miRNA';
> 
> --- ************************************************
> --- *** relation: bound_by_factor ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence that  ***
> --- *** is bound by another molecule.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW bound_by_factor AS
>   SELECT
>     feature_id AS bound_by_factor_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'bound_by_protein' OR cvterm.name = 'bound_by_nucleic_acid' OR cvterm.name = 'bound_by_factor';
> 
> --- ************************************************
> --- *** relation: transcript_bound_by_nucleic_acid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that is bound by a nucleic  ***
> --- *** acid.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcript_bound_by_nucleic_acid AS
>   SELECT
>     feature_id AS transcript_bound_by_nucleic_acid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcript_bound_by_nucleic_acid';
> 
> --- ************************************************
> --- *** relation: transcript_bound_by_protein ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that is bound by a protein. ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcript_bound_by_protein AS
>   SELECT
>     feature_id AS transcript_bound_by_protein_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcript_bound_by_protein';
> 
> --- ************************************************
> --- *** relation: engineered_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is engineered.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_gene AS
>   SELECT
>     feature_id AS engineered_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_gene';
> 
> --- ************************************************
> --- *** relation: engineered_foreign_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is engineered and foreign.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_foreign_gene AS
>   SELECT
>     feature_id AS engineered_foreign_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_foreign_gene';
> 
> --- ************************************************
> --- *** relation: mrna_with_minus_1_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA with a minus 1 frameshift.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna_with_minus_1_frameshift AS
>   SELECT
>     feature_id AS mrna_with_minus_1_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_with_minus_1_frameshift';
> 
> --- ************************************************
> --- *** relation: engineered_foreign_transposable_element_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transposible_element that is engineere ***
> --- *** d and foreign.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_foreign_transposable_element_gene AS
>   SELECT
>     feature_id AS engineered_foreign_transposable_element_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_transposable_element_gene';
> 
> --- ************************************************
> --- *** relation: foreign_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is foreign.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW foreign_gene AS
>   SELECT
>     feature_id AS foreign_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'foreign_gene';
> 
> --- ************************************************
> --- *** relation: long_terminal_repeat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence directly repeated at both end ***
> --- *** s of a defined sequence, of the sort typ ***
> --- *** ically found in retroviruses.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW long_terminal_repeat AS
>   SELECT
>     feature_id AS long_terminal_repeat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_LTR' OR cvterm.name = 'three_prime_LTR' OR cvterm.name = 'solo_LTR' OR cvterm.name = 'long_terminal_repeat';
> 
> --- ************************************************
> --- *** relation: fusion_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is a fusion.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW fusion_gene AS
>   SELECT
>     feature_id AS fusion_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'fusion_gene';
> 
> --- ************************************************
> --- *** relation: engineered_fusion_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A fusion gene that is engineered.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_fusion_gene AS
>   SELECT
>     feature_id AS engineered_fusion_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_fusion_gene';
> 
> --- ************************************************
> --- *** relation: microsatellite ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A repeat_region containing repeat_units  ***
> --- *** (2 to 4 bp) that is repeated multiple ti ***
> --- *** mes in tandem.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW microsatellite AS
>   SELECT
>     feature_id AS microsatellite_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'trinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'tetranucleotide_repeat_microsatellite_feature' OR cvterm.name = 'microsatellite';
> 
> --- ************************************************
> --- *** relation: dinucleotide_repeat_microsatellite_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW dinucleotide_repeat_microsatellite_feature AS
>   SELECT
>     feature_id AS dinucleotide_repeat_microsatellite_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dinucleotide_repeat_microsatellite_feature';
> 
> --- ************************************************
> --- *** relation: trinuc_repeat_microsat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW trinuc_repeat_microsat AS
>   SELECT
>     feature_id AS trinuc_repeat_microsat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'trinucleotide_repeat_microsatellite_feature';
> 
> --- ************************************************
> --- *** relation: engineered_foreign_repetitive_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A repetitive element that is engineered  ***
> --- *** and foreign.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_foreign_repetitive_element AS
>   SELECT
>     feature_id AS engineered_foreign_repetitive_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_repetitive_element';
> 
> --- ************************************************
> --- *** relation: inverted_repeat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequence is complementarily repeated ***
> --- ***  on the opposite strand. It is a palindr ***
> --- *** ome, and it may, or may not be hyphenate ***
> --- *** d. Examples: GCTGATCAGC, or GCTGA-----TC ***
> --- *** AGC.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW inverted_repeat AS
>   SELECT
>     feature_id AS inverted_repeat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'terminal_inverted_repeat' OR cvterm.name = 'five_prime_terminal_inverted_repeat' OR cvterm.name = 'three_prime_terminal_inverted_repeat' OR cvterm.name = 'inverted_repeat';
> 
> --- ************************************************
> --- *** relation: u12_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A type of spliceosomal intron spliced by ***
> --- ***  the U12 spliceosome, that includes U11, ***
> --- ***  U12, U4atac/U6atac and U5 snRNAs.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW u12_intron AS
>   SELECT
>     feature_id AS u12_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U12_intron';
> 
> --- ************************************************
> --- *** relation: origin_of_replication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The origin of replication; starting site ***
> --- ***  for duplication of a nucleic acid molec ***
> --- *** ule to give two identical copies.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW origin_of_replication AS
>   SELECT
>     feature_id AS origin_of_replication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_loop' OR cvterm.name = 'ARS' OR cvterm.name = 'oriT' OR cvterm.name = 'amplification_origin' OR cvterm.name = 'oriV' OR cvterm.name = 'oriC' OR cvterm.name = 'origin_of_replication';
> 
> --- ************************************************
> --- *** relation: d_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Displacement loop; a region within mitoc ***
> --- *** hondrial DNA in which a short stretch of ***
> --- ***  RNA is paired with one strand of DNA, d ***
> --- *** isplacing the original partner DNA stran ***
> --- *** d in this region; also used to describe  ***
> --- *** the displacement of a region of one stra ***
> --- *** nd of duplex DNA by a single stranded in ***
> --- *** vader in the reaction catalyzed by RecA  ***
> --- *** protein.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_loop AS
>   SELECT
>     feature_id AS d_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_loop';
> 
> --- ************************************************
> --- *** relation: recombination_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW recombination_feature AS
>   SELECT
>     feature_id AS recombination_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recombination_hotspot' OR cvterm.name = 'haplotype_block' OR cvterm.name = 'sequence_rearrangement_feature' OR cvterm.name = 'iDNA' OR cvterm.name = 'specific_recombination_site' OR cvterm.name = 'chromosome_breakage_sequence' OR cvterm.name = 'internal_eliminated_sequence' OR cvterm.name = 'macronucleus_destined_segment' OR cvterm.name = 'recombination_feature_of_rearranged_gene' OR cvterm.name = 'site_specific_recombination_target_region' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_feature' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_spacer' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_signal_feature' OR cvterm.name = 'D_gene' OR cvterm.name = 'V_gene' OR cvterm.name = 'J_gene' OR cvterm.name = 'C_gene' OR cvterm.name = 'D_J_C_cluster' OR cvterm.name = 'J_C_cluster' OR cvterm.name = 'J_cluster' OR cvterm.name = 'V_cluster' OR cvterm.name = 'V_J_cluster' OR cvterm.name = 'V_J_C_cluster' OR cvterm.name = 'C_cluster' OR cvterm.name = 'D_cluster' OR cvterm.name = 'D_J_cluster' OR cvterm.name = 'three_prime_D_spacer' OR cvterm.name = 'five_prime_D_spacer' OR cvterm.name = 'J_spacer' OR cvterm.name = 'V_spacer' OR cvterm.name = 'VD_gene' OR cvterm.name = 'DJ_gene' OR cvterm.name = 'VDJ_gene' OR cvterm.name = 'VJ_gene' OR cvterm.name = 'DJ_J_cluster' OR cvterm.name = 'VDJ_J_C_cluster' OR cvterm.name = 'VDJ_J_cluster' OR cvterm.name = 'VJ_C_cluster' OR cvterm.name = 'VJ_J_C_cluster' OR cvterm.name = 'VJ_J_cluster' OR cvterm.name = 'D_DJ_C_cluster' OR cvterm.name = 'D_DJ_cluster' OR cvterm.name = 'D_DJ_J_C_cluster' OR cvterm.name = 'D_DJ_J_cluster' OR cvterm.name = 'V_DJ_cluster' OR cvterm.name = 'V_DJ_J_cluster' OR cvterm.name = 'V_VDJ_C_cluster' OR cvterm.name = 'V_VDJ_cluster' OR cvterm.name = 'V_VDJ_J_cluster' OR cvterm.name = 'V_VJ_C_cluster' OR cvterm.name = 'V_VJ_cluster' OR cvterm.name = 'V_VJ_J_cluster' OR cvterm.name = 'V_D_DJ_C_cluster' OR cvterm.name = 'V_D_DJ_cluster' OR cvterm.name = 'V_D_DJ_J_C_cluster' OR cvterm.name = 'V_D_DJ_J_cluster' OR cvterm.name = 'V_D_J_C_cluster' OR cvterm.name = 'V_D_J_cluster' OR cvterm.name = 'DJ_C_cluster' OR cvterm.name = 'DJ_J_C_cluster' OR cvterm.name = 'VDJ_C_cluster' OR cvterm.name = 'V_DJ_C_cluster' OR cvterm.name = 'V_DJ_J_C_cluster' OR cvterm.name = 'V_VDJ_J_C_cluster' OR cvterm.name = 'V_VJ_J_C_cluster' OR cvterm.name = 'J_gene_recombination_feature' OR cvterm.name = 'D_gene_recombination_feature' OR cvterm.name = 'V_gene_recombination_feature' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'integration_excision_site' OR cvterm.name = 'resolution_site' OR cvterm.name = 'inversion_site' OR cvterm.name = 'inversion_site_part' OR cvterm.name = 'attI_site' OR cvterm.name = 'attP_site' OR cvterm.name = 'attB_site' OR cvterm.name = 'attL_site' OR cvterm.name = 'attR_site' OR cvterm.name = 'attC_site' OR cvterm.name = 'attCtn_site' OR cvterm.name = 'loxP_site' OR cvterm.name = 'dif_site' OR cvterm.name = 'FRT_site' OR cvterm.name = 'IRLinv_site' OR cvterm.name = 'IRRinv_site' OR cvterm.name = 'recombination_feature';
> 
> --- ************************************************
> --- *** relation: specific_recombination_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW specific_recombination_site AS
>   SELECT
>     feature_id AS specific_recombination_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recombination_feature_of_rearranged_gene' OR cvterm.name = 'site_specific_recombination_target_region' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_feature' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_spacer' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_signal_feature' OR cvterm.name = 'D_gene' OR cvterm.name = 'V_gene' OR cvterm.name = 'J_gene' OR cvterm.name = 'C_gene' OR cvterm.name = 'D_J_C_cluster' OR cvterm.name = 'J_C_cluster' OR cvterm.name = 'J_cluster' OR cvterm.name = 'V_cluster' OR cvterm.name = 'V_J_cluster' OR cvterm.name = 'V_J_C_cluster' OR cvterm.name = 'C_cluster' OR cvterm.name = 'D_cluster' OR cvterm.name = 'D_J_cluster' OR cvterm.name = 'three_prime_D_spacer' OR cvterm.name = 'five_prime_D_spacer' OR cvterm.name = 'J_spacer' OR cvterm.name = 'V_spacer' OR cvterm.name = 'VD_gene' OR cvterm.name = 'DJ_gene' OR cvterm.name = 'VDJ_gene' OR cvterm.name = 'VJ_gene' OR cvterm.name = 'DJ_J_cluster' OR cvterm.name = 'VDJ_J_C_cluster' OR cvterm.name = 'VDJ_J_cluster' OR cvterm.name = 'VJ_C_cluster' OR cvterm.name = 'VJ_J_C_cluster' OR cvterm.name = 'VJ_J_cluster' OR cvterm.name = 'D_DJ_C_cluster' OR cvterm.name = 'D_DJ_cluster' OR cvterm.name = 'D_DJ_J_C_cluster' OR cvterm.name = 'D_DJ_J_cluster' OR cvterm.name = 'V_DJ_cluster' OR cvterm.name = 'V_DJ_J_cluster' OR cvterm.name = 'V_VDJ_C_cluster' OR cvterm.name = 'V_VDJ_cluster' OR cvterm.name = 'V_VDJ_J_cluster' OR cvterm.name = 'V_VJ_C_cluster' OR cvterm.name = 'V_VJ_cluster' OR cvterm.name = 'V_VJ_J_cluster' OR cvterm.name = 'V_D_DJ_C_cluster' OR cvterm.name = 'V_D_DJ_cluster' OR cvterm.name = 'V_D_DJ_J_C_cluster' OR cvterm.name = 'V_D_DJ_J_cluster' OR cvterm.name = 'V_D_J_C_cluster' OR cvterm.name = 'V_D_J_cluster' OR cvterm.name = 'DJ_C_cluster' OR cvterm.name = 'DJ_J_C_cluster' OR cvterm.name = 'VDJ_C_cluster' OR cvterm.name = 'V_DJ_C_cluster' OR cvterm.name = 'V_DJ_J_C_cluster' OR cvterm.name = 'V_VDJ_J_C_cluster' OR cvterm.name = 'V_VJ_J_C_cluster' OR cvterm.name = 'J_gene_recombination_feature' OR cvterm.name = 'D_gene_recombination_feature' OR cvterm.name = 'V_gene_recombination_feature' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'integration_excision_site' OR cvterm.name = 'resolution_site' OR cvterm.name = 'inversion_site' OR cvterm.name = 'inversion_site_part' OR cvterm.name = 'attI_site' OR cvterm.name = 'attP_site' OR cvterm.name = 'attB_site' OR cvterm.name = 'attL_site' OR cvterm.name = 'attR_site' OR cvterm.name = 'attC_site' OR cvterm.name = 'attCtn_site' OR cvterm.name = 'loxP_site' OR cvterm.name = 'dif_site' OR cvterm.name = 'FRT_site' OR cvterm.name = 'IRLinv_site' OR cvterm.name = 'IRRinv_site' OR cvterm.name = 'specific_recombination_site';
> 
> --- ************************************************
> --- *** relation: recombination_feature_of_rearranged_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW recombination_feature_of_rearranged_gene AS
>   SELECT
>     feature_id AS recombination_feature_of_rearranged_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'vertebrate_immune_system_gene_recombination_feature' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_spacer' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_signal_feature' OR cvterm.name = 'D_gene' OR cvterm.name = 'V_gene' OR cvterm.name = 'J_gene' OR cvterm.name = 'C_gene' OR cvterm.name = 'D_J_C_cluster' OR cvterm.name = 'J_C_cluster' OR cvterm.name = 'J_cluster' OR cvterm.name = 'V_cluster' OR cvterm.name = 'V_J_cluster' OR cvterm.name = 'V_J_C_cluster' OR cvterm.name = 'C_cluster' OR cvterm.name = 'D_cluster' OR cvterm.name = 'D_J_cluster' OR cvterm.name = 'three_prime_D_spacer' OR cvterm.name = 'five_prime_D_spacer' OR cvterm.name = 'J_spacer' OR cvterm.name = 'V_spacer' OR cvterm.name = 'VD_gene' OR cvterm.name = 'DJ_gene' OR cvterm.name = 'VDJ_gene' OR cvterm.name = 'VJ_gene' OR cvterm.name = 'DJ_J_cluster' OR cvterm.name = 'VDJ_J_C_cluster' OR cvterm.name = 'VDJ_J_cluster' OR cvterm.name = 'VJ_C_cluster' OR cvterm.name = 'VJ_J_C_cluster' OR cvterm.name = 'VJ_J_cluster' OR cvterm.name = 'D_DJ_C_cluster' OR cvterm.name = 'D_DJ_cluster' OR cvterm.name = 'D_DJ_J_C_cluster' OR cvterm.name = 'D_DJ_J_cluster' OR cvterm.name = 'V_DJ_cluster' OR cvterm.name = 'V_DJ_J_cluster' OR cvterm.name = 'V_VDJ_C_cluster' OR cvterm.name = 'V_VDJ_cluster' OR cvterm.name = 'V_VDJ_J_cluster' OR cvterm.name = 'V_VJ_C_cluster' OR cvterm.name = 'V_VJ_cluster' OR cvterm.name = 'V_VJ_J_cluster' OR cvterm.name = 'V_D_DJ_C_cluster' OR cvterm.name = 'V_D_DJ_cluster' OR cvterm.name = 'V_D_DJ_J_C_cluster' OR cvterm.name = 'V_D_DJ_J_cluster' OR cvterm.name = 'V_D_J_C_cluster' OR cvterm.name = 'V_D_J_cluster' OR cvterm.name = 'DJ_C_cluster' OR cvterm.name = 'DJ_J_C_cluster' OR cvterm.name = 'VDJ_C_cluster' OR cvterm.name = 'V_DJ_C_cluster' OR cvterm.name = 'V_DJ_J_C_cluster' OR cvterm.name = 'V_VDJ_J_C_cluster' OR cvterm.name = 'V_VJ_J_C_cluster' OR cvterm.name = 'J_gene_recombination_feature' OR cvterm.name = 'D_gene_recombination_feature' OR cvterm.name = 'V_gene_recombination_feature' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'recombination_feature_of_rearranged_gene';
> 
> --- ************************************************
> --- *** relation: vertebrate_immune_system_gene_recombination_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW vertebrate_immune_system_gene_recombination_feature AS
>   SELECT
>     feature_id AS vertebrate_immune_system_gene_recombination_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_spacer' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_signal_feature' OR cvterm.name = 'D_gene' OR cvterm.name = 'V_gene' OR cvterm.name = 'J_gene' OR cvterm.name = 'C_gene' OR cvterm.name = 'D_J_C_cluster' OR cvterm.name = 'J_C_cluster' OR cvterm.name = 'J_cluster' OR cvterm.name = 'V_cluster' OR cvterm.name = 'V_J_cluster' OR cvterm.name = 'V_J_C_cluster' OR cvterm.name = 'C_cluster' OR cvterm.name = 'D_cluster' OR cvterm.name = 'D_J_cluster' OR cvterm.name = 'three_prime_D_spacer' OR cvterm.name = 'five_prime_D_spacer' OR cvterm.name = 'J_spacer' OR cvterm.name = 'V_spacer' OR cvterm.name = 'VD_gene' OR cvterm.name = 'DJ_gene' OR cvterm.name = 'VDJ_gene' OR cvterm.name = 'VJ_gene' OR cvterm.name = 'DJ_J_cluster' OR cvterm.name = 'VDJ_J_C_cluster' OR cvterm.name = 'VDJ_J_cluster' OR cvterm.name = 'VJ_C_cluster' OR cvterm.name = 'VJ_J_C_cluster' OR cvterm.name = 'VJ_J_cluster' OR cvterm.name = 'D_DJ_C_cluster' OR cvterm.name = 'D_DJ_cluster' OR cvterm.name = 'D_DJ_J_C_cluster' OR cvterm.name = 'D_DJ_J_cluster' OR cvterm.name = 'V_DJ_cluster' OR cvterm.name = 'V_DJ_J_cluster' OR cvterm.name = 'V_VDJ_C_cluster' OR cvterm.name = 'V_VDJ_cluster' OR cvterm.name = 'V_VDJ_J_cluster' OR cvterm.name = 'V_VJ_C_cluster' OR cvterm.name = 'V_VJ_cluster' OR cvterm.name = 'V_VJ_J_cluster' OR cvterm.name = 'V_D_DJ_C_cluster' OR cvterm.name = 'V_D_DJ_cluster' OR cvterm.name = 'V_D_DJ_J_C_cluster' OR cvterm.name = 'V_D_DJ_J_cluster' OR cvterm.name = 'V_D_J_C_cluster' OR cvterm.name = 'V_D_J_cluster' OR cvterm.name = 'DJ_C_cluster' OR cvterm.name = 'DJ_J_C_cluster' OR cvterm.name = 'VDJ_C_cluster' OR cvterm.name = 'V_DJ_C_cluster' OR cvterm.name = 'V_DJ_J_C_cluster' OR cvterm.name = 'V_VDJ_J_C_cluster' OR cvterm.name = 'V_VJ_J_C_cluster' OR cvterm.name = 'J_gene_recombination_feature' OR cvterm.name = 'D_gene_recombination_feature' OR cvterm.name = 'V_gene_recombination_feature' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_feature';
> 
> --- ************************************************
> --- *** relation: j_gene_recombination_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Recombination signal including J-heptame ***
> --- *** r, J-spacer and J-nonamer in 5' of J-reg ***
> --- *** ion of a J-gene or J-sequence.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW j_gene_recombination_feature AS
>   SELECT
>     feature_id AS j_gene_recombination_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'J_gene_recombination_feature';
> 
> --- ************************************************
> --- *** relation: clip ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Part of the primary transcript that is c ***
> --- *** lipped off during processing.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW clip AS
>   SELECT
>     feature_id AS clip_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_clip' OR cvterm.name = 'three_prime_clip' OR cvterm.name = 'clip';
> 
> --- ************************************************
> --- *** relation: modified_base_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified nucleotide, i.e. a nucleotide ***
> --- ***  other than A, T, C. G or (in RNA) U.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_base_site AS
>   SELECT
>     feature_id AS modified_base_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylated_base_feature' OR cvterm.name = 'methylated_C' OR cvterm.name = 'methylated_A' OR cvterm.name = 'modified_base_site';
> 
> --- ************************************************
> --- *** relation: methylated_base_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A nucleotide modified by methylation.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW methylated_base_feature AS
>   SELECT
>     feature_id AS methylated_base_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylated_C' OR cvterm.name = 'methylated_A' OR cvterm.name = 'methylated_base_feature';
> 
> --- ************************************************
> --- *** relation: cpg_island ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Regions of a few hundred to a few thousa ***
> --- *** nd bases in vertebrate genomes that are  ***
> --- *** relatively GC and CpG rich; they are typ ***
> --- *** ically unmethylated and often found near ***
> --- ***  the 5' ends of genes.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW cpg_island AS
>   SELECT
>     feature_id AS cpg_island_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CpG_island';
> 
> --- ************************************************
> --- *** relation: experimentally_determined ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Attribute to describe a feature that has ***
> --- ***  been experiemntally verified.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW experimentally_determined AS
>   SELECT
>     feature_id AS experimentally_determined_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'experimentally_determined';
> 
> --- ************************************************
> --- *** relation: stem_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A double-helical region of nucleic acid  ***
> --- *** formed by base-pairing between adjacent  ***
> --- *** (inverted) complementary sequences.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW stem_loop AS
>   SELECT
>     feature_id AS stem_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tetraloop' OR cvterm.name = 'stem_loop';
> 
> --- ************************************************
> --- *** relation: direct_repeat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A repeat where the same sequence is repe ***
> --- *** ated in the same direction. Example: GCT ***
> --- *** GA-----GCTGA.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW direct_repeat AS
>   SELECT
>     feature_id AS direct_repeat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'target_site_duplication' OR cvterm.name = 'CRISPR' OR cvterm.name = 'direct_repeat';
> 
> --- ************************************************
> --- *** relation: tss ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The first base where RNA polymerase begi ***
> --- *** ns to synthesize the RNA transcript.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW tss AS
>   SELECT
>     feature_id AS tss_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'major_TSS' OR cvterm.name = 'minor_TSS' OR cvterm.name = 'TSS';
> 
> --- ************************************************
> --- *** relation: cds ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A contiguous sequence which begins with, ***
> --- ***  and includes, a start codon and ends wi ***
> --- *** th, and includes, a stop codon.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW cds AS
>   SELECT
>     feature_id AS cds_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'edited_CDS' OR cvterm.name = 'CDS_fragment' OR cvterm.name = 'CDS_independently_known' OR cvterm.name = 'CDS_predicted' OR cvterm.name = 'orphan_CDS' OR cvterm.name = 'CDS_supported_by_sequence_similarity_data' OR cvterm.name = 'CDS_supported_by_domain_match_data' OR cvterm.name = 'CDS_supported_by_EST_or_cDNA_data' OR cvterm.name = 'CDS';
> 
> --- ************************************************
> --- *** relation: cdna_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Complementary DNA; A piece of DNA copied ***
> --- ***  from an mRNA and spliced into a vector  ***
> --- *** for propagation in a suitable host.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW cdna_clone AS
>   SELECT
>     feature_id AS cdna_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'validated_cDNA_clone' OR cvterm.name = 'invalidated_cDNA_clone' OR cvterm.name = 'three_prime_RACE_clone' OR cvterm.name = 'chimeric_cDNA_clone' OR cvterm.name = 'genomically_contaminated_cDNA_clone' OR cvterm.name = 'polyA_primed_cDNA_clone' OR cvterm.name = 'partially_processed_cDNA_clone' OR cvterm.name = 'cDNA_clone';
> 
> --- ************************************************
> --- *** relation: start_codon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** First codon to be translated by a riboso ***
> --- *** me.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW start_codon AS
>   SELECT
>     feature_id AS start_codon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_canonical_start_codon' OR cvterm.name = 'four_bp_start_codon' OR cvterm.name = 'CTG_start_codon' OR cvterm.name = 'start_codon';
> 
> --- ************************************************
> --- *** relation: stop_codon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** In mRNA, a set of three nucleotides that ***
> --- ***  indicates the end of information for pr ***
> --- *** otein synthesis.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW stop_codon AS
>   SELECT
>     feature_id AS stop_codon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stop_codon';
> 
> --- ************************************************
> --- *** relation: intronic_splice_enhancer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Sequences within the intron that modulat ***
> --- *** e splice site selection for some introns ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW intronic_splice_enhancer AS
>   SELECT
>     feature_id AS intronic_splice_enhancer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intronic_splice_enhancer';
> 
> --- ************************************************
> --- *** relation: mrna_with_plus_1_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA with a plus 1 frameshift.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna_with_plus_1_frameshift AS
>   SELECT
>     feature_id AS mrna_with_plus_1_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_with_plus_1_frameshift';
> 
> --- ************************************************
> --- *** relation: nuclease_hypersensitive_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW nuclease_hypersensitive_site AS
>   SELECT
>     feature_id AS nuclease_hypersensitive_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DNAseI_hypersensitive_site' OR cvterm.name = 'nuclease_hypersensitive_site';
> 
> --- ************************************************
> --- *** relation: coding_start ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The first base to be translated into pro ***
> --- *** tein.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW coding_start AS
>   SELECT
>     feature_id AS coding_start_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'coding_start';
> 
> --- ************************************************
> --- *** relation: tag ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A nucleotide sequence that may be used t ***
> --- *** o identify a larger sequence.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW tag AS
>   SELECT
>     feature_id AS tag_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SAGE_tag' OR cvterm.name = 'STS' OR cvterm.name = 'EST' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'five_prime_EST' OR cvterm.name = 'three_prime_EST' OR cvterm.name = 'UST' OR cvterm.name = 'RST' OR cvterm.name = 'three_prime_UST' OR cvterm.name = 'five_prime_UST' OR cvterm.name = 'three_prime_RST' OR cvterm.name = 'five_prime_RST' OR cvterm.name = 'tag';
> 
> --- ************************************************
> --- *** relation: rrna_large_subunit_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a large ri ***
> --- *** bosomal subunit RNA.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_large_subunit_primary_transcript AS
>   SELECT
>     feature_id AS rrna_large_subunit_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_large_subunit_primary_transcript';
> 
> --- ************************************************
> --- *** relation: sage_tag ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A short diagnostic sequence tag, serial  ***
> --- *** analysis of gene expression (SAGE), that ***
> --- ***  allows the quantitative and simultaneou ***
> --- *** s analysis of a large number of transcri ***
> --- *** pts.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW sage_tag AS
>   SELECT
>     feature_id AS sage_tag_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SAGE_tag';
> 
> --- ************************************************
> --- *** relation: coding_end ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The last base to be translated into prot ***
> --- *** ein. It does not include the stop codon. ***
> --- ************************************************
> ---
> 
> CREATE VIEW coding_end AS
>   SELECT
>     feature_id AS coding_end_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'coding_end';
> 
> --- ************************************************
> --- *** relation: microarray_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW microarray_oligo AS
>   SELECT
>     feature_id AS microarray_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'microarray_oligo';
> 
> --- ************************************************
> --- *** relation: mrna_with_plus_2_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA with a plus 2 frameshift.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna_with_plus_2_frameshift AS
>   SELECT
>     feature_id AS mrna_with_plus_2_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_with_plus_2_frameshift';
> 
> --- ************************************************
> --- *** relation: conserved_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Region of sequence similarity by descent ***
> --- ***  from a common ancestor.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW conserved_region AS
>   SELECT
>     feature_id AS conserved_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'coding_conserved_region' OR cvterm.name = 'nc_conserved_region' OR cvterm.name = 'homologous_region' OR cvterm.name = 'syntenic_region' OR cvterm.name = 'paralogous_region' OR cvterm.name = 'orthologous_region' OR cvterm.name = 'conserved_region';
> 
> --- ************************************************
> --- *** relation: sts ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Short (typically a few hundred base pair ***
> --- *** s) DNA sequence that has a single occurr ***
> --- *** ence in a genome and whose location and  ***
> --- *** base sequence are known.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW sts AS
>   SELECT
>     feature_id AS sts_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'STS';
> 
> --- ************************************************
> --- *** relation: coding_conserved_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Coding region of sequence similarity by  ***
> --- *** descent from a common ancestor.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW coding_conserved_region AS
>   SELECT
>     feature_id AS coding_conserved_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'coding_conserved_region';
> 
> --- ************************************************
> --- *** relation: exon_junction ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The boundary between two exons in a proc ***
> --- *** essed transcript.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW exon_junction AS
>   SELECT
>     feature_id AS exon_junction_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'exon_junction';
> 
> --- ************************************************
> --- *** relation: nc_conserved_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Non-coding region of sequence similarity ***
> --- ***  by descent from a common ancestor.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW nc_conserved_region AS
>   SELECT
>     feature_id AS nc_conserved_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nc_conserved_region';
> 
> --- ************************************************
> --- *** relation: mrna_with_minus_2_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mRNA with a minus 2 frameshift.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna_with_minus_2_frameshift AS
>   SELECT
>     feature_id AS mrna_with_minus_2_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_with_minus_2_frameshift';
> 
> --- ************************************************
> --- *** relation: pseudogene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence that closely resembles a know ***
> --- *** n functional gene, at another locus with ***
> --- *** in a genome, that is non-functional as a ***
> --- ***  consequence of (usually several) mutati ***
> --- *** ons that prevent either its transcriptio ***
> --- *** n or translation (or both). In general,  ***
> --- *** pseudogenes result from either reverse t ***
> --- *** ranscription of a transcript of their "n ***
> --- *** ormal" paralog (SO:0000043) (in which ca ***
> --- *** se the pseudogene typically lacks intron ***
> --- *** s and includes a poly(A) tail) or from r ***
> --- *** ecombination (SO:0000044) (in which case ***
> --- ***  the pseudogene is typically a tandem du ***
> --- *** plication of its "normal" paralog).      ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudogene AS
>   SELECT
>     feature_id AS pseudogene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'processed_pseudogene' OR cvterm.name = 'pseudogene_by_unequal_crossing_over' OR cvterm.name = 'nuclear_mt_pseudogene' OR cvterm.name = 'cassette_pseudogene' OR cvterm.name = 'pseudogene';
> 
> --- ************************************************
> --- *** relation: rnai_reagent ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A double stranded RNA duplex, at least 2 ***
> --- *** 0bp long, used experimentally to inhibit ***
> --- ***  gene function by RNA interference.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW rnai_reagent AS
>   SELECT
>     feature_id AS rnai_reagent_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNAi_reagent';
> 
> --- ************************************************
> --- *** relation: mite ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A highly repetitive and short (100-500 b ***
> --- *** ase pair) transposable element with term ***
> --- *** inal inverted repeats (TIR) and target s ***
> --- *** ite duplication (TSD). MITEs do not enco ***
> --- *** de proteins.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW mite AS
>   SELECT
>     feature_id AS mite_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'MITE';
> 
> --- ************************************************
> --- *** relation: recombination_hotspot ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region in a genome which promotes reco ***
> --- *** mbination.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW recombination_hotspot AS
>   SELECT
>     feature_id AS recombination_hotspot_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recombination_hotspot';
> 
> --- ************************************************
> --- *** relation: chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a nucleic ac ***
> --- *** id molecule which controls its own repli ***
> --- *** cation through the interaction of specif ***
> --- *** ic proteins at one or more origins of re ***
> --- *** plication.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome AS
>   SELECT
>     feature_id AS chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mitochondrial_chromosome' OR cvterm.name = 'chloroplast_chromosome' OR cvterm.name = 'chromoplast_chromosome' OR cvterm.name = 'cyanelle_chromosome' OR cvterm.name = 'leucoplast_chromosome' OR cvterm.name = 'macronuclear_chromosome' OR cvterm.name = 'micronuclear_chromosome' OR cvterm.name = 'nuclear_chromosome' OR cvterm.name = 'nucleomorphic_chromosome' OR cvterm.name = 'DNA_chromosome' OR cvterm.name = 'RNA_chromosome' OR cvterm.name = 'apicoplast_chromosome' OR cvterm.name = 'double_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_DNA_chromosome' OR cvterm.name = 'linear_double_stranded_DNA_chromosome' OR cvterm.name = 'circular_double_stranded_DNA_chromosome' OR cvterm.name = 'linear_single_stranded_DNA_chromosome' OR cvterm.name = 'circular_single_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_RNA_chromosome' OR cvterm.name = 'double_stranded_RNA_chromosome' OR cvterm.name = 'linear_single_stranded_RNA_chromosome' OR cvterm.name = 'circular_single_stranded_RNA_chromosome' OR cvterm.name = 'linear_double_stranded_RNA_chromosome' OR cvterm.name = 'circular_double_stranded_RNA_chromosome' OR cvterm.name = 'chromosome';
> 
> --- ************************************************
> --- *** relation: chromosome_band ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cytologically distinguishable feature  ***
> --- *** of a chromosome, often made visible by s ***
> --- *** taining, and usually alternating light a ***
> --- *** nd dark.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome_band AS
>   SELECT
>     feature_id AS chromosome_band_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromosome_band';
> 
> --- ************************************************
> --- *** relation: site_specific_recombination_target_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW site_specific_recombination_target_region AS
>   SELECT
>     feature_id AS site_specific_recombination_target_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'integration_excision_site' OR cvterm.name = 'resolution_site' OR cvterm.name = 'inversion_site' OR cvterm.name = 'inversion_site_part' OR cvterm.name = 'attI_site' OR cvterm.name = 'attP_site' OR cvterm.name = 'attB_site' OR cvterm.name = 'attL_site' OR cvterm.name = 'attR_site' OR cvterm.name = 'attC_site' OR cvterm.name = 'attCtn_site' OR cvterm.name = 'loxP_site' OR cvterm.name = 'dif_site' OR cvterm.name = 'FRT_site' OR cvterm.name = 'IRLinv_site' OR cvterm.name = 'IRRinv_site' OR cvterm.name = 'site_specific_recombination_target_region';
> 
> --- ************************************************
> --- *** relation: match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of sequence, aligned to another ***
> --- ***  sequence with some statistical signific ***
> --- *** ance, using an algorithm such as BLAST o ***
> --- *** r SIM4.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW match AS
>   SELECT
>     feature_id AS match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nucleotide_match' OR cvterm.name = 'protein_match' OR cvterm.name = 'expressed_sequence_match' OR cvterm.name = 'cross_genome_match' OR cvterm.name = 'translated_nucleotide_match' OR cvterm.name = 'primer_match' OR cvterm.name = 'EST_match' OR cvterm.name = 'cDNA_match' OR cvterm.name = 'UST_match' OR cvterm.name = 'RST_match' OR cvterm.name = 'match';
> 
> --- ************************************************
> --- *** relation: splice_enhancer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Region of a transcript that regulates sp ***
> --- *** licing.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW splice_enhancer AS
>   SELECT
>     feature_id AS splice_enhancer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'exonic_splice_enhancer' OR cvterm.name = 'splice_enhancer';
> 
> --- ************************************************
> --- *** relation: est ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tag produced from a single sequencing  ***
> --- *** read from a cDNA clone or PCR product; t ***
> --- *** ypically a few hundred base pairs long.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW est AS
>   SELECT
>     feature_id AS est_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_EST' OR cvterm.name = 'three_prime_EST' OR cvterm.name = 'UST' OR cvterm.name = 'RST' OR cvterm.name = 'three_prime_UST' OR cvterm.name = 'five_prime_UST' OR cvterm.name = 'three_prime_RST' OR cvterm.name = 'five_prime_RST' OR cvterm.name = 'EST';
> 
> --- ************************************************
> --- *** relation: loxp_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW loxp_site AS
>   SELECT
>     feature_id AS loxp_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'loxP_site';
> 
> --- ************************************************
> --- *** relation: nucleotide_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A match against a nucleotide sequence.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW nucleotide_match AS
>   SELECT
>     feature_id AS nucleotide_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'expressed_sequence_match' OR cvterm.name = 'cross_genome_match' OR cvterm.name = 'translated_nucleotide_match' OR cvterm.name = 'primer_match' OR cvterm.name = 'EST_match' OR cvterm.name = 'cDNA_match' OR cvterm.name = 'UST_match' OR cvterm.name = 'RST_match' OR cvterm.name = 'nucleotide_match';
> 
> --- ************************************************
> --- *** relation: nucleic_acid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence consi ***
> --- *** sting of nucleobases bound to repeating  ***
> --- *** units. The forms found in nature are deo ***
> --- *** xyribonucleic acid (DNA), where the repe ***
> --- *** ating units are 2-deoxy-D-ribose rings c ***
> --- *** onnected to a phosphate backbone, and ri ***
> --- *** bonucleic acid (RNA), where the repeatin ***
> --- *** g units are D-ribose rings connected to  ***
> --- *** a phosphate backbone.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW nucleic_acid AS
>   SELECT
>     feature_id AS nucleic_acid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DNA' OR cvterm.name = 'RNA' OR cvterm.name = 'morpholino' OR cvterm.name = 'PNA' OR cvterm.name = 'LNA' OR cvterm.name = 'TNA' OR cvterm.name = 'GNA' OR cvterm.name = 'cDNA' OR cvterm.name = 'genomic_DNA' OR cvterm.name = 'single_stranded_cDNA' OR cvterm.name = 'double_stranded_cDNA' OR cvterm.name = 'R_GNA' OR cvterm.name = 'S_GNA' OR cvterm.name = 'nucleic_acid';
> 
> --- ************************************************
> --- *** relation: protein_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A match against a protein sequence.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW protein_match AS
>   SELECT
>     feature_id AS protein_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'protein_match';
> 
> --- ************************************************
> --- *** relation: frt_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An inversion site found on the Saccharom ***
> --- *** yces cerevisiae 2 micron plasmid.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW frt_site AS
>   SELECT
>     feature_id AS frt_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'FRT_site';
> 
> --- ************************************************
> --- *** relation: synthetic_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to decide a sequence of nuc ***
> --- *** leotides, nucleotide analogs, or amino a ***
> --- *** cids that has been designed by an experi ***
> --- *** menter and which may, or may not, corres ***
> --- *** pond with any natural sequence.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW synthetic_sequence AS
>   SELECT
>     feature_id AS synthetic_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'random_sequence' OR cvterm.name = 'designed_sequence' OR cvterm.name = 'synthetic_sequence';
> 
> --- ************************************************
> --- *** relation: dna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence consi ***
> --- *** sting of nucleobases bound to a repeatin ***
> --- *** g unit made of a 2-deoxy-D-ribose ring c ***
> --- *** onnected to a phosphate backbone.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW dna AS
>   SELECT
>     feature_id AS dna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cDNA' OR cvterm.name = 'genomic_DNA' OR cvterm.name = 'single_stranded_cDNA' OR cvterm.name = 'double_stranded_cDNA' OR cvterm.name = 'DNA';
> 
> --- ************************************************
> --- *** relation: sequence_assembly ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence of nucleotides that has been  ***
> --- *** algorithmically derived from an alignmen ***
> --- *** t of two or more different sequences.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_assembly AS
>   SELECT
>     feature_id AS sequence_assembly_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'supercontig' OR cvterm.name = 'contig' OR cvterm.name = 'tiling_path' OR cvterm.name = 'virtual_sequence' OR cvterm.name = 'golden_path' OR cvterm.name = 'ultracontig' OR cvterm.name = 'expressed_sequence_assembly' OR cvterm.name = 'sequence_assembly';
> 
> --- ************************************************
> --- *** relation: group_1_intron_homing_endonuclease_target_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW group_1_intron_homing_endonuclease_target_region AS
>   SELECT
>     feature_id AS group_1_intron_homing_endonuclease_target_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'group_1_intron_homing_endonuclease_target_region';
> 
> --- ************************************************
> --- *** relation: haplotype_block ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of the genome which is co-inher ***
> --- *** ited as the result of the lack of histor ***
> --- *** ic recombination within it.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW haplotype_block AS
>   SELECT
>     feature_id AS haplotype_block_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'haplotype_block';
> 
> --- ************************************************
> --- *** relation: rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence consi ***
> --- *** sting of nucleobases bound to a repeatin ***
> --- *** g unit made of a D-ribose ring connected ***
> --- ***  to a phosphate backbone.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna AS
>   SELECT
>     feature_id AS rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNA';
> 
> --- ************************************************
> --- *** relation: flanked ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a region that is ***
> --- ***  bounded either side by a paricular kind ***
> --- ***  of region.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW flanked AS
>   SELECT
>     feature_id AS flanked_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'floxed' OR cvterm.name = 'FRT_flanked' OR cvterm.name = 'flanked';
> 
> --- ************************************************
> --- *** relation: floxed ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing sequence that is ***
> --- ***  flanked by Lox-P sites.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW floxed AS
>   SELECT
>     feature_id AS floxed_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'floxed';
> 
> --- ************************************************
> --- *** relation: codon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A set of (usually) three nucleotide base ***
> --- *** s in a DNA or RNA sequence, which togeth ***
> --- *** er code for a unique amino acid or the t ***
> --- *** ermination of translation and are contai ***
> --- *** ned within the CDS.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW codon AS
>   SELECT
>     feature_id AS codon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recoded_codon' OR cvterm.name = 'start_codon' OR cvterm.name = 'stop_codon' OR cvterm.name = 'stop_codon_read_through' OR cvterm.name = 'stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'non_canonical_start_codon' OR cvterm.name = 'four_bp_start_codon' OR cvterm.name = 'CTG_start_codon' OR cvterm.name = 'codon';
> 
> --- ************************************************
> --- *** relation: frt_flanked ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe sequence that i ***
> --- *** s flanked by the FLP recombinase recogni ***
> --- *** tion site, FRT.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW frt_flanked AS
>   SELECT
>     feature_id AS frt_flanked_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'FRT_flanked';
> 
> --- ************************************************
> --- *** relation: invalidated_by_chimeric_cdna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cDNA clone constructed from more than  ***
> --- *** one mRNA. Usually an experimental artifa ***
> --- *** ct.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW invalidated_by_chimeric_cdna AS
>   SELECT
>     feature_id AS invalidated_by_chimeric_cdna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'invalidated_by_chimeric_cDNA';
> 
> --- ************************************************
> --- *** relation: floxed_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transgene that is floxed.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW floxed_gene AS
>   SELECT
>     feature_id AS floxed_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'floxed_gene';
> 
> --- ************************************************
> --- *** relation: transposable_element_flanking_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of sequence surrounding a tra ***
> --- *** nsposible element.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW transposable_element_flanking_region AS
>   SELECT
>     feature_id AS transposable_element_flanking_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transposable_element_flanking_region';
> 
> --- ************************************************
> --- *** relation: integron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region encoding an integrase which act ***
> --- *** s at a site adjacent to it (attI_site) t ***
> --- *** o insert DNA which must include but is n ***
> --- *** ot limited to an attC_site.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW integron AS
>   SELECT
>     feature_id AS integron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'integron';
> 
> --- ************************************************
> --- *** relation: insertion_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The junction where an insertion occurred ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW insertion_site AS
>   SELECT
>     feature_id AS insertion_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transposable_element_insertion_site' OR cvterm.name = 'insertion_site';
> 
> --- ************************************************
> --- *** relation: atti_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region within an integron, adjacent to ***
> --- ***  an integrase, at which site specific re ***
> --- *** combination involving an attC_site takes ***
> --- ***  place.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW atti_site AS
>   SELECT
>     feature_id AS atti_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attI_site';
> 
> --- ************************************************
> --- *** relation: transposable_element_insertion_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The junction in a genome where a transpo ***
> --- *** sable_element has inserted.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW transposable_element_insertion_site AS
>   SELECT
>     feature_id AS transposable_element_insertion_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transposable_element_insertion_site';
> 
> --- ************************************************
> --- *** relation: small_regulatory_ncrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non-coding RNA, usually with a specifi ***
> --- *** c secondary structure, that acts to regu ***
> --- *** late gene expression.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW small_regulatory_ncrna AS
>   SELECT
>     feature_id AS small_regulatory_ncrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'miRNA' OR cvterm.name = 'RNA_6S' OR cvterm.name = 'CsrB_RsmB_RNA' OR cvterm.name = 'DsrA_RNA' OR cvterm.name = 'OxyS_RNA' OR cvterm.name = 'RprA_RNA' OR cvterm.name = 'RRE_RNA' OR cvterm.name = 'spot_42_RNA' OR cvterm.name = 'tmRNA' OR cvterm.name = 'GcvB_RNA' OR cvterm.name = 'small_regulatory_ncRNA';
> 
> --- ************************************************
> --- *** relation: conjugative_transposon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transposon that encodes function requi ***
> --- *** red for conjugation.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW conjugative_transposon AS
>   SELECT
>     feature_id AS conjugative_transposon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'conjugative_transposon';
> 
> --- ************************************************
> --- *** relation: enzymatic_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An RNA sequence that has catalytic activ ***
> --- *** ity with or without an associated ribonu ***
> --- *** cleoprotein.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW enzymatic_rna AS
>   SELECT
>     feature_id AS enzymatic_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ribozyme' OR cvterm.name = 'enzymatic_RNA';
> 
> --- ************************************************
> --- *** relation: recombinationally_inverted_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recombinationally rearranged gene by i ***
> --- *** nversion.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW recombinationally_inverted_gene AS
>   SELECT
>     feature_id AS recombinationally_inverted_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recombinationally_inverted_gene';
> 
> --- ************************************************
> --- *** relation: ribozyme ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An RNA with catalytic activity.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW ribozyme AS
>   SELECT
>     feature_id AS ribozyme_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ribozyme';
> 
> --- ************************************************
> --- *** relation: rrna_5_8s ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_8S ribosomal RNA (5. 8S rRNA) is a com ***
> --- *** ponent of the large subunit of the eukar ***
> --- *** yotic ribosome. It is transcribed by RNA ***
> --- ***  polymerase I as part of the 45S precurs ***
> --- *** or that also contains 18S and 28S rRNA.  ***
> --- *** Functionally, it is thought that 5.8S rR ***
> --- *** NA may be involved in ribosome transloca ***
> --- *** tion. It is also known to form covalent  ***
> --- *** linkage to the p53 tumour suppressor pro ***
> --- *** tein. 5_8S rRNA is also found in archaea ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_5_8s AS
>   SELECT
>     feature_id AS rrna_5_8s_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_5_8S';
> 
> --- ************************************************
> --- *** relation: rna_6s ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A small (184-nt in E. coli) RNA that for ***
> --- *** ms a hairpin type structure. 6S RNA asso ***
> --- *** ciates with RNA polymerase in a highly s ***
> --- *** pecific manner. 6S RNA represses express ***
> --- *** ion from a sigma70-dependent promoter du ***
> --- *** ring stationary phase.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna_6s AS
>   SELECT
>     feature_id AS rna_6s_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNA_6S';
> 
> --- ************************************************
> --- *** relation: csrb_rsmb_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An enterobacterial RNA that binds the Cs ***
> --- *** rA protein. The CsrB RNAs contain a cons ***
> --- *** erved motif CAGGXXG that is found in up  ***
> --- *** to 18 copies and has been suggested to b ***
> --- *** ind CsrA. The Csr regulatory system has  ***
> --- *** a strong negative regulatory effect on g ***
> --- *** lycogen biosynthesis, glyconeogenesis an ***
> --- *** d glycogen catabolism and a positive reg ***
> --- *** ulatory effect on glycolysis. In other b ***
> --- *** acteria such as Erwinia caratovara the R ***
> --- *** smA protein has been shown to regulate t ***
> --- *** he production of virulence determinants, ***
> --- ***  such extracellular enzymes. RsmA binds  ***
> --- *** to RsmB regulatory RNA which is also a m ***
> --- *** ember of this family.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW csrb_rsmb_rna AS
>   SELECT
>     feature_id AS csrb_rsmb_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CsrB_RsmB_RNA';
> 
> --- ************************************************
> --- *** relation: dsra_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** DsrA RNA regulates both transcription, b ***
> --- *** y overcoming transcriptional silencing b ***
> --- *** y the nucleoid-associated H-NS protein,  ***
> --- *** and translation, by promoting efficient  ***
> --- *** translation of the stress sigma factor,  ***
> --- *** RpoS. These two activities of DsrA can b ***
> --- *** e separated by mutation: the first of th ***
> --- *** ree stem-loops of the 85 nucleotide RNA  ***
> --- *** is necessary for RpoS translation but no ***
> --- *** t for anti-H-NS action, while the second ***
> --- ***  stem-loop is essential for antisilencin ***
> --- *** g and less critical for RpoS translation ***
> --- *** . The third stem-loop, which behaves as  ***
> --- *** a transcription terminator, can be subst ***
> --- *** ituted by the trp transcription terminat ***
> --- *** or without loss of either DsrA function. ***
> --- ***  The sequence of the first stem-loop of  ***
> --- *** DsrA is complementary with the upstream  ***
> --- *** leader portion of RpoS messenger RNA, su ***
> --- *** ggesting that pairing of DsrA with the R ***
> --- *** poS message might be important for trans ***
> --- *** lational regulation.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW dsra_rna AS
>   SELECT
>     feature_id AS dsra_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'GcvB_RNA' OR cvterm.name = 'DsrA_RNA';
> 
> --- ************************************************
> --- *** relation: gcvb_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A small untranslated RNA involved in exp ***
> --- *** ression of the dipeptide and oligopeptid ***
> --- *** e transport systems in Escherichia coli. ***
> --- ************************************************
> ---
> 
> CREATE VIEW gcvb_rna AS
>   SELECT
>     feature_id AS gcvb_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'GcvB_RNA';
> 
> --- ************************************************
> --- *** relation: hammerhead_ribozyme ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A small catalytic RNA motif that catalyz ***
> --- *** es self-cleavage reaction. Its name come ***
> --- *** s from its secondary structure which res ***
> --- *** embles a carpenter's hammer. The hammerh ***
> --- *** ead ribozyme is involved in the replicat ***
> --- *** ion of some viroid and some satellite RN ***
> --- *** As.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW hammerhead_ribozyme AS
>   SELECT
>     feature_id AS hammerhead_ribozyme_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'hammerhead_ribozyme';
> 
> --- ************************************************
> --- *** relation: group_iia_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW group_iia_intron AS
>   SELECT
>     feature_id AS group_iia_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'group_IIA_intron';
> 
> --- ************************************************
> --- *** relation: group_iib_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW group_iib_intron AS
>   SELECT
>     feature_id AS group_iib_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'group_IIB_intron';
> 
> --- ************************************************
> --- *** relation: micf_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non-translated 93 nt antisense RNA tha ***
> --- *** t binds its target ompF mRNA and regulat ***
> --- *** es ompF expression by inhibiting transla ***
> --- *** tion and inducing degradation of the mes ***
> --- *** sage.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW micf_rna AS
>   SELECT
>     feature_id AS micf_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'MicF_RNA';
> 
> --- ************************************************
> --- *** relation: oxys_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A small untranslated RNA which is induce ***
> --- *** d in response to oxidative stress in Esc ***
> --- *** herichia coli. Acts as a global regulato ***
> --- *** r to activate or repress the expression  ***
> --- *** of as many as 40 genes, including the fh ***
> --- *** lA-encoded transcriptional activator and ***
> --- ***  the rpoS-encoded sigma(s) subunit of RN ***
> --- *** A polymerase. OxyS is bound by the Hfq p ***
> --- *** rotein, that increases the OxyS RNA inte ***
> --- *** raction with its target messages.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW oxys_rna AS
>   SELECT
>     feature_id AS oxys_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'OxyS_RNA';
> 
> --- ************************************************
> --- *** relation: rnase_mrp_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The RNA molecule essential for the catal ***
> --- *** ytic activity of RNase MRP, an enzymatic ***
> --- *** ally active ribonucleoprotein with two d ***
> --- *** istinct roles in eukaryotes. In mitochon ***
> --- *** dria it plays a direct role in the initi ***
> --- *** ation of mitochondrial DNA replication.  ***
> --- *** In the nucleus it is involved in precurs ***
> --- *** or rRNA processing, where it cleaves the ***
> --- ***  internal transcribed spacer 1 between 1 ***
> --- *** 8S and 5.8S rRNAs.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW rnase_mrp_rna AS
>   SELECT
>     feature_id AS rnase_mrp_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNase_MRP_RNA';
> 
> --- ************************************************
> --- *** relation: rnase_p_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The RNA component of Ribonuclease P (RNa ***
> --- *** se P), a ubiquitous endoribonuclease, fo ***
> --- *** und in archaea, bacteria and eukarya as  ***
> --- *** well as chloroplasts and mitochondria. I ***
> --- *** ts best characterised activity is the ge ***
> --- *** neration of mature 5 prime ends of tRNAs ***
> --- ***  by cleaving the 5 prime leader elements ***
> --- ***  of precursor-tRNAs. Cellular RNase Ps a ***
> --- *** re ribonucleoproteins. RNA from bacteria ***
> --- *** l RNase Ps retains its catalytic activit ***
> --- *** y in the absence of the protein subunit, ***
> --- ***  i.e. it is a ribozyme. Isolated eukaryo ***
> --- *** tic and archaeal RNase P RNA has not bee ***
> --- *** n shown to retain its catalytic function ***
> --- *** , but is still essential for the catalyt ***
> --- *** ic activity of the holoenzyme. Although  ***
> --- *** the archaeal and eukaryotic holoenzymes  ***
> --- *** have a much greater protein content than ***
> --- ***  the bacterial ones, the RNA cores from  ***
> --- *** all the three lineages are homologous. H ***
> --- *** elices corresponding to P1, P2, P3, P4,  ***
> --- *** and P10/11 are common to all cellular RN ***
> --- *** ase P RNAs. Yet, there is considerable s ***
> --- *** equence variation, particularly among th ***
> --- *** e eukaryotic RNAs.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW rnase_p_rna AS
>   SELECT
>     feature_id AS rnase_p_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNase_P_RNA';
> 
> --- ************************************************
> --- *** relation: rpra_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Translational regulation of the stationa ***
> --- *** ry phase sigma factor RpoS is mediated b ***
> --- *** y the formation of a double-stranded RNA ***
> --- ***  stem-loop structure in the upstream reg ***
> --- *** ion of the rpoS messenger RNA, occluding ***
> --- ***  the translation initiation site. Clones ***
> --- ***  carrying rprA (RpoS regulator RNA) incr ***
> --- *** eased the translation of RpoS. The rprA  ***
> --- *** gene encodes a 106 nucleotide regulatory ***
> --- ***  RNA. As with DsrA Rfam:RF00014, RprA is ***
> --- ***  predicted to form three stem-loops. Thu ***
> --- *** s, at least two small RNAs, DsrA and Rpr ***
> --- *** A, participate in the positive regulatio ***
> --- *** n of RpoS translation. Unlike DsrA, RprA ***
> --- ***  does not have an extensive region of co ***
> --- *** mplementarity to the RpoS leader, leavin ***
> --- *** g its mechanism of action unclear. RprA  ***
> --- *** is non-essential.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW rpra_rna AS
>   SELECT
>     feature_id AS rpra_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RprA_RNA';
> 
> --- ************************************************
> --- *** relation: rre_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The Rev response element (RRE) is encode ***
> --- *** d within the HIV-env gene. Rev is an ess ***
> --- *** ential regulatory protein of HIV that bi ***
> --- *** nds an internal loop of the RRE leading, ***
> --- ***  encouraging further Rev-RRE binding. Th ***
> --- *** is RNP complex is critical for mRNA expo ***
> --- *** rt and hence for expression of the HIV s ***
> --- *** tructural proteins.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW rre_rna AS
>   SELECT
>     feature_id AS rre_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RRE_RNA';
> 
> --- ************************************************
> --- *** relation: spot_42_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A 109-nucleotide RNA of E. coli that see ***
> --- *** ms to have a regulatory role on the gala ***
> --- *** ctose operon. Changes in Spot 42 levels  ***
> --- *** are implicated in affecting DNA polymera ***
> --- *** se I levels.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW spot_42_rna AS
>   SELECT
>     feature_id AS spot_42_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'spot_42_RNA';
> 
> --- ************************************************
> --- *** relation: telomerase_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The RNA component of telomerase, a rever ***
> --- *** se transcriptase that synthesises telome ***
> --- *** ric DNA.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW telomerase_rna AS
>   SELECT
>     feature_id AS telomerase_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'telomerase_RNA';
> 
> --- ************************************************
> --- *** relation: u1_snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** U1 is a small nuclear RNA (snRNA) compon ***
> --- *** ent of the spliceosome (involved in pre- ***
> --- *** mRNA splicing). Its 5' end forms complem ***
> --- *** entary base pairs with the 5' splice jun ***
> --- *** ction, thus defining the 5' donor site o ***
> --- *** f an intron. There are significant diffe ***
> --- *** rences in sequence and secondary structu ***
> --- *** re between metazoan and yeast U1 snRNAs, ***
> --- ***  the latter being much longer (568 nucle ***
> --- *** otides as compared to 164 nucleotides in ***
> --- ***  human). Nevertheless, secondary structu ***
> --- *** re predictions suggest that all U1 snRNA ***
> --- *** s share a 'common core' consisting of he ***
> --- *** lices I, II, the proximal region of III, ***
> --- ***  and IV.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW u1_snrna AS
>   SELECT
>     feature_id AS u1_snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U1_snRNA';
> 
> --- ************************************************
> --- *** relation: u2_snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** U2 is a small nuclear RNA (snRNA) compon ***
> --- *** ent of the spliceosome (involved in pre- ***
> --- *** mRNA splicing). Complementary binding be ***
> --- *** tween U2 snRNA (in an area lying towards ***
> --- ***  the 5' end but 3' to hairpin I) and the ***
> --- ***  branchpoint sequence (BPS) of the intro ***
> --- *** n results in the bulging out of an unpai ***
> --- *** red adenine, on the BPS, which initiates ***
> --- ***  a nucleophilic attack at the intronic 5 ***
> --- *** ' splice site, thus starting the first o ***
> --- *** f two transesterification reactions that ***
> --- ***  mediate splicing.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW u2_snrna AS
>   SELECT
>     feature_id AS u2_snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U2_snRNA';
> 
> --- ************************************************
> --- *** relation: u4_snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** U4 small nuclear RNA (U4 snRNA) is a com ***
> --- *** ponent of the major U2-dependent spliceo ***
> --- *** some. It forms a duplex with U6, and wit ***
> --- *** h each splicing round, it is displaced f ***
> --- *** rom U6 (and the spliceosome) in an ATP-d ***
> --- *** ependent manner, allowing U6 to refold a ***
> --- *** nd create the active site for splicing c ***
> --- *** atalysis. A recycling process involving  ***
> --- *** protein Prp24 re-anneals U4 and U6.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW u4_snrna AS
>   SELECT
>     feature_id AS u4_snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U4_snRNA';
> 
> --- ************************************************
> --- *** relation: u4atac_snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An snRNA required for the splicing of th ***
> --- *** e minor U12-dependent class of eukaryoti ***
> --- *** c nuclear introns. It forms a base paire ***
> --- *** d complex with U6atac_snRNA (SO:0000397) ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW u4atac_snrna AS
>   SELECT
>     feature_id AS u4atac_snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U4atac_snRNA';
> 
> --- ************************************************
> --- *** relation: u5_snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** U5 RNA is a component of both types of k ***
> --- *** nown spliceosome. The precise function o ***
> --- *** f this molecule is unknown, though it is ***
> --- ***  known that the 5' loop is required for  ***
> --- *** splice site selection and p220 binding,  ***
> --- *** and that both the 3' stem-loop and the S ***
> --- *** m site are important for Sm protein bind ***
> --- *** ing and cap methylation.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW u5_snrna AS
>   SELECT
>     feature_id AS u5_snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U5_snRNA';
> 
> --- ************************************************
> --- *** relation: u6_snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** U6 snRNA is a component of the spliceoso ***
> --- *** me which is involved in splicing pre-mRN ***
> --- *** A. The putative secondary structure cons ***
> --- *** ensus base pairing is confined to a shor ***
> --- *** t 5' stem loop, but U6 snRNA is thought  ***
> --- *** to form extensive base-pair interactions ***
> --- ***  with U4 snRNA.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW u6_snrna AS
>   SELECT
>     feature_id AS u6_snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U6_snRNA';
> 
> --- ************************************************
> --- *** relation: u6atac_snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** U6atac_snRNA is an snRNA required for th ***
> --- *** e splicing of the minor U12-dependent cl ***
> --- *** ass of eukaryotic nuclear introns. It fo ***
> --- *** rms a base paired complex with U4atac_sn ***
> --- *** RNA (SO:0000394).                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW u6atac_snrna AS
>   SELECT
>     feature_id AS u6atac_snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U6atac_snRNA';
> 
> --- ************************************************
> --- *** relation: u11_snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** U11 snRNA plays a role in splicing of th ***
> --- *** e minor U12-dependent class of eukaryoti ***
> --- *** c nuclear introns, similar to U1 snRNA i ***
> --- *** n the major class spliceosome it base pa ***
> --- *** irs to the conserved 5' splice site sequ ***
> --- *** ence.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW u11_snrna AS
>   SELECT
>     feature_id AS u11_snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U11_snRNA';
> 
> --- ************************************************
> --- *** relation: u12_snrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The U12 small nuclear (snRNA), together  ***
> --- *** with U4atac/U6atac, U5, and U11 snRNAs a ***
> --- *** nd associated proteins, forms a spliceos ***
> --- *** ome that cleaves a divergent class of lo ***
> --- *** w-abundance pre-mRNA introns.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW u12_snrna AS
>   SELECT
>     feature_id AS u12_snrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U12_snRNA';
> 
> --- ************************************************
> --- *** relation: sequence_attribute ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describes a quality of sequ ***
> --- *** ence.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_attribute AS
>   SELECT
>     feature_id AS sequence_attribute_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polymer_attribute' OR cvterm.name = 'feature_attribute' OR cvterm.name = 'sequence_location' OR cvterm.name = 'nucleic_acid' OR cvterm.name = 'synthetic_sequence' OR cvterm.name = 'topology_attribute' OR cvterm.name = 'peptidyl' OR cvterm.name = 'DNA' OR cvterm.name = 'RNA' OR cvterm.name = 'morpholino' OR cvterm.name = 'PNA' OR cvterm.name = 'LNA' OR cvterm.name = 'TNA' OR cvterm.name = 'GNA' OR cvterm.name = 'cDNA' OR cvterm.name = 'genomic_DNA' OR cvterm.name = 'single_stranded_cDNA' OR cvterm.name = 'double_stranded_cDNA' OR cvterm.name = 'R_GNA' OR cvterm.name = 'S_GNA' OR cvterm.name = 'random_sequence' OR cvterm.name = 'designed_sequence' OR cvterm.name = 'linear' OR cvterm.name = 'circular' OR cvterm.name = 'transcript_attribute' OR cvterm.name = 'bound_by_factor' OR cvterm.name = 'flanked' OR cvterm.name = 'gene_attribute' OR cvterm.name = 'retrotransposed' OR cvterm.name = 'transgenic' OR cvterm.name = 'natural' OR cvterm.name = 'engineered' OR cvterm.name = 'foreign' OR cvterm.name = 'fusion' OR cvterm.name = 'rescue' OR cvterm.name = 'wild_type' OR cvterm.name = 'conserved' OR cvterm.name = 'status' OR cvterm.name = 'intermediate' OR cvterm.name = 'recombinationally_rearranged' OR cvterm.name = 'cryptic' OR cvterm.name = 'strand_attribute' OR cvterm.name = 'direction_attribute' OR cvterm.name = 'enzymatic' OR cvterm.name = 'mobile' OR cvterm.name = 'edited' OR cvterm.name = 'capped' OR cvterm.name = 'mRNA_attribute' OR cvterm.name = 'trans_spliced' OR cvterm.name = 'alternatively_spliced' OR cvterm.name = 'monocistronic' OR cvterm.name = 'polycistronic' OR cvterm.name = 'polyadenylated' OR cvterm.name = 'exemplar' OR cvterm.name = 'frameshift' OR cvterm.name = 'recoded' OR cvterm.name = 'minus_1_frameshift' OR cvterm.name = 'minus_2_frameshift' OR cvterm.name = 'plus_1_frameshift' OR cvterm.name = 'plus_2_framshift' OR cvterm.name = 'codon_redefined' OR cvterm.name = 'recoded_by_translational_bypass' OR cvterm.name = 'translationally_frameshifted' OR cvterm.name = 'minus_1_translationally_frameshifted' OR cvterm.name = 'plus_1_translationally_frameshifted' OR cvterm.name = 'dicistronic' OR cvterm.name = 'bound_by_protein' OR cvterm.name = 'bound_by_nucleic_acid' OR cvterm.name = 'floxed' OR cvterm.name = 'FRT_flanked' OR cvterm.name = 'protein_coding' OR cvterm.name = 'non_protein_coding' OR cvterm.name = 'gene_to_gene_feature' OR cvterm.name = 'gene_array_member' OR cvterm.name = 'regulated' OR cvterm.name = 'epigenetically_modified' OR cvterm.name = 'encodes_alternately_spliced_transcripts' OR cvterm.name = 'encodes_alternate_transcription_start_sites' OR cvterm.name = 'intein_containing' OR cvterm.name = 'miRNA_encoding' OR cvterm.name = 'rRNA_encoding' OR cvterm.name = 'scRNA_encoding' OR cvterm.name = 'snoRNA_encoding' OR cvterm.name = 'snRNA_encoding' OR cvterm.name = 'SRP_RNA_encoding' OR cvterm.name = 'stRNA_encoding' OR cvterm.name = 'tmRNA_encoding' OR cvterm.name = 'tRNA_encoding' OR cvterm.name = 'gRNA_encoding' OR cvterm.name = 'C_D_box_snoRNA_encoding' OR cvterm.name = 'H_ACA_box_snoRNA_encoding' OR cvterm.name = 'overlapping' OR cvterm.name = 'inside_intron' OR cvterm.name = 'five_prime_three_prime_overlap' OR cvterm.name = 'five_prime_five_prime_overlap' OR cvterm.name = 'three_prime_three_prime_overlap' OR cvterm.name = 'three_prime_five_prime_overlap' OR cvterm.name = 'antisense' OR cvterm.name = 'inside_intron_antiparallel' OR cvterm.name = 'inside_intron_parallel' OR cvterm.name = 'operon_member' OR cvterm.name = 'gene_cassette_member' OR cvterm.name = 'gene_subarray_member' OR cvterm.name = 'member_of_regulon' OR cvterm.name = 'cassette_array_member' OR cvterm.name = 'transcriptionally_regulated' OR cvterm.name = 'post_translationally_regulated' OR cvterm.name = 'translationally_regulated' OR cvterm.name = 'imprinted' OR cvterm.name = 'transcriptionally_constitutive' OR cvterm.name = 'transcriptionally_induced' OR cvterm.name = 'transcriptionally_repressed' OR cvterm.name = 'autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'silenced' OR cvterm.name = 'silenced_by_DNA_modification' OR cvterm.name = 'silenced_by_RNA_interference' OR cvterm.name = 'silenced_by_histone_modification' OR cvterm.name = 'silenced_by_DNA_methylation' OR cvterm.name = 'silenced_by_histone_methylation' OR cvterm.name = 'silenced_by_histone_deacetylation' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'post_translationally_regulated_by_protein_stability' OR cvterm.name = 'post_translationally_regulated_by_protein_modification' OR cvterm.name = 'maternally_imprinted' OR cvterm.name = 'paternally_imprinted' OR cvterm.name = 'imprinted' OR cvterm.name = 'allelically_excluded' OR cvterm.name = 'rearranged_at_DNA_level' OR cvterm.name = 'maternally_imprinted' OR cvterm.name = 'paternally_imprinted' OR cvterm.name = 'encodes_1_polypeptide' OR cvterm.name = 'encodes_greater_than_1_polypeptide' OR cvterm.name = 'encodes_disjoint_polypeptides' OR cvterm.name = 'encodes_overlapping_peptides' OR cvterm.name = 'encodes_different_polypeptides_different_stop' OR cvterm.name = 'encodes_overlapping_peptides_different_start' OR cvterm.name = 'encodes_overlapping_polypeptides_different_start_and_stop' OR cvterm.name = 'homologous' OR cvterm.name = 'syntenic' OR cvterm.name = 'orthologous' OR cvterm.name = 'paralogous' OR cvterm.name = 'fragmentary' OR cvterm.name = 'predicted' OR cvterm.name = 'validated' OR cvterm.name = 'invalidated' OR cvterm.name = 'independently_known' OR cvterm.name = 'consensus' OR cvterm.name = 'low_complexity' OR cvterm.name = 'supported_by_sequence_similarity' OR cvterm.name = 'orphan' OR cvterm.name = 'predicted_by_ab_initio_computation' OR cvterm.name = 'supported_by_domain_match' OR cvterm.name = 'supported_by_EST_or_cDNA' OR cvterm.name = 'experimentally_determined' OR cvterm.name = 'invalidated_by_chimeric_cDNA' OR cvterm.name = 'invalidated_by_genomic_contamination' OR cvterm.name = 'invalidated_by_genomic_polyA_primed_cDNA' OR cvterm.name = 'invalidated_by_partial_processing' OR cvterm.name = 'single' OR cvterm.name = 'double' OR cvterm.name = 'forward' OR cvterm.name = 'reverse' OR cvterm.name = 'ribozymic' OR cvterm.name = 'organelle_sequence' OR cvterm.name = 'plasmid_location' OR cvterm.name = 'proviral_location' OR cvterm.name = 'macronuclear_sequence' OR cvterm.name = 'micronuclear_sequence' OR cvterm.name = 'mitochondrial_sequence' OR cvterm.name = 'nuclear_sequence' OR cvterm.name = 'nucleomorphic_sequence' OR cvterm.name = 'plastid_sequence' OR cvterm.name = 'mitochondrial_DNA' OR cvterm.name = 'apicoplast_sequence' OR cvterm.name = 'chromoplast_sequence' OR cvterm.name = 'chloroplast_sequence' OR cvterm.name = 'cyanelle_sequence' OR cvterm.name = 'leucoplast_sequence' OR cvterm.name = 'proplastid_sequence' OR cvterm.name = 'chloroplast_DNA' OR cvterm.name = 'endogenous_retroviral_sequence' OR cvterm.name = 'sequence_attribute';
> 
> --- ************************************************
> --- *** relation: gene_attribute ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_attribute AS
>   SELECT
>     feature_id AS gene_attribute_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'protein_coding' OR cvterm.name = 'non_protein_coding' OR cvterm.name = 'gene_to_gene_feature' OR cvterm.name = 'gene_array_member' OR cvterm.name = 'regulated' OR cvterm.name = 'epigenetically_modified' OR cvterm.name = 'encodes_alternately_spliced_transcripts' OR cvterm.name = 'encodes_alternate_transcription_start_sites' OR cvterm.name = 'intein_containing' OR cvterm.name = 'miRNA_encoding' OR cvterm.name = 'rRNA_encoding' OR cvterm.name = 'scRNA_encoding' OR cvterm.name = 'snoRNA_encoding' OR cvterm.name = 'snRNA_encoding' OR cvterm.name = 'SRP_RNA_encoding' OR cvterm.name = 'stRNA_encoding' OR cvterm.name = 'tmRNA_encoding' OR cvterm.name = 'tRNA_encoding' OR cvterm.name = 'gRNA_encoding' OR cvterm.name = 'C_D_box_snoRNA_encoding' OR cvterm.name = 'H_ACA_box_snoRNA_encoding' OR cvterm.name = 'overlapping' OR cvterm.name = 'inside_intron' OR cvterm.name = 'five_prime_three_prime_overlap' OR cvterm.name = 'five_prime_five_prime_overlap' OR cvterm.name = 'three_prime_three_prime_overlap' OR cvterm.name = 'three_prime_five_prime_overlap' OR cvterm.name = 'antisense' OR cvterm.name = 'inside_intron_antiparallel' OR cvterm.name = 'inside_intron_parallel' OR cvterm.name = 'operon_member' OR cvterm.name = 'gene_cassette_member' OR cvterm.name = 'gene_subarray_member' OR cvterm.name = 'member_of_regulon' OR cvterm.name = 'cassette_array_member' OR cvterm.name = 'transcriptionally_regulated' OR cvterm.name = 'post_translationally_regulated' OR cvterm.name = 'translationally_regulated' OR cvterm.name = 'imprinted' OR cvterm.name = 'transcriptionally_constitutive' OR cvterm.name = 'transcriptionally_induced' OR cvterm.name = 'transcriptionally_repressed' OR cvterm.name = 'autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'silenced' OR cvterm.name = 'silenced_by_DNA_modification' OR cvterm.name = 'silenced_by_RNA_interference' OR cvterm.name = 'silenced_by_histone_modification' OR cvterm.name = 'silenced_by_DNA_methylation' OR cvterm.name = 'silenced_by_histone_methylation' OR cvterm.name = 'silenced_by_histone_deacetylation' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'post_translationally_regulated_by_protein_stability' OR cvterm.name = 'post_translationally_regulated_by_protein_modification' OR cvterm.name = 'maternally_imprinted' OR cvterm.name = 'paternally_imprinted' OR cvterm.name = 'imprinted' OR cvterm.name = 'allelically_excluded' OR cvterm.name = 'rearranged_at_DNA_level' OR cvterm.name = 'maternally_imprinted' OR cvterm.name = 'paternally_imprinted' OR cvterm.name = 'encodes_1_polypeptide' OR cvterm.name = 'encodes_greater_than_1_polypeptide' OR cvterm.name = 'encodes_disjoint_polypeptides' OR cvterm.name = 'encodes_overlapping_peptides' OR cvterm.name = 'encodes_different_polypeptides_different_stop' OR cvterm.name = 'encodes_overlapping_peptides_different_start' OR cvterm.name = 'encodes_overlapping_polypeptides_different_start_and_stop' OR cvterm.name = 'gene_attribute';
> 
> --- ************************************************
> --- *** relation: u14_snorna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** U14 small nucleolar RNA (U14 snoRNA) is  ***
> --- *** required for early cleavages of eukaryot ***
> --- *** ic precursor rRNAs. In yeasts, this mole ***
> --- *** cule possess a stem-loop region (known a ***
> --- *** s the Y-domain) which is essential for f ***
> --- *** unction. A similar structure, but with a ***
> --- ***  different consensus sequence, is found  ***
> --- *** in plants, but is absent in vertebrates. ***
> --- ************************************************
> ---
> 
> CREATE VIEW u14_snorna AS
>   SELECT
>     feature_id AS u14_snorna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U14_snoRNA';
> 
> --- ************************************************
> --- *** relation: vault_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A family of RNAs are found as part of th ***
> --- *** e enigmatic vault ribonucleoprotein comp ***
> --- *** lex. The complex consists of a major vau ***
> --- *** lt protein (MVP), two minor vault protei ***
> --- *** ns (VPARP and TEP1), and several small u ***
> --- *** ntranslated RNA molecules. It has been s ***
> --- *** uggested that the vault complex is invol ***
> --- *** ved in drug resistance.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW vault_rna AS
>   SELECT
>     feature_id AS vault_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'vault_RNA';
> 
> --- ************************************************
> --- *** relation: y_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Y RNAs are components of the Ro ribonucl ***
> --- *** eoprotein particle (Ro RNP), in associat ***
> --- *** ion with Ro60 and La proteins. The Y RNA ***
> --- *** s and Ro60 and La proteins are well cons ***
> --- *** erved, but the function of the Ro RNP is ***
> --- ***  not known. In humans the RNA component  ***
> --- *** can be one of four small RNAs: hY1, hY3, ***
> --- ***  hY4 and hY5. These small RNAs are predi ***
> --- *** cted to fold into a conserved secondary  ***
> --- *** structure containing three stem structur ***
> --- *** es. The largest of the four, hY1, contai ***
> --- *** ns an additional hairpin.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW y_rna AS
>   SELECT
>     feature_id AS y_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'Y_RNA';
> 
> --- ************************************************
> --- *** relation: twintron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An intron within an intron. Twintrons ar ***
> --- *** e group II or III introns, into which an ***
> --- *** other group II or III intron has been tr ***
> --- *** ansposed.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW twintron AS
>   SELECT
>     feature_id AS twintron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'twintron';
> 
> --- ************************************************
> --- *** relation: rrna_18s ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A large polynucleotide in eukaryotes, wh ***
> --- *** ich functions as the small subunit of th ***
> --- *** e ribosome.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_18s AS
>   SELECT
>     feature_id AS rrna_18s_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_18S';
> 
> --- ************************************************
> --- *** relation: binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region on the surface of a molecule th ***
> --- *** at may interact with another molecule. W ***
> --- *** hen applied to polypeptides: Amino acids ***
> --- ***  involved in binding or interactions. It ***
> --- ***  can also apply to an amino acid bond wh ***
> --- *** ich is represented by the positions of t ***
> --- *** he two flanking amino acids.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW binding_site AS
>   SELECT
>     feature_id AS binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'protein_binding_site' OR cvterm.name = 'miRNA_target_site' OR cvterm.name = 'epitope' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'DNA_binding_site' OR cvterm.name = 'primer_binding_site' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'nuclease_binding_site' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'histone_binding_site' OR cvterm.name = 'insulator_binding_site' OR cvterm.name = 'enhancer_binding_site' OR cvterm.name = 'restriction_enzyme_binding_site' OR cvterm.name = 'nuclease_sensitive_site' OR cvterm.name = 'homing_endonuclease_binding_site' OR cvterm.name = 'nuclease_hypersensitive_site' OR cvterm.name = 'group_1_intron_homing_endonuclease_target_region' OR cvterm.name = 'DNAseI_hypersensitive_site' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'binding_site';
> 
> --- ************************************************
> --- *** relation: protein_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a molecule that binds to a p ***
> --- *** rotein.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW protein_binding_site AS
>   SELECT
>     feature_id AS protein_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nuclease_binding_site' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'histone_binding_site' OR cvterm.name = 'insulator_binding_site' OR cvterm.name = 'enhancer_binding_site' OR cvterm.name = 'restriction_enzyme_binding_site' OR cvterm.name = 'nuclease_sensitive_site' OR cvterm.name = 'homing_endonuclease_binding_site' OR cvterm.name = 'nuclease_hypersensitive_site' OR cvterm.name = 'group_1_intron_homing_endonuclease_target_region' OR cvterm.name = 'DNAseI_hypersensitive_site' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'protein_binding_site';
> 
> --- ************************************************
> --- *** relation: rescue_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region that rescues.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW rescue_region AS
>   SELECT
>     feature_id AS rescue_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_rescue_region' OR cvterm.name = 'rescue_region';
> 
> --- ************************************************
> --- *** relation: restriction_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of polynucleotide sequence prod ***
> --- *** uced by digestion with a restriction end ***
> --- *** onuclease.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW restriction_fragment AS
>   SELECT
>     feature_id AS restriction_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RFLP_fragment' OR cvterm.name = 'restriction_fragment';
> 
> --- ************************************************
> --- *** relation: sequence_difference ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region where the sequence differs from ***
> --- ***  that of a specified sequence.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_difference AS
>   SELECT
>     feature_id AS sequence_difference_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'possible_base_call_error' OR cvterm.name = 'possible_assembly_error' OR cvterm.name = 'sequence_difference';
> 
> --- ************************************************
> --- *** relation: invalidated_by_genomic_contamination ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a feature that  ***
> --- *** is invalidated due to genomic contaminat ***
> --- *** ion.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW invalidated_by_genomic_contamination AS
>   SELECT
>     feature_id AS invalidated_by_genomic_contamination_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'invalidated_by_genomic_contamination';
> 
> --- ************************************************
> --- *** relation: invalidated_by_genomic_polya_primed_cdna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a feature that  ***
> --- *** is invalidated due to polyA priming.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW invalidated_by_genomic_polya_primed_cdna AS
>   SELECT
>     feature_id AS invalidated_by_genomic_polya_primed_cdna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'invalidated_by_genomic_polyA_primed_cDNA';
> 
> --- ************************************************
> --- *** relation: invalidated_by_partial_processing ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a feature that  ***
> --- *** is invalidated due to partial processing ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW invalidated_by_partial_processing AS
>   SELECT
>     feature_id AS invalidated_by_partial_processing_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'invalidated_by_partial_processing';
> 
> --- ************************************************
> --- *** relation: polypeptide_domain ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A structurally or functionally defined p ***
> --- *** rotein region. In proteins with multiple ***
> --- ***  domains, the combination of the domains ***
> --- ***  determines the function of the protein. ***
> --- ***  A region which has been shown to recur  ***
> --- *** throughout evolution.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_domain AS
>   SELECT
>     feature_id AS polypeptide_domain_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_domain';
> 
> --- ************************************************
> --- *** relation: signal_peptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The signal_peptide is a short region of  ***
> --- *** the peptide located at the N-terminus th ***
> --- *** at directs the protein to be secreted or ***
> --- ***  part of membrane components.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW signal_peptide AS
>   SELECT
>     feature_id AS signal_peptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'signal_peptide';
> 
> --- ************************************************
> --- *** relation: mature_protein_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The polypeptide sequence that remains wh ***
> --- *** en the cleaved peptide regions have been ***
> --- ***  cleaved from the immature peptide.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW mature_protein_region AS
>   SELECT
>     feature_id AS mature_protein_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'active_peptide' OR cvterm.name = 'mature_protein_region';
> 
> --- ************************************************
> --- *** relation: five_prime_terminal_inverted_repeat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_terminal_inverted_repeat AS
>   SELECT
>     feature_id AS five_prime_terminal_inverted_repeat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_terminal_inverted_repeat';
> 
> --- ************************************************
> --- *** relation: three_prime_terminal_inverted_repeat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_terminal_inverted_repeat AS
>   SELECT
>     feature_id AS three_prime_terminal_inverted_repeat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_terminal_inverted_repeat';
> 
> --- ************************************************
> --- *** relation: u5_ltr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW u5_ltr_region AS
>   SELECT
>     feature_id AS u5_ltr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'U5_LTR_region';
> 
> --- ************************************************
> --- *** relation: r_ltr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW r_ltr_region AS
>   SELECT
>     feature_id AS r_ltr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'R_LTR_region';
> 
> --- ************************************************
> --- *** relation: u3_ltr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW u3_ltr_region AS
>   SELECT
>     feature_id AS u3_ltr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'U3_LTR_region';
> 
> --- ************************************************
> --- *** relation: five_prime_ltr ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_ltr AS
>   SELECT
>     feature_id AS five_prime_ltr_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_LTR';
> 
> --- ************************************************
> --- *** relation: three_prime_ltr ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_ltr AS
>   SELECT
>     feature_id AS three_prime_ltr_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_LTR';
> 
> --- ************************************************
> --- *** relation: r_five_prime_ltr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW r_five_prime_ltr_region AS
>   SELECT
>     feature_id AS r_five_prime_ltr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'R_five_prime_LTR_region';
> 
> --- ************************************************
> --- *** relation: u5_five_prime_ltr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW u5_five_prime_ltr_region AS
>   SELECT
>     feature_id AS u5_five_prime_ltr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U5_five_prime_LTR_region';
> 
> --- ************************************************
> --- *** relation: u3_five_prime_ltr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW u3_five_prime_ltr_region AS
>   SELECT
>     feature_id AS u3_five_prime_ltr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U3_five_prime_LTR_region';
> 
> --- ************************************************
> --- *** relation: r_three_prime_ltr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW r_three_prime_ltr_region AS
>   SELECT
>     feature_id AS r_three_prime_ltr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'R_three_prime_LTR_region';
> 
> --- ************************************************
> --- *** relation: u3_three_prime_ltr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW u3_three_prime_ltr_region AS
>   SELECT
>     feature_id AS u3_three_prime_ltr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U3_three_prime_LTR_region';
> 
> --- ************************************************
> --- *** relation: u5_three_prime_ltr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW u5_three_prime_ltr_region AS
>   SELECT
>     feature_id AS u5_three_prime_ltr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U5_three_prime_LTR_region';
> 
> --- ************************************************
> --- *** relation: non_ltr_retrotransposon_polymeric_tract ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A polymeric tract, such as poly(dA), wit ***
> --- *** hin a non_LTR_retrotransposon.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_ltr_retrotransposon_polymeric_tract AS
>   SELECT
>     feature_id AS non_ltr_retrotransposon_polymeric_tract_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_LTR_retrotransposon_polymeric_tract';
> 
> --- ************************************************
> --- *** relation: target_site_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence of the target DNA that is dup ***
> --- *** licated when a transposable element or p ***
> --- *** hage inserts; usually found at each end  ***
> --- *** the insertion.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW target_site_duplication AS
>   SELECT
>     feature_id AS target_site_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'target_site_duplication';
> 
> --- ************************************************
> --- *** relation: rr_tract ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A polypurine tract within an LTR_retrotr ***
> --- *** ansposon.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW rr_tract AS
>   SELECT
>     feature_id AS rr_tract_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RR_tract';
> 
> --- ************************************************
> --- *** relation: ars ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence that can autonomously replica ***
> --- *** te, as a plasmid, when transformed into  ***
> --- *** a bacterial host.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW ars AS
>   SELECT
>     feature_id AS ars_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ARS';
> 
> --- ************************************************
> --- *** relation: inverted_ring_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW inverted_ring_chromosome AS
>   SELECT
>     feature_id AS inverted_ring_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inverted_ring_chromosome';
> 
> --- ************************************************
> --- *** relation: vector_replicon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A replicon that has been modified to act ***
> --- ***  as a vector for foreign sequence.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW vector_replicon AS
>   SELECT
>     feature_id AS vector_replicon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'YAC' OR cvterm.name = 'BAC' OR cvterm.name = 'PAC' OR cvterm.name = 'cosmid' OR cvterm.name = 'phagemid' OR cvterm.name = 'fosmid' OR cvterm.name = 'lambda_vector' OR cvterm.name = 'plasmid_vector' OR cvterm.name = 'vector_replicon';
> 
> --- ************************************************
> --- *** relation: ss_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A single stranded oligonucleotide.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW ss_oligo AS
>   SELECT
>     feature_id AS ss_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'primer' OR cvterm.name = 'sequencing_primer' OR cvterm.name = 'forward_primer' OR cvterm.name = 'reverse_primer' OR cvterm.name = 'ss_oligo';
> 
> --- ************************************************
> --- *** relation: ds_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A double stranded oligonucleotide.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW ds_oligo AS
>   SELECT
>     feature_id AS ds_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNAi_reagent' OR cvterm.name = 'DNA_constraint_sequence' OR cvterm.name = 'ds_oligo';
> 
> --- ************************************************
> --- *** relation: polymer_attribute ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe the kind of bio ***
> --- *** logical sequence.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW polymer_attribute AS
>   SELECT
>     feature_id AS polymer_attribute_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nucleic_acid' OR cvterm.name = 'synthetic_sequence' OR cvterm.name = 'topology_attribute' OR cvterm.name = 'peptidyl' OR cvterm.name = 'DNA' OR cvterm.name = 'RNA' OR cvterm.name = 'morpholino' OR cvterm.name = 'PNA' OR cvterm.name = 'LNA' OR cvterm.name = 'TNA' OR cvterm.name = 'GNA' OR cvterm.name = 'cDNA' OR cvterm.name = 'genomic_DNA' OR cvterm.name = 'single_stranded_cDNA' OR cvterm.name = 'double_stranded_cDNA' OR cvterm.name = 'R_GNA' OR cvterm.name = 'S_GNA' OR cvterm.name = 'random_sequence' OR cvterm.name = 'designed_sequence' OR cvterm.name = 'linear' OR cvterm.name = 'circular' OR cvterm.name = 'polymer_attribute';
> 
> --- ************************************************
> --- *** relation: three_prime_noncoding_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Non-coding exon in the 3' UTR.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_noncoding_exon AS
>   SELECT
>     feature_id AS three_prime_noncoding_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_noncoding_exon';
> 
> --- ************************************************
> --- *** relation: five_prime_noncoding_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Non-coding exon in the 5' UTR.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_noncoding_exon AS
>   SELECT
>     feature_id AS five_prime_noncoding_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_noncoding_exon';
> 
> --- ************************************************
> --- *** relation: utr_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Intron located in the untranslated regio ***
> --- *** n.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW utr_intron AS
>   SELECT
>     feature_id AS utr_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_UTR_intron' OR cvterm.name = 'three_prime_UTR_intron' OR cvterm.name = 'UTR_intron';
> 
> --- ************************************************
> --- *** relation: five_prime_utr_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An intron located in the 5' UTR.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_utr_intron AS
>   SELECT
>     feature_id AS five_prime_utr_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_UTR_intron';
> 
> --- ************************************************
> --- *** relation: three_prime_utr_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An intron located in the 3' UTR.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_utr_intron AS
>   SELECT
>     feature_id AS three_prime_utr_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_UTR_intron';
> 
> --- ************************************************
> --- *** relation: random_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence of nucleotides or amino acids ***
> --- ***  which, by design, has a "random" order  ***
> --- *** of components, given a predetermined inp ***
> --- *** ut frequency of these components.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW random_sequence AS
>   SELECT
>     feature_id AS random_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'random_sequence';
> 
> --- ************************************************
> --- *** relation: interband ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A light region between two darkly staini ***
> --- *** ng bands in a polytene chromosome.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW interband AS
>   SELECT
>     feature_id AS interband_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'interband';
> 
> --- ************************************************
> --- *** relation: gene_with_polyadenylated_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes a polyadenylated mRN ***
> --- *** A.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_polyadenylated_mrna AS
>   SELECT
>     feature_id AS gene_with_polyadenylated_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_polyadenylated_mRNA';
> 
> --- ************************************************
> --- *** relation: transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW transposition AS
>   SELECT
>     feature_id AS transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'interchromosomal_transposition' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'deficient_interchromosomal_transposition' OR cvterm.name = 'inverted_interchromosomal_transposition' OR cvterm.name = 'uninverted_interchromosomal_transposition' OR cvterm.name = 'unorientated_interchromosomal_transposition' OR cvterm.name = 'transposition';
> 
> --- ************************************************
> --- *** relation: rasirna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A small, 17-28-nt, small interfering RNA ***
> --- ***  derived from transcripts of repetitive  ***
> --- *** elements.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW rasirna AS
>   SELECT
>     feature_id AS rasirna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rasiRNA';
> 
> --- ************************************************
> --- *** relation: gene_with_mrna_with_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes an mRNA with a frame ***
> --- *** shift.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_mrna_with_frameshift AS
>   SELECT
>     feature_id AS gene_with_mrna_with_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_mRNA_with_frameshift';
> 
> --- ************************************************
> --- *** relation: recombinationally_rearranged_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is recombinationally rearran ***
> --- *** ged.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW recombinationally_rearranged_gene AS
>   SELECT
>     feature_id AS recombinationally_rearranged_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recombinationally_inverted_gene' OR cvterm.name = 'recombinationally_rearranged_vertebrate_immune_system_gene' OR cvterm.name = 'recombinationally_rearranged_gene';
> 
> --- ************************************************
> --- *** relation: interchromosomal_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome duplication involving an in ***
> --- *** sertion from another chromosome.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW interchromosomal_duplication AS
>   SELECT
>     feature_id AS interchromosomal_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'interchromosomal_duplication';
> 
> --- ************************************************
> --- *** relation: d_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Germline genomic DNA including D-region  ***
> --- *** with 5' UTR and 3' UTR, also designated  ***
> --- *** as D-segment.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_gene AS
>   SELECT
>     feature_id AS d_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_gene';
> 
> --- ************************************************
> --- *** relation: gene_with_trans_spliced_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene with a transcript that is trans-s ***
> --- *** pliced.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_trans_spliced_transcript AS
>   SELECT
>     feature_id AS gene_with_trans_spliced_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_trans_spliced_transcript';
> 
> --- ************************************************
> --- *** relation: vertebrate_immunoglobulin_t_cell_receptor_segment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW vertebrate_immunoglobulin_t_cell_receptor_segment AS
>   SELECT
>     feature_id AS vertebrate_immunoglobulin_t_cell_receptor_segment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_gene' OR cvterm.name = 'V_gene' OR cvterm.name = 'J_gene' OR cvterm.name = 'C_gene' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_segment';
> 
> --- ************************************************
> --- *** relation: inversion_derived_bipartite_deficiency ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome generated by recombination  ***
> --- *** between two inversions; has a deficiency ***
> --- ***  at each end of the inversion.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_derived_bipartite_deficiency AS
>   SELECT
>     feature_id AS inversion_derived_bipartite_deficiency_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_derived_bipartite_deficiency';
> 
> --- ************************************************
> --- *** relation: pseudogenic_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non-functional descendent of a functio ***
> --- *** nal entity.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudogenic_region AS
>   SELECT
>     feature_id AS pseudogenic_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pseudogene' OR cvterm.name = 'decayed_exon' OR cvterm.name = 'pseudogenic_exon' OR cvterm.name = 'pseudogenic_transcript' OR cvterm.name = 'pseudogenic_rRNA' OR cvterm.name = 'pseudogenic_tRNA' OR cvterm.name = 'processed_pseudogene' OR cvterm.name = 'pseudogene_by_unequal_crossing_over' OR cvterm.name = 'nuclear_mt_pseudogene' OR cvterm.name = 'cassette_pseudogene' OR cvterm.name = 'pseudogenic_region';
> 
> --- ************************************************
> --- *** relation: encodes_alternately_spliced_transcripts ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes more than one transc ***
> --- *** ript.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW encodes_alternately_spliced_transcripts AS
>   SELECT
>     feature_id AS encodes_alternately_spliced_transcripts_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'encodes_1_polypeptide' OR cvterm.name = 'encodes_greater_than_1_polypeptide' OR cvterm.name = 'encodes_disjoint_polypeptides' OR cvterm.name = 'encodes_overlapping_peptides' OR cvterm.name = 'encodes_different_polypeptides_different_stop' OR cvterm.name = 'encodes_overlapping_peptides_different_start' OR cvterm.name = 'encodes_overlapping_polypeptides_different_start_and_stop' OR cvterm.name = 'encodes_alternately_spliced_transcripts';
> 
> --- ************************************************
> --- *** relation: decayed_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non-functional descendant of an exon.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW decayed_exon AS
>   SELECT
>     feature_id AS decayed_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'decayed_exon';
> 
> --- ************************************************
> --- *** relation: inversion_derived_deficiency_plus_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome generated by recombination  ***
> --- *** between two inversions; there is a defic ***
> --- *** iency at one end of the inversion and a  ***
> --- *** duplication at the other end of the inve ***
> --- *** rsion.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_derived_deficiency_plus_duplication AS
>   SELECT
>     feature_id AS inversion_derived_deficiency_plus_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_derived_deficiency_plus_duplication';
> 
> --- ************************************************
> --- *** relation: v_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Germline genomic DNA including L-part1,  ***
> --- *** V-intron and V-exon, with the 5' UTR and ***
> --- ***  3' UTR.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_gene AS
>   SELECT
>     feature_id AS v_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_gene';
> 
> --- ************************************************
> --- *** relation: post_translationally_regulated_by_protein_stability ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a gene sequence  ***
> --- *** where the resulting protein is regulated ***
> --- ***  by the stability of the resulting prote ***
> --- *** in.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW post_translationally_regulated_by_protein_stability AS
>   SELECT
>     feature_id AS post_translationally_regulated_by_protein_stability_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'post_translationally_regulated_by_protein_stability';
> 
> --- ************************************************
> --- *** relation: golden_path_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** One of the pieces of sequence that make  ***
> --- *** up a golden path.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW golden_path_fragment AS
>   SELECT
>     feature_id AS golden_path_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'golden_path_fragment';
> 
> --- ************************************************
> --- *** relation: post_translationally_regulated_by_protein_modification ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a gene sequence  ***
> --- *** where the resulting protein is modified  ***
> --- *** to regulate it.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW post_translationally_regulated_by_protein_modification AS
>   SELECT
>     feature_id AS post_translationally_regulated_by_protein_modification_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'post_translationally_regulated_by_protein_modification';
> 
> --- ************************************************
> --- *** relation: j_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Germline genomic DNA of an immunoglobuli ***
> --- *** n/T-cell receptor gene including J-regio ***
> --- *** n with 5' UTR (SO:0000204) and 3' UTR (S ***
> --- *** O:0000205), also designated as J-segment ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW j_gene AS
>   SELECT
>     feature_id AS j_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'J_gene';
> 
> --- ************************************************
> --- *** relation: autoregulated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The gene product is involved in its own  ***
> --- *** transcriptional regulation.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW autoregulated AS
>   SELECT
>     feature_id AS autoregulated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'autoregulated';
> 
> --- ************************************************
> --- *** relation: tiling_path ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A set of regions which overlap with mini ***
> --- *** mal polymorphism to form a linear sequen ***
> --- *** ce.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW tiling_path AS
>   SELECT
>     feature_id AS tiling_path_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tiling_path';
> 
> --- ************************************************
> --- *** relation: negatively_autoregulated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The gene product is involved in its own  ***
> --- *** transcriptional regulation where it decr ***
> --- *** eases transcription.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW negatively_autoregulated AS
>   SELECT
>     feature_id AS negatively_autoregulated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'negatively_autoregulated';
> 
> --- ************************************************
> --- *** relation: tiling_path_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A piece of sequence that makes up a tili ***
> --- *** ng_path (SO:0000472).                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW tiling_path_fragment AS
>   SELECT
>     feature_id AS tiling_path_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tiling_path_clone' OR cvterm.name = 'tiling_path_fragment';
> 
> --- ************************************************
> --- *** relation: positively_autoregulated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The gene product is involved in its own  ***
> --- *** transcriptional regulation, where it inc ***
> --- *** reases transcription.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW positively_autoregulated AS
>   SELECT
>     feature_id AS positively_autoregulated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'positively_autoregulated';
> 
> --- ************************************************
> --- *** relation: contig_read ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA sequencer read which is part of a  ***
> --- *** contig.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW contig_read AS
>   SELECT
>     feature_id AS contig_read_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'contig_read';
> 
> --- ************************************************
> --- *** relation: c_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene including C-region (and intro ***
> --- *** ns if present) with 5' UTR (SO:0000204)  ***
> --- *** and 3' UTR (SO:0000205).                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_gene AS
>   SELECT
>     feature_id AS c_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_gene';
> 
> --- ************************************************
> --- *** relation: trans_spliced_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that is trans-spliced.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW trans_spliced_transcript AS
>   SELECT
>     feature_id AS trans_spliced_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'trans_spliced_transcript';
> 
> --- ************************************************
> --- *** relation: tiling_path_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A clone which is part of a tiling path.  ***
> --- *** A tiling path is a set of sequencing sub ***
> --- *** strates, typically clones, which have be ***
> --- *** en selected in order to efficiently cove ***
> --- *** r a region of the genome in preparation  ***
> --- *** for sequencing and assembly.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW tiling_path_clone AS
>   SELECT
>     feature_id AS tiling_path_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tiling_path_clone';
> 
> --- ************************************************
> --- *** relation: terminal_inverted_repeat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An inverted repeat (SO:0000294) occuring ***
> --- ***  at the termini of a DNA transposon.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW terminal_inverted_repeat AS
>   SELECT
>     feature_id AS terminal_inverted_repeat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_terminal_inverted_repeat' OR cvterm.name = 'three_prime_terminal_inverted_repeat' OR cvterm.name = 'terminal_inverted_repeat';
> 
> --- ************************************************
> --- *** relation: vertebrate_immunoglobulin_t_cell_receptor_gene_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW vertebrate_immunoglobulin_t_cell_receptor_gene_cluster AS
>   SELECT
>     feature_id AS vertebrate_immunoglobulin_t_cell_receptor_gene_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_J_C_cluster' OR cvterm.name = 'J_C_cluster' OR cvterm.name = 'J_cluster' OR cvterm.name = 'V_cluster' OR cvterm.name = 'V_J_cluster' OR cvterm.name = 'V_J_C_cluster' OR cvterm.name = 'C_cluster' OR cvterm.name = 'D_cluster' OR cvterm.name = 'D_J_cluster' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster';
> 
> --- ************************************************
> --- *** relation: nc_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript that is never trans ***
> --- *** lated into a protein.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW nc_primary_transcript AS
>   SELECT
>     feature_id AS nc_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'scRNA_primary_transcript' OR cvterm.name = 'rRNA_primary_transcript' OR cvterm.name = 'tRNA_primary_transcript' OR cvterm.name = 'snRNA_primary_transcript' OR cvterm.name = 'snoRNA_primary_transcript' OR cvterm.name = 'tmRNA_primary_transcript' OR cvterm.name = 'SRP_RNA_primary_transcript' OR cvterm.name = 'miRNA_primary_transcript' OR cvterm.name = 'rRNA_small_subunit_primary_transcript' OR cvterm.name = 'rRNA_large_subunit_primary_transcript' OR cvterm.name = 'alanine_tRNA_primary_transcript' OR cvterm.name = 'arginine_tRNA_primary_transcript' OR cvterm.name = 'asparagine_tRNA_primary_transcript' OR cvterm.name = 'aspartic_acid_tRNA_primary_transcript' OR cvterm.name = 'cysteine_tRNA_primary_transcript' OR cvterm.name = 'glutamic_acid_tRNA_primary_transcript' OR cvterm.name = 'glutamine_tRNA_primary_transcript' OR cvterm.name = 'glycine_tRNA_primary_transcript' OR cvterm.name = 'histidine_tRNA_primary_transcript' OR cvterm.name = 'isoleucine_tRNA_primary_transcript' OR cvterm.name = 'leucine_tRNA_primary_transcript' OR cvterm.name = 'lysine_tRNA_primary_transcript' OR cvterm.name = 'methionine_tRNA_primary_transcript' OR cvterm.name = 'phenylalanine_tRNA_primary_transcript' OR cvterm.name = 'proline_tRNA_primary_transcript' OR cvterm.name = 'serine_tRNA_primary_transcript' OR cvterm.name = 'threonine_tRNA_primary_transcript' OR cvterm.name = 'tryptophan_tRNA_primary_transcript' OR cvterm.name = 'tyrosine_tRNA_primary_transcript' OR cvterm.name = 'valine_tRNA_primary_transcript' OR cvterm.name = 'pyrrolysine_tRNA_primary_transcript' OR cvterm.name = 'selenocysteine_tRNA_primary_transcript' OR cvterm.name = 'methylation_guide_snoRNA_primary_transcript' OR cvterm.name = 'rRNA_cleavage_snoRNA_primary_transcript' OR cvterm.name = 'C_D_box_snoRNA_primary_transcript' OR cvterm.name = 'H_ACA_box_snoRNA_primary_transcript' OR cvterm.name = 'U14_snoRNA_primary_transcript' OR cvterm.name = 'stRNA_primary_transcript' OR cvterm.name = 'nc_primary_transcript';
> 
> --- ************************************************
> --- *** relation: three_prime_coding_exon_noncoding_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequence of the 3' exon that is not  ***
> --- *** coding.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_coding_exon_noncoding_region AS
>   SELECT
>     feature_id AS three_prime_coding_exon_noncoding_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_coding_exon_noncoding_region';
> 
> --- ************************************************
> --- *** relation: dj_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one DJ-gene, and one J ***
> --- *** -gene.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW dj_j_cluster AS
>   SELECT
>     feature_id AS dj_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DJ_J_cluster';
> 
> --- ************************************************
> --- *** relation: five_prime_coding_exon_noncoding_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequence of the 5' exon preceding th ***
> --- *** e start codon.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_coding_exon_noncoding_region AS
>   SELECT
>     feature_id AS five_prime_coding_exon_noncoding_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_coding_exon_noncoding_region';
> 
> --- ************************************************
> --- *** relation: vdj_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one VDJ-gene, one J-ge ***
> --- *** ne and one C-gene.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW vdj_j_c_cluster AS
>   SELECT
>     feature_id AS vdj_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VDJ_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: vdj_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one VDJ-gene and one J ***
> --- *** -gene.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW vdj_j_cluster AS
>   SELECT
>     feature_id AS vdj_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VDJ_J_cluster';
> 
> --- ************************************************
> --- *** relation: vj_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one VJ-gene and one C- ***
> --- *** gene.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW vj_c_cluster AS
>   SELECT
>     feature_id AS vj_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VJ_C_cluster';
> 
> --- ************************************************
> --- *** relation: vj_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one VJ-gene, one J-gen ***
> --- *** e and one C-gene.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW vj_j_c_cluster AS
>   SELECT
>     feature_id AS vj_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VJ_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: vj_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one VJ-gene and one J- ***
> --- *** gene.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW vj_j_cluster AS
>   SELECT
>     feature_id AS vj_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VJ_J_cluster';
> 
> --- ************************************************
> --- *** relation: d_gene_recombination_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_gene_recombination_feature AS
>   SELECT
>     feature_id AS d_gene_recombination_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'D_gene_recombination_feature';
> 
> --- ************************************************
> --- *** relation: three_prime_d_heptamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 7 nucleotide recombination site like CAC ***
> --- *** AGTG, part of a 3' D-recombination signa ***
> --- *** l sequence of an immunoglobulin/T-cell r ***
> --- *** eceptor gene.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_d_heptamer AS
>   SELECT
>     feature_id AS three_prime_d_heptamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_D_heptamer';
> 
> --- ************************************************
> --- *** relation: three_prime_d_nonamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A 9 nucleotide recombination site (e.g.  ***
> --- *** ACAAAAACC), part of a 3' D-recombination ***
> --- ***  signal sequence of an immunoglobulin/T- ***
> --- *** cell receptor gene.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_d_nonamer AS
>   SELECT
>     feature_id AS three_prime_d_nonamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_D_nonamer';
> 
> --- ************************************************
> --- *** relation: three_prime_d_spacer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A 12 or 23 nucleotide spacer between the ***
> --- ***  3'D-HEPTAMER and 3'D-NONAMER of a 3'D-R ***
> --- *** S.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_d_spacer AS
>   SELECT
>     feature_id AS three_prime_d_spacer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_D_spacer';
> 
> --- ************************************************
> --- *** relation: five_prime_d_heptamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 7 nucleotide recombination site (e.g. CA ***
> --- *** CTGTG), part of a 5' D-recombination sig ***
> --- *** nal sequence (SO:0000556) of an immunogl ***
> --- *** obulin/T-cell receptor gene.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_d_heptamer AS
>   SELECT
>     feature_id AS five_prime_d_heptamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_D_heptamer';
> 
> --- ************************************************
> --- *** relation: five_prime_d_nonamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 9 nucleotide recombination site (e.g. GG ***
> --- *** TTTTTGT), part of a five_prime_D-recombi ***
> --- *** nation signal sequence (SO:0000556) of a ***
> --- *** n immunoglobulin/T-cell receptor gene.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_d_nonamer AS
>   SELECT
>     feature_id AS five_prime_d_nonamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_D_nonamer';
> 
> --- ************************************************
> --- *** relation: five_prime_d_spacer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 12 or 23 nucleotide spacer between the 5 ***
> --- *** ' D-heptamer (SO:0000496) and 5' D-nonam ***
> --- *** er (SO:0000497) of a 5' D-recombination  ***
> --- *** signal sequence (SO:0000556) of an immun ***
> --- *** oglobulin/T-cell receptor gene.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_d_spacer AS
>   SELECT
>     feature_id AS five_prime_d_spacer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_D_spacer';
> 
> --- ************************************************
> --- *** relation: virtual_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A continuous piece of sequence similar t ***
> --- *** o the 'virtual contig' concept of the En ***
> --- *** sembl database.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW virtual_sequence AS
>   SELECT
>     feature_id AS virtual_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'virtual_sequence';
> 
> --- ************************************************
> --- *** relation: hoogsteen_base_pair ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A type of non-canonical base-pairing. Th ***
> --- *** is is less energetically favourable than ***
> --- ***  watson crick base pairing. Hoogsteen GC ***
> --- ***  base pairs only have two hydrogen bonds ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW hoogsteen_base_pair AS
>   SELECT
>     feature_id AS hoogsteen_base_pair_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'Hoogsteen_base_pair';
> 
> --- ************************************************
> --- *** relation: reverse_hoogsteen_base_pair ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A type of non-canonical base-pairing.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW reverse_hoogsteen_base_pair AS
>   SELECT
>     feature_id AS reverse_hoogsteen_base_pair_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'reverse_Hoogsteen_base_pair';
> 
> --- ************************************************
> --- *** relation: d_dj_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one D-gene, one DJ-gen ***
> --- *** e and one C-gene.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_dj_c_cluster AS
>   SELECT
>     feature_id AS d_dj_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_DJ_C_cluster';
> 
> --- ************************************************
> --- *** relation: d_dj_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one D-gene and one DJ- ***
> --- *** gene.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_dj_cluster AS
>   SELECT
>     feature_id AS d_dj_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_DJ_cluster';
> 
> --- ************************************************
> --- *** relation: d_dj_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one D-gene, one DJ-gen ***
> --- *** e, one J-gene and one C-gene.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_dj_j_c_cluster AS
>   SELECT
>     feature_id AS d_dj_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_DJ_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: pseudogenic_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non functional descendant of an exon,  ***
> --- *** part of a pseudogene.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudogenic_exon AS
>   SELECT
>     feature_id AS pseudogenic_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pseudogenic_exon';
> 
> --- ************************************************
> --- *** relation: d_dj_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one D-gene, one DJ-gen ***
> --- *** e, and one J-gene.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_dj_j_cluster AS
>   SELECT
>     feature_id AS d_dj_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_DJ_J_cluster';
> 
> --- ************************************************
> --- *** relation: d_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding at least one D-gene, one J-gene a ***
> --- *** nd one C-gene.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_j_c_cluster AS
>   SELECT
>     feature_id AS d_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: vd_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in partially rearranged genom ***
> --- *** ic DNA including L-part1, V-intron and V ***
> --- *** -D-exon, with the 5' UTR (SO:0000204) an ***
> --- *** d 3' UTR (SO:0000205).                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW vd_gene AS
>   SELECT
>     feature_id AS vd_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VD_gene';
> 
> --- ************************************************
> --- *** relation: j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding at least one J-gene and one C-gen ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW j_c_cluster AS
>   SELECT
>     feature_id AS j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'J_C_cluster';
> 
> --- ************************************************
> --- *** relation: inversion_derived_deficiency_plus_aneuploid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome generated by recombination  ***
> --- *** between two inversions; has a deficiency ***
> --- ***  at one end and presumed to have a defic ***
> --- *** iency or duplication at the other end of ***
> --- ***  the inversion.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_derived_deficiency_plus_aneuploid AS
>   SELECT
>     feature_id AS inversion_derived_deficiency_plus_aneuploid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_derived_deficiency_plus_aneuploid';
> 
> --- ************************************************
> --- *** relation: j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding more than one J-gene.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW j_cluster AS
>   SELECT
>     feature_id AS j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'J_cluster';
> 
> --- ************************************************
> --- *** relation: j_nonamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 9 nucleotide recombination site (e.g. GG ***
> --- *** TTTTTGT), part of a J-gene recombination ***
> --- ***  feature of an immunoglobulin/T-cell rec ***
> --- *** eptor gene.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW j_nonamer AS
>   SELECT
>     feature_id AS j_nonamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'J_nonamer';
> 
> --- ************************************************
> --- *** relation: j_heptamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 7 nucleotide recombination site (e.g. CA ***
> --- *** CAGTG), part of a J-gene recombination f ***
> --- *** eature of an immunoglobulin/T-cell recep ***
> --- *** tor gene.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW j_heptamer AS
>   SELECT
>     feature_id AS j_heptamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'J_heptamer';
> 
> --- ************************************************
> --- *** relation: pseudogenic_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non functional descendant of a transcr ***
> --- *** ipt, part of a pseudogene.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudogenic_transcript AS
>   SELECT
>     feature_id AS pseudogenic_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pseudogenic_transcript';
> 
> --- ************************************************
> --- *** relation: j_spacer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 12 or 23 nucleotide spacer between the J ***
> --- *** -nonamer and the J-heptamer of a J-gene  ***
> --- *** recombination feature of an immunoglobul ***
> --- *** in/T-cell receptor gene.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW j_spacer AS
>   SELECT
>     feature_id AS j_spacer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'J_spacer';
> 
> --- ************************************************
> --- *** relation: v_dj_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene and one DJ- ***
> --- *** gene.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_dj_cluster AS
>   SELECT
>     feature_id AS v_dj_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_DJ_cluster';
> 
> --- ************************************************
> --- *** relation: v_dj_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one DJ-gen ***
> --- *** e and one J-gene.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_dj_j_cluster AS
>   SELECT
>     feature_id AS v_dj_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_DJ_J_cluster';
> 
> --- ************************************************
> --- *** relation: v_vdj_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one VDJ-ge ***
> --- *** ne and one C-gene.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_vdj_c_cluster AS
>   SELECT
>     feature_id AS v_vdj_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_VDJ_C_cluster';
> 
> --- ************************************************
> --- *** relation: v_vdj_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene and one VDJ ***
> --- *** -gene.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_vdj_cluster AS
>   SELECT
>     feature_id AS v_vdj_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_VDJ_cluster';
> 
> --- ************************************************
> --- *** relation: v_vdj_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one VDJ-ge ***
> --- *** ne and one J-gene.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_vdj_j_cluster AS
>   SELECT
>     feature_id AS v_vdj_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_VDJ_J_cluster';
> 
> --- ************************************************
> --- *** relation: v_vj_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one VJ-gen ***
> --- *** e and one C-gene.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_vj_c_cluster AS
>   SELECT
>     feature_id AS v_vj_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_VJ_C_cluster';
> 
> --- ************************************************
> --- *** relation: v_vj_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene and one VJ- ***
> --- *** gene.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_vj_cluster AS
>   SELECT
>     feature_id AS v_vj_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_VJ_cluster';
> 
> --- ************************************************
> --- *** relation: v_vj_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one VJ-gen ***
> --- *** e and one J-gene.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_vj_j_cluster AS
>   SELECT
>     feature_id AS v_vj_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_VJ_J_cluster';
> 
> --- ************************************************
> --- *** relation: v_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding more than one V-gene.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_cluster AS
>   SELECT
>     feature_id AS v_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_cluster';
> 
> --- ************************************************
> --- *** relation: v_d_dj_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one D-gene ***
> --- *** , one DJ-gene and one C-gene.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_d_dj_c_cluster AS
>   SELECT
>     feature_id AS v_d_dj_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_D_DJ_C_cluster';
> 
> --- ************************************************
> --- *** relation: v_d_dj_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one D-gene ***
> --- *** , one DJ-gene.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_d_dj_cluster AS
>   SELECT
>     feature_id AS v_d_dj_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_D_DJ_cluster';
> 
> --- ************************************************
> --- *** relation: v_d_dj_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one D-gene ***
> --- *** , one DJ-gene, one J-gene and one C-gene ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_d_dj_j_c_cluster AS
>   SELECT
>     feature_id AS v_d_dj_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_D_DJ_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: v_d_dj_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one D-gene ***
> --- *** , one DJ-gene and one J-gene.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_d_dj_j_cluster AS
>   SELECT
>     feature_id AS v_d_dj_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_D_DJ_J_cluster';
> 
> --- ************************************************
> --- *** relation: v_d_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding at least one V-gene, one D-gene a ***
> --- *** nd one J-gene and one C-gene.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_d_j_c_cluster AS
>   SELECT
>     feature_id AS v_d_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_D_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: v_d_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding at least one V-gene, one D-gene a ***
> --- *** nd one J-gene.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_d_j_cluster AS
>   SELECT
>     feature_id AS v_d_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_D_J_cluster';
> 
> --- ************************************************
> --- *** relation: v_heptamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 7 nucleotide recombination site (e.g. CA ***
> --- *** CAGTG), part of V-gene recombination fea ***
> --- *** ture of an immunoglobulin/T-cell recepto ***
> --- *** r gene.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_heptamer AS
>   SELECT
>     feature_id AS v_heptamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_heptamer';
> 
> --- ************************************************
> --- *** relation: v_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding at least one V-gene and one J-gen ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_j_cluster AS
>   SELECT
>     feature_id AS v_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_J_cluster';
> 
> --- ************************************************
> --- *** relation: v_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding at least one V-gene, one J-gene a ***
> --- *** nd one C-gene.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_j_c_cluster AS
>   SELECT
>     feature_id AS v_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: v_nonamer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 9 nucleotide recombination site (e.g. AC ***
> --- *** AAAAACC), part of V-gene recombination f ***
> --- *** eature of an immunoglobulin/T-cell recep ***
> --- *** tor gene.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_nonamer AS
>   SELECT
>     feature_id AS v_nonamer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_nonamer';
> 
> --- ************************************************
> --- *** relation: v_spacer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 12 or 23 nucleotide spacer between the V ***
> --- *** -heptamer and the V-nonamer of a V-gene  ***
> --- *** recombination feature of an immunoglobul ***
> --- *** in/T-cell receptor gene.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_spacer AS
>   SELECT
>     feature_id AS v_spacer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_spacer';
> 
> --- ************************************************
> --- *** relation: v_gene_recombination_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Recombination signal including V-heptame ***
> --- *** r, V-spacer and V-nonamer in 3' of V-reg ***
> --- *** ion of a V-gene or V-sequence of an immu ***
> --- *** noglobulin/T-cell receptor gene.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_gene_recombination_feature AS
>   SELECT
>     feature_id AS v_gene_recombination_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_gene_recombination_feature';
> 
> --- ************************************************
> --- *** relation: dj_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one DJ-gene and one C- ***
> --- *** gene.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW dj_c_cluster AS
>   SELECT
>     feature_id AS dj_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DJ_C_cluster';
> 
> --- ************************************************
> --- *** relation: dj_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA in rearranged configuration  ***
> --- *** including at least one D-J-GENE, one J-G ***
> --- *** ENE and one C-GENE.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW dj_j_c_cluster AS
>   SELECT
>     feature_id AS dj_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DJ_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: vdj_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one VDJ-gene and one C ***
> --- *** -gene.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW vdj_c_cluster AS
>   SELECT
>     feature_id AS vdj_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VDJ_C_cluster';
> 
> --- ************************************************
> --- *** relation: v_dj_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one DJ-gen ***
> --- *** e and one C-gene.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_dj_c_cluster AS
>   SELECT
>     feature_id AS v_dj_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_DJ_C_cluster';
> 
> --- ************************************************
> --- *** relation: helitron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A rolling circle transposon. Autonomous  ***
> --- *** helitrons encode a 5'-to-3' DNA helicase ***
> --- ***  and nuclease/ligase similar to those en ***
> --- *** coded by known rolling-circle replicons. ***
> --- ************************************************
> ---
> 
> CREATE VIEW helitron AS
>   SELECT
>     feature_id AS helitron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'helitron';
> 
> --- ************************************************
> --- *** relation: recoding_pseudoknot ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The pseudoknots involved in recoding are ***
> --- ***  unique in that, as they play their role ***
> --- ***  as a structure, they are immediately un ***
> --- *** folded and their now linear sequence ser ***
> --- *** ves as a template for decoding.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW recoding_pseudoknot AS
>   SELECT
>     feature_id AS recoding_pseudoknot_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recoding_pseudoknot';
> 
> --- ************************************************
> --- *** relation: designed_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW designed_sequence AS
>   SELECT
>     feature_id AS designed_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'designed_sequence';
> 
> --- ************************************************
> --- *** relation: inversion_derived_bipartite_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome generated by recombination  ***
> --- *** between two inversions; there is a dupli ***
> --- *** cation at each end of the inversion.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_derived_bipartite_duplication AS
>   SELECT
>     feature_id AS inversion_derived_bipartite_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_derived_bipartite_duplication';
> 
> --- ************************************************
> --- *** relation: gene_with_edited_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes a transcript that is ***
> --- ***  edited.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_edited_transcript AS
>   SELECT
>     feature_id AS gene_with_edited_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_edited_transcript';
> 
> --- ************************************************
> --- *** relation: inversion_derived_duplication_plus_aneuploid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome generated by recombination  ***
> --- *** between two inversions; has a duplicatio ***
> --- *** n at one end and presumed to have a defi ***
> --- *** ciency or duplication at the other end o ***
> --- *** f the inversion.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_derived_duplication_plus_aneuploid AS
>   SELECT
>     feature_id AS inversion_derived_duplication_plus_aneuploid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_derived_duplication_plus_aneuploid';
> 
> --- ************************************************
> --- *** relation: aneuploid_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW aneuploid_chromosome AS
>   SELECT
>     feature_id AS aneuploid_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_derived_aneuploid_chromosome' OR cvterm.name = 'chromosomal_deletion' OR cvterm.name = 'chromosomal_duplication' OR cvterm.name = 'inversion_derived_bipartite_deficiency' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_aneuploid' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'interchromosomal_duplication' OR cvterm.name = 'intrachromosomal_duplication' OR cvterm.name = 'free_duplication' OR cvterm.name = 'insertional_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_bipartite_duplication' OR cvterm.name = 'inversion_derived_duplication_plus_aneuploid' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'tandem_duplication' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'direct_tandem_duplication' OR cvterm.name = 'inverted_tandem_duplication' OR cvterm.name = 'free_ring_duplication' OR cvterm.name = 'uninverted_insertional_duplication' OR cvterm.name = 'inverted_insertional_duplication' OR cvterm.name = 'unoriented_insertional_duplication' OR cvterm.name = 'aneuploid_chromosome';
> 
> --- ************************************************
> --- *** relation: polya_signal_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The recognition sequence necessary for e ***
> --- *** ndonuclease cleavage of an RNA transcrip ***
> --- *** t that is followed by polyadenylation; c ***
> --- *** onsensus=AATAAA.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW polya_signal_sequence AS
>   SELECT
>     feature_id AS polya_signal_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polyA_signal_sequence';
> 
> --- ************************************************
> --- *** relation: shine_dalgarno_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Region in 5' UTR where ribosome assemble ***
> --- *** s on mRNA.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW shine_dalgarno_sequence AS
>   SELECT
>     feature_id AS shine_dalgarno_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'Shine_Dalgarno_sequence';
> 
> --- ************************************************
> --- *** relation: polya_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The site on an RNA transcript to which w ***
> --- *** ill be added adenine residues by post-tr ***
> --- *** anscriptional polyadenylation.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW polya_site AS
>   SELECT
>     feature_id AS polya_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polyA_site';
> 
> --- ************************************************
> --- *** relation: five_prime_clip ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5' most region of a precursor transcript ***
> --- ***  that is clipped off during processing.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_clip AS
>   SELECT
>     feature_id AS five_prime_clip_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_clip';
> 
> --- ************************************************
> --- *** relation: five_prime_d_recombination_signal_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Recombination signal of an immunoglobuli ***
> --- *** n/T-cell receptor gene, including the 5' ***
> --- ***  D-nonamer (SO:0000497), 5' D-spacer (SO ***
> --- *** :0000498), and 5' D-heptamer (SO:0000396 ***
> --- *** ) in 5' of the D-region of a D-gene, or  ***
> --- *** in 5' of the D-region of DJ-gene.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_d_recombination_signal_sequence AS
>   SELECT
>     feature_id AS five_prime_d_recombination_signal_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_D_recombination_signal_sequence';
> 
> --- ************************************************
> --- *** relation: three_prime_clip ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 3'-most region of a precursor transcript ***
> --- ***  that is clipped off during processing.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_clip AS
>   SELECT
>     feature_id AS three_prime_clip_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_clip';
> 
> --- ************************************************
> --- *** relation: c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene including more than one C-gen ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_cluster AS
>   SELECT
>     feature_id AS c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_cluster';
> 
> --- ************************************************
> --- *** relation: d_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding more than one D-gene.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_cluster AS
>   SELECT
>     feature_id AS d_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_cluster';
> 
> --- ************************************************
> --- *** relation: d_j_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in germline configuration inc ***
> --- *** luding at least one D-gene and one J-gen ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW d_j_cluster AS
>   SELECT
>     feature_id AS d_j_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'D_J_cluster';
> 
> --- ************************************************
> --- *** relation: heptamer_of_recombination_feature_of_vertebrate_im_sys_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Seven nucleotide recombination site (e.g ***
> --- *** . CACAGTG), part of V-gene, D-gene or J- ***
> --- *** gene recombination feature of an immunog ***
> --- *** lobulin or T-cell receptor gene.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW heptamer_of_recombination_feature_of_vertebrate_im_sys_gene AS
>   SELECT
>     feature_id AS heptamer_of_recombination_feature_of_vertebrate_im_sys_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene';
> 
> --- ************************************************
> --- *** relation: nonamer_of_recombination_feature_of_vertebrate_im_sys_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW nonamer_of_recombination_feature_of_vertebrate_im_sys_gene AS
>   SELECT
>     feature_id AS nonamer_of_recombination_feature_of_vertebrate_im_sys_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene';
> 
> --- ************************************************
> --- *** relation: vertebrate_immune_system_gene_recombination_spacer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW vertebrate_immune_system_gene_recombination_spacer AS
>   SELECT
>     feature_id AS vertebrate_immune_system_gene_recombination_spacer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_D_spacer' OR cvterm.name = 'five_prime_D_spacer' OR cvterm.name = 'J_spacer' OR cvterm.name = 'V_spacer' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_spacer';
> 
> --- ************************************************
> --- *** relation: v_dj_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one DJ-gen ***
> --- *** e, one J-gene and one C-gene.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_dj_j_c_cluster AS
>   SELECT
>     feature_id AS v_dj_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_DJ_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: v_vdj_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one VDJ-ge ***
> --- *** ne, one J-gene and one C-gene.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_vdj_j_c_cluster AS
>   SELECT
>     feature_id AS v_vdj_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_VDJ_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: v_vj_j_c_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in rearranged configuration i ***
> --- *** ncluding at least one V-gene, one VJ-gen ***
> --- *** e, one J-gene and one C-gene.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW v_vj_j_c_cluster AS
>   SELECT
>     feature_id AS v_vj_j_c_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'V_VJ_J_C_cluster';
> 
> --- ************************************************
> --- *** relation: inversion_derived_aneuploid_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome may be generated by recombi ***
> --- *** nation between two inverversions; presum ***
> --- *** ed to have a deficiency or duplication a ***
> --- *** t each end of the inversion.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_derived_aneuploid_chromosome AS
>   SELECT
>     feature_id AS inversion_derived_aneuploid_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_derived_aneuploid_chromosome';
> 
> --- ************************************************
> --- *** relation: bidirectional_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW bidirectional_promoter AS
>   SELECT
>     feature_id AS bidirectional_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'bidirectional_promoter';
> 
> --- ************************************************
> --- *** relation: retrotransposed ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute of a feature that occured a ***
> --- *** s the product of a reverse transcriptase ***
> --- ***  mediated event.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW retrotransposed AS
>   SELECT
>     feature_id AS retrotransposed_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'retrotransposed';
> 
> --- ************************************************
> --- *** relation: three_prime_d_recombination_signal_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Recombination signal of an immunoglobuli ***
> --- *** n/T-cell receptor gene, including the 3' ***
> --- ***  D-heptamer (SO:0000493), 3' D-spacer, a ***
> --- *** nd 3' D-nonamer (SO:0000494) in 3' of th ***
> --- *** e D-region of a D-gene.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_d_recombination_signal_sequence AS
>   SELECT
>     feature_id AS three_prime_d_recombination_signal_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_D_recombination_signal_sequence';
> 
> --- ************************************************
> --- *** relation: mirna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirna_encoding AS
>   SELECT
>     feature_id AS mirna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'miRNA_encoding';
> 
> --- ************************************************
> --- *** relation: dj_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic DNA of immunoglobulin/T-cell rec ***
> --- *** eptor gene in partially rearranged genom ***
> --- *** ic DNA including D-J-region with 5' UTR  ***
> --- *** and 3' UTR, also designated as D-J-segme ***
> --- *** nt.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW dj_gene AS
>   SELECT
>     feature_id AS dj_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DJ_gene';
> 
> --- ************************************************
> --- *** relation: rrna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_encoding AS
>   SELECT
>     feature_id AS rrna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_encoding';
> 
> --- ************************************************
> --- *** relation: vdj_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Rearranged genomic DNA of immunoglobulin ***
> --- *** /T-cell receptor gene including L-part1, ***
> --- ***  V-intron and V-D-J-exon, with the 5'UTR ***
> --- ***  (SO:0000204) and 3'UTR (SO:0000205).    ***
> --- ************************************************
> ---
> 
> CREATE VIEW vdj_gene AS
>   SELECT
>     feature_id AS vdj_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VDJ_gene';
> 
> --- ************************************************
> --- *** relation: scrna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW scrna_encoding AS
>   SELECT
>     feature_id AS scrna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'scRNA_encoding';
> 
> --- ************************************************
> --- *** relation: vj_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Rearranged genomic DNA of immunoglobulin ***
> --- *** /T-cell receptor gene including L-part1, ***
> --- ***  V-intron and V-J-exon, with the 5'UTR ( ***
> --- *** SO:0000204) and 3'UTR (SO:0000205).      ***
> --- ************************************************
> ---
> 
> CREATE VIEW vj_gene AS
>   SELECT
>     feature_id AS vj_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VJ_gene';
> 
> --- ************************************************
> --- *** relation: centromere ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of chromosome where the spindle ***
> --- ***  fibers attach during mitosis and meiosi ***
> --- *** s.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW centromere AS
>   SELECT
>     feature_id AS centromere_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'centromere';
> 
> --- ************************************************
> --- *** relation: snorna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW snorna_encoding AS
>   SELECT
>     feature_id AS snorna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_D_box_snoRNA_encoding' OR cvterm.name = 'H_ACA_box_snoRNA_encoding' OR cvterm.name = 'snoRNA_encoding';
> 
> --- ************************************************
> --- *** relation: edited_transcript_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A locatable feature on a transcript that ***
> --- ***  is edited.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW edited_transcript_feature AS
>   SELECT
>     feature_id AS edited_transcript_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pre_edited_region' OR cvterm.name = 'editing_block' OR cvterm.name = 'editing_domain' OR cvterm.name = 'unedited_region' OR cvterm.name = 'edited_transcript_feature';
> 
> --- ************************************************
> --- *** relation: methylation_guide_snorna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a methylat ***
> --- *** ion guide small nucleolar RNA.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW methylation_guide_snorna_primary_transcript AS
>   SELECT
>     feature_id AS methylation_guide_snorna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylation_guide_snoRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: cap ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A structure consisting of a 7-methylguan ***
> --- *** osine in 5'-5' triphosphate linkage with ***
> --- ***  the first nucleotide of an mRNA. It is  ***
> --- *** added post-transcriptionally, and is not ***
> --- ***  encoded in the DNA.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW cap AS
>   SELECT
>     feature_id AS cap_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cap';
> 
> --- ************************************************
> --- *** relation: rrna_cleavage_snorna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding an rRNA cl ***
> --- *** eavage snoRNA.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_cleavage_snorna_primary_transcript AS
>   SELECT
>     feature_id AS rrna_cleavage_snorna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_cleavage_snoRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: pre_edited_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of a transcript that will be  ***
> --- *** edited.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW pre_edited_region AS
>   SELECT
>     feature_id AS pre_edited_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pre_edited_region';
> 
> --- ************************************************
> --- *** relation: tmrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tmRNA liberates a mRNA from a stalled  ***
> --- *** ribosome. To accomplish this part of the ***
> --- ***  tmRNA is used as a reading frame that e ***
> --- *** nds in a translation stop signal. The br ***
> --- *** oken mRNA is replaced in the ribosome by ***
> --- ***  the tmRNA and translation of the tmRNA  ***
> --- *** leads to addition of a proteolysis tag t ***
> --- *** o the incomplete protein enabling recogn ***
> --- *** ition by a protease. Recently a number o ***
> --- *** f permuted tmRNAs genes have been found  ***
> --- *** encoded in two parts. TmRNAs have been i ***
> --- *** dentified in eubacteria and some chlorop ***
> --- *** lasts but are absent from archeal and eu ***
> --- *** karyote nuclear genomes.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW tmrna AS
>   SELECT
>     feature_id AS tmrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tmRNA';
> 
> --- ************************************************
> --- *** relation: c_d_box_snorna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_d_box_snorna_encoding AS
>   SELECT
>     feature_id AS c_d_box_snorna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_D_box_snoRNA_encoding';
> 
> --- ************************************************
> --- *** relation: tmrna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a tmRNA (S ***
> --- *** O:0000584).                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW tmrna_primary_transcript AS
>   SELECT
>     feature_id AS tmrna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tmRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: group_i_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Group I catalytic introns are large self ***
> --- *** -splicing ribozymes. They catalyse their ***
> --- ***  own excision from mRNA, tRNA and rRNA p ***
> --- *** recursors in a wide range of organisms.  ***
> --- *** The core secondary structure consists of ***
> --- ***  9 paired regions (P1-P9). These fold to ***
> --- ***  essentially two domains, the P4-P6 doma ***
> --- *** in (formed from the stacking of P5, P4,  ***
> --- *** P6 and P6a helices) and the P3-P9 domain ***
> --- ***  (formed from the P8, P3, P7 and P9 heli ***
> --- *** ces). Group I catalytic introns often ha ***
> --- *** ve long ORFs inserted in loop regions.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW group_i_intron AS
>   SELECT
>     feature_id AS group_i_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'group_I_intron';
> 
> --- ************************************************
> --- *** relation: autocatalytically_spliced_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A self spliced intron.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW autocatalytically_spliced_intron AS
>   SELECT
>     feature_id AS autocatalytically_spliced_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'group_I_intron' OR cvterm.name = 'group_II_intron' OR cvterm.name = 'group_III_intron' OR cvterm.name = 'group_IIA_intron' OR cvterm.name = 'group_IIB_intron' OR cvterm.name = 'autocatalytically_spliced_intron';
> 
> --- ************************************************
> --- *** relation: srp_rna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a signal r ***
> --- *** ecognition particle RNA.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW srp_rna_primary_transcript AS
>   SELECT
>     feature_id AS srp_rna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SRP_RNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: srp_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The signal recognition particle (SRP) is ***
> --- ***  a universally conserved ribonucleoprote ***
> --- *** in. It is involved in the co-translation ***
> --- *** al targeting of proteins to membranes. T ***
> --- *** he eukaryotic SRP consists of a 300-nucl ***
> --- *** eotide 7S RNA and six proteins: SRPs 72, ***
> --- ***  68, 54, 19, 14, and 9. Archaeal SRP con ***
> --- *** sists of a 7S RNA and homologues of the  ***
> --- *** eukaryotic SRP19 and SRP54 proteins. In  ***
> --- *** most eubacteria, the SRP consists of a 4 ***
> --- *** .5S RNA and the Ffh protein (a homologue ***
> --- ***  of the eukaryotic SRP54 protein). Eukar ***
> --- *** yotic and archaeal 7S RNAs have very sim ***
> --- *** ilar secondary structures, with eight he ***
> --- *** lical elements. These fold into the Alu  ***
> --- *** and S domains, separated by a long linke ***
> --- *** r region. Eubacterial SRP is generally a ***
> --- ***  simpler structure, with the M domain of ***
> --- ***  Ffh bound to a region of the 4.5S RNA t ***
> --- *** hat corresponds to helix 8 of the eukary ***
> --- *** otic and archaeal SRP S domain. Some Gra ***
> --- *** m-positive bacteria (e.g. Bacillus subti ***
> --- *** lis), however, have a larger SRP RNA tha ***
> --- *** t also has an Alu domain. The Alu domain ***
> --- ***  is thought to mediate the peptide chain ***
> --- ***  elongation retardation function of the  ***
> --- *** SRP. The universally conserved helix whi ***
> --- *** ch interacts with the SRP54/Ffh M domain ***
> --- ***  mediates signal sequence recognition. I ***
> --- *** n eukaryotes and archaea, the SRP19-heli ***
> --- *** x 6 complex is thought to be involved in ***
> --- ***  SRP assembly and stabilizes helix 8 for ***
> --- ***  SRP54 binding.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW srp_rna AS
>   SELECT
>     feature_id AS srp_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SRP_RNA';
> 
> --- ************************************************
> --- *** relation: pseudoknot ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tertiary structure in RNA where nucleo ***
> --- *** tides in a loop form base pairs with a r ***
> --- *** egion of RNA downstream of the loop.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudoknot AS
>   SELECT
>     feature_id AS pseudoknot_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recoding_pseudoknot' OR cvterm.name = 'H_pseudoknot' OR cvterm.name = 'pseudoknot';
> 
> --- ************************************************
> --- *** relation: h_pseudoknot ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A pseudoknot which contains two stems an ***
> --- *** d at least two loops.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW h_pseudoknot AS
>   SELECT
>     feature_id AS h_pseudoknot_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'H_pseudoknot';
> 
> --- ************************************************
> --- *** relation: c_d_box_snorna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Most box C/D snoRNAs also contain long ( ***
> --- *** >10 nt) sequences complementary to rRNA. ***
> --- ***  Boxes C and D, as well as boxes C' and  ***
> --- *** D', are usually located in close proximi ***
> --- *** ty, and form a structure known as the bo ***
> --- *** x C/D motif. This motif is important for ***
> --- ***  snoRNA stability, processing, nucleolar ***
> --- ***  targeting and function. A small number  ***
> --- *** of box C/D snoRNAs are involved in rRNA  ***
> --- *** processing; most, however, are known or  ***
> --- *** predicted to serve as guide RNAs in ribo ***
> --- *** se methylation of rRNA. Targeting involv ***
> --- *** es direct base pairing of the snoRNA at  ***
> --- *** the rRNA site to be modified and selecti ***
> --- *** on of a rRNA nucleotide a fixed distance ***
> --- ***  from box D or D'.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_d_box_snorna AS
>   SELECT
>     feature_id AS c_d_box_snorna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U14_snoRNA' OR cvterm.name = 'U3_snoRNA' OR cvterm.name = 'methylation_guide_snoRNA' OR cvterm.name = 'C_D_box_snoRNA';
> 
> --- ************************************************
> --- *** relation: h_aca_box_snorna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Members of the box H/ACA family contain  ***
> --- *** an ACA triplet, exactly 3 nt upstream fr ***
> --- *** om the 3' end and an H-box in a hinge re ***
> --- *** gion that links two structurally similar ***
> --- ***  functional domains of the molecule. Bot ***
> --- *** h boxes are important for snoRNA biosynt ***
> --- *** hesis and function. A few box H/ACA snoR ***
> --- *** NAs are involved in rRNA processing; mos ***
> --- *** t others are known or predicted to parti ***
> --- *** cipate in selection of uridine nucleosid ***
> --- *** es in rRNA to be converted to pseudourid ***
> --- *** ines. Site selection is mediated by dire ***
> --- *** ct base pairing of the snoRNA with rRNA  ***
> --- *** through one or both targeting domains.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW h_aca_box_snorna AS
>   SELECT
>     feature_id AS h_aca_box_snorna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pseudouridylation_guide_snoRNA' OR cvterm.name = 'H_ACA_box_snoRNA';
> 
> --- ************************************************
> --- *** relation: c_d_box_snorna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a small nu ***
> --- *** cleolar RNA of the box C/D family.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_d_box_snorna_primary_transcript AS
>   SELECT
>     feature_id AS c_d_box_snorna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_D_box_snoRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: h_aca_box_snorna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a small nu ***
> --- *** cleolar RNA of the box H/ACA family.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW h_aca_box_snorna_primary_transcript AS
>   SELECT
>     feature_id AS h_aca_box_snorna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'H_ACA_box_snoRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: guide_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A short 3'-uridylated RNA that can form  ***
> --- *** a duplex (except for its post-transcript ***
> --- *** ionally added oligo_U tail (SO:0000609)) ***
> --- ***  with a stretch of mature edited mRNA.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW guide_rna AS
>   SELECT
>     feature_id AS guide_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'guide_RNA';
> 
> --- ************************************************
> --- *** relation: group_ii_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Group II introns are found in rRNA, tRNA ***
> --- ***  and mRNA of organelles in fungi, plants ***
> --- ***  and protists, and also in mRNA in bacte ***
> --- *** ria. They are large self-splicing ribozy ***
> --- *** mes and have 6 structural domains (usual ***
> --- *** ly designated dI to dVI). A subset of gr ***
> --- *** oup II introns also encode essential spl ***
> --- *** icing proteins in intronic ORFs. The len ***
> --- *** gth of these introns can therefore be up ***
> --- ***  to 3kb. Splicing occurs in almost ident ***
> --- *** ical fashion to nuclear pre-mRNA splicin ***
> --- *** g with two transesterification steps. Th ***
> --- *** e 2' hydroxyl of a bulged adenosine in d ***
> --- *** omain VI attacks the 5' splice site, fol ***
> --- *** lowed by nucleophilic attack on the 3' s ***
> --- *** plice site by the 3' OH of the upstream  ***
> --- *** exon. Protein machinery is required for  ***
> --- *** splicing in vivo, and long range intron- ***
> --- *** intron and intron-exon interactions are  ***
> --- *** important for splice site positioning. G ***
> --- *** roup II introns are further sub-classifi ***
> --- *** ed into groups IIA and IIB which differ  ***
> --- *** in splice site consensus, distance of bu ***
> --- *** lged A from 3' splice site, some tertiar ***
> --- *** y interactions, and intronic ORF phyloge ***
> --- *** ny.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW group_ii_intron AS
>   SELECT
>     feature_id AS group_ii_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'group_IIA_intron' OR cvterm.name = 'group_IIB_intron' OR cvterm.name = 'group_II_intron';
> 
> --- ************************************************
> --- *** relation: editing_block ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Edited mRNA sequence mediated by a singl ***
> --- *** e guide RNA (SO:0000602).                ***
> --- ************************************************
> ---
> 
> CREATE VIEW editing_block AS
>   SELECT
>     feature_id AS editing_block_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'editing_block';
> 
> --- ************************************************
> --- *** relation: intergenic_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region containing or overlapping no ge ***
> --- *** nes that is bounded on either side by a  ***
> --- *** gene, or bounded by a gene and the end o ***
> --- *** f the chromosome.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW intergenic_region AS
>   SELECT
>     feature_id AS intergenic_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intergenic_region';
> 
> --- ************************************************
> --- *** relation: editing_domain ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Edited mRNA sequence mediated by two or  ***
> --- *** more overlapping guide RNAs (SO:0000602) ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW editing_domain AS
>   SELECT
>     feature_id AS editing_domain_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'editing_domain';
> 
> --- ************************************************
> --- *** relation: unedited_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of an edited transcript that  ***
> --- *** will not be edited.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW unedited_region AS
>   SELECT
>     feature_id AS unedited_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'unedited_region';
> 
> --- ************************************************
> --- *** relation: h_aca_box_snorna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW h_aca_box_snorna_encoding AS
>   SELECT
>     feature_id AS h_aca_box_snorna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'H_ACA_box_snoRNA_encoding';
> 
> --- ************************************************
> --- *** relation: oligo_u_tail ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The string of non-encoded U's at the 3'  ***
> --- *** end of a guide RNA (SO:0000602).         ***
> --- ************************************************
> ---
> 
> CREATE VIEW oligo_u_tail AS
>   SELECT
>     feature_id AS oligo_u_tail_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'oligo_U_tail';
> 
> --- ************************************************
> --- *** relation: polya_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Sequence of about 100 nucleotides of A a ***
> --- *** dded to the 3' end of most eukaryotic mR ***
> --- *** NAs.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW polya_sequence AS
>   SELECT
>     feature_id AS polya_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polyA_sequence';
> 
> --- ************************************************
> --- *** relation: branch_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A pyrimidine rich sequence near the 3' e ***
> --- *** nd of an intron to which the 5'end becom ***
> --- *** es covalently bound during nuclear splic ***
> --- *** ing. The resulting structure resembles a ***
> --- ***  lariat.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW branch_site AS
>   SELECT
>     feature_id AS branch_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'branch_site';
> 
> --- ************************************************
> --- *** relation: polypyrimidine_tract ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The polypyrimidine tract is one of the c ***
> --- *** is-acting sequence elements directing in ***
> --- *** tron removal in pre-mRNA splicing.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypyrimidine_tract AS
>   SELECT
>     feature_id AS polypyrimidine_tract_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypyrimidine_tract';
> 
> --- ************************************************
> --- *** relation: bacterial_rnapol_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA sequence to which bacterial RNA po ***
> --- *** lymerase binds, to begin transcription.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW bacterial_rnapol_promoter AS
>   SELECT
>     feature_id AS bacterial_rnapol_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'bacterial_RNApol_promoter';
> 
> --- ************************************************
> --- *** relation: bacterial_terminator ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A terminator signal for bacterial transc ***
> --- *** ription.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW bacterial_terminator AS
>   SELECT
>     feature_id AS bacterial_terminator_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'bacterial_terminator';
> 
> --- ************************************************
> --- *** relation: terminator_of_type_2_rnapol_iii_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A terminator signal for RNA polymerase I ***
> --- *** II transcription.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW terminator_of_type_2_rnapol_iii_promoter AS
>   SELECT
>     feature_id AS terminator_of_type_2_rnapol_iii_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'terminator_of_type_2_RNApol_III_promoter';
> 
> --- ************************************************
> --- *** relation: transcription_end_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The base where transcription ends.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcription_end_site AS
>   SELECT
>     feature_id AS transcription_end_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcription_end_site';
> 
> --- ************************************************
> --- *** relation: rnapol_iii_promoter_type_1 ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW rnapol_iii_promoter_type_1 AS
>   SELECT
>     feature_id AS rnapol_iii_promoter_type_1_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNApol_III_promoter_type_1';
> 
> --- ************************************************
> --- *** relation: rnapol_iii_promoter_type_2 ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW rnapol_iii_promoter_type_2 AS
>   SELECT
>     feature_id AS rnapol_iii_promoter_type_2_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNApol_III_promoter_type_2';
> 
> --- ************************************************
> --- *** relation: a_box ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A variably distant linear promoter regio ***
> --- *** n recognised by TFIIIC, with consensus s ***
> --- *** equence TGGCnnAGTGG.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW a_box AS
>   SELECT
>     feature_id AS a_box_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'A_box';
> 
> --- ************************************************
> --- *** relation: b_box ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A variably distant linear promoter regio ***
> --- *** n recognised by TFIIIC, with consensus s ***
> --- *** equence AGGTTCCAnnCC.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW b_box AS
>   SELECT
>     feature_id AS b_box_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'B_box';
> 
> --- ************************************************
> --- *** relation: rnapol_iii_promoter_type_3 ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW rnapol_iii_promoter_type_3 AS
>   SELECT
>     feature_id AS rnapol_iii_promoter_type_3_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNApol_III_promoter_type_3';
> 
> --- ************************************************
> --- *** relation: c_box ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An RNA polymerase III type 1 promoter wi ***
> --- *** th consensus sequence CAnnCCn.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_box AS
>   SELECT
>     feature_id AS c_box_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_box';
> 
> --- ************************************************
> --- *** relation: snrna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW snrna_encoding AS
>   SELECT
>     feature_id AS snrna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'snRNA_encoding';
> 
> --- ************************************************
> --- *** relation: telomere ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A specific structure at the end of a lin ***
> --- *** ear chromosome, required for the integri ***
> --- *** ty and maintenance of the end.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW telomere AS
>   SELECT
>     feature_id AS telomere_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'telomere';
> 
> --- ************************************************
> --- *** relation: silencer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A regulatory region which upon binding o ***
> --- *** f transcription factors, suppress the tr ***
> --- *** anscription of the gene or genes they co ***
> --- *** ntrol.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW silencer AS
>   SELECT
>     feature_id AS silencer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'silencer';
> 
> --- ************************************************
> --- *** relation: chromosomal_regulatory_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosomal_regulatory_element AS
>   SELECT
>     feature_id AS chromosomal_regulatory_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'matrix_attachment_site' OR cvterm.name = 'chromosomal_regulatory_element';
> 
> --- ************************************************
> --- *** relation: insulator ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A trancriptional cis regulatory region t ***
> --- *** hat when located between a CM and a gene ***
> --- *** 's promoter prevents the CRM from modula ***
> --- *** ting that genes expression.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW insulator AS
>   SELECT
>     feature_id AS insulator_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'insulator';
> 
> --- ************************************************
> --- *** relation: chromosomal_structural_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosomal_structural_element AS
>   SELECT
>     feature_id AS chromosomal_structural_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'centromere' OR cvterm.name = 'telomere' OR cvterm.name = 'chromosomal_structural_element';
> 
> --- ************************************************
> --- *** relation: five_prime_open_reading_frame ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_open_reading_frame AS
>   SELECT
>     feature_id AS five_prime_open_reading_frame_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_open_reading_frame';
> 
> --- ************************************************
> --- *** relation: upstream_aug_codon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A start codon upstream of the ORF.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW upstream_aug_codon AS
>   SELECT
>     feature_id AS upstream_aug_codon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'upstream_AUG_codon';
> 
> --- ************************************************
> --- *** relation: polycistronic_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding for more t ***
> --- *** han one gene product.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW polycistronic_primary_transcript AS
>   SELECT
>     feature_id AS polycistronic_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'polycistronic_primary_transcript';
> 
> --- ************************************************
> --- *** relation: monocistronic_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding for one ge ***
> --- *** ne product.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW monocistronic_primary_transcript AS
>   SELECT
>     feature_id AS monocistronic_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'monocistronic_primary_transcript';
> 
> --- ************************************************
> --- *** relation: monocistronic_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA with either a single protein pro ***
> --- *** duct, or for which the regions encoding  ***
> --- *** all its protein products overlap.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW monocistronic_mrna AS
>   SELECT
>     feature_id AS monocistronic_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'monocistronic_mRNA';
> 
> --- ************************************************
> --- *** relation: polycistronic_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA that encodes multiple proteins f ***
> --- *** rom at least two non-overlapping regions ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW polycistronic_mrna AS
>   SELECT
>     feature_id AS polycistronic_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'polycistronic_mRNA';
> 
> --- ************************************************
> --- *** relation: mini_exon_donor_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript that donates the sp ***
> --- *** liced leader to other mRNA.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW mini_exon_donor_rna AS
>   SELECT
>     feature_id AS mini_exon_donor_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mini_exon_donor_RNA';
> 
> --- ************************************************
> --- *** relation: spliced_leader_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW spliced_leader_rna AS
>   SELECT
>     feature_id AS spliced_leader_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'spliced_leader_RNA';
> 
> --- ************************************************
> --- *** relation: engineered_plasmid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A plasmid that is engineered.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_plasmid AS
>   SELECT
>     feature_id AS engineered_plasmid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_plasmid';
> 
> --- ************************************************
> --- *** relation: transcribed_spacer_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Part of an rRNA transcription unit that  ***
> --- *** is transcribed but discarded during matu ***
> --- *** ration, not giving rise to any part of r ***
> --- *** RNA.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcribed_spacer_region AS
>   SELECT
>     feature_id AS transcribed_spacer_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_transcribed_spacer_region' OR cvterm.name = 'external_transcribed_spacer_region' OR cvterm.name = 'transcribed_spacer_region';
> 
> --- ************************************************
> --- *** relation: internal_transcribed_spacer_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Non-coding regions of DNA sequence that  ***
> --- *** separate genes coding for the 28S, 5.8S, ***
> --- ***  and 18S ribosomal RNAs.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW internal_transcribed_spacer_region AS
>   SELECT
>     feature_id AS internal_transcribed_spacer_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_transcribed_spacer_region';
> 
> --- ************************************************
> --- *** relation: external_transcribed_spacer_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Non-coding regions of DNA that precede t ***
> --- *** he sequence that codes for the ribosomal ***
> --- ***  RNA.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW external_transcribed_spacer_region AS
>   SELECT
>     feature_id AS external_transcribed_spacer_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'external_transcribed_spacer_region';
> 
> --- ************************************************
> --- *** relation: tetranuc_repeat_microsat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW tetranuc_repeat_microsat AS
>   SELECT
>     feature_id AS tetranuc_repeat_microsat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tetranucleotide_repeat_microsatellite_feature';
> 
> --- ************************************************
> --- *** relation: srp_rna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW srp_rna_encoding AS
>   SELECT
>     feature_id AS srp_rna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SRP_RNA_encoding';
> 
> --- ************************************************
> --- *** relation: minisatellite ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A repeat region containing tandemly repe ***
> --- *** ated sequences having a unit length of 1 ***
> --- *** 0 to 40 bp.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW minisatellite AS
>   SELECT
>     feature_id AS minisatellite_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minisatellite';
> 
> --- ************************************************
> --- *** relation: antisense_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Antisense RNA is RNA that is transcribed ***
> --- ***  from the coding, rather than the templa ***
> --- *** te, strand of DNA. It is therefore compl ***
> --- *** ementary to mRNA.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW antisense_rna AS
>   SELECT
>     feature_id AS antisense_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'MicF_RNA' OR cvterm.name = 'antisense_RNA';
> 
> --- ************************************************
> --- *** relation: antisense_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The reverse complement of the primary tr ***
> --- *** anscript.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW antisense_primary_transcript AS
>   SELECT
>     feature_id AS antisense_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'antisense_primary_transcript';
> 
> --- ************************************************
> --- *** relation: sirna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A small RNA molecule that is the product ***
> --- ***  of a longer exogenous or endogenous dsR ***
> --- *** NA, which is either a bimolecular duplex ***
> --- ***  or very long hairpin, processed (via th ***
> --- *** e Dicer pathway) such that numerous siRN ***
> --- *** As accumulate from both strands of the d ***
> --- *** sRNA. SRNAs trigger the cleavage of thei ***
> --- *** r target molecules.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW sirna AS
>   SELECT
>     feature_id AS sirna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'siRNA';
> 
> --- ************************************************
> --- *** relation: mirna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a micro RN ***
> --- *** A.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirna_primary_transcript AS
>   SELECT
>     feature_id AS mirna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stRNA_primary_transcript' OR cvterm.name = 'miRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: strna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding a small te ***
> --- *** mporal mRNA (SO:0000649).                ***
> --- ************************************************
> ---
> 
> CREATE VIEW strna_primary_transcript AS
>   SELECT
>     feature_id AS strna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: strna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Non-coding RNAs of about 21 nucleotides  ***
> --- *** in length that regulate temporal develop ***
> --- *** ment; first discovered in C. elegans.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW strna AS
>   SELECT
>     feature_id AS strna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stRNA';
> 
> --- ************************************************
> --- *** relation: small_subunit_rrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Ribosomal RNA transcript that structures ***
> --- ***  the small subunit of the ribosome.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW small_subunit_rrna AS
>   SELECT
>     feature_id AS small_subunit_rrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_18S' OR cvterm.name = 'rRNA_16S' OR cvterm.name = 'small_subunit_rRNA';
> 
> --- ************************************************
> --- *** relation: large_subunit_rrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Ribosomal RNA transcript that structures ***
> --- ***  the large subunit of the ribosome.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW large_subunit_rrna AS
>   SELECT
>     feature_id AS large_subunit_rrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_5_8S' OR cvterm.name = 'rRNA_5S' OR cvterm.name = 'rRNA_28S' OR cvterm.name = 'rRNA_23S' OR cvterm.name = 'rRNA_25S' OR cvterm.name = 'rRNA_21S' OR cvterm.name = 'large_subunit_rRNA';
> 
> --- ************************************************
> --- *** relation: rrna_5s ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5S ribosomal RNA (5S rRNA) is a componen ***
> --- *** t of the large ribosomal subunit in both ***
> --- ***  prokaryotes and eukaryotes. In eukaryot ***
> --- *** es, it is synthesised by RNA polymerase  ***
> --- *** III (the other eukaryotic rRNAs are clea ***
> --- *** ved from a 45S precursor synthesised by  ***
> --- *** RNA polymerase I). In Xenopus oocytes, i ***
> --- *** t has been shown that fingers 4-7 of the ***
> --- ***  nine-zinc finger transcription factor T ***
> --- *** FIIIA can bind to the central region of  ***
> --- *** 5S RNA. Thus, in addition to positively  ***
> --- *** regulating 5S rRNA transcription, TFIIIA ***
> --- ***  also stabilises 5S rRNA until it is req ***
> --- *** uired for transcription.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_5s AS
>   SELECT
>     feature_id AS rrna_5s_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_5S';
> 
> --- ************************************************
> --- *** relation: rrna_28s ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A component of the large ribosomal subun ***
> --- *** it.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_28s AS
>   SELECT
>     feature_id AS rrna_28s_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_28S';
> 
> --- ************************************************
> --- *** relation: maxicircle_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mitochondrial gene located in a maxici ***
> --- *** rcle.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW maxicircle_gene AS
>   SELECT
>     feature_id AS maxicircle_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cryptogene' OR cvterm.name = 'maxicircle_gene';
> 
> --- ************************************************
> --- *** relation: ncrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An RNA transcript that does not encode f ***
> --- *** or a protein rather the RNA molecule is  ***
> --- *** the gene product.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW ncrna AS
>   SELECT
>     feature_id AS ncrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'scRNA' OR cvterm.name = 'rRNA' OR cvterm.name = 'tRNA' OR cvterm.name = 'snRNA' OR cvterm.name = 'snoRNA' OR cvterm.name = 'small_regulatory_ncRNA' OR cvterm.name = 'RNase_MRP_RNA' OR cvterm.name = 'RNase_P_RNA' OR cvterm.name = 'telomerase_RNA' OR cvterm.name = 'vault_RNA' OR cvterm.name = 'Y_RNA' OR cvterm.name = 'rasiRNA' OR cvterm.name = 'SRP_RNA' OR cvterm.name = 'guide_RNA' OR cvterm.name = 'antisense_RNA' OR cvterm.name = 'siRNA' OR cvterm.name = 'stRNA' OR cvterm.name = 'class_II_RNA' OR cvterm.name = 'class_I_RNA' OR cvterm.name = 'piRNA' OR cvterm.name = 'lincRNA' OR cvterm.name = 'rRNA_cleavage_RNA' OR cvterm.name = 'small_subunit_rRNA' OR cvterm.name = 'large_subunit_rRNA' OR cvterm.name = 'rRNA_18S' OR cvterm.name = 'rRNA_16S' OR cvterm.name = 'rRNA_5_8S' OR cvterm.name = 'rRNA_5S' OR cvterm.name = 'rRNA_28S' OR cvterm.name = 'rRNA_23S' OR cvterm.name = 'rRNA_25S' OR cvterm.name = 'rRNA_21S' OR cvterm.name = 'alanyl_tRNA' OR cvterm.name = 'asparaginyl_tRNA' OR cvterm.name = 'aspartyl_tRNA' OR cvterm.name = 'cysteinyl_tRNA' OR cvterm.name = 'glutaminyl_tRNA' OR cvterm.name = 'glutamyl_tRNA' OR cvterm.name = 'glycyl_tRNA' OR cvterm.name = 'histidyl_tRNA' OR cvterm.name = 'isoleucyl_tRNA' OR cvterm.name = 'leucyl_tRNA' OR cvterm.name = 'lysyl_tRNA' OR cvterm.name = 'methionyl_tRNA' OR cvterm.name = 'phenylalanyl_tRNA' OR cvterm.name = 'prolyl_tRNA' OR cvterm.name = 'seryl_tRNA' OR cvterm.name = 'threonyl_tRNA' OR cvterm.name = 'tryptophanyl_tRNA' OR cvterm.name = 'tyrosyl_tRNA' OR cvterm.name = 'valyl_tRNA' OR cvterm.name = 'pyrrolysyl_tRNA' OR cvterm.name = 'arginyl_tRNA' OR cvterm.name = 'selenocysteinyl_tRNA' OR cvterm.name = 'U1_snRNA' OR cvterm.name = 'U2_snRNA' OR cvterm.name = 'U4_snRNA' OR cvterm.name = 'U4atac_snRNA' OR cvterm.name = 'U5_snRNA' OR cvterm.name = 'U6_snRNA' OR cvterm.name = 'U6atac_snRNA' OR cvterm.name = 'U11_snRNA' OR cvterm.name = 'U12_snRNA' OR cvterm.name = 'C_D_box_snoRNA' OR cvterm.name = 'H_ACA_box_snoRNA' OR cvterm.name = 'U14_snoRNA' OR cvterm.name = 'U3_snoRNA' OR cvterm.name = 'methylation_guide_snoRNA' OR cvterm.name = 'pseudouridylation_guide_snoRNA' OR cvterm.name = 'miRNA' OR cvterm.name = 'RNA_6S' OR cvterm.name = 'CsrB_RsmB_RNA' OR cvterm.name = 'DsrA_RNA' OR cvterm.name = 'OxyS_RNA' OR cvterm.name = 'RprA_RNA' OR cvterm.name = 'RRE_RNA' OR cvterm.name = 'spot_42_RNA' OR cvterm.name = 'tmRNA' OR cvterm.name = 'GcvB_RNA' OR cvterm.name = 'MicF_RNA' OR cvterm.name = 'ncRNA';
> 
> --- ************************************************
> --- *** relation: strna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW strna_encoding AS
>   SELECT
>     feature_id AS strna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stRNA_encoding';
> 
> --- ************************************************
> --- *** relation: repeat_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of sequence containing one or m ***
> --- *** ore repeat units.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW repeat_region AS
>   SELECT
>     feature_id AS repeat_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'long_terminal_repeat' OR cvterm.name = 'engineered_foreign_repetitive_element' OR cvterm.name = 'inverted_repeat' OR cvterm.name = 'direct_repeat' OR cvterm.name = 'non_LTR_retrotransposon_polymeric_tract' OR cvterm.name = 'dispersed_repeat' OR cvterm.name = 'tandem_repeat' OR cvterm.name = 'repeat_fragment' OR cvterm.name = 'five_prime_LTR' OR cvterm.name = 'three_prime_LTR' OR cvterm.name = 'solo_LTR' OR cvterm.name = 'terminal_inverted_repeat' OR cvterm.name = 'five_prime_terminal_inverted_repeat' OR cvterm.name = 'three_prime_terminal_inverted_repeat' OR cvterm.name = 'target_site_duplication' OR cvterm.name = 'CRISPR' OR cvterm.name = 'satellite_DNA' OR cvterm.name = 'microsatellite' OR cvterm.name = 'minisatellite' OR cvterm.name = 'dinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'trinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'tetranucleotide_repeat_microsatellite_feature' OR cvterm.name = 'repeat_region';
> 
> --- ************************************************
> --- *** relation: dispersed_repeat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A repeat that is located at dispersed si ***
> --- *** tes in the genome.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW dispersed_repeat AS
>   SELECT
>     feature_id AS dispersed_repeat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dispersed_repeat';
> 
> --- ************************************************
> --- *** relation: tmrna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW tmrna_encoding AS
>   SELECT
>     feature_id AS tmrna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tmRNA_encoding';
> 
> --- ************************************************
> --- *** relation: spliceosomal_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An intron which is spliced by the splice ***
> --- *** osome.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW spliceosomal_intron AS
>   SELECT
>     feature_id AS spliceosomal_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U2_intron' OR cvterm.name = 'U12_intron' OR cvterm.name = 'spliceosomal_intron';
> 
> --- ************************************************
> --- *** relation: trna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW trna_encoding AS
>   SELECT
>     feature_id AS trna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tRNA_encoding';
> 
> --- ************************************************
> --- *** relation: introgressed_chromosome_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW introgressed_chromosome_region AS
>   SELECT
>     feature_id AS introgressed_chromosome_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'introgressed_chromosome_region';
> 
> --- ************************************************
> --- *** relation: monocistronic_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that is monocistronic.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW monocistronic_transcript AS
>   SELECT
>     feature_id AS monocistronic_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'monocistronic_transcript';
> 
> --- ************************************************
> --- *** relation: mobile_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An intron (mitochondrial, chloroplast, n ***
> --- *** uclear or prokaryotic) that encodes a do ***
> --- *** uble strand sequence specific endonuclea ***
> --- *** se allowing for mobility.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW mobile_intron AS
>   SELECT
>     feature_id AS mobile_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mobile_intron';
> 
> --- ************************************************
> --- *** relation: insertion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of sequence that has been inser ***
> --- *** ted.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW insertion AS
>   SELECT
>     feature_id AS insertion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transgenic_insertion' OR cvterm.name = 'insertion';
> 
> --- ************************************************
> --- *** relation: est_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A match against an EST sequence.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW est_match AS
>   SELECT
>     feature_id AS est_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'EST_match';
> 
> --- ************************************************
> --- *** relation: sequence_rearrangement_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_rearrangement_feature AS
>   SELECT
>     feature_id AS sequence_rearrangement_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'specific_recombination_site' OR cvterm.name = 'chromosome_breakage_sequence' OR cvterm.name = 'internal_eliminated_sequence' OR cvterm.name = 'macronucleus_destined_segment' OR cvterm.name = 'recombination_feature_of_rearranged_gene' OR cvterm.name = 'site_specific_recombination_target_region' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_feature' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_spacer' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_signal_feature' OR cvterm.name = 'D_gene' OR cvterm.name = 'V_gene' OR cvterm.name = 'J_gene' OR cvterm.name = 'C_gene' OR cvterm.name = 'D_J_C_cluster' OR cvterm.name = 'J_C_cluster' OR cvterm.name = 'J_cluster' OR cvterm.name = 'V_cluster' OR cvterm.name = 'V_J_cluster' OR cvterm.name = 'V_J_C_cluster' OR cvterm.name = 'C_cluster' OR cvterm.name = 'D_cluster' OR cvterm.name = 'D_J_cluster' OR cvterm.name = 'three_prime_D_spacer' OR cvterm.name = 'five_prime_D_spacer' OR cvterm.name = 'J_spacer' OR cvterm.name = 'V_spacer' OR cvterm.name = 'VD_gene' OR cvterm.name = 'DJ_gene' OR cvterm.name = 'VDJ_gene' OR cvterm.name = 'VJ_gene' OR cvterm.name = 'DJ_J_cluster' OR cvterm.name = 'VDJ_J_C_cluster' OR cvterm.name = 'VDJ_J_cluster' OR cvterm.name = 'VJ_C_cluster' OR cvterm.name = 'VJ_J_C_cluster' OR cvterm.name = 'VJ_J_cluster' OR cvterm.name = 'D_DJ_C_cluster' OR cvterm.name = 'D_DJ_cluster' OR cvterm.name = 'D_DJ_J_C_cluster' OR cvterm.name = 'D_DJ_J_cluster' OR cvterm.name = 'V_DJ_cluster' OR cvterm.name = 'V_DJ_J_cluster' OR cvterm.name = 'V_VDJ_C_cluster' OR cvterm.name = 'V_VDJ_cluster' OR cvterm.name = 'V_VDJ_J_cluster' OR cvterm.name = 'V_VJ_C_cluster' OR cvterm.name = 'V_VJ_cluster' OR cvterm.name = 'V_VJ_J_cluster' OR cvterm.name = 'V_D_DJ_C_cluster' OR cvterm.name = 'V_D_DJ_cluster' OR cvterm.name = 'V_D_DJ_J_C_cluster' OR cvterm.name = 'V_D_DJ_J_cluster' OR cvterm.name = 'V_D_J_C_cluster' OR cvterm.name = 'V_D_J_cluster' OR cvterm.name = 'DJ_C_cluster' OR cvterm.name = 'DJ_J_C_cluster' OR cvterm.name = 'VDJ_C_cluster' OR cvterm.name = 'V_DJ_C_cluster' OR cvterm.name = 'V_DJ_J_C_cluster' OR cvterm.name = 'V_VDJ_J_C_cluster' OR cvterm.name = 'V_VJ_J_C_cluster' OR cvterm.name = 'J_gene_recombination_feature' OR cvterm.name = 'D_gene_recombination_feature' OR cvterm.name = 'V_gene_recombination_feature' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'integration_excision_site' OR cvterm.name = 'resolution_site' OR cvterm.name = 'inversion_site' OR cvterm.name = 'inversion_site_part' OR cvterm.name = 'attI_site' OR cvterm.name = 'attP_site' OR cvterm.name = 'attB_site' OR cvterm.name = 'attL_site' OR cvterm.name = 'attR_site' OR cvterm.name = 'attC_site' OR cvterm.name = 'attCtn_site' OR cvterm.name = 'loxP_site' OR cvterm.name = 'dif_site' OR cvterm.name = 'FRT_site' OR cvterm.name = 'IRLinv_site' OR cvterm.name = 'IRRinv_site' OR cvterm.name = 'sequence_rearrangement_feature';
> 
> --- ************************************************
> --- *** relation: chromosome_breakage_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence within the micronuclear DNA o ***
> --- *** f ciliates at which chromosome breakage  ***
> --- *** and telomere addition occurs during nucl ***
> --- *** ear differentiation.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome_breakage_sequence AS
>   SELECT
>     feature_id AS chromosome_breakage_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromosome_breakage_sequence';
> 
> --- ************************************************
> --- *** relation: internal_eliminated_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence eliminated from the genome of ***
> --- ***  ciliates during nuclear differentiation ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW internal_eliminated_sequence AS
>   SELECT
>     feature_id AS internal_eliminated_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_eliminated_sequence';
> 
> --- ************************************************
> --- *** relation: macronucleus_destined_segment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence that is conserved, although r ***
> --- *** earranged relative to the micronucleus,  ***
> --- *** in the macronucleus of a ciliate genome. ***
> --- ************************************************
> ---
> 
> CREATE VIEW macronucleus_destined_segment AS
>   SELECT
>     feature_id AS macronucleus_destined_segment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'macronucleus_destined_segment';
> 
> --- ************************************************
> --- *** relation: transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An RNA synthesized on a DNA or RNA templ ***
> --- *** ate by an RNA polymerase.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcript AS
>   SELECT
>     feature_id AS transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polycistronic_transcript' OR cvterm.name = 'transcript_with_translational_frameshift' OR cvterm.name = 'primary_transcript' OR cvterm.name = 'mature_transcript' OR cvterm.name = 'transcript_bound_by_nucleic_acid' OR cvterm.name = 'transcript_bound_by_protein' OR cvterm.name = 'enzymatic_RNA' OR cvterm.name = 'trans_spliced_transcript' OR cvterm.name = 'monocistronic_transcript' OR cvterm.name = 'aberrant_processed_transcript' OR cvterm.name = 'edited_transcript' OR cvterm.name = 'alternatively_spliced_transcript' OR cvterm.name = 'dicistronic_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'protein_coding_primary_transcript' OR cvterm.name = 'nc_primary_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'mini_exon_donor_RNA' OR cvterm.name = 'antisense_primary_transcript' OR cvterm.name = 'capped_primary_transcript' OR cvterm.name = 'pre_edited_mRNA' OR cvterm.name = 'scRNA_primary_transcript' OR cvterm.name = 'rRNA_primary_transcript' OR cvterm.name = 'tRNA_primary_transcript' OR cvterm.name = 'snRNA_primary_transcript' OR cvterm.name = 'snoRNA_primary_transcript' OR cvterm.name = 'tmRNA_primary_transcript' OR cvterm.name = 'SRP_RNA_primary_transcript' OR cvterm.name = 'miRNA_primary_transcript' OR cvterm.name = 'rRNA_small_subunit_primary_transcript' OR cvterm.name = 'rRNA_large_subunit_primary_transcript' OR cvterm.name = 'alanine_tRNA_primary_transcript' OR cvterm.name = 'arginine_tRNA_primary_transcript' OR cvterm.name = 'asparagine_tRNA_primary_transcript' OR cvterm.name = 'aspartic_acid_tRNA_primary_transcript' OR cvterm.name = 'cysteine_tRNA_primary_transcript' OR cvterm.name = 'glutamic_acid_tRNA_primary_transcript' OR cvterm.name = 'glutamine_tRNA_primary_transcript' OR cvterm.name = 'glycine_tRNA_primary_transcript' OR cvterm.name = 'histidine_tRNA_primary_transcript' OR cvterm.name = 'isoleucine_tRNA_primary_transcript' OR cvterm.name = 'leucine_tRNA_primary_transcript' OR cvterm.name = 'lysine_tRNA_primary_transcript' OR cvterm.name = 'methionine_tRNA_primary_transcript' OR cvterm.name = 'phenylalanine_tRNA_primary_transcript' OR cvterm.name = 'proline_tRNA_primary_transcript' OR cvterm.name = 'serine_tRNA_primary_transcript' OR cvterm.name = 'threonine_tRNA_primary_transcript' OR cvterm.name = 'tryptophan_tRNA_primary_transcript' OR cvterm.name = 'tyrosine_tRNA_primary_transcript' OR cvterm.name = 'valine_tRNA_primary_transcript' OR cvterm.name = 'pyrrolysine_tRNA_primary_transcript' OR cvterm.name = 'selenocysteine_tRNA_primary_transcript' OR cvterm.name = 'methylation_guide_snoRNA_primary_transcript' OR cvterm.name = 'rRNA_cleavage_snoRNA_primary_transcript' OR cvterm.name = 'C_D_box_snoRNA_primary_transcript' OR cvterm.name = 'H_ACA_box_snoRNA_primary_transcript' OR cvterm.name = 'U14_snoRNA_primary_transcript' OR cvterm.name = 'stRNA_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'mRNA' OR cvterm.name = 'ncRNA' OR cvterm.name = 'mRNA_with_frameshift' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'exemplar_mRNA' OR cvterm.name = 'capped_mRNA' OR cvterm.name = 'polyadenylated_mRNA' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'recoded_mRNA' OR cvterm.name = 'mRNA_with_minus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_2_frameshift' OR cvterm.name = 'mRNA_with_minus_2_frameshift' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'mRNA_recoded_by_translational_bypass' OR cvterm.name = 'mRNA_recoded_by_codon_redefinition' OR cvterm.name = 'scRNA' OR cvterm.name = 'rRNA' OR cvterm.name = 'tRNA' OR cvterm.name = 'snRNA' OR cvterm.name = 'snoRNA' OR cvterm.name = 'small_regulatory_ncRNA' OR cvterm.name = 'RNase_MRP_RNA' OR cvterm.name = 'RNase_P_RNA' OR cvterm.name = 'telomerase_RNA' OR cvterm.name = 'vault_RNA' OR cvterm.name = 'Y_RNA' OR cvterm.name = 'rasiRNA' OR cvterm.name = 'SRP_RNA' OR cvterm.name = 'guide_RNA' OR cvterm.name = 'antisense_RNA' OR cvterm.name = 'siRNA' OR cvterm.name = 'stRNA' OR cvterm.name = 'class_II_RNA' OR cvterm.name = 'class_I_RNA' OR cvterm.name = 'piRNA' OR cvterm.name = 'lincRNA' OR cvterm.name = 'rRNA_cleavage_RNA' OR cvterm.name = 'small_subunit_rRNA' OR cvterm.name = 'large_subunit_rRNA' OR cvterm.name = 'rRNA_18S' OR cvterm.name = 'rRNA_16S' OR cvterm.name = 'rRNA_5_8S' OR cvterm.name = 'rRNA_5S' OR cvterm.name = 'rRNA_28S' OR cvterm.name = 'rRNA_23S' OR cvterm.name = 'rRNA_25S' OR cvterm.name = 'rRNA_21S' OR cvterm.name = 'alanyl_tRNA' OR cvterm.name = 'asparaginyl_tRNA' OR cvterm.name = 'aspartyl_tRNA' OR cvterm.name = 'cysteinyl_tRNA' OR cvterm.name = 'glutaminyl_tRNA' OR cvterm.name = 'glutamyl_tRNA' OR cvterm.name = 'glycyl_tRNA' OR cvterm.name = 'histidyl_tRNA' OR cvterm.name = 'isoleucyl_tRNA' OR cvterm.name = 'leucyl_tRNA' OR cvterm.name = 'lysyl_tRNA' OR cvterm.name = 'methionyl_tRNA' OR cvterm.name = 'phenylalanyl_tRNA' OR cvterm.name = 'prolyl_tRNA' OR cvterm.name = 'seryl_tRNA' OR cvterm.name = 'threonyl_tRNA' OR cvterm.name = 'tryptophanyl_tRNA' OR cvterm.name = 'tyrosyl_tRNA' OR cvterm.name = 'valyl_tRNA' OR cvterm.name = 'pyrrolysyl_tRNA' OR cvterm.name = 'arginyl_tRNA' OR cvterm.name = 'selenocysteinyl_tRNA' OR cvterm.name = 'U1_snRNA' OR cvterm.name = 'U2_snRNA' OR cvterm.name = 'U4_snRNA' OR cvterm.name = 'U4atac_snRNA' OR cvterm.name = 'U5_snRNA' OR cvterm.name = 'U6_snRNA' OR cvterm.name = 'U6atac_snRNA' OR cvterm.name = 'U11_snRNA' OR cvterm.name = 'U12_snRNA' OR cvterm.name = 'C_D_box_snoRNA' OR cvterm.name = 'H_ACA_box_snoRNA' OR cvterm.name = 'U14_snoRNA' OR cvterm.name = 'U3_snoRNA' OR cvterm.name = 'methylation_guide_snoRNA' OR cvterm.name = 'pseudouridylation_guide_snoRNA' OR cvterm.name = 'miRNA' OR cvterm.name = 'RNA_6S' OR cvterm.name = 'CsrB_RsmB_RNA' OR cvterm.name = 'DsrA_RNA' OR cvterm.name = 'OxyS_RNA' OR cvterm.name = 'RprA_RNA' OR cvterm.name = 'RRE_RNA' OR cvterm.name = 'spot_42_RNA' OR cvterm.name = 'tmRNA' OR cvterm.name = 'GcvB_RNA' OR cvterm.name = 'MicF_RNA' OR cvterm.name = 'ribozyme' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'edited_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'transcript';
> 
> --- ************************************************
> --- *** relation: canonical_three_prime_splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The canonical 3' splice site has the seq ***
> --- *** uence "AG".                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW canonical_three_prime_splice_site AS
>   SELECT
>     feature_id AS canonical_three_prime_splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'canonical_three_prime_splice_site';
> 
> --- ************************************************
> --- *** relation: canonical_five_prime_splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The canonical 5' splice site has the seq ***
> --- *** uence "GT".                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW canonical_five_prime_splice_site AS
>   SELECT
>     feature_id AS canonical_five_prime_splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'canonical_five_prime_splice_site';
> 
> --- ************************************************
> --- *** relation: non_canonical_three_prime_splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A 3' splice site that does not have the  ***
> --- *** sequence "AG".                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_canonical_three_prime_splice_site AS
>   SELECT
>     feature_id AS non_canonical_three_prime_splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_canonical_three_prime_splice_site';
> 
> --- ************************************************
> --- *** relation: non_canonical_five_prime_splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A 5' splice site which does not have the ***
> --- ***  sequence "GT".                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_canonical_five_prime_splice_site AS
>   SELECT
>     feature_id AS non_canonical_five_prime_splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_canonical_five_prime_splice_site';
> 
> --- ************************************************
> --- *** relation: non_canonical_start_codon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A start codon that is not the usual AUG  ***
> --- *** sequence.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_canonical_start_codon AS
>   SELECT
>     feature_id AS non_canonical_start_codon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'four_bp_start_codon' OR cvterm.name = 'CTG_start_codon' OR cvterm.name = 'non_canonical_start_codon';
> 
> --- ************************************************
> --- *** relation: aberrant_processed_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that has been processed "in ***
> --- *** correctly", for example by the failure o ***
> --- *** f splicing of one or more exons.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW aberrant_processed_transcript AS
>   SELECT
>     feature_id AS aberrant_processed_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'aberrant_processed_transcript';
> 
> --- ************************************************
> --- *** relation: exonic_splice_enhancer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Exonic splicing enhancers (ESEs) facilit ***
> --- *** ate exon definition by assisting in the  ***
> --- *** recruitment of splicing factors to the a ***
> --- *** djacent intron.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW exonic_splice_enhancer AS
>   SELECT
>     feature_id AS exonic_splice_enhancer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'exonic_splice_enhancer';
> 
> --- ************************************************
> --- *** relation: nuclease_sensitive_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of nucleotide sequence targeted ***
> --- ***  by a nuclease enzyme.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW nuclease_sensitive_site AS
>   SELECT
>     feature_id AS nuclease_sensitive_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nuclease_hypersensitive_site' OR cvterm.name = 'group_1_intron_homing_endonuclease_target_region' OR cvterm.name = 'DNAseI_hypersensitive_site' OR cvterm.name = 'nuclease_sensitive_site';
> 
> --- ************************************************
> --- *** relation: dnasei_hypersensitive_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW dnasei_hypersensitive_site AS
>   SELECT
>     feature_id AS dnasei_hypersensitive_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DNAseI_hypersensitive_site';
> 
> --- ************************************************
> --- *** relation: translocation_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** For some translocations, particularly bu ***
> --- *** t not exclusively, reciprocal translocat ***
> --- *** ions, the chromosomes carrying non-homol ***
> --- *** ogous centromeres may be recovered indep ***
> --- *** endently. These chromosomes are describe ***
> --- *** d as translocation elements.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW translocation_element AS
>   SELECT
>     feature_id AS translocation_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'translocation_element';
> 
> --- ************************************************
> --- *** relation: deletion_junction ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The space between two bases in a sequenc ***
> --- *** e which marks the position where a delet ***
> --- *** ion has occurred.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW deletion_junction AS
>   SELECT
>     feature_id AS deletion_junction_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deletion_junction';
> 
> --- ************************************************
> --- *** relation: golden_path ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A set of subregions selected from sequen ***
> --- *** ce contigs which when concatenated form  ***
> --- *** a nonredundant linear sequence.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW golden_path AS
>   SELECT
>     feature_id AS golden_path_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'golden_path';
> 
> --- ************************************************
> --- *** relation: cdna_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A match against cDNA sequence.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW cdna_match AS
>   SELECT
>     feature_id AS cdna_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cDNA_match';
> 
> --- ************************************************
> --- *** relation: gene_with_polycistronic_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes a polycistronic tran ***
> --- *** script.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_polycistronic_transcript AS
>   SELECT
>     feature_id AS gene_with_polycistronic_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_dicistronic_transcript' OR cvterm.name = 'gene_with_dicistronic_primary_transcript' OR cvterm.name = 'gene_with_dicistronic_mRNA' OR cvterm.name = 'gene_with_polycistronic_transcript';
> 
> --- ************************************************
> --- *** relation: cleaved_initiator_methionine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The initiator methionine that has been c ***
> --- *** leaved from a mature polypeptide sequenc ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW cleaved_initiator_methionine AS
>   SELECT
>     feature_id AS cleaved_initiator_methionine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cleaved_initiator_methionine';
> 
> --- ************************************************
> --- *** relation: gene_with_dicistronic_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes a dicistronic transc ***
> --- *** ript.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_dicistronic_transcript AS
>   SELECT
>     feature_id AS gene_with_dicistronic_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_dicistronic_primary_transcript' OR cvterm.name = 'gene_with_dicistronic_mRNA' OR cvterm.name = 'gene_with_dicistronic_transcript';
> 
> --- ************************************************
> --- *** relation: gene_with_recoded_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes an mRNA that is reco ***
> --- *** ded.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_recoded_mrna AS
>   SELECT
>     feature_id AS gene_with_recoded_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_stop_codon_read_through' OR cvterm.name = 'gene_with_mRNA_recoded_by_translational_bypass' OR cvterm.name = 'gene_with_transcript_with_translational_frameshift' OR cvterm.name = 'gene_with_stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'gene_with_stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'gene_with_recoded_mRNA';
> 
> --- ************************************************
> --- *** relation: snp ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** SNPs are single base pair positions in g ***
> --- *** enomic DNA at which different sequence a ***
> --- *** lternatives (alleles) exist in normal in ***
> --- *** dividuals in some population(s), wherein ***
> --- ***  the least frequent allele has an abunda ***
> --- *** nce of 1% or greater.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW snp AS
>   SELECT
>     feature_id AS snp_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SNP';
> 
> --- ************************************************
> --- *** relation: reagent ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence used in experiment.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW reagent AS
>   SELECT
>     feature_id AS reagent_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'PCR_product' OR cvterm.name = 'clone' OR cvterm.name = 'rescue_region' OR cvterm.name = 'oligo' OR cvterm.name = 'clone_insert' OR cvterm.name = 'cloned_region' OR cvterm.name = 'databank_entry' OR cvterm.name = 'RAPD' OR cvterm.name = 'genomic_clone' OR cvterm.name = 'cDNA_clone' OR cvterm.name = 'tiling_path_clone' OR cvterm.name = 'validated_cDNA_clone' OR cvterm.name = 'invalidated_cDNA_clone' OR cvterm.name = 'three_prime_RACE_clone' OR cvterm.name = 'chimeric_cDNA_clone' OR cvterm.name = 'genomically_contaminated_cDNA_clone' OR cvterm.name = 'polyA_primed_cDNA_clone' OR cvterm.name = 'partially_processed_cDNA_clone' OR cvterm.name = 'engineered_rescue_region' OR cvterm.name = 'aptamer' OR cvterm.name = 'probe' OR cvterm.name = 'tag' OR cvterm.name = 'ss_oligo' OR cvterm.name = 'ds_oligo' OR cvterm.name = 'DNAzyme' OR cvterm.name = 'synthetic_oligo' OR cvterm.name = 'DNA_aptamer' OR cvterm.name = 'RNA_aptamer' OR cvterm.name = 'microarray_oligo' OR cvterm.name = 'SAGE_tag' OR cvterm.name = 'STS' OR cvterm.name = 'EST' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'five_prime_EST' OR cvterm.name = 'three_prime_EST' OR cvterm.name = 'UST' OR cvterm.name = 'RST' OR cvterm.name = 'three_prime_UST' OR cvterm.name = 'five_prime_UST' OR cvterm.name = 'three_prime_RST' OR cvterm.name = 'five_prime_RST' OR cvterm.name = 'primer' OR cvterm.name = 'sequencing_primer' OR cvterm.name = 'forward_primer' OR cvterm.name = 'reverse_primer' OR cvterm.name = 'RNAi_reagent' OR cvterm.name = 'DNA_constraint_sequence' OR cvterm.name = 'morpholino_oligo' OR cvterm.name = 'PNA_oligo' OR cvterm.name = 'LNA_oligo' OR cvterm.name = 'TNA_oligo' OR cvterm.name = 'GNA_oligo' OR cvterm.name = 'R_GNA_oligo' OR cvterm.name = 'S_GNA_oligo' OR cvterm.name = 'cloned_cDNA_insert' OR cvterm.name = 'cloned_genomic_insert' OR cvterm.name = 'engineered_insert' OR cvterm.name = 'BAC_cloned_genomic_insert' OR cvterm.name = 'reagent';
> 
> --- ************************************************
> --- *** relation: oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A short oligonucleotide sequence, of len ***
> --- *** gth on the order of 10's of bases; eithe ***
> --- *** r single or double stranded.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW oligo AS
>   SELECT
>     feature_id AS oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'aptamer' OR cvterm.name = 'probe' OR cvterm.name = 'tag' OR cvterm.name = 'ss_oligo' OR cvterm.name = 'ds_oligo' OR cvterm.name = 'DNAzyme' OR cvterm.name = 'synthetic_oligo' OR cvterm.name = 'DNA_aptamer' OR cvterm.name = 'RNA_aptamer' OR cvterm.name = 'microarray_oligo' OR cvterm.name = 'SAGE_tag' OR cvterm.name = 'STS' OR cvterm.name = 'EST' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'five_prime_EST' OR cvterm.name = 'three_prime_EST' OR cvterm.name = 'UST' OR cvterm.name = 'RST' OR cvterm.name = 'three_prime_UST' OR cvterm.name = 'five_prime_UST' OR cvterm.name = 'three_prime_RST' OR cvterm.name = 'five_prime_RST' OR cvterm.name = 'primer' OR cvterm.name = 'sequencing_primer' OR cvterm.name = 'forward_primer' OR cvterm.name = 'reverse_primer' OR cvterm.name = 'RNAi_reagent' OR cvterm.name = 'DNA_constraint_sequence' OR cvterm.name = 'morpholino_oligo' OR cvterm.name = 'PNA_oligo' OR cvterm.name = 'LNA_oligo' OR cvterm.name = 'TNA_oligo' OR cvterm.name = 'GNA_oligo' OR cvterm.name = 'R_GNA_oligo' OR cvterm.name = 'S_GNA_oligo' OR cvterm.name = 'oligo';
> 
> --- ************************************************
> --- *** relation: gene_with_stop_codon_read_through ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes a transcript with st ***
> --- *** op codon readthrough.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_stop_codon_read_through AS
>   SELECT
>     feature_id AS gene_with_stop_codon_read_through_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'gene_with_stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'gene_with_stop_codon_read_through';
> 
> --- ************************************************
> --- *** relation: gene_with_stop_codon_redefined_as_pyrrolysine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene encoding an mRNA that has the sto ***
> --- *** p codon redefined as pyrrolysine.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_stop_codon_redefined_as_pyrrolysine AS
>   SELECT
>     feature_id AS gene_with_stop_codon_redefined_as_pyrrolysine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_stop_codon_redefined_as_pyrrolysine';
> 
> --- ************************************************
> --- *** relation: junction ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_feature with an extent of zer ***
> --- *** o.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW junction AS
>   SELECT
>     feature_id AS junction_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'clone_insert_end' OR cvterm.name = 'clone_insert_start' OR cvterm.name = 'exon_junction' OR cvterm.name = 'insertion_site' OR cvterm.name = 'deletion_junction' OR cvterm.name = 'chromosome_breakpoint' OR cvterm.name = 'splice_junction' OR cvterm.name = 'polyA_junction' OR cvterm.name = 'trans_splice_junction' OR cvterm.name = 'transposable_element_insertion_site' OR cvterm.name = 'inversion_breakpoint' OR cvterm.name = 'translocation_breakpoint' OR cvterm.name = 'insertion_breakpoint' OR cvterm.name = 'deletion_breakpoint' OR cvterm.name = 'junction';
> 
> --- ************************************************
> --- *** relation: remark ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A comment about the sequence.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW remark AS
>   SELECT
>     feature_id AS remark_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_difference' OR cvterm.name = 'experimental_result_region' OR cvterm.name = 'polypeptide_sequencing_information' OR cvterm.name = 'possible_base_call_error' OR cvterm.name = 'possible_assembly_error' OR cvterm.name = 'overlapping_feature_set' OR cvterm.name = 'no_output' OR cvterm.name = 'overlapping_EST_set' OR cvterm.name = 'non_adjacent_residues' OR cvterm.name = 'non_terminal_residue' OR cvterm.name = 'sequence_conflict' OR cvterm.name = 'sequence_uncertainty' OR cvterm.name = 'remark';
> 
> --- ************************************************
> --- *** relation: possible_base_call_error ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of sequence where the validity  ***
> --- *** of the base calling is questionable.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW possible_base_call_error AS
>   SELECT
>     feature_id AS possible_base_call_error_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'possible_base_call_error';
> 
> --- ************************************************
> --- *** relation: possible_assembly_error ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of sequence where there may hav ***
> --- *** e been an error in the assembly.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW possible_assembly_error AS
>   SELECT
>     feature_id AS possible_assembly_error_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'possible_assembly_error';
> 
> --- ************************************************
> --- *** relation: experimental_result_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of sequence implicated in an ex ***
> --- *** perimental result.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW experimental_result_region AS
>   SELECT
>     feature_id AS experimental_result_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'overlapping_feature_set' OR cvterm.name = 'no_output' OR cvterm.name = 'overlapping_EST_set' OR cvterm.name = 'experimental_result_region';
> 
> --- ************************************************
> --- *** relation: gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region (or regions) that includes all  ***
> --- *** of the sequence elements necessary to en ***
> --- *** code a functional transcript. A gene may ***
> --- ***  include regulatory regions, transcribed ***
> --- ***  regions and/or other functional sequenc ***
> --- *** e regions.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene AS
>   SELECT
>     feature_id AS gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nuclear_gene' OR cvterm.name = 'mt_gene' OR cvterm.name = 'plastid_gene' OR cvterm.name = 'nucleomorph_gene' OR cvterm.name = 'plasmid_gene' OR cvterm.name = 'proviral_gene' OR cvterm.name = 'transposable_element_gene' OR cvterm.name = 'silenced_gene' OR cvterm.name = 'engineered_gene' OR cvterm.name = 'foreign_gene' OR cvterm.name = 'fusion_gene' OR cvterm.name = 'recombinationally_rearranged_gene' OR cvterm.name = 'gene_with_trans_spliced_transcript' OR cvterm.name = 'gene_with_polycistronic_transcript' OR cvterm.name = 'rescue_gene' OR cvterm.name = 'post_translationally_regulated_gene' OR cvterm.name = 'negatively_autoregulated_gene' OR cvterm.name = 'positively_autoregulated_gene' OR cvterm.name = 'translationally_regulated_gene' OR cvterm.name = 'epigenetically_modified_gene' OR cvterm.name = 'transgene' OR cvterm.name = 'predicted_gene' OR cvterm.name = 'protein_coding_gene' OR cvterm.name = 'retrogene' OR cvterm.name = 'ncRNA_gene' OR cvterm.name = 'cryptic_gene' OR cvterm.name = 'gene_cassette' OR cvterm.name = 'kinetoplast_gene' OR cvterm.name = 'maxicircle_gene' OR cvterm.name = 'minicircle_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'apicoplast_gene' OR cvterm.name = 'ct_gene' OR cvterm.name = 'chromoplast_gene' OR cvterm.name = 'cyanelle_gene' OR cvterm.name = 'leucoplast_gene' OR cvterm.name = 'proplastid_gene' OR cvterm.name = 'endogenous_retroviral_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'gene_silenced_by_DNA_modification' OR cvterm.name = 'gene_silenced_by_RNA_interference' OR cvterm.name = 'gene_silenced_by_histone_modification' OR cvterm.name = 'gene_silenced_by_DNA_methylation' OR cvterm.name = 'gene_silenced_by_histone_methylation' OR cvterm.name = 'gene_silenced_by_histone_deacetylation' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'recombinationally_inverted_gene' OR cvterm.name = 'recombinationally_rearranged_vertebrate_immune_system_gene' OR cvterm.name = 'gene_with_dicistronic_transcript' OR cvterm.name = 'gene_with_dicistronic_primary_transcript' OR cvterm.name = 'gene_with_dicistronic_mRNA' OR cvterm.name = 'wild_type_rescue_gene' OR cvterm.name = 'gene_rearranged_at_DNA_level' OR cvterm.name = 'maternally_imprinted_gene' OR cvterm.name = 'paternally_imprinted_gene' OR cvterm.name = 'allelically_excluded_gene' OR cvterm.name = 'floxed_gene' OR cvterm.name = 'gene_with_polyadenylated_mRNA' OR cvterm.name = 'gene_with_mRNA_with_frameshift' OR cvterm.name = 'gene_with_edited_transcript' OR cvterm.name = 'gene_with_recoded_mRNA' OR cvterm.name = 'gene_with_stop_codon_read_through' OR cvterm.name = 'gene_with_mRNA_recoded_by_translational_bypass' OR cvterm.name = 'gene_with_transcript_with_translational_frameshift' OR cvterm.name = 'gene_with_stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'gene_with_stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'gRNA_gene' OR cvterm.name = 'miRNA_gene' OR cvterm.name = 'scRNA_gene' OR cvterm.name = 'snoRNA_gene' OR cvterm.name = 'snRNA_gene' OR cvterm.name = 'SRP_RNA_gene' OR cvterm.name = 'stRNA_gene' OR cvterm.name = 'tmRNA_gene' OR cvterm.name = 'tRNA_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'gene';
> 
> --- ************************************************
> --- *** relation: tandem_repeat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Two or more adjcent copies of a region ( ***
> --- *** of length greater than 1).               ***
> --- ************************************************
> ---
> 
> CREATE VIEW tandem_repeat AS
>   SELECT
>     feature_id AS tandem_repeat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'satellite_DNA' OR cvterm.name = 'microsatellite' OR cvterm.name = 'minisatellite' OR cvterm.name = 'dinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'trinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'tetranucleotide_repeat_microsatellite_feature' OR cvterm.name = 'tandem_repeat';
> 
> --- ************************************************
> --- *** relation: trans_splice_acceptor_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The 3' splice site of the acceptor prima ***
> --- *** ry transcript.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW trans_splice_acceptor_site AS
>   SELECT
>     feature_id AS trans_splice_acceptor_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SL1_acceptor_site' OR cvterm.name = 'SL2_acceptor_site' OR cvterm.name = 'trans_splice_acceptor_site';
> 
> --- ************************************************
> --- *** relation: trans_splice_donor_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The 5' five prime splice site region of  ***
> --- *** the donor RNA.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW trans_splice_donor_site AS
>   SELECT
>     feature_id AS trans_splice_donor_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'trans_splice_donor_site';
> 
> --- ************************************************
> --- *** relation: sl1_acceptor_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sl1_acceptor_site AS
>   SELECT
>     feature_id AS sl1_acceptor_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SL1_acceptor_site';
> 
> --- ************************************************
> --- *** relation: sl2_acceptor_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sl2_acceptor_site AS
>   SELECT
>     feature_id AS sl2_acceptor_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SL2_acceptor_site';
> 
> --- ************************************************
> --- *** relation: gene_with_stop_codon_redefined_as_selenocysteine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene encoding an mRNA that has the sto ***
> --- *** p codon redefined as selenocysteine.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_stop_codon_redefined_as_selenocysteine AS
>   SELECT
>     feature_id AS gene_with_stop_codon_redefined_as_selenocysteine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_stop_codon_redefined_as_selenocysteine';
> 
> --- ************************************************
> --- *** relation: gene_with_mrna_recoded_by_translational_bypass ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene with mRNA recoded by translationa ***
> --- *** l bypass.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_mrna_recoded_by_translational_bypass AS
>   SELECT
>     feature_id AS gene_with_mrna_recoded_by_translational_bypass_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_mRNA_recoded_by_translational_bypass';
> 
> --- ************************************************
> --- *** relation: gene_with_transcript_with_translational_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene encoding a transcript that has a  ***
> --- *** translational frameshift.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_transcript_with_translational_frameshift AS
>   SELECT
>     feature_id AS gene_with_transcript_with_translational_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_transcript_with_translational_frameshift';
> 
> --- ************************************************
> --- *** relation: dna_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif that is active in the DNA form o ***
> --- *** f the sequence.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW dna_motif AS
>   SELECT
>     feature_id AS dna_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'PSE_motif' OR cvterm.name = 'GC_rich_promoter_region' OR cvterm.name = 'minus_10_signal' OR cvterm.name = 'minus_35_signal' OR cvterm.name = 'DMv4_motif' OR cvterm.name = 'DMv5_motif' OR cvterm.name = 'DMv3_motif' OR cvterm.name = 'DMv2_motif' OR cvterm.name = 'DPE1_motif' OR cvterm.name = 'DMv1_motif' OR cvterm.name = 'NDM2_motif' OR cvterm.name = 'NDM3_motif' OR cvterm.name = 'DNA_motif';
> 
> --- ************************************************
> --- *** relation: nucleotide_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of nucleotide sequence correspo ***
> --- *** nding to a known motif.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW nucleotide_motif AS
>   SELECT
>     feature_id AS nucleotide_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DNA_motif' OR cvterm.name = 'RNA_motif' OR cvterm.name = 'PSE_motif' OR cvterm.name = 'GC_rich_promoter_region' OR cvterm.name = 'minus_10_signal' OR cvterm.name = 'minus_35_signal' OR cvterm.name = 'DMv4_motif' OR cvterm.name = 'DMv5_motif' OR cvterm.name = 'DMv3_motif' OR cvterm.name = 'DMv2_motif' OR cvterm.name = 'DPE1_motif' OR cvterm.name = 'DMv1_motif' OR cvterm.name = 'NDM2_motif' OR cvterm.name = 'NDM3_motif' OR cvterm.name = 'RNA_internal_loop' OR cvterm.name = 'A_minor_RNA_motif' OR cvterm.name = 'RNA_junction_loop' OR cvterm.name = 'hammerhead_ribozyme' OR cvterm.name = 'asymmetric_RNA_internal_loop' OR cvterm.name = 'symmetric_RNA_internal_loop' OR cvterm.name = 'K_turn_RNA_motif' OR cvterm.name = 'sarcin_like_RNA_motif' OR cvterm.name = 'RNA_hook_turn' OR cvterm.name = 'nucleotide_motif';
> 
> --- ************************************************
> --- *** relation: rna_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif that is active in RNA sequence.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna_motif AS
>   SELECT
>     feature_id AS rna_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNA_internal_loop' OR cvterm.name = 'A_minor_RNA_motif' OR cvterm.name = 'RNA_junction_loop' OR cvterm.name = 'hammerhead_ribozyme' OR cvterm.name = 'asymmetric_RNA_internal_loop' OR cvterm.name = 'symmetric_RNA_internal_loop' OR cvterm.name = 'K_turn_RNA_motif' OR cvterm.name = 'sarcin_like_RNA_motif' OR cvterm.name = 'RNA_hook_turn' OR cvterm.name = 'RNA_motif';
> 
> --- ************************************************
> --- *** relation: dicistronic_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA that has the quality dicistronic ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW dicistronic_mrna AS
>   SELECT
>     feature_id AS dicistronic_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dicistronic_mRNA';
> 
> --- ************************************************
> --- *** relation: reading_frame ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A nucleic acid sequence that when read a ***
> --- *** s sequential triplets, has the potential ***
> --- ***  of encoding a sequential string of amin ***
> --- *** o acids. It need not contain the start o ***
> --- *** r stop codon.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW reading_frame AS
>   SELECT
>     feature_id AS reading_frame_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ORF' OR cvterm.name = 'blocked_reading_frame' OR cvterm.name = 'mini_gene' OR cvterm.name = 'rescue_mini_gene' OR cvterm.name = 'reading_frame';
> 
> --- ************************************************
> --- *** relation: blocked_reading_frame ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A reading_frame that is interrupted by o ***
> --- *** ne or more stop codons; usually identifi ***
> --- *** ed through intergenomic sequence compari ***
> --- *** sons.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW blocked_reading_frame AS
>   SELECT
>     feature_id AS blocked_reading_frame_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'blocked_reading_frame';
> 
> --- ************************************************
> --- *** relation: ultracontig ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An ordered and oriented set of scaffolds ***
> --- ***  based on somewhat weaker sets of infere ***
> --- *** ntial evidence such as one set of mate p ***
> --- *** air reads together with supporting evide ***
> --- *** nce from ESTs or location of markers fro ***
> --- *** m SNP or microsatellite maps, or cytogen ***
> --- *** etic localization of contained markers.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW ultracontig AS
>   SELECT
>     feature_id AS ultracontig_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ultracontig';
> 
> --- ************************************************
> --- *** relation: foreign_transposable_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transposable element that is foreign.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW foreign_transposable_element AS
>   SELECT
>     feature_id AS foreign_transposable_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'foreign_transposable_element';
> 
> --- ************************************************
> --- *** relation: gene_with_dicistronic_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes a dicistronic primar ***
> --- *** y transcript.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_dicistronic_primary_transcript AS
>   SELECT
>     feature_id AS gene_with_dicistronic_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_dicistronic_primary_transcript';
> 
> --- ************************************************
> --- *** relation: gene_with_dicistronic_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that encodes a polycistronic mRNA ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_with_dicistronic_mrna AS
>   SELECT
>     feature_id AS gene_with_dicistronic_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_dicistronic_mRNA';
> 
> --- ************************************************
> --- *** relation: idna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Genomic sequence removed from the genome ***
> --- *** , as a normal event, by a process of rec ***
> --- *** ombination.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW idna AS
>   SELECT
>     feature_id AS idna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'iDNA';
> 
> --- ************************************************
> --- *** relation: orit ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a DNA molecule where transfe ***
> --- *** r is initiated during the process of con ***
> --- *** jugation or mobilization.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW orit AS
>   SELECT
>     feature_id AS orit_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'oriT';
> 
> --- ************************************************
> --- *** relation: transit_peptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The transit_peptide is a short region at ***
> --- ***  the N-terminus of the peptide that dire ***
> --- *** cts the protein to an organelle (chlorop ***
> --- *** last, mitochondrion, microbody or cyanel ***
> --- *** le).                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW transit_peptide AS
>   SELECT
>     feature_id AS transit_peptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transit_peptide';
> 
> --- ************************************************
> --- *** relation: repeat_unit ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The simplest repeated component of a rep ***
> --- *** eat region. A single repeat.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW repeat_unit AS
>   SELECT
>     feature_id AS repeat_unit_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'repeat_unit';
> 
> --- ************************************************
> --- *** relation: crm ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A regulatory_region where more than 1 TF ***
> --- *** _binding_site together are regulatorily  ***
> --- *** active.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW crm AS
>   SELECT
>     feature_id AS crm_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'locus_control_region' OR cvterm.name = 'enhancer' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'silencer' OR cvterm.name = 'enhancer_bound_by_factor' OR cvterm.name = 'shadow_enhancer' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'CRM';
> 
> --- ************************************************
> --- *** relation: intein ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a peptide that is able to ex ***
> --- *** cise itself and rejoin the remaining por ***
> --- *** tions with a peptide bond.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW intein AS
>   SELECT
>     feature_id AS intein_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intein';
> 
> --- ************************************************
> --- *** relation: intein_containing ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute of protein-coding genes whe ***
> --- *** re the initial protein product contains  ***
> --- *** an intein.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW intein_containing AS
>   SELECT
>     feature_id AS intein_containing_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intein_containing';
> 
> --- ************************************************
> --- *** relation: gap ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gap in the sequence of known length. T ***
> --- *** he unknown bases are filled in with N's. ***
> --- ************************************************
> ---
> 
> CREATE VIEW gap AS
>   SELECT
>     feature_id AS gap_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gap';
> 
> --- ************************************************
> --- *** relation: fragmentary ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a feature that  ***
> --- *** is incomplete.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW fragmentary AS
>   SELECT
>     feature_id AS fragmentary_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'fragmentary';
> 
> --- ************************************************
> --- *** relation: predicted ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an unverified re ***
> --- *** gion.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW predicted AS
>   SELECT
>     feature_id AS predicted_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'supported_by_sequence_similarity' OR cvterm.name = 'orphan' OR cvterm.name = 'predicted_by_ab_initio_computation' OR cvterm.name = 'supported_by_domain_match' OR cvterm.name = 'supported_by_EST_or_cDNA' OR cvterm.name = 'predicted';
> 
> --- ************************************************
> --- *** relation: feature_attribute ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a located_sequen ***
> --- *** ce_feature.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW feature_attribute AS
>   SELECT
>     feature_id AS feature_attribute_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcript_attribute' OR cvterm.name = 'bound_by_factor' OR cvterm.name = 'flanked' OR cvterm.name = 'gene_attribute' OR cvterm.name = 'retrotransposed' OR cvterm.name = 'transgenic' OR cvterm.name = 'natural' OR cvterm.name = 'engineered' OR cvterm.name = 'foreign' OR cvterm.name = 'fusion' OR cvterm.name = 'rescue' OR cvterm.name = 'wild_type' OR cvterm.name = 'conserved' OR cvterm.name = 'status' OR cvterm.name = 'intermediate' OR cvterm.name = 'recombinationally_rearranged' OR cvterm.name = 'cryptic' OR cvterm.name = 'strand_attribute' OR cvterm.name = 'direction_attribute' OR cvterm.name = 'enzymatic' OR cvterm.name = 'mobile' OR cvterm.name = 'edited' OR cvterm.name = 'capped' OR cvterm.name = 'mRNA_attribute' OR cvterm.name = 'trans_spliced' OR cvterm.name = 'alternatively_spliced' OR cvterm.name = 'monocistronic' OR cvterm.name = 'polycistronic' OR cvterm.name = 'polyadenylated' OR cvterm.name = 'exemplar' OR cvterm.name = 'frameshift' OR cvterm.name = 'recoded' OR cvterm.name = 'minus_1_frameshift' OR cvterm.name = 'minus_2_frameshift' OR cvterm.name = 'plus_1_frameshift' OR cvterm.name = 'plus_2_framshift' OR cvterm.name = 'codon_redefined' OR cvterm.name = 'recoded_by_translational_bypass' OR cvterm.name = 'translationally_frameshifted' OR cvterm.name = 'minus_1_translationally_frameshifted' OR cvterm.name = 'plus_1_translationally_frameshifted' OR cvterm.name = 'dicistronic' OR cvterm.name = 'bound_by_protein' OR cvterm.name = 'bound_by_nucleic_acid' OR cvterm.name = 'floxed' OR cvterm.name = 'FRT_flanked' OR cvterm.name = 'protein_coding' OR cvterm.name = 'non_protein_coding' OR cvterm.name = 'gene_to_gene_feature' OR cvterm.name = 'gene_array_member' OR cvterm.name = 'regulated' OR cvterm.name = 'epigenetically_modified' OR cvterm.name = 'encodes_alternately_spliced_transcripts' OR cvterm.name = 'encodes_alternate_transcription_start_sites' OR cvterm.name = 'intein_containing' OR cvterm.name = 'miRNA_encoding' OR cvterm.name = 'rRNA_encoding' OR cvterm.name = 'scRNA_encoding' OR cvterm.name = 'snoRNA_encoding' OR cvterm.name = 'snRNA_encoding' OR cvterm.name = 'SRP_RNA_encoding' OR cvterm.name = 'stRNA_encoding' OR cvterm.name = 'tmRNA_encoding' OR cvterm.name = 'tRNA_encoding' OR cvterm.name = 'gRNA_encoding' OR cvterm.name = 'C_D_box_snoRNA_encoding' OR cvterm.name = 'H_ACA_box_snoRNA_encoding' OR cvterm.name = 'overlapping' OR cvterm.name = 'inside_intron' OR cvterm.name = 'five_prime_three_prime_overlap' OR cvterm.name = 'five_prime_five_prime_overlap' OR cvterm.name = 'three_prime_three_prime_overlap' OR cvterm.name = 'three_prime_five_prime_overlap' OR cvterm.name = 'antisense' OR cvterm.name = 'inside_intron_antiparallel' OR cvterm.name = 'inside_intron_parallel' OR cvterm.name = 'operon_member' OR cvterm.name = 'gene_cassette_member' OR cvterm.name = 'gene_subarray_member' OR cvterm.name = 'member_of_regulon' OR cvterm.name = 'cassette_array_member' OR cvterm.name = 'transcriptionally_regulated' OR cvterm.name = 'post_translationally_regulated' OR cvterm.name = 'translationally_regulated' OR cvterm.name = 'imprinted' OR cvterm.name = 'transcriptionally_constitutive' OR cvterm.name = 'transcriptionally_induced' OR cvterm.name = 'transcriptionally_repressed' OR cvterm.name = 'autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'silenced' OR cvterm.name = 'silenced_by_DNA_modification' OR cvterm.name = 'silenced_by_RNA_interference' OR cvterm.name = 'silenced_by_histone_modification' OR cvterm.name = 'silenced_by_DNA_methylation' OR cvterm.name = 'silenced_by_histone_methylation' OR cvterm.name = 'silenced_by_histone_deacetylation' OR cvterm.name = 'negatively_autoregulated' OR cvterm.name = 'positively_autoregulated' OR cvterm.name = 'post_translationally_regulated_by_protein_stability' OR cvterm.name = 'post_translationally_regulated_by_protein_modification' OR cvterm.name = 'maternally_imprinted' OR cvterm.name = 'paternally_imprinted' OR cvterm.name = 'imprinted' OR cvterm.name = 'allelically_excluded' OR cvterm.name = 'rearranged_at_DNA_level' OR cvterm.name = 'maternally_imprinted' OR cvterm.name = 'paternally_imprinted' OR cvterm.name = 'encodes_1_polypeptide' OR cvterm.name = 'encodes_greater_than_1_polypeptide' OR cvterm.name = 'encodes_disjoint_polypeptides' OR cvterm.name = 'encodes_overlapping_peptides' OR cvterm.name = 'encodes_different_polypeptides_different_stop' OR cvterm.name = 'encodes_overlapping_peptides_different_start' OR cvterm.name = 'encodes_overlapping_polypeptides_different_start_and_stop' OR cvterm.name = 'homologous' OR cvterm.name = 'syntenic' OR cvterm.name = 'orthologous' OR cvterm.name = 'paralogous' OR cvterm.name = 'fragmentary' OR cvterm.name = 'predicted' OR cvterm.name = 'validated' OR cvterm.name = 'invalidated' OR cvterm.name = 'independently_known' OR cvterm.name = 'consensus' OR cvterm.name = 'low_complexity' OR cvterm.name = 'supported_by_sequence_similarity' OR cvterm.name = 'orphan' OR cvterm.name = 'predicted_by_ab_initio_computation' OR cvterm.name = 'supported_by_domain_match' OR cvterm.name = 'supported_by_EST_or_cDNA' OR cvterm.name = 'experimentally_determined' OR cvterm.name = 'invalidated_by_chimeric_cDNA' OR cvterm.name = 'invalidated_by_genomic_contamination' OR cvterm.name = 'invalidated_by_genomic_polyA_primed_cDNA' OR cvterm.name = 'invalidated_by_partial_processing' OR cvterm.name = 'single' OR cvterm.name = 'double' OR cvterm.name = 'forward' OR cvterm.name = 'reverse' OR cvterm.name = 'ribozymic' OR cvterm.name = 'feature_attribute';
> 
> --- ************************************************
> --- *** relation: exemplar_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An exemplar is a representative cDNA seq ***
> --- *** uence for each gene. The exemplar approa ***
> --- *** ch is a method that usually involves som ***
> --- *** e initial clustering into gene groups an ***
> --- *** d the subsequent selection of a represen ***
> --- *** tative from each gene group.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW exemplar_mrna AS
>   SELECT
>     feature_id AS exemplar_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'exemplar_mRNA';
> 
> --- ************************************************
> --- *** relation: sequence_location ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_location AS
>   SELECT
>     feature_id AS sequence_location_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'organelle_sequence' OR cvterm.name = 'plasmid_location' OR cvterm.name = 'proviral_location' OR cvterm.name = 'macronuclear_sequence' OR cvterm.name = 'micronuclear_sequence' OR cvterm.name = 'mitochondrial_sequence' OR cvterm.name = 'nuclear_sequence' OR cvterm.name = 'nucleomorphic_sequence' OR cvterm.name = 'plastid_sequence' OR cvterm.name = 'mitochondrial_DNA' OR cvterm.name = 'apicoplast_sequence' OR cvterm.name = 'chromoplast_sequence' OR cvterm.name = 'chloroplast_sequence' OR cvterm.name = 'cyanelle_sequence' OR cvterm.name = 'leucoplast_sequence' OR cvterm.name = 'proplastid_sequence' OR cvterm.name = 'chloroplast_DNA' OR cvterm.name = 'endogenous_retroviral_sequence' OR cvterm.name = 'sequence_location';
> 
> --- ************************************************
> --- *** relation: organelle_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW organelle_sequence AS
>   SELECT
>     feature_id AS organelle_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'macronuclear_sequence' OR cvterm.name = 'micronuclear_sequence' OR cvterm.name = 'mitochondrial_sequence' OR cvterm.name = 'nuclear_sequence' OR cvterm.name = 'nucleomorphic_sequence' OR cvterm.name = 'plastid_sequence' OR cvterm.name = 'mitochondrial_DNA' OR cvterm.name = 'apicoplast_sequence' OR cvterm.name = 'chromoplast_sequence' OR cvterm.name = 'chloroplast_sequence' OR cvterm.name = 'cyanelle_sequence' OR cvterm.name = 'leucoplast_sequence' OR cvterm.name = 'proplastid_sequence' OR cvterm.name = 'chloroplast_DNA' OR cvterm.name = 'organelle_sequence';
> 
> --- ************************************************
> --- *** relation: mitochondrial_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW mitochondrial_sequence AS
>   SELECT
>     feature_id AS mitochondrial_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mitochondrial_DNA' OR cvterm.name = 'mitochondrial_sequence';
> 
> --- ************************************************
> --- *** relation: nuclear_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW nuclear_sequence AS
>   SELECT
>     feature_id AS nuclear_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nuclear_sequence';
> 
> --- ************************************************
> --- *** relation: nucleomorphic_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW nucleomorphic_sequence AS
>   SELECT
>     feature_id AS nucleomorphic_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nucleomorphic_sequence';
> 
> --- ************************************************
> --- *** relation: plastid_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW plastid_sequence AS
>   SELECT
>     feature_id AS plastid_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'apicoplast_sequence' OR cvterm.name = 'chromoplast_sequence' OR cvterm.name = 'chloroplast_sequence' OR cvterm.name = 'cyanelle_sequence' OR cvterm.name = 'leucoplast_sequence' OR cvterm.name = 'proplastid_sequence' OR cvterm.name = 'chloroplast_DNA' OR cvterm.name = 'plastid_sequence';
> 
> --- ************************************************
> --- *** relation: kinetoplast ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A kinetoplast is an interlocked network  ***
> --- *** of thousands of minicircles and tens of  ***
> --- *** maxi circles, located near the base of t ***
> --- *** he flagellum of some protozoan species.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW kinetoplast AS
>   SELECT
>     feature_id AS kinetoplast_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'kinetoplast';
> 
> --- ************************************************
> --- *** relation: maxicircle ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A maxicircle is a replicon, part of a ki ***
> --- *** netoplast, that contains open reading fr ***
> --- *** ames and replicates via a rolling circle ***
> --- ***  method.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW maxicircle AS
>   SELECT
>     feature_id AS maxicircle_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'maxicircle';
> 
> --- ************************************************
> --- *** relation: apicoplast_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW apicoplast_sequence AS
>   SELECT
>     feature_id AS apicoplast_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'apicoplast_sequence';
> 
> --- ************************************************
> --- *** relation: chromoplast_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromoplast_sequence AS
>   SELECT
>     feature_id AS chromoplast_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromoplast_sequence';
> 
> --- ************************************************
> --- *** relation: chloroplast_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chloroplast_sequence AS
>   SELECT
>     feature_id AS chloroplast_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chloroplast_DNA' OR cvterm.name = 'chloroplast_sequence';
> 
> --- ************************************************
> --- *** relation: cyanelle_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW cyanelle_sequence AS
>   SELECT
>     feature_id AS cyanelle_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cyanelle_sequence';
> 
> --- ************************************************
> --- *** relation: leucoplast_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW leucoplast_sequence AS
>   SELECT
>     feature_id AS leucoplast_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'leucoplast_sequence';
> 
> --- ************************************************
> --- *** relation: proplastid_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW proplastid_sequence AS
>   SELECT
>     feature_id AS proplastid_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'proplastid_sequence';
> 
> --- ************************************************
> --- *** relation: plasmid_location ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW plasmid_location AS
>   SELECT
>     feature_id AS plasmid_location_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plasmid_location';
> 
> --- ************************************************
> --- *** relation: amplification_origin ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An origin_of_replication that is used fo ***
> --- *** r the amplification of a chromosomal nuc ***
> --- *** leic acid sequence.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW amplification_origin AS
>   SELECT
>     feature_id AS amplification_origin_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'amplification_origin';
> 
> --- ************************************************
> --- *** relation: proviral_location ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW proviral_location AS
>   SELECT
>     feature_id AS proviral_location_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'endogenous_retroviral_sequence' OR cvterm.name = 'proviral_location';
> 
> --- ************************************************
> --- *** relation: gene_group_regulatory_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_group_regulatory_region AS
>   SELECT
>     feature_id AS gene_group_regulatory_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'operator' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'gene_group_regulatory_region';
> 
> --- ************************************************
> --- *** relation: clone_insert ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of sequence that has been ins ***
> --- *** erted and is being propogated by the clo ***
> --- *** ne.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW clone_insert AS
>   SELECT
>     feature_id AS clone_insert_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cloned_cDNA_insert' OR cvterm.name = 'cloned_genomic_insert' OR cvterm.name = 'engineered_insert' OR cvterm.name = 'BAC_cloned_genomic_insert' OR cvterm.name = 'clone_insert';
> 
> --- ************************************************
> --- *** relation: lambda_vector ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The lambda bacteriophage is the vector f ***
> --- *** or the linear lambda clone. The genes in ***
> --- *** volved in the lysogenic pathway are remo ***
> --- *** ved from the from the viral DNA. Up to 2 ***
> --- *** 5 kb of foreign DNA can then be inserted ***
> --- ***  into the lambda genome.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW lambda_vector AS
>   SELECT
>     feature_id AS lambda_vector_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'lambda_vector';
> 
> --- ************************************************
> --- *** relation: plasmid_vector ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW plasmid_vector AS
>   SELECT
>     feature_id AS plasmid_vector_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plasmid_vector';
> 
> --- ************************************************
> --- *** relation: cdna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** DNA synthesized by reverse transcriptase ***
> --- ***  using RNA as a template.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW cdna AS
>   SELECT
>     feature_id AS cdna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'single_stranded_cDNA' OR cvterm.name = 'double_stranded_cDNA' OR cvterm.name = 'cDNA';
> 
> --- ************************************************
> --- *** relation: single_stranded_cdna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW single_stranded_cdna AS
>   SELECT
>     feature_id AS single_stranded_cdna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'single_stranded_cDNA';
> 
> --- ************************************************
> --- *** relation: double_stranded_cdna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW double_stranded_cdna AS
>   SELECT
>     feature_id AS double_stranded_cdna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'double_stranded_cDNA';
> 
> --- ************************************************
> --- *** relation: pyrrolysyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a pyrrolysine a ***
> --- *** nticodon, and a 3' pyrrolysine binding r ***
> --- *** egion.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW pyrrolysyl_trna AS
>   SELECT
>     feature_id AS pyrrolysyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pyrrolysyl_tRNA';
> 
> --- ************************************************
> --- *** relation: episome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A plasmid that may integrate with a chro ***
> --- *** mosome.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW episome AS
>   SELECT
>     feature_id AS episome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_episome' OR cvterm.name = 'episome';
> 
> --- ************************************************
> --- *** relation: tmrna_coding_piece ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of a two-piece tmRNA that bea ***
> --- *** rs the reading frame encoding the proteo ***
> --- *** lysis tag. The tmRNA gene undergoes circ ***
> --- *** ular permutation in some groups of bacte ***
> --- *** ria. Processing of the transcripts from  ***
> --- *** such a gene leaves the mature tmRNA in t ***
> --- *** wo pieces, base-paired together.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW tmrna_coding_piece AS
>   SELECT
>     feature_id AS tmrna_coding_piece_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tmRNA_coding_piece';
> 
> --- ************************************************
> --- *** relation: tmrna_acceptor_piece ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The acceptor region of a two-piece tmRNA ***
> --- ***  that when mature is charged at its 3' e ***
> --- *** nd with alanine. The tmRNA gene undergoe ***
> --- *** s circular permutation in some groups of ***
> --- ***  bacteria; processing of the transcripts ***
> --- ***  from such a gene leaves the mature tmRN ***
> --- *** A in two pieces, base-paired together.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW tmrna_acceptor_piece AS
>   SELECT
>     feature_id AS tmrna_acceptor_piece_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tmRNA_acceptor_piece';
> 
> --- ************************************************
> --- *** relation: qtl ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A quantitative trait locus (QTL) is a po ***
> --- *** lymorphic locus which contains alleles t ***
> --- *** hat differentially affect the expression ***
> --- ***  of a continuously distributed phenotypi ***
> --- *** c trait. Usually it is a marker describe ***
> --- *** d by statistical association to quantita ***
> --- *** tive variation in the particular phenoty ***
> --- *** pic trait that is thought to be controll ***
> --- *** ed by the cumulative action of alleles a ***
> --- *** t multiple loci.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW qtl AS
>   SELECT
>     feature_id AS qtl_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'QTL';
> 
> --- ************************************************
> --- *** relation: genomic_island ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A genomic island is an integrated mobile ***
> --- ***  genetic element, characterized by size  ***
> --- *** (over 10 Kb). It that has features that  ***
> --- *** suggest a foreign origin. These can incl ***
> --- *** ude nucleotide distribution (oligonucleo ***
> --- *** tides signature, CG content etc.) that d ***
> --- *** iffers from the bulk of the chromosome a ***
> --- *** nd/or genes suggesting DNA mobility.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW genomic_island AS
>   SELECT
>     feature_id AS genomic_island_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pathogenic_island' OR cvterm.name = 'metabolic_island' OR cvterm.name = 'adaptive_island' OR cvterm.name = 'symbiosis_island' OR cvterm.name = 'cryptic_prophage' OR cvterm.name = 'defective_conjugative_transposon' OR cvterm.name = 'genomic_island';
> 
> --- ************************************************
> --- *** relation: pathogenic_island ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Mobile genetic elements that contribute  ***
> --- *** to rapid changes in virulence potential. ***
> --- ***  They are present on the genomes of path ***
> --- *** ogenic strains but absent from the genom ***
> --- *** es of non pathogenic members of the same ***
> --- ***  or related species.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW pathogenic_island AS
>   SELECT
>     feature_id AS pathogenic_island_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pathogenic_island';
> 
> --- ************************************************
> --- *** relation: metabolic_island ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transmissible element containing genes ***
> --- ***  involved in metabolism, analogous to th ***
> --- *** e pathogenicity islands of gram negative ***
> --- ***  bacteria.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW metabolic_island AS
>   SELECT
>     feature_id AS metabolic_island_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'metabolic_island';
> 
> --- ************************************************
> --- *** relation: adaptive_island ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An adaptive island is a genomic island t ***
> --- *** hat provides an adaptive advantage to th ***
> --- *** e host.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW adaptive_island AS
>   SELECT
>     feature_id AS adaptive_island_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'adaptive_island';
> 
> --- ************************************************
> --- *** relation: symbiosis_island ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transmissible element containing genes ***
> --- ***  involved in symbiosis, analogous to the ***
> --- ***  pathogenicity islands of gram negative  ***
> --- *** bacteria.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW symbiosis_island AS
>   SELECT
>     feature_id AS symbiosis_island_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'symbiosis_island';
> 
> --- ************************************************
> --- *** relation: pseudogenic_rrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non functional descendent of an rRNA.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudogenic_rrna AS
>   SELECT
>     feature_id AS pseudogenic_rrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pseudogenic_rRNA';
> 
> --- ************************************************
> --- *** relation: pseudogenic_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non functional descendent of a tRNA.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudogenic_trna AS
>   SELECT
>     feature_id AS pseudogenic_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pseudogenic_tRNA';
> 
> --- ************************************************
> --- *** relation: engineered_episome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An episome that is engineered.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_episome AS
>   SELECT
>     feature_id AS engineered_episome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_episome';
> 
> --- ************************************************
> --- *** relation: transgenic ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Attribute describing sequence that has b ***
> --- *** een integrated with foreign sequence.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW transgenic AS
>   SELECT
>     feature_id AS transgenic_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transgenic';
> 
> --- ************************************************
> --- *** relation: so_natural ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a feature that o ***
> --- *** ccurs in nature.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW so_natural AS
>   SELECT
>     feature_id AS so_natural_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'natural';
> 
> --- ************************************************
> --- *** relation: engineered ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a region that w ***
> --- *** as modified in vitro.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered AS
>   SELECT
>     feature_id AS engineered_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered';
> 
> --- ************************************************
> --- *** relation: so_foreign ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a region from a ***
> --- *** nother species.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW so_foreign AS
>   SELECT
>     feature_id AS so_foreign_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'foreign';
> 
> --- ************************************************
> --- *** relation: cloned_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW cloned_region AS
>   SELECT
>     feature_id AS cloned_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cloned_region';
> 
> --- ************************************************
> --- *** relation: validated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a feature that  ***
> --- *** has been proven.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW validated AS
>   SELECT
>     feature_id AS validated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'experimentally_determined' OR cvterm.name = 'validated';
> 
> --- ************************************************
> --- *** relation: invalidated ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a feature that i ***
> --- *** s invalidated.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW invalidated AS
>   SELECT
>     feature_id AS invalidated_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'invalidated_by_chimeric_cDNA' OR cvterm.name = 'invalidated_by_genomic_contamination' OR cvterm.name = 'invalidated_by_genomic_polyA_primed_cDNA' OR cvterm.name = 'invalidated_by_partial_processing' OR cvterm.name = 'invalidated';
> 
> --- ************************************************
> --- *** relation: engineered_rescue_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A rescue region that is engineered.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_rescue_region AS
>   SELECT
>     feature_id AS engineered_rescue_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_rescue_region';
> 
> --- ************************************************
> --- *** relation: rescue_mini_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mini_gene that rescues.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW rescue_mini_gene AS
>   SELECT
>     feature_id AS rescue_mini_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rescue_mini_gene';
> 
> --- ************************************************
> --- *** relation: transgenic_transposable_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** TE that has been modified in vitro, incl ***
> --- *** uding insertion of DNA derived from a so ***
> --- *** urce other than the originating TE.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW transgenic_transposable_element AS
>   SELECT
>     feature_id AS transgenic_transposable_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transgenic_transposable_element';
> 
> --- ************************************************
> --- *** relation: natural_transposable_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** TE that exists (or existed) in nature.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW natural_transposable_element AS
>   SELECT
>     feature_id AS natural_transposable_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'natural_transposable_element';
> 
> --- ************************************************
> --- *** relation: engineered_transposable_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** TE that has been modified by manipulatio ***
> --- *** ns in vitro.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_transposable_element AS
>   SELECT
>     feature_id AS engineered_transposable_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_transposable_element';
> 
> --- ************************************************
> --- *** relation: engineered_foreign_transposable_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transposable_element that is engineere ***
> --- *** d and foreign.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_foreign_transposable_element AS
>   SELECT
>     feature_id AS engineered_foreign_transposable_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_transposable_element';
> 
> --- ************************************************
> --- *** relation: assortment_derived_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A multi-chromosome duplication aberratio ***
> --- *** n generated by reassortment of other abe ***
> --- *** rration components.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW assortment_derived_duplication AS
>   SELECT
>     feature_id AS assortment_derived_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'assortment_derived_duplication';
> 
> --- ************************************************
> --- *** relation: assortment_derived_deficiency_plus_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A multi-chromosome aberration generated  ***
> --- *** by reassortment of other aberration comp ***
> --- *** onents; presumed to have a deficiency an ***
> --- *** d a duplication.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW assortment_derived_deficiency_plus_duplication AS
>   SELECT
>     feature_id AS assortment_derived_deficiency_plus_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'assortment_derived_deficiency_plus_duplication';
> 
> --- ************************************************
> --- *** relation: assortment_derived_deficiency ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A multi-chromosome deficiency aberration ***
> --- ***  generated by reassortment of other aber ***
> --- *** ration components.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW assortment_derived_deficiency AS
>   SELECT
>     feature_id AS assortment_derived_deficiency_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'assortment_derived_deficiency';
> 
> --- ************************************************
> --- *** relation: assortment_derived_aneuploid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A multi-chromosome aberration generated  ***
> --- *** by reassortment of other aberration comp ***
> --- *** onents; presumed to have a deficiency or ***
> --- ***  a duplication.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW assortment_derived_aneuploid AS
>   SELECT
>     feature_id AS assortment_derived_aneuploid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'assortment_derived_aneuploid';
> 
> --- ************************************************
> --- *** relation: engineered_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region that is engineered.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_region AS
>   SELECT
>     feature_id AS engineered_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_gene' OR cvterm.name = 'engineered_plasmid' OR cvterm.name = 'engineered_rescue_region' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'engineered_foreign_region' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'engineered_insert' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_repetitive_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_region';
> 
> --- ************************************************
> --- *** relation: engineered_foreign_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region that is engineered and foreign. ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_foreign_region AS
>   SELECT
>     feature_id AS engineered_foreign_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_repetitive_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_foreign_region';
> 
> --- ************************************************
> --- *** relation: fusion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW fusion AS
>   SELECT
>     feature_id AS fusion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'fusion';
> 
> --- ************************************************
> --- *** relation: engineered_tag ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tag that is engineered.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_tag AS
>   SELECT
>     feature_id AS engineered_tag_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_tag';
> 
> --- ************************************************
> --- *** relation: validated_cdna_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cDNA clone that has been validated.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW validated_cdna_clone AS
>   SELECT
>     feature_id AS validated_cdna_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'validated_cDNA_clone';
> 
> --- ************************************************
> --- *** relation: invalidated_cdna_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cDNA clone that is invalid.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW invalidated_cdna_clone AS
>   SELECT
>     feature_id AS invalidated_cdna_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chimeric_cDNA_clone' OR cvterm.name = 'genomically_contaminated_cDNA_clone' OR cvterm.name = 'polyA_primed_cDNA_clone' OR cvterm.name = 'partially_processed_cDNA_clone' OR cvterm.name = 'invalidated_cDNA_clone';
> 
> --- ************************************************
> --- *** relation: chimeric_cdna_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cDNA clone invalidated because it is c ***
> --- *** himeric.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW chimeric_cdna_clone AS
>   SELECT
>     feature_id AS chimeric_cdna_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chimeric_cDNA_clone';
> 
> --- ************************************************
> --- *** relation: genomically_contaminated_cdna_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cDNA clone invalidated by genomic cont ***
> --- *** amination.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW genomically_contaminated_cdna_clone AS
>   SELECT
>     feature_id AS genomically_contaminated_cdna_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'genomically_contaminated_cDNA_clone';
> 
> --- ************************************************
> --- *** relation: polya_primed_cdna_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cDNA clone invalidated by polyA primin ***
> --- *** g.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW polya_primed_cdna_clone AS
>   SELECT
>     feature_id AS polya_primed_cdna_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polyA_primed_cDNA_clone';
> 
> --- ************************************************
> --- *** relation: partially_processed_cdna_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cDNA invalidated clone by partial proc ***
> --- *** essing.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW partially_processed_cdna_clone AS
>   SELECT
>     feature_id AS partially_processed_cdna_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'partially_processed_cDNA_clone';
> 
> --- ************************************************
> --- *** relation: rescue ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a region's abili ***
> --- *** ty, when introduced to a mutant organism ***
> --- *** , to re-establish (rescue) a phenotype.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW rescue AS
>   SELECT
>     feature_id AS rescue_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rescue';
> 
> --- ************************************************
> --- *** relation: mini_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** By definition, minigenes are short open- ***
> --- *** reading frames (ORF), usually encoding a ***
> --- *** pproximately 9 to 20 amino acids, which  ***
> --- *** are expressed in vivo (as distinct from  ***
> --- *** being synthesized as peptide or protein  ***
> --- *** ex vivo and subsequently injected). The  ***
> --- *** in vivo synthesis confers a distinct adv ***
> --- *** antage: the expressed sequences can ente ***
> --- *** r both antigen presentation pathways, MH ***
> --- *** C I (inducing CD8+ T- cells, which are u ***
> --- *** sually cytotoxic T-lymphocytes (CTL)) an ***
> --- *** d MHC II (inducing CD4+ T-cells, usually ***
> --- ***  'T-helpers' (Th)); and can encounter B- ***
> --- *** cells, inducing antibody responses. Thre ***
> --- *** e main vector approaches have been used  ***
> --- *** to deliver minigenes: viral vectors, bac ***
> --- *** terial vectors and plasmid DNA.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW mini_gene AS
>   SELECT
>     feature_id AS mini_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rescue_mini_gene' OR cvterm.name = 'mini_gene';
> 
> --- ************************************************
> --- *** relation: rescue_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that rescues.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW rescue_gene AS
>   SELECT
>     feature_id AS rescue_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'wild_type_rescue_gene' OR cvterm.name = 'rescue_gene';
> 
> --- ************************************************
> --- *** relation: wild_type ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing sequence with th ***
> --- *** e genotype found in nature and/or standa ***
> --- *** rd laboratory stock.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW wild_type AS
>   SELECT
>     feature_id AS wild_type_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'wild_type';
> 
> --- ************************************************
> --- *** relation: wild_type_rescue_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that rescues.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW wild_type_rescue_gene AS
>   SELECT
>     feature_id AS wild_type_rescue_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'wild_type_rescue_gene';
> 
> --- ************************************************
> --- *** relation: mitochondrial_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome originating in a mitochondr ***
> --- *** ia.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW mitochondrial_chromosome AS
>   SELECT
>     feature_id AS mitochondrial_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mitochondrial_chromosome';
> 
> --- ************************************************
> --- *** relation: chloroplast_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome originating in a chloroplas ***
> --- *** t.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW chloroplast_chromosome AS
>   SELECT
>     feature_id AS chloroplast_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chloroplast_chromosome';
> 
> --- ************************************************
> --- *** relation: chromoplast_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome originating in a chromoplas ***
> --- *** t.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromoplast_chromosome AS
>   SELECT
>     feature_id AS chromoplast_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromoplast_chromosome';
> 
> --- ************************************************
> --- *** relation: cyanelle_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome originating in a cyanelle.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW cyanelle_chromosome AS
>   SELECT
>     feature_id AS cyanelle_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cyanelle_chromosome';
> 
> --- ************************************************
> --- *** relation: leucoplast_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome with origin in a leucoplast ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW leucoplast_chromosome AS
>   SELECT
>     feature_id AS leucoplast_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'leucoplast_chromosome';
> 
> --- ************************************************
> --- *** relation: macronuclear_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome originating in a macronucle ***
> --- *** us.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW macronuclear_chromosome AS
>   SELECT
>     feature_id AS macronuclear_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'macronuclear_chromosome';
> 
> --- ************************************************
> --- *** relation: micronuclear_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome originating in a micronucle ***
> --- *** us.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW micronuclear_chromosome AS
>   SELECT
>     feature_id AS micronuclear_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'micronuclear_chromosome';
> 
> --- ************************************************
> --- *** relation: nuclear_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome originating in a nucleus.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW nuclear_chromosome AS
>   SELECT
>     feature_id AS nuclear_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nuclear_chromosome';
> 
> --- ************************************************
> --- *** relation: nucleomorphic_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome originating in a nucleomorp ***
> --- *** h.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW nucleomorphic_chromosome AS
>   SELECT
>     feature_id AS nucleomorphic_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nucleomorphic_chromosome';
> 
> --- ************************************************
> --- *** relation: chromosome_part ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a chromosome.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome_part AS
>   SELECT
>     feature_id AS chromosome_part_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromosome_arm' OR cvterm.name = 'chromosome_band' OR cvterm.name = 'interband' OR cvterm.name = 'chromosomal_regulatory_element' OR cvterm.name = 'chromosomal_structural_element' OR cvterm.name = 'introgressed_chromosome_region' OR cvterm.name = 'matrix_attachment_site' OR cvterm.name = 'centromere' OR cvterm.name = 'telomere' OR cvterm.name = 'chromosome_part';
> 
> --- ************************************************
> --- *** relation: gene_member_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a gene.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_member_region AS
>   SELECT
>     feature_id AS gene_member_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcript' OR cvterm.name = 'regulatory_region' OR cvterm.name = 'polycistronic_transcript' OR cvterm.name = 'transcript_with_translational_frameshift' OR cvterm.name = 'primary_transcript' OR cvterm.name = 'mature_transcript' OR cvterm.name = 'transcript_bound_by_nucleic_acid' OR cvterm.name = 'transcript_bound_by_protein' OR cvterm.name = 'enzymatic_RNA' OR cvterm.name = 'trans_spliced_transcript' OR cvterm.name = 'monocistronic_transcript' OR cvterm.name = 'aberrant_processed_transcript' OR cvterm.name = 'edited_transcript' OR cvterm.name = 'alternatively_spliced_transcript' OR cvterm.name = 'dicistronic_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'protein_coding_primary_transcript' OR cvterm.name = 'nc_primary_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'mini_exon_donor_RNA' OR cvterm.name = 'antisense_primary_transcript' OR cvterm.name = 'capped_primary_transcript' OR cvterm.name = 'pre_edited_mRNA' OR cvterm.name = 'scRNA_primary_transcript' OR cvterm.name = 'rRNA_primary_transcript' OR cvterm.name = 'tRNA_primary_transcript' OR cvterm.name = 'snRNA_primary_transcript' OR cvterm.name = 'snoRNA_primary_transcript' OR cvterm.name = 'tmRNA_primary_transcript' OR cvterm.name = 'SRP_RNA_primary_transcript' OR cvterm.name = 'miRNA_primary_transcript' OR cvterm.name = 'rRNA_small_subunit_primary_transcript' OR cvterm.name = 'rRNA_large_subunit_primary_transcript' OR cvterm.name = 'alanine_tRNA_primary_transcript' OR cvterm.name = 'arginine_tRNA_primary_transcript' OR cvterm.name = 'asparagine_tRNA_primary_transcript' OR cvterm.name = 'aspartic_acid_tRNA_primary_transcript' OR cvterm.name = 'cysteine_tRNA_primary_transcript' OR cvterm.name = 'glutamic_acid_tRNA_primary_transcript' OR cvterm.name = 'glutamine_tRNA_primary_transcript' OR cvterm.name = 'glycine_tRNA_primary_transcript' OR cvterm.name = 'histidine_tRNA_primary_transcript' OR cvterm.name = 'isoleucine_tRNA_primary_transcript' OR cvterm.name = 'leucine_tRNA_primary_transcript' OR cvterm.name = 'lysine_tRNA_primary_transcript' OR cvterm.name = 'methionine_tRNA_primary_transcript' OR cvterm.name = 'phenylalanine_tRNA_primary_transcript' OR cvterm.name = 'proline_tRNA_primary_transcript' OR cvterm.name = 'serine_tRNA_primary_transcript' OR cvterm.name = 'threonine_tRNA_primary_transcript' OR cvterm.name = 'tryptophan_tRNA_primary_transcript' OR cvterm.name = 'tyrosine_tRNA_primary_transcript' OR cvterm.name = 'valine_tRNA_primary_transcript' OR cvterm.name = 'pyrrolysine_tRNA_primary_transcript' OR cvterm.name = 'selenocysteine_tRNA_primary_transcript' OR cvterm.name = 'methylation_guide_snoRNA_primary_transcript' OR cvterm.name = 'rRNA_cleavage_snoRNA_primary_transcript' OR cvterm.name = 'C_D_box_snoRNA_primary_transcript' OR cvterm.name = 'H_ACA_box_snoRNA_primary_transcript' OR cvterm.name = 'U14_snoRNA_primary_transcript' OR cvterm.name = 'stRNA_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'mRNA' OR cvterm.name = 'ncRNA' OR cvterm.name = 'mRNA_with_frameshift' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'exemplar_mRNA' OR cvterm.name = 'capped_mRNA' OR cvterm.name = 'polyadenylated_mRNA' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'recoded_mRNA' OR cvterm.name = 'mRNA_with_minus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_2_frameshift' OR cvterm.name = 'mRNA_with_minus_2_frameshift' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'mRNA_recoded_by_translational_bypass' OR cvterm.name = 'mRNA_recoded_by_codon_redefinition' OR cvterm.name = 'scRNA' OR cvterm.name = 'rRNA' OR cvterm.name = 'tRNA' OR cvterm.name = 'snRNA' OR cvterm.name = 'snoRNA' OR cvterm.name = 'small_regulatory_ncRNA' OR cvterm.name = 'RNase_MRP_RNA' OR cvterm.name = 'RNase_P_RNA' OR cvterm.name = 'telomerase_RNA' OR cvterm.name = 'vault_RNA' OR cvterm.name = 'Y_RNA' OR cvterm.name = 'rasiRNA' OR cvterm.name = 'SRP_RNA' OR cvterm.name = 'guide_RNA' OR cvterm.name = 'antisense_RNA' OR cvterm.name = 'siRNA' OR cvterm.name = 'stRNA' OR cvterm.name = 'class_II_RNA' OR cvterm.name = 'class_I_RNA' OR cvterm.name = 'piRNA' OR cvterm.name = 'lincRNA' OR cvterm.name = 'rRNA_cleavage_RNA' OR cvterm.name = 'small_subunit_rRNA' OR cvterm.name = 'large_subunit_rRNA' OR cvterm.name = 'rRNA_18S' OR cvterm.name = 'rRNA_16S' OR cvterm.name = 'rRNA_5_8S' OR cvterm.name = 'rRNA_5S' OR cvterm.name = 'rRNA_28S' OR cvterm.name = 'rRNA_23S' OR cvterm.name = 'rRNA_25S' OR cvterm.name = 'rRNA_21S' OR cvterm.name = 'alanyl_tRNA' OR cvterm.name = 'asparaginyl_tRNA' OR cvterm.name = 'aspartyl_tRNA' OR cvterm.name = 'cysteinyl_tRNA' OR cvterm.name = 'glutaminyl_tRNA' OR cvterm.name = 'glutamyl_tRNA' OR cvterm.name = 'glycyl_tRNA' OR cvterm.name = 'histidyl_tRNA' OR cvterm.name = 'isoleucyl_tRNA' OR cvterm.name = 'leucyl_tRNA' OR cvterm.name = 'lysyl_tRNA' OR cvterm.name = 'methionyl_tRNA' OR cvterm.name = 'phenylalanyl_tRNA' OR cvterm.name = 'prolyl_tRNA' OR cvterm.name = 'seryl_tRNA' OR cvterm.name = 'threonyl_tRNA' OR cvterm.name = 'tryptophanyl_tRNA' OR cvterm.name = 'tyrosyl_tRNA' OR cvterm.name = 'valyl_tRNA' OR cvterm.name = 'pyrrolysyl_tRNA' OR cvterm.name = 'arginyl_tRNA' OR cvterm.name = 'selenocysteinyl_tRNA' OR cvterm.name = 'U1_snRNA' OR cvterm.name = 'U2_snRNA' OR cvterm.name = 'U4_snRNA' OR cvterm.name = 'U4atac_snRNA' OR cvterm.name = 'U5_snRNA' OR cvterm.name = 'U6_snRNA' OR cvterm.name = 'U6atac_snRNA' OR cvterm.name = 'U11_snRNA' OR cvterm.name = 'U12_snRNA' OR cvterm.name = 'C_D_box_snoRNA' OR cvterm.name = 'H_ACA_box_snoRNA' OR cvterm.name = 'U14_snoRNA' OR cvterm.name = 'U3_snoRNA' OR cvterm.name = 'methylation_guide_snoRNA' OR cvterm.name = 'pseudouridylation_guide_snoRNA' OR cvterm.name = 'miRNA' OR cvterm.name = 'RNA_6S' OR cvterm.name = 'CsrB_RsmB_RNA' OR cvterm.name = 'DsrA_RNA' OR cvterm.name = 'OxyS_RNA' OR cvterm.name = 'RprA_RNA' OR cvterm.name = 'RRE_RNA' OR cvterm.name = 'spot_42_RNA' OR cvterm.name = 'tmRNA' OR cvterm.name = 'GcvB_RNA' OR cvterm.name = 'MicF_RNA' OR cvterm.name = 'ribozyme' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'edited_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'attenuator' OR cvterm.name = 'terminator' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'polyA_signal_sequence' OR cvterm.name = 'gene_group_regulatory_region' OR cvterm.name = 'transcriptional_cis_regulatory_region' OR cvterm.name = 'splicing_regulatory_region' OR cvterm.name = 'cis_regulatory_frameshift_element' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'eukaryotic_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'terminator_of_type_2_RNApol_III_promoter' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'operator' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'promoter' OR cvterm.name = 'insulator' OR cvterm.name = 'CRM' OR cvterm.name = 'promoter_targeting_sequence' OR cvterm.name = 'bidirectional_promoter' OR cvterm.name = 'RNA_polymerase_promoter' OR cvterm.name = 'RNApol_I_promoter' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'Phage_RNA_Polymerase_Promoter' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'SP6_RNA_Polymerase_Promoter' OR cvterm.name = 'T3_RNA_Polymerase_Promoter' OR cvterm.name = 'T7_RNA_Polymerase_Promoter' OR cvterm.name = 'locus_control_region' OR cvterm.name = 'enhancer' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'silencer' OR cvterm.name = 'enhancer_bound_by_factor' OR cvterm.name = 'shadow_enhancer' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'splice_enhancer' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'exonic_splice_enhancer' OR cvterm.name = 'gene_member_region';
> 
> --- ************************************************
> --- *** relation: transcript_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a transcript.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcript_region AS
>   SELECT
>     feature_id AS transcript_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'exon' OR cvterm.name = 'edited_transcript_feature' OR cvterm.name = 'mature_transcript_region' OR cvterm.name = 'primary_transcript_region' OR cvterm.name = 'exon_region' OR cvterm.name = 'anchor_binding_site' OR cvterm.name = 'coding_exon' OR cvterm.name = 'noncoding_exon' OR cvterm.name = 'interior_exon' OR cvterm.name = 'exon_of_single_exon_gene' OR cvterm.name = 'interior_coding_exon' OR cvterm.name = 'five_prime_coding_exon' OR cvterm.name = 'three_prime_coding_exon' OR cvterm.name = 'three_prime_noncoding_exon' OR cvterm.name = 'five_prime_noncoding_exon' OR cvterm.name = 'pre_edited_region' OR cvterm.name = 'editing_block' OR cvterm.name = 'editing_domain' OR cvterm.name = 'unedited_region' OR cvterm.name = 'mRNA_region' OR cvterm.name = 'tmRNA_region' OR cvterm.name = 'guide_RNA_region' OR cvterm.name = 'tRNA_region' OR cvterm.name = 'riboswitch' OR cvterm.name = 'UTR' OR cvterm.name = 'CDS' OR cvterm.name = 'codon' OR cvterm.name = 'five_prime_open_reading_frame' OR cvterm.name = 'UTR_region' OR cvterm.name = 'CDS_region' OR cvterm.name = 'translational_frameshift' OR cvterm.name = 'recoding_stimulatory_region' OR cvterm.name = 'five_prime_UTR' OR cvterm.name = 'three_prime_UTR' OR cvterm.name = 'internal_UTR' OR cvterm.name = 'untranslated_region_polycistronic_mRNA' OR cvterm.name = 'edited_CDS' OR cvterm.name = 'CDS_fragment' OR cvterm.name = 'CDS_independently_known' OR cvterm.name = 'CDS_predicted' OR cvterm.name = 'orphan_CDS' OR cvterm.name = 'CDS_supported_by_sequence_similarity_data' OR cvterm.name = 'CDS_supported_by_domain_match_data' OR cvterm.name = 'CDS_supported_by_EST_or_cDNA_data' OR cvterm.name = 'recoded_codon' OR cvterm.name = 'start_codon' OR cvterm.name = 'stop_codon' OR cvterm.name = 'stop_codon_read_through' OR cvterm.name = 'stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'non_canonical_start_codon' OR cvterm.name = 'four_bp_start_codon' OR cvterm.name = 'CTG_start_codon' OR cvterm.name = 'ribosome_entry_site' OR cvterm.name = 'polyA_site' OR cvterm.name = 'upstream_AUG_codon' OR cvterm.name = 'AU_rich_element' OR cvterm.name = 'Bruno_response_element' OR cvterm.name = 'iron_responsive_element' OR cvterm.name = 'internal_ribosome_entry_site' OR cvterm.name = 'Shine_Dalgarno_sequence' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'coding_start' OR cvterm.name = 'coding_end' OR cvterm.name = 'plus_1_translational_frameshift' OR cvterm.name = 'plus_2_translational_frameshift' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'SECIS_element' OR cvterm.name = 'three_prime_recoding_site' OR cvterm.name = 'five_prime_recoding_site' OR cvterm.name = 'stop_codon_signal' OR cvterm.name = 'three_prime_stem_loop_structure' OR cvterm.name = 'flanking_three_prime_quadruplet_recoding_signal' OR cvterm.name = 'three_prime_repeat_recoding_signal' OR cvterm.name = 'distant_three_prime_recoding_signal' OR cvterm.name = 'UAG_stop_codon_signal' OR cvterm.name = 'UAA_stop_codon_signal' OR cvterm.name = 'UGA_stop_codon_signal' OR cvterm.name = 'tmRNA_coding_piece' OR cvterm.name = 'tmRNA_acceptor_piece' OR cvterm.name = 'anchor_region' OR cvterm.name = 'template_region' OR cvterm.name = 'anticodon_loop' OR cvterm.name = 'anticodon' OR cvterm.name = 'CCA_tail' OR cvterm.name = 'DHU_loop' OR cvterm.name = 'T_loop' OR cvterm.name = 'splice_site' OR cvterm.name = 'intron' OR cvterm.name = 'clip' OR cvterm.name = 'TSS' OR cvterm.name = 'transcription_end_site' OR cvterm.name = 'spliced_leader_RNA' OR cvterm.name = 'rRNA_primary_transcript_region' OR cvterm.name = 'spliceosomal_intron_region' OR cvterm.name = 'intron_domain' OR cvterm.name = 'miRNA_primary_transcript_region' OR cvterm.name = 'outron' OR cvterm.name = 'cis_splice_site' OR cvterm.name = 'trans_splice_site' OR cvterm.name = 'five_prime_cis_splice_site' OR cvterm.name = 'three_prime_cis_splice_site' OR cvterm.name = 'recursive_splice_site' OR cvterm.name = 'canonical_five_prime_splice_site' OR cvterm.name = 'non_canonical_five_prime_splice_site' OR cvterm.name = 'canonical_three_prime_splice_site' OR cvterm.name = 'non_canonical_three_prime_splice_site' OR cvterm.name = 'trans_splice_acceptor_site' OR cvterm.name = 'trans_splice_donor_site' OR cvterm.name = 'SL1_acceptor_site' OR cvterm.name = 'SL2_acceptor_site' OR cvterm.name = 'five_prime_intron' OR cvterm.name = 'interior_intron' OR cvterm.name = 'three_prime_intron' OR cvterm.name = 'twintron' OR cvterm.name = 'UTR_intron' OR cvterm.name = 'autocatalytically_spliced_intron' OR cvterm.name = 'spliceosomal_intron' OR cvterm.name = 'mobile_intron' OR cvterm.name = 'endonuclease_spliced_intron' OR cvterm.name = 'five_prime_UTR_intron' OR cvterm.name = 'three_prime_UTR_intron' OR cvterm.name = 'group_I_intron' OR cvterm.name = 'group_II_intron' OR cvterm.name = 'group_III_intron' OR cvterm.name = 'group_IIA_intron' OR cvterm.name = 'group_IIB_intron' OR cvterm.name = 'U2_intron' OR cvterm.name = 'U12_intron' OR cvterm.name = 'archaeal_intron' OR cvterm.name = 'tRNA_intron' OR cvterm.name = 'five_prime_clip' OR cvterm.name = 'three_prime_clip' OR cvterm.name = 'major_TSS' OR cvterm.name = 'minor_TSS' OR cvterm.name = 'transcribed_spacer_region' OR cvterm.name = 'internal_transcribed_spacer_region' OR cvterm.name = 'external_transcribed_spacer_region' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'branch_site' OR cvterm.name = 'polypyrimidine_tract' OR cvterm.name = 'internal_guide_sequence' OR cvterm.name = 'mirtron' OR cvterm.name = 'pre_miRNA' OR cvterm.name = 'miRNA_stem' OR cvterm.name = 'miRNA_loop' OR cvterm.name = 'miRNA_antiguide' OR cvterm.name = 'noncoding_region_of_exon' OR cvterm.name = 'coding_region_of_exon' OR cvterm.name = 'three_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_coding_region' OR cvterm.name = 'three_prime_coding exon_coding_region' OR cvterm.name = 'transcript_region';
> 
> --- ************************************************
> --- *** relation: mature_transcript_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a mature transcript.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW mature_transcript_region AS
>   SELECT
>     feature_id AS mature_transcript_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_region' OR cvterm.name = 'tmRNA_region' OR cvterm.name = 'guide_RNA_region' OR cvterm.name = 'tRNA_region' OR cvterm.name = 'riboswitch' OR cvterm.name = 'UTR' OR cvterm.name = 'CDS' OR cvterm.name = 'codon' OR cvterm.name = 'five_prime_open_reading_frame' OR cvterm.name = 'UTR_region' OR cvterm.name = 'CDS_region' OR cvterm.name = 'translational_frameshift' OR cvterm.name = 'recoding_stimulatory_region' OR cvterm.name = 'five_prime_UTR' OR cvterm.name = 'three_prime_UTR' OR cvterm.name = 'internal_UTR' OR cvterm.name = 'untranslated_region_polycistronic_mRNA' OR cvterm.name = 'edited_CDS' OR cvterm.name = 'CDS_fragment' OR cvterm.name = 'CDS_independently_known' OR cvterm.name = 'CDS_predicted' OR cvterm.name = 'orphan_CDS' OR cvterm.name = 'CDS_supported_by_sequence_similarity_data' OR cvterm.name = 'CDS_supported_by_domain_match_data' OR cvterm.name = 'CDS_supported_by_EST_or_cDNA_data' OR cvterm.name = 'recoded_codon' OR cvterm.name = 'start_codon' OR cvterm.name = 'stop_codon' OR cvterm.name = 'stop_codon_read_through' OR cvterm.name = 'stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'non_canonical_start_codon' OR cvterm.name = 'four_bp_start_codon' OR cvterm.name = 'CTG_start_codon' OR cvterm.name = 'ribosome_entry_site' OR cvterm.name = 'polyA_site' OR cvterm.name = 'upstream_AUG_codon' OR cvterm.name = 'AU_rich_element' OR cvterm.name = 'Bruno_response_element' OR cvterm.name = 'iron_responsive_element' OR cvterm.name = 'internal_ribosome_entry_site' OR cvterm.name = 'Shine_Dalgarno_sequence' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'coding_start' OR cvterm.name = 'coding_end' OR cvterm.name = 'plus_1_translational_frameshift' OR cvterm.name = 'plus_2_translational_frameshift' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'SECIS_element' OR cvterm.name = 'three_prime_recoding_site' OR cvterm.name = 'five_prime_recoding_site' OR cvterm.name = 'stop_codon_signal' OR cvterm.name = 'three_prime_stem_loop_structure' OR cvterm.name = 'flanking_three_prime_quadruplet_recoding_signal' OR cvterm.name = 'three_prime_repeat_recoding_signal' OR cvterm.name = 'distant_three_prime_recoding_signal' OR cvterm.name = 'UAG_stop_codon_signal' OR cvterm.name = 'UAA_stop_codon_signal' OR cvterm.name = 'UGA_stop_codon_signal' OR cvterm.name = 'tmRNA_coding_piece' OR cvterm.name = 'tmRNA_acceptor_piece' OR cvterm.name = 'anchor_region' OR cvterm.name = 'template_region' OR cvterm.name = 'anticodon_loop' OR cvterm.name = 'anticodon' OR cvterm.name = 'CCA_tail' OR cvterm.name = 'DHU_loop' OR cvterm.name = 'T_loop' OR cvterm.name = 'mature_transcript_region';
> 
> --- ************************************************
> --- *** relation: primary_transcript_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A part of a primary transcript.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW primary_transcript_region AS
>   SELECT
>     feature_id AS primary_transcript_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'splice_site' OR cvterm.name = 'intron' OR cvterm.name = 'clip' OR cvterm.name = 'TSS' OR cvterm.name = 'transcription_end_site' OR cvterm.name = 'spliced_leader_RNA' OR cvterm.name = 'rRNA_primary_transcript_region' OR cvterm.name = 'spliceosomal_intron_region' OR cvterm.name = 'intron_domain' OR cvterm.name = 'miRNA_primary_transcript_region' OR cvterm.name = 'outron' OR cvterm.name = 'cis_splice_site' OR cvterm.name = 'trans_splice_site' OR cvterm.name = 'five_prime_cis_splice_site' OR cvterm.name = 'three_prime_cis_splice_site' OR cvterm.name = 'recursive_splice_site' OR cvterm.name = 'canonical_five_prime_splice_site' OR cvterm.name = 'non_canonical_five_prime_splice_site' OR cvterm.name = 'canonical_three_prime_splice_site' OR cvterm.name = 'non_canonical_three_prime_splice_site' OR cvterm.name = 'trans_splice_acceptor_site' OR cvterm.name = 'trans_splice_donor_site' OR cvterm.name = 'SL1_acceptor_site' OR cvterm.name = 'SL2_acceptor_site' OR cvterm.name = 'five_prime_intron' OR cvterm.name = 'interior_intron' OR cvterm.name = 'three_prime_intron' OR cvterm.name = 'twintron' OR cvterm.name = 'UTR_intron' OR cvterm.name = 'autocatalytically_spliced_intron' OR cvterm.name = 'spliceosomal_intron' OR cvterm.name = 'mobile_intron' OR cvterm.name = 'endonuclease_spliced_intron' OR cvterm.name = 'five_prime_UTR_intron' OR cvterm.name = 'three_prime_UTR_intron' OR cvterm.name = 'group_I_intron' OR cvterm.name = 'group_II_intron' OR cvterm.name = 'group_III_intron' OR cvterm.name = 'group_IIA_intron' OR cvterm.name = 'group_IIB_intron' OR cvterm.name = 'U2_intron' OR cvterm.name = 'U12_intron' OR cvterm.name = 'archaeal_intron' OR cvterm.name = 'tRNA_intron' OR cvterm.name = 'five_prime_clip' OR cvterm.name = 'three_prime_clip' OR cvterm.name = 'major_TSS' OR cvterm.name = 'minor_TSS' OR cvterm.name = 'transcribed_spacer_region' OR cvterm.name = 'internal_transcribed_spacer_region' OR cvterm.name = 'external_transcribed_spacer_region' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'branch_site' OR cvterm.name = 'polypyrimidine_tract' OR cvterm.name = 'internal_guide_sequence' OR cvterm.name = 'mirtron' OR cvterm.name = 'pre_miRNA' OR cvterm.name = 'miRNA_stem' OR cvterm.name = 'miRNA_loop' OR cvterm.name = 'miRNA_antiguide' OR cvterm.name = 'primary_transcript_region';
> 
> --- ************************************************
> --- *** relation: mrna_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of an mRNA.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna_region AS
>   SELECT
>     feature_id AS mrna_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'riboswitch' OR cvterm.name = 'UTR' OR cvterm.name = 'CDS' OR cvterm.name = 'codon' OR cvterm.name = 'five_prime_open_reading_frame' OR cvterm.name = 'UTR_region' OR cvterm.name = 'CDS_region' OR cvterm.name = 'translational_frameshift' OR cvterm.name = 'recoding_stimulatory_region' OR cvterm.name = 'five_prime_UTR' OR cvterm.name = 'three_prime_UTR' OR cvterm.name = 'internal_UTR' OR cvterm.name = 'untranslated_region_polycistronic_mRNA' OR cvterm.name = 'edited_CDS' OR cvterm.name = 'CDS_fragment' OR cvterm.name = 'CDS_independently_known' OR cvterm.name = 'CDS_predicted' OR cvterm.name = 'orphan_CDS' OR cvterm.name = 'CDS_supported_by_sequence_similarity_data' OR cvterm.name = 'CDS_supported_by_domain_match_data' OR cvterm.name = 'CDS_supported_by_EST_or_cDNA_data' OR cvterm.name = 'recoded_codon' OR cvterm.name = 'start_codon' OR cvterm.name = 'stop_codon' OR cvterm.name = 'stop_codon_read_through' OR cvterm.name = 'stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'non_canonical_start_codon' OR cvterm.name = 'four_bp_start_codon' OR cvterm.name = 'CTG_start_codon' OR cvterm.name = 'ribosome_entry_site' OR cvterm.name = 'polyA_site' OR cvterm.name = 'upstream_AUG_codon' OR cvterm.name = 'AU_rich_element' OR cvterm.name = 'Bruno_response_element' OR cvterm.name = 'iron_responsive_element' OR cvterm.name = 'internal_ribosome_entry_site' OR cvterm.name = 'Shine_Dalgarno_sequence' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'coding_start' OR cvterm.name = 'coding_end' OR cvterm.name = 'plus_1_translational_frameshift' OR cvterm.name = 'plus_2_translational_frameshift' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'SECIS_element' OR cvterm.name = 'three_prime_recoding_site' OR cvterm.name = 'five_prime_recoding_site' OR cvterm.name = 'stop_codon_signal' OR cvterm.name = 'three_prime_stem_loop_structure' OR cvterm.name = 'flanking_three_prime_quadruplet_recoding_signal' OR cvterm.name = 'three_prime_repeat_recoding_signal' OR cvterm.name = 'distant_three_prime_recoding_signal' OR cvterm.name = 'UAG_stop_codon_signal' OR cvterm.name = 'UAA_stop_codon_signal' OR cvterm.name = 'UGA_stop_codon_signal' OR cvterm.name = 'mRNA_region';
> 
> --- ************************************************
> --- *** relation: utr_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of UTR.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW utr_region AS
>   SELECT
>     feature_id AS utr_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ribosome_entry_site' OR cvterm.name = 'polyA_site' OR cvterm.name = 'upstream_AUG_codon' OR cvterm.name = 'AU_rich_element' OR cvterm.name = 'Bruno_response_element' OR cvterm.name = 'iron_responsive_element' OR cvterm.name = 'internal_ribosome_entry_site' OR cvterm.name = 'Shine_Dalgarno_sequence' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'UTR_region';
> 
> --- ************************************************
> --- *** relation: rrna_primary_transcript_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of an rRNA primary transcript.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_primary_transcript_region AS
>   SELECT
>     feature_id AS rrna_primary_transcript_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcribed_spacer_region' OR cvterm.name = 'internal_transcribed_spacer_region' OR cvterm.name = 'external_transcribed_spacer_region' OR cvterm.name = 'rRNA_primary_transcript_region';
> 
> --- ************************************************
> --- *** relation: polypeptide_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Biological sequence region that can be a ***
> --- *** ssigned to a specific subsequence of a p ***
> --- *** olypeptide.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_region AS
>   SELECT
>     feature_id AS polypeptide_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mature_protein_region' OR cvterm.name = 'immature_peptide_region' OR cvterm.name = 'compositionally_biased_region_of_peptide' OR cvterm.name = 'polypeptide_structural_region' OR cvterm.name = 'polypeptide_variation_site' OR cvterm.name = 'cleaved_peptide_region' OR cvterm.name = 'hydrophobic_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_region' OR cvterm.name = 'active_peptide' OR cvterm.name = 'polypeptide_domain' OR cvterm.name = 'membrane_structure' OR cvterm.name = 'extramembrane_polypeptide_region' OR cvterm.name = 'intramembrane_polypeptide_region' OR cvterm.name = 'polypeptide_secondary_structure' OR cvterm.name = 'polypeptide_structural_motif' OR cvterm.name = 'intrinsically_unstructured_polypeptide_region' OR cvterm.name = 'cytoplasmic_polypeptide_region' OR cvterm.name = 'non_cytoplasmic_polypeptide_region' OR cvterm.name = 'membrane_peptide_loop' OR cvterm.name = 'transmembrane_polypeptide_region' OR cvterm.name = 'asx_motif' OR cvterm.name = 'beta_bulge' OR cvterm.name = 'beta_bulge_loop' OR cvterm.name = 'beta_strand' OR cvterm.name = 'peptide_helix' OR cvterm.name = 'polypeptide_nest_motif' OR cvterm.name = 'schellmann_loop' OR cvterm.name = 'serine_threonine_motif' OR cvterm.name = 'serine_threonine_staple_motif' OR cvterm.name = 'polypeptide_turn_motif' OR cvterm.name = 'catmat_left_handed_three' OR cvterm.name = 'catmat_left_handed_four' OR cvterm.name = 'catmat_right_handed_three' OR cvterm.name = 'catmat_right_handed_four' OR cvterm.name = 'alpha_beta_motif' OR cvterm.name = 'peptide_coil' OR cvterm.name = 'beta_bulge_loop_five' OR cvterm.name = 'beta_bulge_loop_six' OR cvterm.name = 'antiparallel_beta_strand' OR cvterm.name = 'parallel_beta_strand' OR cvterm.name = 'left_handed_peptide_helix' OR cvterm.name = 'right_handed_peptide_helix' OR cvterm.name = 'alpha_helix' OR cvterm.name = 'pi_helix' OR cvterm.name = 'three_ten_helix' OR cvterm.name = 'polypeptide_nest_left_right_motif' OR cvterm.name = 'polypeptide_nest_right_left_motif' OR cvterm.name = 'schellmann_loop_seven' OR cvterm.name = 'schellmann_loop_six' OR cvterm.name = 'asx_turn' OR cvterm.name = 'beta_turn' OR cvterm.name = 'gamma_turn' OR cvterm.name = 'serine_threonine_turn' OR cvterm.name = 'asx_turn_left_handed_type_one' OR cvterm.name = 'asx_turn_left_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_two' OR cvterm.name = 'beta_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_right_handed_type_two' OR cvterm.name = 'beta_turn_type_six' OR cvterm.name = 'beta_turn_type_eight' OR cvterm.name = 'beta_turn_type_six_a' OR cvterm.name = 'beta_turn_type_six_b' OR cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'gamma_turn_classic' OR cvterm.name = 'gamma_turn_inverse' OR cvterm.name = 'st_turn_left_handed_type_one' OR cvterm.name = 'st_turn_left_handed_type_two' OR cvterm.name = 'st_turn_right_handed_type_one' OR cvterm.name = 'st_turn_right_handed_type_two' OR cvterm.name = 'coiled_coil' OR cvterm.name = 'helix_turn_helix' OR cvterm.name = 'natural_variant_site' OR cvterm.name = 'mutated_variant_site' OR cvterm.name = 'alternate_sequence_site' OR cvterm.name = 'signal_peptide' OR cvterm.name = 'cleaved_initiator_methionine' OR cvterm.name = 'transit_peptide' OR cvterm.name = 'intein' OR cvterm.name = 'propeptide_cleavage_site' OR cvterm.name = 'propeptide' OR cvterm.name = 'cleaved_for_gpi_anchor_region' OR cvterm.name = 'lipoprotein_signal_peptide' OR cvterm.name = 'n_terminal_region' OR cvterm.name = 'c_terminal_region' OR cvterm.name = 'central_hydrophobic_region_of_signal_peptide' OR cvterm.name = 'polypeptide_domain' OR cvterm.name = 'polypeptide_motif' OR cvterm.name = 'polypeptide_repeat' OR cvterm.name = 'biochemical_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_motif' OR cvterm.name = 'post_translationally_modified_region' OR cvterm.name = 'conformational_switch' OR cvterm.name = 'molecular_contact_region' OR cvterm.name = 'polypeptide_binding_motif' OR cvterm.name = 'polypeptide_catalytic_motif' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'polypeptide_region';
> 
> --- ************************************************
> --- *** relation: repeat_component ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a repeated sequence.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW repeat_component AS
>   SELECT
>     feature_id AS repeat_component_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_LTR_retrotransposon_polymeric_tract' OR cvterm.name = 'LTR_component' OR cvterm.name = 'repeat_fragment' OR cvterm.name = 'U5_LTR_region' OR cvterm.name = 'R_LTR_region' OR cvterm.name = 'U3_LTR_region' OR cvterm.name = 'three_prime_LTR_component' OR cvterm.name = 'five_prime_LTR_component' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'R_three_prime_LTR_region' OR cvterm.name = 'U3_three_prime_LTR_region' OR cvterm.name = 'U5_three_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'repeat_component';
> 
> --- ************************************************
> --- *** relation: spliceosomal_intron_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region within an intron.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW spliceosomal_intron_region AS
>   SELECT
>     feature_id AS spliceosomal_intron_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'branch_site' OR cvterm.name = 'polypyrimidine_tract' OR cvterm.name = 'spliceosomal_intron_region';
> 
> --- ************************************************
> --- *** relation: gene_component_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_component_region AS
>   SELECT
>     feature_id AS gene_component_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_transcribed_region' OR cvterm.name = 'gene_fragment' OR cvterm.name = 'TSS_region' OR cvterm.name = 'gene_segment' OR cvterm.name = 'gene_component_region';
> 
> --- ************************************************
> --- *** relation: tmrna_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a tmRNA.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW tmrna_region AS
>   SELECT
>     feature_id AS tmrna_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tmRNA_coding_piece' OR cvterm.name = 'tmRNA_acceptor_piece' OR cvterm.name = 'tmRNA_region';
> 
> --- ************************************************
> --- *** relation: ltr_component ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW ltr_component AS
>   SELECT
>     feature_id AS ltr_component_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U5_LTR_region' OR cvterm.name = 'R_LTR_region' OR cvterm.name = 'U3_LTR_region' OR cvterm.name = 'three_prime_LTR_component' OR cvterm.name = 'five_prime_LTR_component' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'R_three_prime_LTR_region' OR cvterm.name = 'U3_three_prime_LTR_region' OR cvterm.name = 'U5_three_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'LTR_component';
> 
> --- ************************************************
> --- *** relation: three_prime_ltr_component ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_ltr_component AS
>   SELECT
>     feature_id AS three_prime_ltr_component_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'R_three_prime_LTR_region' OR cvterm.name = 'U3_three_prime_LTR_region' OR cvterm.name = 'U5_three_prime_LTR_region' OR cvterm.name = 'three_prime_LTR_component';
> 
> --- ************************************************
> --- *** relation: five_prime_ltr_component ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_ltr_component AS
>   SELECT
>     feature_id AS five_prime_ltr_component_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'five_prime_LTR_component';
> 
> --- ************************************************
> --- *** relation: cds_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a CDS.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW cds_region AS
>   SELECT
>     feature_id AS cds_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'coding_start' OR cvterm.name = 'coding_end' OR cvterm.name = 'CDS_region';
> 
> --- ************************************************
> --- *** relation: exon_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of an exon.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW exon_region AS
>   SELECT
>     feature_id AS exon_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'noncoding_region_of_exon' OR cvterm.name = 'coding_region_of_exon' OR cvterm.name = 'three_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_coding_region' OR cvterm.name = 'three_prime_coding exon_coding_region' OR cvterm.name = 'exon_region';
> 
> --- ************************************************
> --- *** relation: homologous_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region that is homologous to another r ***
> --- *** egion.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW homologous_region AS
>   SELECT
>     feature_id AS homologous_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'paralogous_region' OR cvterm.name = 'orthologous_region' OR cvterm.name = 'homologous_region';
> 
> --- ************************************************
> --- *** relation: paralogous_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A homologous_region that is paralogous t ***
> --- *** o another region.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW paralogous_region AS
>   SELECT
>     feature_id AS paralogous_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'paralogous_region';
> 
> --- ************************************************
> --- *** relation: orthologous_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A homologous_region that is orthologous  ***
> --- *** to another region.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW orthologous_region AS
>   SELECT
>     feature_id AS orthologous_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'orthologous_region';
> 
> --- ************************************************
> --- *** relation: conserved ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW conserved AS
>   SELECT
>     feature_id AS conserved_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'homologous' OR cvterm.name = 'syntenic' OR cvterm.name = 'orthologous' OR cvterm.name = 'paralogous' OR cvterm.name = 'conserved';
> 
> --- ************************************************
> --- *** relation: homologous ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Similarity due to common ancestry.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW homologous AS
>   SELECT
>     feature_id AS homologous_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'orthologous' OR cvterm.name = 'paralogous' OR cvterm.name = 'homologous';
> 
> --- ************************************************
> --- *** relation: orthologous ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a kind of homolo ***
> --- *** gy where divergence occured after a spec ***
> --- *** iation event.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW orthologous AS
>   SELECT
>     feature_id AS orthologous_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'orthologous';
> 
> --- ************************************************
> --- *** relation: paralogous ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a kind of homolo ***
> --- *** gy where divergence occurred after a dup ***
> --- *** lication event.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW paralogous AS
>   SELECT
>     feature_id AS paralogous_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'paralogous';
> 
> --- ************************************************
> --- *** relation: syntenic ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Attribute describing sequence regions oc ***
> --- *** curring in same order on chromosome of d ***
> --- *** ifferent species.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW syntenic AS
>   SELECT
>     feature_id AS syntenic_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'syntenic';
> 
> --- ************************************************
> --- *** relation: capped_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript that is capped.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW capped_primary_transcript AS
>   SELECT
>     feature_id AS capped_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'capped_primary_transcript';
> 
> --- ************************************************
> --- *** relation: capped_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA that is capped.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW capped_mrna AS
>   SELECT
>     feature_id AS capped_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'capped_mRNA';
> 
> --- ************************************************
> --- *** relation: mrna_attribute ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an mRNA feature. ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna_attribute AS
>   SELECT
>     feature_id AS mrna_attribute_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polyadenylated' OR cvterm.name = 'exemplar' OR cvterm.name = 'frameshift' OR cvterm.name = 'recoded' OR cvterm.name = 'minus_1_frameshift' OR cvterm.name = 'minus_2_frameshift' OR cvterm.name = 'plus_1_frameshift' OR cvterm.name = 'plus_2_framshift' OR cvterm.name = 'codon_redefined' OR cvterm.name = 'recoded_by_translational_bypass' OR cvterm.name = 'translationally_frameshifted' OR cvterm.name = 'minus_1_translationally_frameshifted' OR cvterm.name = 'plus_1_translationally_frameshifted' OR cvterm.name = 'mRNA_attribute';
> 
> --- ************************************************
> --- *** relation: exemplar ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence is re ***
> --- *** presentative of a class of similar seque ***
> --- *** nces.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW exemplar AS
>   SELECT
>     feature_id AS exemplar_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'exemplar';
> 
> --- ************************************************
> --- *** relation: frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence that  ***
> --- *** contains a mutation involving the deleti ***
> --- *** on or insertion of one or more bases, wh ***
> --- *** ere this number is not divisible by 3.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW frameshift AS
>   SELECT
>     feature_id AS frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minus_1_frameshift' OR cvterm.name = 'minus_2_frameshift' OR cvterm.name = 'plus_1_frameshift' OR cvterm.name = 'plus_2_framshift' OR cvterm.name = 'frameshift';
> 
> --- ************************************************
> --- *** relation: minus_1_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A frameshift caused by deleting one base ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW minus_1_frameshift AS
>   SELECT
>     feature_id AS minus_1_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minus_1_frameshift';
> 
> --- ************************************************
> --- *** relation: minus_2_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A frameshift caused by deleting two base ***
> --- *** s.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW minus_2_frameshift AS
>   SELECT
>     feature_id AS minus_2_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minus_2_frameshift';
> 
> --- ************************************************
> --- *** relation: plus_1_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A frameshift caused by inserting one bas ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW plus_1_frameshift AS
>   SELECT
>     feature_id AS plus_1_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plus_1_frameshift';
> 
> --- ************************************************
> --- *** relation: plus_2_framshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A frameshift caused by inserting two bas ***
> --- *** es.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW plus_2_framshift AS
>   SELECT
>     feature_id AS plus_2_framshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plus_2_framshift';
> 
> --- ************************************************
> --- *** relation: trans_spliced ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing transcript seque ***
> --- *** nce that is created by splicing exons fr ***
> --- *** om diferent genes.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW trans_spliced AS
>   SELECT
>     feature_id AS trans_spliced_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'trans_spliced';
> 
> --- ************************************************
> --- *** relation: polyadenylated_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA that is polyadenylated.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW polyadenylated_mrna AS
>   SELECT
>     feature_id AS polyadenylated_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polyadenylated_mRNA';
> 
> --- ************************************************
> --- *** relation: trans_spliced_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA that is trans-spliced.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW trans_spliced_mrna AS
>   SELECT
>     feature_id AS trans_spliced_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'trans_spliced_mRNA';
> 
> --- ************************************************
> --- *** relation: edited_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that is edited.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW edited_transcript AS
>   SELECT
>     feature_id AS edited_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'edited_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'edited_transcript';
> 
> --- ************************************************
> --- *** relation: edited_transcript_by_a_to_i_substitution ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that has been edited by A t ***
> --- *** o I substitution.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW edited_transcript_by_a_to_i_substitution AS
>   SELECT
>     feature_id AS edited_transcript_by_a_to_i_substitution_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'edited_transcript_by_A_to_I_substitution';
> 
> --- ************************************************
> --- *** relation: bound_by_protein ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence that  ***
> --- *** is bound by a protein.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW bound_by_protein AS
>   SELECT
>     feature_id AS bound_by_protein_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'bound_by_protein';
> 
> --- ************************************************
> --- *** relation: bound_by_nucleic_acid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence that  ***
> --- *** is bound by a nucleic acid.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW bound_by_nucleic_acid AS
>   SELECT
>     feature_id AS bound_by_nucleic_acid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'bound_by_nucleic_acid';
> 
> --- ************************************************
> --- *** relation: alternatively_spliced ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a situation wher ***
> --- *** e a gene may encode for more than 1 tran ***
> --- *** script.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW alternatively_spliced AS
>   SELECT
>     feature_id AS alternatively_spliced_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alternatively_spliced';
> 
> --- ************************************************
> --- *** relation: monocistronic ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence that  ***
> --- *** contains the code for one gene product.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW monocistronic AS
>   SELECT
>     feature_id AS monocistronic_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'monocistronic';
> 
> --- ************************************************
> --- *** relation: dicistronic ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence that  ***
> --- *** contains the code for two gene products. ***
> --- ************************************************
> ---
> 
> CREATE VIEW dicistronic AS
>   SELECT
>     feature_id AS dicistronic_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dicistronic';
> 
> --- ************************************************
> --- *** relation: polycistronic ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence that  ***
> --- *** contains the code for more than one gene ***
> --- ***  product.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW polycistronic AS
>   SELECT
>     feature_id AS polycistronic_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dicistronic' OR cvterm.name = 'polycistronic';
> 
> --- ************************************************
> --- *** relation: recoded ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an mRNA sequence ***
> --- ***  that has been reprogrammed at translati ***
> --- *** on, causing localized alterations.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW recoded AS
>   SELECT
>     feature_id AS recoded_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'codon_redefined' OR cvterm.name = 'recoded_by_translational_bypass' OR cvterm.name = 'translationally_frameshifted' OR cvterm.name = 'minus_1_translationally_frameshifted' OR cvterm.name = 'plus_1_translationally_frameshifted' OR cvterm.name = 'recoded';
> 
> --- ************************************************
> --- *** relation: codon_redefined ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing the alteration o ***
> --- *** f codon meaning.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW codon_redefined AS
>   SELECT
>     feature_id AS codon_redefined_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'codon_redefined';
> 
> --- ************************************************
> --- *** relation: stop_codon_read_through ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A stop codon redefined to be a new amino ***
> --- ***  acid.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW stop_codon_read_through AS
>   SELECT
>     feature_id AS stop_codon_read_through_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'stop_codon_read_through';
> 
> --- ************************************************
> --- *** relation: stop_codon_redefined_as_pyrrolysine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A stop codon redefined to be the new ami ***
> --- *** no acid, pyrrolysine.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW stop_codon_redefined_as_pyrrolysine AS
>   SELECT
>     feature_id AS stop_codon_redefined_as_pyrrolysine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stop_codon_redefined_as_pyrrolysine';
> 
> --- ************************************************
> --- *** relation: stop_codon_redefined_as_selenocysteine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A stop codon redefined to be the new ami ***
> --- *** no acid, selenocysteine.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW stop_codon_redefined_as_selenocysteine AS
>   SELECT
>     feature_id AS stop_codon_redefined_as_selenocysteine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stop_codon_redefined_as_selenocysteine';
> 
> --- ************************************************
> --- *** relation: recoded_by_translational_bypass ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Recoded mRNA where a block of nucleotide ***
> --- *** s is not translated.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW recoded_by_translational_bypass AS
>   SELECT
>     feature_id AS recoded_by_translational_bypass_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recoded_by_translational_bypass';
> 
> --- ************************************************
> --- *** relation: translationally_frameshifted ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Recoding by frameshifting a particular s ***
> --- *** ite.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW translationally_frameshifted AS
>   SELECT
>     feature_id AS translationally_frameshifted_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minus_1_translationally_frameshifted' OR cvterm.name = 'plus_1_translationally_frameshifted' OR cvterm.name = 'translationally_frameshifted';
> 
> --- ************************************************
> --- *** relation: maternally_imprinted_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is maternally_imprinted.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW maternally_imprinted_gene AS
>   SELECT
>     feature_id AS maternally_imprinted_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'maternally_imprinted_gene';
> 
> --- ************************************************
> --- *** relation: paternally_imprinted_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is paternally imprinted.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW paternally_imprinted_gene AS
>   SELECT
>     feature_id AS paternally_imprinted_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'paternally_imprinted_gene';
> 
> --- ************************************************
> --- *** relation: post_translationally_regulated_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is post translationally regu ***
> --- *** lated.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW post_translationally_regulated_gene AS
>   SELECT
>     feature_id AS post_translationally_regulated_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'post_translationally_regulated_gene';
> 
> --- ************************************************
> --- *** relation: negatively_autoregulated_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is negatively autoreguated.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW negatively_autoregulated_gene AS
>   SELECT
>     feature_id AS negatively_autoregulated_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'negatively_autoregulated_gene';
> 
> --- ************************************************
> --- *** relation: positively_autoregulated_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is positively autoregulated. ***
> --- ************************************************
> ---
> 
> CREATE VIEW positively_autoregulated_gene AS
>   SELECT
>     feature_id AS positively_autoregulated_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'positively_autoregulated_gene';
> 
> --- ************************************************
> --- *** relation: silenced ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an epigenetic pr ***
> --- *** ocess where a gene is inactivated at tra ***
> --- *** nscriptional or translational level.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW silenced AS
>   SELECT
>     feature_id AS silenced_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'silenced_by_DNA_modification' OR cvterm.name = 'silenced_by_RNA_interference' OR cvterm.name = 'silenced_by_histone_modification' OR cvterm.name = 'silenced_by_DNA_methylation' OR cvterm.name = 'silenced_by_histone_methylation' OR cvterm.name = 'silenced_by_histone_deacetylation' OR cvterm.name = 'silenced';
> 
> --- ************************************************
> --- *** relation: silenced_by_dna_modification ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an epigenetic pr ***
> --- *** ocess where a gene is inactivated by DNA ***
> --- ***  modifications, resulting in repression  ***
> --- *** of transcription.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW silenced_by_dna_modification AS
>   SELECT
>     feature_id AS silenced_by_dna_modification_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'silenced_by_DNA_methylation' OR cvterm.name = 'silenced_by_DNA_modification';
> 
> --- ************************************************
> --- *** relation: silenced_by_dna_methylation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an epigenetic pr ***
> --- *** ocess where a gene is inactivated by DNA ***
> --- ***  methylation, resulting in repression of ***
> --- ***  transcription.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW silenced_by_dna_methylation AS
>   SELECT
>     feature_id AS silenced_by_dna_methylation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'silenced_by_DNA_methylation';
> 
> --- ************************************************
> --- *** relation: translationally_regulated_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is translationally regulated ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW translationally_regulated_gene AS
>   SELECT
>     feature_id AS translationally_regulated_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'translationally_regulated_gene';
> 
> --- ************************************************
> --- *** relation: allelically_excluded_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is allelically_excluded.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW allelically_excluded_gene AS
>   SELECT
>     feature_id AS allelically_excluded_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'allelically_excluded_gene';
> 
> --- ************************************************
> --- *** relation: epigenetically_modified_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is epigenetically modified.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW epigenetically_modified_gene AS
>   SELECT
>     feature_id AS epigenetically_modified_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_rearranged_at_DNA_level' OR cvterm.name = 'maternally_imprinted_gene' OR cvterm.name = 'paternally_imprinted_gene' OR cvterm.name = 'allelically_excluded_gene' OR cvterm.name = 'epigenetically_modified_gene';
> 
> --- ************************************************
> --- *** relation: transgene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is transgenic.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW transgene AS
>   SELECT
>     feature_id AS transgene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'floxed_gene' OR cvterm.name = 'transgene';
> 
> --- ************************************************
> --- *** relation: endogenous_retroviral_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW endogenous_retroviral_sequence AS
>   SELECT
>     feature_id AS endogenous_retroviral_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'endogenous_retroviral_sequence';
> 
> --- ************************************************
> --- *** relation: rearranged_at_dna_level ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe the sequence of ***
> --- ***  a feature, where the DNA is rearranged. ***
> --- ************************************************
> ---
> 
> CREATE VIEW rearranged_at_dna_level AS
>   SELECT
>     feature_id AS rearranged_at_dna_level_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rearranged_at_DNA_level';
> 
> --- ************************************************
> --- *** relation: status ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing the status of a  ***
> --- *** feature, based on the available evidence ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW status AS
>   SELECT
>     feature_id AS status_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'fragmentary' OR cvterm.name = 'predicted' OR cvterm.name = 'validated' OR cvterm.name = 'invalidated' OR cvterm.name = 'independently_known' OR cvterm.name = 'consensus' OR cvterm.name = 'low_complexity' OR cvterm.name = 'supported_by_sequence_similarity' OR cvterm.name = 'orphan' OR cvterm.name = 'predicted_by_ab_initio_computation' OR cvterm.name = 'supported_by_domain_match' OR cvterm.name = 'supported_by_EST_or_cDNA' OR cvterm.name = 'experimentally_determined' OR cvterm.name = 'invalidated_by_chimeric_cDNA' OR cvterm.name = 'invalidated_by_genomic_contamination' OR cvterm.name = 'invalidated_by_genomic_polyA_primed_cDNA' OR cvterm.name = 'invalidated_by_partial_processing' OR cvterm.name = 'status';
> 
> --- ************************************************
> --- *** relation: independently_known ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Attribute to describe a feature that is  ***
> --- *** independently known - not predicted.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW independently_known AS
>   SELECT
>     feature_id AS independently_known_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'independently_known';
> 
> --- ************************************************
> --- *** relation: supported_by_sequence_similarity ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a feature that  ***
> --- *** has been predicted using sequence simila ***
> --- *** rity techniques.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW supported_by_sequence_similarity AS
>   SELECT
>     feature_id AS supported_by_sequence_similarity_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'supported_by_domain_match' OR cvterm.name = 'supported_by_EST_or_cDNA' OR cvterm.name = 'supported_by_sequence_similarity';
> 
> --- ************************************************
> --- *** relation: supported_by_domain_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a feature that  ***
> --- *** has been predicted using sequence simila ***
> --- *** rity of a known domain.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW supported_by_domain_match AS
>   SELECT
>     feature_id AS supported_by_domain_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'supported_by_domain_match';
> 
> --- ************************************************
> --- *** relation: supported_by_est_or_cdna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a feature that  ***
> --- *** has been predicted using sequence simila ***
> --- *** rity to EST or cDNA data.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW supported_by_est_or_cdna AS
>   SELECT
>     feature_id AS supported_by_est_or_cdna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'supported_by_EST_or_cDNA';
> 
> --- ************************************************
> --- *** relation: orphan ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW orphan AS
>   SELECT
>     feature_id AS orphan_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'orphan';
> 
> --- ************************************************
> --- *** relation: predicted_by_ab_initio_computation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a feature that i ***
> --- *** s predicted by a computer program that d ***
> --- *** id not rely on sequence similarity.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW predicted_by_ab_initio_computation AS
>   SELECT
>     feature_id AS predicted_by_ab_initio_computation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'predicted_by_ab_initio_computation';
> 
> --- ************************************************
> --- *** relation: asx_turn ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of three consecutive residues an ***
> --- *** d one H-bond in which: residue(i) is Asp ***
> --- *** artate or Asparagine (Asx), the side-cha ***
> --- *** in O of residue(i) is H-bonded to the ma ***
> --- *** in-chain NH of residue(i+2).             ***
> --- ************************************************
> ---
> 
> CREATE VIEW asx_turn AS
>   SELECT
>     feature_id AS asx_turn_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asx_turn_left_handed_type_one' OR cvterm.name = 'asx_turn_left_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_one' OR cvterm.name = 'asx_turn';
> 
> --- ************************************************
> --- *** relation: cloned_cdna_insert ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A clone insert made from cDNA.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW cloned_cdna_insert AS
>   SELECT
>     feature_id AS cloned_cdna_insert_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cloned_cDNA_insert';
> 
> --- ************************************************
> --- *** relation: cloned_genomic_insert ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A clone insert made from genomic DNA.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW cloned_genomic_insert AS
>   SELECT
>     feature_id AS cloned_genomic_insert_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'BAC_cloned_genomic_insert' OR cvterm.name = 'cloned_genomic_insert';
> 
> --- ************************************************
> --- *** relation: engineered_insert ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A clone insert that is engineered.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW engineered_insert AS
>   SELECT
>     feature_id AS engineered_insert_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'engineered_insert';
> 
> --- ************************************************
> --- *** relation: edited_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An mRNA that is edited.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW edited_mrna AS
>   SELECT
>     feature_id AS edited_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'edited_mRNA';
> 
> --- ************************************************
> --- *** relation: guide_rna_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of guide RNA.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW guide_rna_region AS
>   SELECT
>     feature_id AS guide_rna_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'anchor_region' OR cvterm.name = 'template_region' OR cvterm.name = 'guide_RNA_region';
> 
> --- ************************************************
> --- *** relation: anchor_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a guide_RNA that base-pairs  ***
> --- *** to a target mRNA.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW anchor_region AS
>   SELECT
>     feature_id AS anchor_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'anchor_region';
> 
> --- ************************************************
> --- *** relation: pre_edited_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW pre_edited_mrna AS
>   SELECT
>     feature_id AS pre_edited_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pre_edited_mRNA';
> 
> --- ************************************************
> --- *** relation: intermediate ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute to describe a feature betwe ***
> --- *** en stages of processing.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW intermediate AS
>   SELECT
>     feature_id AS intermediate_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intermediate';
> 
> --- ************************************************
> --- *** relation: mirna_target_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A miRNA target site is a binding site wh ***
> --- *** ere the molecule is a micro RNA.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirna_target_site AS
>   SELECT
>     feature_id AS mirna_target_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'miRNA_target_site';
> 
> --- ************************************************
> --- *** relation: edited_cds ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A CDS that is edited.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW edited_cds AS
>   SELECT
>     feature_id AS edited_cds_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'edited_CDS';
> 
> --- ************************************************
> --- *** relation: vertebrate_immunoglobulin_t_cell_receptor_rearranged_segment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW vertebrate_immunoglobulin_t_cell_receptor_rearranged_segment AS
>   SELECT
>     feature_id AS vertebrate_immunoglobulin_t_cell_receptor_rearranged_segment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'VD_gene' OR cvterm.name = 'DJ_gene' OR cvterm.name = 'VDJ_gene' OR cvterm.name = 'VJ_gene' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment';
> 
> --- ************************************************
> --- *** relation: vertebrate_ig_t_cell_receptor_rearranged_gene_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW vertebrate_ig_t_cell_receptor_rearranged_gene_cluster AS
>   SELECT
>     feature_id AS vertebrate_ig_t_cell_receptor_rearranged_gene_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DJ_J_cluster' OR cvterm.name = 'VDJ_J_C_cluster' OR cvterm.name = 'VDJ_J_cluster' OR cvterm.name = 'VJ_C_cluster' OR cvterm.name = 'VJ_J_C_cluster' OR cvterm.name = 'VJ_J_cluster' OR cvterm.name = 'D_DJ_C_cluster' OR cvterm.name = 'D_DJ_cluster' OR cvterm.name = 'D_DJ_J_C_cluster' OR cvterm.name = 'D_DJ_J_cluster' OR cvterm.name = 'V_DJ_cluster' OR cvterm.name = 'V_DJ_J_cluster' OR cvterm.name = 'V_VDJ_C_cluster' OR cvterm.name = 'V_VDJ_cluster' OR cvterm.name = 'V_VDJ_J_cluster' OR cvterm.name = 'V_VJ_C_cluster' OR cvterm.name = 'V_VJ_cluster' OR cvterm.name = 'V_VJ_J_cluster' OR cvterm.name = 'V_D_DJ_C_cluster' OR cvterm.name = 'V_D_DJ_cluster' OR cvterm.name = 'V_D_DJ_J_C_cluster' OR cvterm.name = 'V_D_DJ_J_cluster' OR cvterm.name = 'V_D_J_C_cluster' OR cvterm.name = 'V_D_J_cluster' OR cvterm.name = 'DJ_C_cluster' OR cvterm.name = 'DJ_J_C_cluster' OR cvterm.name = 'VDJ_C_cluster' OR cvterm.name = 'V_DJ_C_cluster' OR cvterm.name = 'V_DJ_J_C_cluster' OR cvterm.name = 'V_VDJ_J_C_cluster' OR cvterm.name = 'V_VJ_J_C_cluster' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster';
> 
> --- ************************************************
> --- *** relation: vertebrate_immune_system_gene_recombination_signal_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW vertebrate_immune_system_gene_recombination_signal_feature AS
>   SELECT
>     feature_id AS vertebrate_immune_system_gene_recombination_signal_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'J_gene_recombination_feature' OR cvterm.name = 'D_gene_recombination_feature' OR cvterm.name = 'V_gene_recombination_feature' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_signal_feature';
> 
> --- ************************************************
> --- *** relation: recombinationally_rearranged ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW recombinationally_rearranged AS
>   SELECT
>     feature_id AS recombinationally_rearranged_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recombinationally_rearranged';
> 
> --- ************************************************
> --- *** relation: recombinationally_rearranged_vertebrate_immune_system_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recombinationally rearranged gene of t ***
> --- *** he vertebrate immune system.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW recombinationally_rearranged_vertebrate_immune_system_gene AS
>   SELECT
>     feature_id AS recombinationally_rearranged_vertebrate_immune_system_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recombinationally_rearranged_vertebrate_immune_system_gene';
> 
> --- ************************************************
> --- *** relation: attp_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An integration/excision site of a phage  ***
> --- *** chromosome at which a recombinase acts t ***
> --- *** o insert the phage DNA at a cognate inte ***
> --- *** gration/excision site on a bacterial chr ***
> --- *** omosome.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW attp_site AS
>   SELECT
>     feature_id AS attp_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attP_site';
> 
> --- ************************************************
> --- *** relation: attb_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An integration/excision site of a bacter ***
> --- *** ial chromosome at which a recombinase ac ***
> --- *** ts to insert foreign DNA containing a co ***
> --- *** gnate integration/excision site.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW attb_site AS
>   SELECT
>     feature_id AS attb_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attB_site';
> 
> --- ************************************************
> --- *** relation: attl_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region that results from recombination ***
> --- ***  between attP_site and attB_site, compos ***
> --- *** ed of the 5' portion of attB_site and th ***
> --- *** e 3' portion of attP_site.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW attl_site AS
>   SELECT
>     feature_id AS attl_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attL_site';
> 
> --- ************************************************
> --- *** relation: attr_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region that results from recombination ***
> --- ***  between attP_site and attB_site, compos ***
> --- *** ed of the 5' portion of attP_site and th ***
> --- *** e 3' portion of attB_site.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW attr_site AS
>   SELECT
>     feature_id AS attr_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attR_site';
> 
> --- ************************************************
> --- *** relation: integration_excision_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region specifically recognised by a re ***
> --- *** combinase, which inserts or removes anot ***
> --- *** her region marked by a distinct cognate  ***
> --- *** integration/excision site.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW integration_excision_site AS
>   SELECT
>     feature_id AS integration_excision_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attI_site' OR cvterm.name = 'attP_site' OR cvterm.name = 'attB_site' OR cvterm.name = 'attL_site' OR cvterm.name = 'attR_site' OR cvterm.name = 'attC_site' OR cvterm.name = 'attCtn_site' OR cvterm.name = 'integration_excision_site';
> 
> --- ************************************************
> --- *** relation: resolution_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region specifically recognised by a re ***
> --- *** combinase, which separates a physically  ***
> --- *** contiguous circle of DNA into two physic ***
> --- *** ally separate circles.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW resolution_site AS
>   SELECT
>     feature_id AS resolution_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'loxP_site' OR cvterm.name = 'dif_site' OR cvterm.name = 'resolution_site';
> 
> --- ************************************************
> --- *** relation: inversion_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region specifically recognised by a re ***
> --- *** combinase, which inverts the region flan ***
> --- *** ked by a pair of sites.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_site AS
>   SELECT
>     feature_id AS inversion_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'FRT_site' OR cvterm.name = 'inversion_site';
> 
> --- ************************************************
> --- *** relation: dif_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A site at which replicated bacterial cir ***
> --- *** cular chromosomes are decatenated by sit ***
> --- *** e specific resolvase.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW dif_site AS
>   SELECT
>     feature_id AS dif_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dif_site';
> 
> --- ************************************************
> --- *** relation: attc_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attC site is a sequence required for  ***
> --- *** the integration of a DNA of an integron. ***
> --- ************************************************
> ---
> 
> CREATE VIEW attc_site AS
>   SELECT
>     feature_id AS attc_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attC_site';
> 
> --- ************************************************
> --- *** relation: eukaryotic_terminator ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW eukaryotic_terminator AS
>   SELECT
>     feature_id AS eukaryotic_terminator_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'terminator_of_type_2_RNApol_III_promoter' OR cvterm.name = 'eukaryotic_terminator';
> 
> --- ************************************************
> --- *** relation: oriv ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An origin of vegetative replication in p ***
> --- *** lasmids and phages.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW oriv AS
>   SELECT
>     feature_id AS oriv_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'oriV';
> 
> --- ************************************************
> --- *** relation: oric ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An origin of bacterial chromosome replic ***
> --- *** ation.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW oric AS
>   SELECT
>     feature_id AS oric_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'oriC';
> 
> --- ************************************************
> --- *** relation: dna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, DNA molecule.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW dna_chromosome AS
>   SELECT
>     feature_id AS dna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'double_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_DNA_chromosome' OR cvterm.name = 'linear_double_stranded_DNA_chromosome' OR cvterm.name = 'circular_double_stranded_DNA_chromosome' OR cvterm.name = 'linear_single_stranded_DNA_chromosome' OR cvterm.name = 'circular_single_stranded_DNA_chromosome' OR cvterm.name = 'DNA_chromosome';
> 
> --- ************************************************
> --- *** relation: double_stranded_dna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, double-stranded DNA molecule.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW double_stranded_dna_chromosome AS
>   SELECT
>     feature_id AS double_stranded_dna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear_double_stranded_DNA_chromosome' OR cvterm.name = 'circular_double_stranded_DNA_chromosome' OR cvterm.name = 'double_stranded_DNA_chromosome';
> 
> --- ************************************************
> --- *** relation: single_stranded_dna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, single-stranded DNA molecule.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW single_stranded_dna_chromosome AS
>   SELECT
>     feature_id AS single_stranded_dna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear_single_stranded_DNA_chromosome' OR cvterm.name = 'circular_single_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_DNA_chromosome';
> 
> --- ************************************************
> --- *** relation: linear_double_stranded_dna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, double-stranded, linear DNA mole ***
> --- *** cule.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW linear_double_stranded_dna_chromosome AS
>   SELECT
>     feature_id AS linear_double_stranded_dna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear_double_stranded_DNA_chromosome';
> 
> --- ************************************************
> --- *** relation: circular_double_stranded_dna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, double-stranded, circular DNA mo ***
> --- *** lecule.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW circular_double_stranded_dna_chromosome AS
>   SELECT
>     feature_id AS circular_double_stranded_dna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'circular_double_stranded_DNA_chromosome';
> 
> --- ************************************************
> --- *** relation: linear_single_stranded_dna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, single-stranded, linear DNA mole ***
> --- *** cule.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW linear_single_stranded_dna_chromosome AS
>   SELECT
>     feature_id AS linear_single_stranded_dna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear_single_stranded_DNA_chromosome';
> 
> --- ************************************************
> --- *** relation: circular_single_stranded_dna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, single-stranded, circular DNA mo ***
> --- *** lecule.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW circular_single_stranded_dna_chromosome AS
>   SELECT
>     feature_id AS circular_single_stranded_dna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'circular_single_stranded_DNA_chromosome';
> 
> --- ************************************************
> --- *** relation: rna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, RNA molecule.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna_chromosome AS
>   SELECT
>     feature_id AS rna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'single_stranded_RNA_chromosome' OR cvterm.name = 'double_stranded_RNA_chromosome' OR cvterm.name = 'linear_single_stranded_RNA_chromosome' OR cvterm.name = 'circular_single_stranded_RNA_chromosome' OR cvterm.name = 'linear_double_stranded_RNA_chromosome' OR cvterm.name = 'circular_double_stranded_RNA_chromosome' OR cvterm.name = 'RNA_chromosome';
> 
> --- ************************************************
> --- *** relation: single_stranded_rna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, single-stranded RNA molecule.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW single_stranded_rna_chromosome AS
>   SELECT
>     feature_id AS single_stranded_rna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear_single_stranded_RNA_chromosome' OR cvterm.name = 'circular_single_stranded_RNA_chromosome' OR cvterm.name = 'single_stranded_RNA_chromosome';
> 
> --- ************************************************
> --- *** relation: linear_single_stranded_rna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, single-stranded, linear RNA mole ***
> --- *** cule.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW linear_single_stranded_rna_chromosome AS
>   SELECT
>     feature_id AS linear_single_stranded_rna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear_single_stranded_RNA_chromosome';
> 
> --- ************************************************
> --- *** relation: linear_double_stranded_rna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, double-stranded, linear RNA mole ***
> --- *** cule.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW linear_double_stranded_rna_chromosome AS
>   SELECT
>     feature_id AS linear_double_stranded_rna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear_double_stranded_RNA_chromosome';
> 
> --- ************************************************
> --- *** relation: double_stranded_rna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, double-stranded RNA molecule.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW double_stranded_rna_chromosome AS
>   SELECT
>     feature_id AS double_stranded_rna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear_double_stranded_RNA_chromosome' OR cvterm.name = 'circular_double_stranded_RNA_chromosome' OR cvterm.name = 'double_stranded_RNA_chromosome';
> 
> --- ************************************************
> --- *** relation: circular_single_stranded_rna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, single-stranded, circular DNA mo ***
> --- *** lecule.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW circular_single_stranded_rna_chromosome AS
>   SELECT
>     feature_id AS circular_single_stranded_rna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'circular_single_stranded_RNA_chromosome';
> 
> --- ************************************************
> --- *** relation: circular_double_stranded_rna_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Structural unit composed of a self-repli ***
> --- *** cating, double-stranded, circular RNA mo ***
> --- *** lecule.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW circular_double_stranded_rna_chromosome AS
>   SELECT
>     feature_id AS circular_double_stranded_rna_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'circular_double_stranded_RNA_chromosome';
> 
> --- ************************************************
> --- *** relation: insertion_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A terminal_inverted_repeat_element that  ***
> --- *** is bacterial and only encodes the functi ***
> --- *** ons required for its transposition betwe ***
> --- *** en these inverted repeats.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW insertion_sequence AS
>   SELECT
>     feature_id AS insertion_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'insertion_sequence';
> 
> --- ************************************************
> --- *** relation: minicircle_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW minicircle_gene AS
>   SELECT
>     feature_id AS minicircle_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minicircle_gene';
> 
> --- ************************************************
> --- *** relation: cryptic ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A feature_attribute describing a feature ***
> --- ***  that is not manifest under normal condi ***
> --- *** tions.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW cryptic AS
>   SELECT
>     feature_id AS cryptic_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cryptic';
> 
> --- ************************************************
> --- *** relation: anchor_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW anchor_binding_site AS
>   SELECT
>     feature_id AS anchor_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'anchor_binding_site';
> 
> --- ************************************************
> --- *** relation: template_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a guide_RNA that specifies t ***
> --- *** he insertions and deletions of bases in  ***
> --- *** the editing of a target mRNA.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW template_region AS
>   SELECT
>     feature_id AS template_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'template_region';
> 
> --- ************************************************
> --- *** relation: grna_encoding ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non-protein_coding gene that encodes a ***
> --- ***  guide_RNA.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW grna_encoding AS
>   SELECT
>     feature_id AS grna_encoding_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gRNA_encoding';
> 
> --- ************************************************
> --- *** relation: minicircle ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A minicircle is a replicon, part of a ki ***
> --- *** netoplast, that encodes for guide RNAs.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW minicircle AS
>   SELECT
>     feature_id AS minicircle_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minicircle';
> 
> --- ************************************************
> --- *** relation: rho_dependent_bacterial_terminator ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW rho_dependent_bacterial_terminator AS
>   SELECT
>     feature_id AS rho_dependent_bacterial_terminator_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rho_dependent_bacterial_terminator';
> 
> --- ************************************************
> --- *** relation: rho_independent_bacterial_terminator ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW rho_independent_bacterial_terminator AS
>   SELECT
>     feature_id AS rho_independent_bacterial_terminator_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rho_independent_bacterial_terminator';
> 
> --- ************************************************
> --- *** relation: strand_attribute ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW strand_attribute AS
>   SELECT
>     feature_id AS strand_attribute_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'single' OR cvterm.name = 'double' OR cvterm.name = 'strand_attribute';
> 
> --- ************************************************
> --- *** relation: single ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW single AS
>   SELECT
>     feature_id AS single_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'single';
> 
> --- ************************************************
> --- *** relation: double ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW double AS
>   SELECT
>     feature_id AS double_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'double';
> 
> --- ************************************************
> --- *** relation: topology_attribute ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW topology_attribute AS
>   SELECT
>     feature_id AS topology_attribute_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear' OR cvterm.name = 'circular' OR cvterm.name = 'topology_attribute';
> 
> --- ************************************************
> --- *** relation: linear ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A quality of a nucleotide polymer that h ***
> --- *** as a 3'-terminal residue and a 5'-termin ***
> --- *** al residue.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW linear AS
>   SELECT
>     feature_id AS linear_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'linear';
> 
> --- ************************************************
> --- *** relation: circular ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A quality of a nucleotide polymer that h ***
> --- *** as no terminal nucleotide residues.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW circular AS
>   SELECT
>     feature_id AS circular_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'circular';
> 
> --- ************************************************
> --- *** relation: class_ii_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Small non-coding RNA (59-60 nt long) con ***
> --- *** taining 5' and 3' ends that are predicte ***
> --- *** d to come together to form a stem struct ***
> --- *** ure. Identified in the social amoeba Dic ***
> --- *** tyostelium discoideum and localized in t ***
> --- *** he cytoplasm.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW class_ii_rna AS
>   SELECT
>     feature_id AS class_ii_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'class_II_RNA';
> 
> --- ************************************************
> --- *** relation: class_i_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Small non-coding RNA (55-65 nt long) con ***
> --- *** taining highly conserved 5' and 3' ends  ***
> --- *** (16 and 8 nt, respectively) that are pre ***
> --- *** dicted to come together to form a stem s ***
> --- *** tructure. Identified in the social amoeb ***
> --- *** a Dictyostelium discoideum and localized ***
> --- ***  in the cytoplasm.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW class_i_rna AS
>   SELECT
>     feature_id AS class_i_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'class_I_RNA';
> 
> --- ************************************************
> --- *** relation: genomic_dna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW genomic_dna AS
>   SELECT
>     feature_id AS genomic_dna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'genomic_DNA';
> 
> --- ************************************************
> --- *** relation: bac_cloned_genomic_insert ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW bac_cloned_genomic_insert AS
>   SELECT
>     feature_id AS bac_cloned_genomic_insert_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'BAC_cloned_genomic_insert';
> 
> --- ************************************************
> --- *** relation: consensus ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW consensus AS
>   SELECT
>     feature_id AS consensus_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'consensus';
> 
> --- ************************************************
> --- *** relation: consensus_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW consensus_region AS
>   SELECT
>     feature_id AS consensus_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'consensus_mRNA' OR cvterm.name = 'consensus_region';
> 
> --- ************************************************
> --- *** relation: consensus_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW consensus_mrna AS
>   SELECT
>     feature_id AS consensus_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'consensus_mRNA';
> 
> --- ************************************************
> --- *** relation: predicted_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW predicted_gene AS
>   SELECT
>     feature_id AS predicted_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'predicted_gene';
> 
> --- ************************************************
> --- *** relation: gene_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_fragment AS
>   SELECT
>     feature_id AS gene_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_fragment';
> 
> --- ************************************************
> --- *** relation: recursive_splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recursive splice site is a splice site ***
> --- ***  which subdivides a large intron. Recurs ***
> --- *** ive splicing is a mechanism that splices ***
> --- ***  large introns by sub dividing the intro ***
> --- *** n at non exonic elements and alternate e ***
> --- *** xons.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW recursive_splice_site AS
>   SELECT
>     feature_id AS recursive_splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'recursive_splice_site';
> 
> --- ************************************************
> --- *** relation: bac_end ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of sequence from the end of a B ***
> --- *** AC clone that may provide a highly speci ***
> --- *** fic marker.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW bac_end AS
>   SELECT
>     feature_id AS bac_end_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'BAC_end';
> 
> --- ************************************************
> --- *** relation: rrna_16s ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A large polynucleotide in Bacteria and A ***
> --- *** rchaea, which functions as the small sub ***
> --- *** unit of the ribosome.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_16s AS
>   SELECT
>     feature_id AS rrna_16s_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_16S';
> 
> --- ************************************************
> --- *** relation: rrna_23s ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A large polynucleotide in Bacteria and A ***
> --- *** rchaea, which functions as the large sub ***
> --- *** unit of the ribosome.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_23s AS
>   SELECT
>     feature_id AS rrna_23s_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_23S';
> 
> --- ************************************************
> --- *** relation: rrna_25s ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A large polynucleotide which functions a ***
> --- *** s part of the large subunit of the ribos ***
> --- *** ome in some eukaryotes.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_25s AS
>   SELECT
>     feature_id AS rrna_25s_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_25S';
> 
> --- ************************************************
> --- *** relation: solo_ltr ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recombination product between the 2 LT ***
> --- *** R of the same element.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW solo_ltr AS
>   SELECT
>     feature_id AS solo_ltr_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'solo_LTR';
> 
> --- ************************************************
> --- *** relation: low_complexity ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW low_complexity AS
>   SELECT
>     feature_id AS low_complexity_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'low_complexity';
> 
> --- ************************************************
> --- *** relation: low_complexity_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW low_complexity_region AS
>   SELECT
>     feature_id AS low_complexity_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'low_complexity_region';
> 
> --- ************************************************
> --- *** relation: prophage ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A phage genome after it has established  ***
> --- *** in the host genome in a latent/immune st ***
> --- *** ate either as a plasmid or as an integra ***
> --- *** ted "island".                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW prophage AS
>   SELECT
>     feature_id AS prophage_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'prophage';
> 
> --- ************************************************
> --- *** relation: cryptic_prophage ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A remnant of an integrated prophage in t ***
> --- *** he host genome or an "island" in the hos ***
> --- *** t genome that includes phage like-genes. ***
> --- ************************************************
> ---
> 
> CREATE VIEW cryptic_prophage AS
>   SELECT
>     feature_id AS cryptic_prophage_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cryptic_prophage';
> 
> --- ************************************************
> --- *** relation: tetraloop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A base-paired stem with loop of 4 non-hy ***
> --- *** drogen bonded nucleotides.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW tetraloop AS
>   SELECT
>     feature_id AS tetraloop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tetraloop';
> 
> --- ************************************************
> --- *** relation: dna_constraint_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A double-stranded DNA used to control ma ***
> --- *** cromolecular structure and function.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW dna_constraint_sequence AS
>   SELECT
>     feature_id AS dna_constraint_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DNA_constraint_sequence';
> 
> --- ************************************************
> --- *** relation: i_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cytosine rich domain whereby strands a ***
> --- *** ssociate both inter- and intramolecularl ***
> --- *** y at moderately acidic pH.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW i_motif AS
>   SELECT
>     feature_id AS i_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'i_motif';
> 
> --- ************************************************
> --- *** relation: pna_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Peptide nucleic acid, is a chemical not  ***
> --- *** known to occur naturally but is artifici ***
> --- *** ally synthesized and used in some biolog ***
> --- *** ical research and medical treatments. Th ***
> --- *** e PNA backbone is composed of repeating  ***
> --- *** N-(2-aminoethyl)-glycine units linked by ***
> --- ***  peptide bonds. The purine and pyrimidin ***
> --- *** e bases are linked to the backbone by me ***
> --- *** thylene carbonyl bonds.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW pna_oligo AS
>   SELECT
>     feature_id AS pna_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'PNA_oligo';
> 
> --- ************************************************
> --- *** relation: dnazyme ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA sequence with catalytic activity.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW dnazyme AS
>   SELECT
>     feature_id AS dnazyme_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DNAzyme';
> 
> --- ************************************************
> --- *** relation: mnp ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A multiple nucleotide polymorphism with  ***
> --- *** alleles of common length > 1, for exampl ***
> --- *** e AAA/TTT.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW mnp AS
>   SELECT
>     feature_id AS mnp_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'MNP';
> 
> --- ************************************************
> --- *** relation: intron_domain ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW intron_domain AS
>   SELECT
>     feature_id AS intron_domain_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_guide_sequence' OR cvterm.name = 'mirtron' OR cvterm.name = 'intron_domain';
> 
> --- ************************************************
> --- *** relation: wobble_base_pair ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A type of non-canonical base pairing, mo ***
> --- *** st commonly between G and U, which is im ***
> --- *** portant for the secondary structure of R ***
> --- *** NAs. It has similar thermodynamic stabil ***
> --- *** ity to the Watson-Crick pairing. Wobble  ***
> --- *** base pairs only have two hydrogen bonds. ***
> --- ***  Other wobble base pair possibilities ar ***
> --- *** e I-A, I-U and I-C.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW wobble_base_pair AS
>   SELECT
>     feature_id AS wobble_base_pair_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'wobble_base_pair';
> 
> --- ************************************************
> --- *** relation: internal_guide_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A purine-rich sequence in the group I in ***
> --- *** trons which determines the locations of  ***
> --- *** the splice sites in group I intron splic ***
> --- *** ing and has catalytic activity.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW internal_guide_sequence AS
>   SELECT
>     feature_id AS internal_guide_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_guide_sequence';
> 
> --- ************************************************
> --- *** relation: silent_mutation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW silent_mutation AS
>   SELECT
>     feature_id AS silent_mutation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'silent_mutation';
> 
> --- ************************************************
> --- *** relation: epitope ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a macromolecule that is reco ***
> --- *** gnized by the immune system.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW epitope AS
>   SELECT
>     feature_id AS epitope_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'epitope';
> 
> --- ************************************************
> --- *** relation: copy_number_variation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A variation that increases or decreases  ***
> --- *** the copy number of a given region.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW copy_number_variation AS
>   SELECT
>     feature_id AS copy_number_variation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'copy_number_variation';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_copy_number ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_copy_number AS
>   SELECT
>     feature_id AS sequence_variant_affecting_copy_number_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_copy_number';
> 
> --- ************************************************
> --- *** relation: chromosome_breakpoint ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome_breakpoint AS
>   SELECT
>     feature_id AS chromosome_breakpoint_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_breakpoint' OR cvterm.name = 'translocation_breakpoint' OR cvterm.name = 'insertion_breakpoint' OR cvterm.name = 'deletion_breakpoint' OR cvterm.name = 'chromosome_breakpoint';
> 
> --- ************************************************
> --- *** relation: inversion_breakpoint ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The point within a chromosome where an i ***
> --- *** nversion begins or ends.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_breakpoint AS
>   SELECT
>     feature_id AS inversion_breakpoint_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_breakpoint';
> 
> --- ************************************************
> --- *** relation: allele ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An allele is one of a set of coexisting  ***
> --- *** sequence variants of a gene.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW allele AS
>   SELECT
>     feature_id AS allele_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'allele';
> 
> --- ************************************************
> --- *** relation: haplotype ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A haplotype is one of a set of coexistin ***
> --- *** g sequence variants of a haplotype block ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW haplotype AS
>   SELECT
>     feature_id AS haplotype_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'haplotype';
> 
> --- ************************************************
> --- *** relation: polymorphic_sequence_variant ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variant that is segregating i ***
> --- *** n one or more natural populations of a s ***
> --- *** pecies.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW polymorphic_sequence_variant AS
>   SELECT
>     feature_id AS polymorphic_sequence_variant_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polymorphic_sequence_variant';
> 
> --- ************************************************
> --- *** relation: genome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A genome is the sum of genetic material  ***
> --- *** within a cell or virion.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW genome AS
>   SELECT
>     feature_id AS genome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'genome';
> 
> --- ************************************************
> --- *** relation: genotype ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A genotype is a variant genome, complete ***
> --- ***  or incomplete.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW genotype AS
>   SELECT
>     feature_id AS genotype_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'diplotype' OR cvterm.name = 'genotype';
> 
> --- ************************************************
> --- *** relation: diplotype ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A diplotype is a pair of haplotypes from ***
> --- ***  a given individual. It is a genotype wh ***
> --- *** ere the phase is known.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW diplotype AS
>   SELECT
>     feature_id AS diplotype_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'diplotype';
> 
> --- ************************************************
> --- *** relation: direction_attribute ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW direction_attribute AS
>   SELECT
>     feature_id AS direction_attribute_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'forward' OR cvterm.name = 'reverse' OR cvterm.name = 'direction_attribute';
> 
> --- ************************************************
> --- *** relation: forward ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Forward is an attribute of the feature,  ***
> --- *** where the feature is in the 5' to 3' dir ***
> --- *** ection.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW forward AS
>   SELECT
>     feature_id AS forward_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'forward';
> 
> --- ************************************************
> --- *** relation: reverse ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Reverse is an attribute of the feature,  ***
> --- *** where the feature is in the 3' to 5' dir ***
> --- *** ection. Again could be applied to primer ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW reverse AS
>   SELECT
>     feature_id AS reverse_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'reverse';
> 
> --- ************************************************
> --- *** relation: mitochondrial_dna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW mitochondrial_dna AS
>   SELECT
>     feature_id AS mitochondrial_dna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mitochondrial_DNA';
> 
> --- ************************************************
> --- *** relation: chloroplast_dna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chloroplast_dna AS
>   SELECT
>     feature_id AS chloroplast_dna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chloroplast_DNA';
> 
> --- ************************************************
> --- *** relation: mirtron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A debranched intron which mimics the str ***
> --- *** ucture of pre-miRNA and enters the miRNA ***
> --- ***  processing pathway without Drosha media ***
> --- *** ted cleavage.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirtron AS
>   SELECT
>     feature_id AS mirtron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mirtron';
> 
> --- ************************************************
> --- *** relation: pirna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A small non coding RNA, part of a silenc ***
> --- *** ing system that prevents the spreading o ***
> --- *** f selfish genetic elements.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW pirna AS
>   SELECT
>     feature_id AS pirna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'piRNA';
> 
> --- ************************************************
> --- *** relation: arginyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has an arginine ant ***
> --- *** icodon, and a 3' arginine binding region ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW arginyl_trna AS
>   SELECT
>     feature_id AS arginyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'arginyl_tRNA';
> 
> --- ************************************************
> --- *** relation: mobile_genetic_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A nucleotide region with either intra-ge ***
> --- *** nome or intracellular moblity, of varyin ***
> --- *** g length, which often carry the informat ***
> --- *** ion necessary for transfer and recombina ***
> --- *** tion with the host genome.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW mobile_genetic_element AS
>   SELECT
>     feature_id AS mobile_genetic_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mobile_intron' OR cvterm.name = 'extrachromosomal_mobile_genetic_element' OR cvterm.name = 'integrated_mobile_genetic_element' OR cvterm.name = 'viral_sequence' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'transposable_element' OR cvterm.name = 'proviral_region' OR cvterm.name = 'integron' OR cvterm.name = 'genomic_island' OR cvterm.name = 'integrated_plasmid' OR cvterm.name = 'cointegrated_plasmid' OR cvterm.name = 'retrotransposon' OR cvterm.name = 'DNA_transposon' OR cvterm.name = 'foreign_transposable_element' OR cvterm.name = 'transgenic_transposable_element' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'transposon_fragment' OR cvterm.name = 'LTR_retrotransposon' OR cvterm.name = 'non_LTR_retrotransposon' OR cvterm.name = 'RR_tract' OR cvterm.name = 'LINE_element' OR cvterm.name = 'SINE_element' OR cvterm.name = 'terminal_inverted_repeat_element' OR cvterm.name = 'foldback_element' OR cvterm.name = 'conjugative_transposon' OR cvterm.name = 'helitron' OR cvterm.name = 'MITE' OR cvterm.name = 'insertion_sequence' OR cvterm.name = 'polinton' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'prophage' OR cvterm.name = 'pathogenic_island' OR cvterm.name = 'metabolic_island' OR cvterm.name = 'adaptive_island' OR cvterm.name = 'symbiosis_island' OR cvterm.name = 'cryptic_prophage' OR cvterm.name = 'defective_conjugative_transposon' OR cvterm.name = 'mobile_genetic_element';
> 
> --- ************************************************
> --- *** relation: extrachromosomal_mobile_genetic_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An MGE that is not integrated into the h ***
> --- *** ost chromosome.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW extrachromosomal_mobile_genetic_element AS
>   SELECT
>     feature_id AS extrachromosomal_mobile_genetic_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'viral_sequence' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'extrachromosomal_mobile_genetic_element';
> 
> --- ************************************************
> --- *** relation: integrated_mobile_genetic_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An MGE that is integrated into the host  ***
> --- *** chromosome.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW integrated_mobile_genetic_element AS
>   SELECT
>     feature_id AS integrated_mobile_genetic_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transposable_element' OR cvterm.name = 'proviral_region' OR cvterm.name = 'integron' OR cvterm.name = 'genomic_island' OR cvterm.name = 'integrated_plasmid' OR cvterm.name = 'cointegrated_plasmid' OR cvterm.name = 'retrotransposon' OR cvterm.name = 'DNA_transposon' OR cvterm.name = 'foreign_transposable_element' OR cvterm.name = 'transgenic_transposable_element' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'transposon_fragment' OR cvterm.name = 'LTR_retrotransposon' OR cvterm.name = 'non_LTR_retrotransposon' OR cvterm.name = 'RR_tract' OR cvterm.name = 'LINE_element' OR cvterm.name = 'SINE_element' OR cvterm.name = 'terminal_inverted_repeat_element' OR cvterm.name = 'foldback_element' OR cvterm.name = 'conjugative_transposon' OR cvterm.name = 'helitron' OR cvterm.name = 'MITE' OR cvterm.name = 'insertion_sequence' OR cvterm.name = 'polinton' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'prophage' OR cvterm.name = 'pathogenic_island' OR cvterm.name = 'metabolic_island' OR cvterm.name = 'adaptive_island' OR cvterm.name = 'symbiosis_island' OR cvterm.name = 'cryptic_prophage' OR cvterm.name = 'defective_conjugative_transposon' OR cvterm.name = 'integrated_mobile_genetic_element';
> 
> --- ************************************************
> --- *** relation: integrated_plasmid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A plasmid sequence that is integrated wi ***
> --- *** thin the host chromosome.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW integrated_plasmid AS
>   SELECT
>     feature_id AS integrated_plasmid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'integrated_plasmid';
> 
> --- ************************************************
> --- *** relation: viral_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of nucleotide sequence of a v ***
> --- *** irus, a submicroscopic particle that rep ***
> --- *** licates by infecting a host cell.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW viral_sequence AS
>   SELECT
>     feature_id AS viral_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'viral_sequence';
> 
> --- ************************************************
> --- *** relation: phage_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The nucleotide sequence of a virus that  ***
> --- *** infects bacteria.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW phage_sequence AS
>   SELECT
>     feature_id AS phage_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'phage_sequence';
> 
> --- ************************************************
> --- *** relation: attctn_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attachment site located on a conjugat ***
> --- *** ive transposon and used for site-specifi ***
> --- *** c integration of a conjugative transposo ***
> --- *** n.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW attctn_site AS
>   SELECT
>     feature_id AS attctn_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attCtn_site';
> 
> --- ************************************************
> --- *** relation: nuclear_mt_pseudogene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A nuclear pseudogene of a mitochndrial g ***
> --- *** ene.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW nuclear_mt_pseudogene AS
>   SELECT
>     feature_id AS nuclear_mt_pseudogene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nuclear_mt_pseudogene';
> 
> --- ************************************************
> --- *** relation: cointegrated_plasmid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A MGE region consisting of two fused pla ***
> --- *** smids resulting from a replicative trans ***
> --- *** position event.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW cointegrated_plasmid AS
>   SELECT
>     feature_id AS cointegrated_plasmid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cointegrated_plasmid';
> 
> --- ************************************************
> --- *** relation: irlinv_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Component of the inversion site located  ***
> --- *** at the left of a region susceptible to s ***
> --- *** ite-specific inversion.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW irlinv_site AS
>   SELECT
>     feature_id AS irlinv_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'IRLinv_site';
> 
> --- ************************************************
> --- *** relation: irrinv_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Component of the inversion site located  ***
> --- *** at the right of a region susceptible to  ***
> --- *** site-specific inversion.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW irrinv_site AS
>   SELECT
>     feature_id AS irrinv_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'IRRinv_site';
> 
> --- ************************************************
> --- *** relation: inversion_site_part ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region located within an inversion sit ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_site_part AS
>   SELECT
>     feature_id AS inversion_site_part_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'IRLinv_site' OR cvterm.name = 'IRRinv_site' OR cvterm.name = 'inversion_site_part';
> 
> --- ************************************************
> --- *** relation: defective_conjugative_transposon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An island that contains genes for integr ***
> --- *** ation/excision and the gene and site for ***
> --- ***  the initiation of intercellular transfe ***
> --- *** r by conjugation. It can be complemented ***
> --- ***  for transfer by a conjugative transposo ***
> --- *** n.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW defective_conjugative_transposon AS
>   SELECT
>     feature_id AS defective_conjugative_transposon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'defective_conjugative_transposon';
> 
> --- ************************************************
> --- *** relation: repeat_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A portion of a repeat, interrupted by th ***
> --- *** e insertion of another element.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW repeat_fragment AS
>   SELECT
>     feature_id AS repeat_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'repeat_fragment';
> 
> --- ************************************************
> --- *** relation: transposon_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW transposon_fragment AS
>   SELECT
>     feature_id AS transposon_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transposon_fragment';
> 
> --- ************************************************
> --- *** relation: transcriptional_cis_regulatory_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A regulatory_region that modulates the t ***
> --- *** ranscription of a gene or genes.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcriptional_cis_regulatory_region AS
>   SELECT
>     feature_id AS transcriptional_cis_regulatory_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'promoter' OR cvterm.name = 'insulator' OR cvterm.name = 'CRM' OR cvterm.name = 'promoter_targeting_sequence' OR cvterm.name = 'bidirectional_promoter' OR cvterm.name = 'RNA_polymerase_promoter' OR cvterm.name = 'RNApol_I_promoter' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'Phage_RNA_Polymerase_Promoter' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'SP6_RNA_Polymerase_Promoter' OR cvterm.name = 'T3_RNA_Polymerase_Promoter' OR cvterm.name = 'T7_RNA_Polymerase_Promoter' OR cvterm.name = 'locus_control_region' OR cvterm.name = 'enhancer' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'silencer' OR cvterm.name = 'enhancer_bound_by_factor' OR cvterm.name = 'shadow_enhancer' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'transcriptional_cis_regulatory_region';
> 
> --- ************************************************
> --- *** relation: splicing_regulatory_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A regulatory_region that modulates splic ***
> --- *** ing.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW splicing_regulatory_region AS
>   SELECT
>     feature_id AS splicing_regulatory_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'splice_enhancer' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'exonic_splice_enhancer' OR cvterm.name = 'splicing_regulatory_region';
> 
> --- ************************************************
> --- *** relation: promoter_targeting_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcriptional_cis_regulatory_region  ***
> --- *** that restricts the activity of a CRM to  ***
> --- *** a single promoter and which functions on ***
> --- *** ly when both itself and an insulator are ***
> --- ***  located between the CRM and the promote ***
> --- *** r.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW promoter_targeting_sequence AS
>   SELECT
>     feature_id AS promoter_targeting_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'promoter_targeting_sequence';
> 
> --- ************************************************
> --- *** relation: sequence_alteration ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_alteration is a sequence_feat ***
> --- *** ure whose extent is the deviation from a ***
> --- *** nother sequence.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_alteration AS
>   SELECT
>     feature_id AS sequence_alteration_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deletion' OR cvterm.name = 'translocation' OR cvterm.name = 'insertion' OR cvterm.name = 'substitution' OR cvterm.name = 'uncharacterised_change_in_nucleotide_sequence' OR cvterm.name = 'indel' OR cvterm.name = 'inversion' OR cvterm.name = 'transgenic_insertion' OR cvterm.name = 'sequence_length_variation' OR cvterm.name = 'SNP' OR cvterm.name = 'complex_substitution' OR cvterm.name = 'point_mutation' OR cvterm.name = 'simple_sequence_length_variation' OR cvterm.name = 'MNP' OR cvterm.name = 'transition' OR cvterm.name = 'transversion' OR cvterm.name = 'pyrimidine_transition' OR cvterm.name = 'purine_transition' OR cvterm.name = 'C_to_T_transition' OR cvterm.name = 'T_to_C_transition' OR cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'A_to_G_transition' OR cvterm.name = 'G_to_A_transition' OR cvterm.name = 'pyrimidine_to_purine_transversion' OR cvterm.name = 'purine_to_pyrimidine_transversion' OR cvterm.name = 'C_to_A_transversion' OR cvterm.name = 'C_to_G_transversion' OR cvterm.name = 'T_to_A_transversion' OR cvterm.name = 'T_to_G_transversion' OR cvterm.name = 'A_to_C_transversion' OR cvterm.name = 'A_to_T_transversion' OR cvterm.name = 'G_to_C_transversion' OR cvterm.name = 'G_to_T_transversion' OR cvterm.name = 'partially_characterised_change_in_DNA_sequence' OR cvterm.name = 'nucleotide_deletion' OR cvterm.name = 'nucleotide_insertion' OR cvterm.name = 'nucleotide_duplication' OR cvterm.name = 'sequence_alteration';
> 
> --- ************************************************
> --- *** relation: sequence_variant ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_variant is a non exact copy o ***
> --- *** f a sequence_feature or genome exhibitin ***
> --- *** g one or more sequence_alteration.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant AS
>   SELECT
>     feature_id AS sequence_variant_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'copy_number_variation' OR cvterm.name = 'allele' OR cvterm.name = 'haplotype' OR cvterm.name = 'polymorphic_sequence_variant' OR cvterm.name = 'genotype' OR cvterm.name = 'diplotype' OR cvterm.name = 'sequence_variant';
> 
> --- ************************************************
> --- *** relation: propeptide_cleavage_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The propeptide_cleavage_site is the argi ***
> --- *** nine/lysine boundary on a propeptide whe ***
> --- *** re cleavage occurs.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW propeptide_cleavage_site AS
>   SELECT
>     feature_id AS propeptide_cleavage_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'propeptide_cleavage_site';
> 
> --- ************************************************
> --- *** relation: propeptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Part of a peptide chain which is cleaved ***
> --- ***  off during the formation of the mature  ***
> --- *** protein.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW propeptide AS
>   SELECT
>     feature_id AS propeptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'propeptide';
> 
> --- ************************************************
> --- *** relation: immature_peptide_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An immature_peptide_region is the extent ***
> --- ***  of the peptide after it has been transl ***
> --- *** ated and before any processing occurs.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW immature_peptide_region AS
>   SELECT
>     feature_id AS immature_peptide_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'immature_peptide_region';
> 
> --- ************************************************
> --- *** relation: active_peptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Active peptides are proteins which are b ***
> --- *** iologically active, released from a prec ***
> --- *** ursor molecule.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW active_peptide AS
>   SELECT
>     feature_id AS active_peptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'active_peptide';
> 
> --- ************************************************
> --- *** relation: compositionally_biased_region_of_peptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Polypeptide region that is rich in a par ***
> --- *** ticular amino acid or homopolymeric and  ***
> --- *** greater than three residues in length.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW compositionally_biased_region_of_peptide AS
>   SELECT
>     feature_id AS compositionally_biased_region_of_peptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'compositionally_biased_region_of_peptide';
> 
> --- ************************************************
> --- *** relation: polypeptide_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence motif is a short (up to 20 am ***
> --- *** ino acids) region of biological interest ***
> --- *** . Such motifs, although they are too sho ***
> --- *** rt to constitute functional domains, sha ***
> --- *** re sequence similarities and are conserv ***
> --- *** ed in different proteins. They display a ***
> --- ***  common function (protein-binding, subce ***
> --- *** llular location etc.).                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_motif AS
>   SELECT
>     feature_id AS polypeptide_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'biochemical_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_motif' OR cvterm.name = 'post_translationally_modified_region' OR cvterm.name = 'conformational_switch' OR cvterm.name = 'molecular_contact_region' OR cvterm.name = 'polypeptide_binding_motif' OR cvterm.name = 'polypeptide_catalytic_motif' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'polypeptide_motif';
> 
> --- ************************************************
> --- *** relation: polypeptide_repeat ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A polypeptide_repeat is a single copy of ***
> --- ***  an internal sequence repetition.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_repeat AS
>   SELECT
>     feature_id AS polypeptide_repeat_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_repeat';
> 
> --- ************************************************
> --- *** relation: polypeptide_structural_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Region of polypeptide with a given struc ***
> --- *** tural property.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_structural_region AS
>   SELECT
>     feature_id AS polypeptide_structural_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_domain' OR cvterm.name = 'membrane_structure' OR cvterm.name = 'extramembrane_polypeptide_region' OR cvterm.name = 'intramembrane_polypeptide_region' OR cvterm.name = 'polypeptide_secondary_structure' OR cvterm.name = 'polypeptide_structural_motif' OR cvterm.name = 'intrinsically_unstructured_polypeptide_region' OR cvterm.name = 'cytoplasmic_polypeptide_region' OR cvterm.name = 'non_cytoplasmic_polypeptide_region' OR cvterm.name = 'membrane_peptide_loop' OR cvterm.name = 'transmembrane_polypeptide_region' OR cvterm.name = 'asx_motif' OR cvterm.name = 'beta_bulge' OR cvterm.name = 'beta_bulge_loop' OR cvterm.name = 'beta_strand' OR cvterm.name = 'peptide_helix' OR cvterm.name = 'polypeptide_nest_motif' OR cvterm.name = 'schellmann_loop' OR cvterm.name = 'serine_threonine_motif' OR cvterm.name = 'serine_threonine_staple_motif' OR cvterm.name = 'polypeptide_turn_motif' OR cvterm.name = 'catmat_left_handed_three' OR cvterm.name = 'catmat_left_handed_four' OR cvterm.name = 'catmat_right_handed_three' OR cvterm.name = 'catmat_right_handed_four' OR cvterm.name = 'alpha_beta_motif' OR cvterm.name = 'peptide_coil' OR cvterm.name = 'beta_bulge_loop_five' OR cvterm.name = 'beta_bulge_loop_six' OR cvterm.name = 'antiparallel_beta_strand' OR cvterm.name = 'parallel_beta_strand' OR cvterm.name = 'left_handed_peptide_helix' OR cvterm.name = 'right_handed_peptide_helix' OR cvterm.name = 'alpha_helix' OR cvterm.name = 'pi_helix' OR cvterm.name = 'three_ten_helix' OR cvterm.name = 'polypeptide_nest_left_right_motif' OR cvterm.name = 'polypeptide_nest_right_left_motif' OR cvterm.name = 'schellmann_loop_seven' OR cvterm.name = 'schellmann_loop_six' OR cvterm.name = 'asx_turn' OR cvterm.name = 'beta_turn' OR cvterm.name = 'gamma_turn' OR cvterm.name = 'serine_threonine_turn' OR cvterm.name = 'asx_turn_left_handed_type_one' OR cvterm.name = 'asx_turn_left_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_two' OR cvterm.name = 'beta_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_right_handed_type_two' OR cvterm.name = 'beta_turn_type_six' OR cvterm.name = 'beta_turn_type_eight' OR cvterm.name = 'beta_turn_type_six_a' OR cvterm.name = 'beta_turn_type_six_b' OR cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'gamma_turn_classic' OR cvterm.name = 'gamma_turn_inverse' OR cvterm.name = 'st_turn_left_handed_type_one' OR cvterm.name = 'st_turn_left_handed_type_two' OR cvterm.name = 'st_turn_right_handed_type_one' OR cvterm.name = 'st_turn_right_handed_type_two' OR cvterm.name = 'coiled_coil' OR cvterm.name = 'helix_turn_helix' OR cvterm.name = 'polypeptide_structural_region';
> 
> --- ************************************************
> --- *** relation: membrane_structure ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Arrangement of the polypeptide with resp ***
> --- *** ect to the lipid bilayer.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW membrane_structure AS
>   SELECT
>     feature_id AS membrane_structure_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'membrane_structure';
> 
> --- ************************************************
> --- *** relation: extramembrane_polypeptide_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Polypeptide region that is localized out ***
> --- *** side of a lipid bilayer.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW extramembrane_polypeptide_region AS
>   SELECT
>     feature_id AS extramembrane_polypeptide_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cytoplasmic_polypeptide_region' OR cvterm.name = 'non_cytoplasmic_polypeptide_region' OR cvterm.name = 'extramembrane_polypeptide_region';
> 
> --- ************************************************
> --- *** relation: cytoplasmic_polypeptide_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Polypeptide region that is localized ins ***
> --- *** ide the cytoplasm.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW cytoplasmic_polypeptide_region AS
>   SELECT
>     feature_id AS cytoplasmic_polypeptide_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cytoplasmic_polypeptide_region';
> 
> --- ************************************************
> --- *** relation: non_cytoplasmic_polypeptide_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Polypeptide region that is localized out ***
> --- *** side of a lipid bilayer and outside of t ***
> --- *** he cytoplasm.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_cytoplasmic_polypeptide_region AS
>   SELECT
>     feature_id AS non_cytoplasmic_polypeptide_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_cytoplasmic_polypeptide_region';
> 
> --- ************************************************
> --- *** relation: intramembrane_polypeptide_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Polypeptide region present in the lipid  ***
> --- *** bilayer.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW intramembrane_polypeptide_region AS
>   SELECT
>     feature_id AS intramembrane_polypeptide_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'membrane_peptide_loop' OR cvterm.name = 'transmembrane_polypeptide_region' OR cvterm.name = 'intramembrane_polypeptide_region';
> 
> --- ************************************************
> --- *** relation: membrane_peptide_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Polypeptide region localized within the  ***
> --- *** lipid bilayer where both ends traverse t ***
> --- *** he same membrane.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW membrane_peptide_loop AS
>   SELECT
>     feature_id AS membrane_peptide_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'membrane_peptide_loop';
> 
> --- ************************************************
> --- *** relation: transmembrane_polypeptide_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Polypeptide region traversing the lipid  ***
> --- *** bilayer.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW transmembrane_polypeptide_region AS
>   SELECT
>     feature_id AS transmembrane_polypeptide_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transmembrane_polypeptide_region';
> 
> --- ************************************************
> --- *** relation: polypeptide_secondary_structure ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of peptide with secondary struc ***
> --- *** ture has hydrogen bonding along the pept ***
> --- *** ide chain that causes a defined conforma ***
> --- *** tion of the chain.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_secondary_structure AS
>   SELECT
>     feature_id AS polypeptide_secondary_structure_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asx_motif' OR cvterm.name = 'beta_bulge' OR cvterm.name = 'beta_bulge_loop' OR cvterm.name = 'beta_strand' OR cvterm.name = 'peptide_helix' OR cvterm.name = 'polypeptide_nest_motif' OR cvterm.name = 'schellmann_loop' OR cvterm.name = 'serine_threonine_motif' OR cvterm.name = 'serine_threonine_staple_motif' OR cvterm.name = 'polypeptide_turn_motif' OR cvterm.name = 'catmat_left_handed_three' OR cvterm.name = 'catmat_left_handed_four' OR cvterm.name = 'catmat_right_handed_three' OR cvterm.name = 'catmat_right_handed_four' OR cvterm.name = 'alpha_beta_motif' OR cvterm.name = 'peptide_coil' OR cvterm.name = 'beta_bulge_loop_five' OR cvterm.name = 'beta_bulge_loop_six' OR cvterm.name = 'antiparallel_beta_strand' OR cvterm.name = 'parallel_beta_strand' OR cvterm.name = 'left_handed_peptide_helix' OR cvterm.name = 'right_handed_peptide_helix' OR cvterm.name = 'alpha_helix' OR cvterm.name = 'pi_helix' OR cvterm.name = 'three_ten_helix' OR cvterm.name = 'polypeptide_nest_left_right_motif' OR cvterm.name = 'polypeptide_nest_right_left_motif' OR cvterm.name = 'schellmann_loop_seven' OR cvterm.name = 'schellmann_loop_six' OR cvterm.name = 'asx_turn' OR cvterm.name = 'beta_turn' OR cvterm.name = 'gamma_turn' OR cvterm.name = 'serine_threonine_turn' OR cvterm.name = 'asx_turn_left_handed_type_one' OR cvterm.name = 'asx_turn_left_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_two' OR cvterm.name = 'beta_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_right_handed_type_two' OR cvterm.name = 'beta_turn_type_six' OR cvterm.name = 'beta_turn_type_eight' OR cvterm.name = 'beta_turn_type_six_a' OR cvterm.name = 'beta_turn_type_six_b' OR cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'gamma_turn_classic' OR cvterm.name = 'gamma_turn_inverse' OR cvterm.name = 'st_turn_left_handed_type_one' OR cvterm.name = 'st_turn_left_handed_type_two' OR cvterm.name = 'st_turn_right_handed_type_one' OR cvterm.name = 'st_turn_right_handed_type_two' OR cvterm.name = 'polypeptide_secondary_structure';
> 
> --- ************************************************
> --- *** relation: polypeptide_structural_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Motif is a three-dimensional structural  ***
> --- *** element within the chain, which appears  ***
> --- *** also in a variety of other molecules. Un ***
> --- *** like a domain, a motif does not need to  ***
> --- *** form a stable globular unit.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_structural_motif AS
>   SELECT
>     feature_id AS polypeptide_structural_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'coiled_coil' OR cvterm.name = 'helix_turn_helix' OR cvterm.name = 'polypeptide_structural_motif';
> 
> --- ************************************************
> --- *** relation: coiled_coil ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A coiled coil is a structural motif in p ***
> --- *** roteins, in which alpha-helices are coil ***
> --- *** ed together like the strands of a rope.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW coiled_coil AS
>   SELECT
>     feature_id AS coiled_coil_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'coiled_coil';
> 
> --- ************************************************
> --- *** relation: helix_turn_helix ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif comprising two helices separated ***
> --- ***  by a turn.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW helix_turn_helix AS
>   SELECT
>     feature_id AS helix_turn_helix_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'helix_turn_helix';
> 
> --- ************************************************
> --- *** relation: polypeptide_sequencing_information ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Incompatibility in the sequence due to s ***
> --- *** ome experimental problem.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_sequencing_information AS
>   SELECT
>     feature_id AS polypeptide_sequencing_information_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_adjacent_residues' OR cvterm.name = 'non_terminal_residue' OR cvterm.name = 'sequence_conflict' OR cvterm.name = 'sequence_uncertainty' OR cvterm.name = 'polypeptide_sequencing_information';
> 
> --- ************************************************
> --- *** relation: non_adjacent_residues ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Indicates that two consecutive residues  ***
> --- *** in a fragment sequence are not consecuti ***
> --- *** ve in the full-length protein and that t ***
> --- *** here are a number of unsequenced residue ***
> --- *** s between them.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_adjacent_residues AS
>   SELECT
>     feature_id AS non_adjacent_residues_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_adjacent_residues';
> 
> --- ************************************************
> --- *** relation: non_terminal_residue ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The residue at an extremity of the seque ***
> --- *** nce is not the terminal residue.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW non_terminal_residue AS
>   SELECT
>     feature_id AS non_terminal_residue_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'non_terminal_residue';
> 
> --- ************************************************
> --- *** relation: sequence_conflict ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Different sources report differing seque ***
> --- *** nces.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_conflict AS
>   SELECT
>     feature_id AS sequence_conflict_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_conflict';
> 
> --- ************************************************
> --- *** relation: sequence_uncertainty ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Describes the positions in a sequence wh ***
> --- *** ere the authors are unsure about the seq ***
> --- *** uence assignment.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_uncertainty AS
>   SELECT
>     feature_id AS sequence_uncertainty_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_uncertainty';
> 
> --- ************************************************
> --- *** relation: post_translationally_modified_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region where a transformation occurs i ***
> --- *** n a protein after it has been synthesize ***
> --- *** d. This which may regulate, stabilize, c ***
> --- *** rosslink or introduce new chemical funct ***
> --- *** ionalities in the protein.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW post_translationally_modified_region AS
>   SELECT
>     feature_id AS post_translationally_modified_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'post_translationally_modified_region';
> 
> --- ************************************************
> --- *** relation: polypeptide_metal_contact ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue is part of a binding site for a  ***
> --- *** metal ion.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_metal_contact AS
>   SELECT
>     feature_id AS polypeptide_metal_contact_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'polypeptide_metal_contact';
> 
> --- ************************************************
> --- *** relation: protein_protein_contact ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residues involved in protein-protein int ***
> --- *** eractions.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW protein_protein_contact AS
>   SELECT
>     feature_id AS protein_protein_contact_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'protein_protein_contact';
> 
> --- ************************************************
> --- *** relation: polypeptide_calcium_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with calcium ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_calcium_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_calcium_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_calcium_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: polypeptide_cobalt_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with cobalt. ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_cobalt_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_cobalt_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_cobalt_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: polypeptide_copper_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with copper. ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_copper_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_copper_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_copper_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: polypeptide_iron_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with iron.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_iron_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_iron_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_iron_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: polypeptide_magnesium_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with magnesi ***
> --- *** um.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_magnesium_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_magnesium_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_magnesium_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: polypeptide_manganese_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with mangane ***
> --- *** se.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_manganese_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_manganese_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_manganese_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: polypeptide_molybdenum_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with molybde ***
> --- *** num.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_molybdenum_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_molybdenum_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_molybdenum_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: polypeptide_nickel_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with nickel. ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_nickel_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_nickel_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_nickel_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: polypeptide_tungsten_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with tungste ***
> --- *** n.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_tungsten_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_tungsten_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_tungsten_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: polypeptide_zinc_ion_contact_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residue involved in contact with zinc.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_zinc_ion_contact_site AS
>   SELECT
>     feature_id AS polypeptide_zinc_ion_contact_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_zinc_ion_contact_site';
> 
> --- ************************************************
> --- *** relation: catalytic_residue ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Amino acid involved in the activity of a ***
> --- *** n enzyme.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW catalytic_residue AS
>   SELECT
>     feature_id AS catalytic_residue_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'catalytic_residue';
> 
> --- ************************************************
> --- *** relation: polypeptide_ligand_contact ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residues which interact with a ligand.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_ligand_contact AS
>   SELECT
>     feature_id AS polypeptide_ligand_contact_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_ligand_contact';
> 
> --- ************************************************
> --- *** relation: asx_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of five consecutive residues and ***
> --- ***  two H-bonds in which: Residue(i) is Asp ***
> --- *** artate or Asparagine (Asx), side-chain O ***
> --- ***  of residue(i) is H-bonded to the main-c ***
> --- *** hain NH of residue(i+2) or (i+3), main-c ***
> --- *** hain CO of residue(i) is H-bonded to the ***
> --- ***  main-chain NH of residue(i+3) or (i+4). ***
> --- ************************************************
> ---
> 
> CREATE VIEW asx_motif AS
>   SELECT
>     feature_id AS asx_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asx_motif';
> 
> --- ************************************************
> --- *** relation: beta_bulge ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of three residues within a beta- ***
> --- *** sheet in which the main chains of two co ***
> --- *** nsecutive residues are H-bonded to that  ***
> --- *** of the third, and in which the dihedral  ***
> --- *** angles are as follows: Residue(i): -140  ***
> --- *** degrees < phi(l) -20 degrees , -90 degre ***
> --- *** es < psi(l) < 40 degrees. Residue (i+1): ***
> --- ***  -180 degrees < phi < -25 degrees or +12 ***
> --- *** 0 degrees < phi < +180 degrees, +40 degr ***
> --- *** ees < psi < +180 degrees or -180 degrees ***
> --- ***  < psi < -120 degrees.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_bulge AS
>   SELECT
>     feature_id AS beta_bulge_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_bulge';
> 
> --- ************************************************
> --- *** relation: beta_bulge_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of three residues within a beta- ***
> --- *** sheet consisting of two H-bonds. Beta bu ***
> --- *** lge loops often occur at the loop ends o ***
> --- *** f beta-hairpins.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_bulge_loop AS
>   SELECT
>     feature_id AS beta_bulge_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_bulge_loop_five' OR cvterm.name = 'beta_bulge_loop_six' OR cvterm.name = 'beta_bulge_loop';
> 
> --- ************************************************
> --- *** relation: beta_bulge_loop_five ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of three residues within a beta- ***
> --- *** sheet consisting of two H-bonds in which ***
> --- *** : the main-chain NH of residue(i) is H-b ***
> --- *** onded to the main-chain CO of residue(i+ ***
> --- *** 4), the main-chain CO of residue i is H- ***
> --- *** bonded to the main-chain NH of residue(i ***
> --- *** +3), these loops have an RL nest at resi ***
> --- *** dues i+2 and i+3.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_bulge_loop_five AS
>   SELECT
>     feature_id AS beta_bulge_loop_five_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_bulge_loop_five';
> 
> --- ************************************************
> --- *** relation: beta_bulge_loop_six ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of three residues within a beta- ***
> --- *** sheet consisting of two H-bonds in which ***
> --- *** : the main-chain NH of residue(i) is H-b ***
> --- *** onded to the main-chain CO of residue(i+ ***
> --- *** 5), the main-chain CO of residue i is H- ***
> --- *** bonded to the main-chain NH of residue(i ***
> --- *** +4), these loops have an RL nest at resi ***
> --- *** dues i+3 and i+4.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_bulge_loop_six AS
>   SELECT
>     feature_id AS beta_bulge_loop_six_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_bulge_loop_six';
> 
> --- ************************************************
> --- *** relation: beta_strand ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A beta strand describes a single length  ***
> --- *** of polypeptide chain that forms part of  ***
> --- *** a beta sheet. A single continuous stretc ***
> --- *** h of amino acids adopting an extended co ***
> --- *** nformation of hydrogen bonds between the ***
> --- ***  N-O and the C=O of another part of the  ***
> --- *** peptide. This forms a secondary protein  ***
> --- *** structure in which two or more extended  ***
> --- *** polypeptide regions are hydrogen-bonded  ***
> --- *** to one another in a planar array.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_strand AS
>   SELECT
>     feature_id AS beta_strand_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'antiparallel_beta_strand' OR cvterm.name = 'parallel_beta_strand' OR cvterm.name = 'beta_strand';
> 
> --- ************************************************
> --- *** relation: antiparallel_beta_strand ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A peptide region which hydrogen bonded t ***
> --- *** o another region of peptide running in t ***
> --- *** he oposite direction (one running N-term ***
> --- *** inal to C-terminal and one running C-ter ***
> --- *** minal to N-terminal). Hydrogen bonding o ***
> --- *** ccurs between every other C=O from one s ***
> --- *** trand to every other N-H on the adjacent ***
> --- ***  strand. In this case, if two atoms C-al ***
> --- *** pha (i) and C-alpha (j) are adjacent in  ***
> --- *** two hydrogen-bonded beta strands, then t ***
> --- *** hey form two mutual backbone hydrogen bo ***
> --- *** nds to each other's flanking peptide gro ***
> --- *** ups; this is known as a close pair of hy ***
> --- *** drogen bonds. The peptide backbone dihed ***
> --- *** ral angles (phi, psi) are about (-140 de ***
> --- *** grees, 135 degrees) in antiparallel shee ***
> --- *** ts.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW antiparallel_beta_strand AS
>   SELECT
>     feature_id AS antiparallel_beta_strand_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'antiparallel_beta_strand';
> 
> --- ************************************************
> --- *** relation: parallel_beta_strand ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A peptide region which hydrogen bonded t ***
> --- *** o another region of peptide running in t ***
> --- *** he oposite direction (both running N-ter ***
> --- *** minal to C-terminal). This orientation i ***
> --- *** s slightly less stable because it introd ***
> --- *** uces nonplanarity in the inter-strand hy ***
> --- *** drogen bonding pattern. Hydrogen bonding ***
> --- ***  occurs between every other C=O from one ***
> --- ***  strand to every other N-H on the adjace ***
> --- *** nt strand. In this case, if two atoms C- ***
> --- *** alpha (i)and C-alpha (j) are adjacent in ***
> --- ***  two hydrogen-bonded beta strands, then  ***
> --- *** they do not hydrogen bond to each other; ***
> --- ***  rather, one residue forms hydrogen bond ***
> --- *** s to the residues that flank the other ( ***
> --- *** but not vice versa). For example, residu ***
> --- *** e i may form hydrogen bonds to residues  ***
> --- *** j - 1 and j + 1; this is known as a wide ***
> --- ***  pair of hydrogen bonds. By contrast, re ***
> --- *** sidue j may hydrogen-bond to different r ***
> --- *** esidues altogether, or to none at all. T ***
> --- *** he dihedral angles (phi, psi) are about  ***
> --- *** (-120 degrees, 115 degrees) in parallel  ***
> --- *** sheets.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW parallel_beta_strand AS
>   SELECT
>     feature_id AS parallel_beta_strand_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'parallel_beta_strand';
> 
> --- ************************************************
> --- *** relation: peptide_helix ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A helix is a secondary_structure conform ***
> --- *** ation where the peptide backbone forms a ***
> --- ***  coil.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW peptide_helix AS
>   SELECT
>     feature_id AS peptide_helix_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'left_handed_peptide_helix' OR cvterm.name = 'right_handed_peptide_helix' OR cvterm.name = 'alpha_helix' OR cvterm.name = 'pi_helix' OR cvterm.name = 'three_ten_helix' OR cvterm.name = 'peptide_helix';
> 
> --- ************************************************
> --- *** relation: left_handed_peptide_helix ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A left handed helix is a region of pepti ***
> --- *** de where the coiled conformation turns i ***
> --- *** n an anticlockwise, left handed screw.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW left_handed_peptide_helix AS
>   SELECT
>     feature_id AS left_handed_peptide_helix_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'left_handed_peptide_helix';
> 
> --- ************************************************
> --- *** relation: right_handed_peptide_helix ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A right handed helix is a region of pept ***
> --- *** ide where the coiled conformation turns  ***
> --- *** in a clockwise, right handed screw.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW right_handed_peptide_helix AS
>   SELECT
>     feature_id AS right_handed_peptide_helix_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alpha_helix' OR cvterm.name = 'pi_helix' OR cvterm.name = 'three_ten_helix' OR cvterm.name = 'right_handed_peptide_helix';
> 
> --- ************************************************
> --- *** relation: alpha_helix ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The helix has 3.6 residues per turn whic ***
> --- *** h corersponds to a translation of 1.5 an ***
> --- *** gstroms (= 0.15 nm) along the helical ax ***
> --- *** is. Every backbone N-H group donates a h ***
> --- *** ydrogen bond to the backbone C=O group o ***
> --- *** f the amino acid four residues earlier.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW alpha_helix AS
>   SELECT
>     feature_id AS alpha_helix_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alpha_helix';
> 
> --- ************************************************
> --- *** relation: pi_helix ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The pi helix has 4.1 residues per turn a ***
> --- *** nd a translation of 1.15  (=0.115 nm) al ***
> --- *** ong the helical axis. The N-H group of a ***
> --- *** n amino acid forms a hydrogen bond with  ***
> --- *** the C=O group of the amino acid five res ***
> --- *** idues earlier.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW pi_helix AS
>   SELECT
>     feature_id AS pi_helix_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pi_helix';
> 
> --- ************************************************
> --- *** relation: three_ten_helix ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The 3-10 helix has 3 residues per turn w ***
> --- *** ith a translation of 2.0 angstroms (=0.2 ***
> --- ***  nm) along the helical axis. The N-H gro ***
> --- *** up of an amino acid forms a hydrogen bon ***
> --- *** d with the C=O group of the amino acid t ***
> --- *** hree residues earlier.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_ten_helix AS
>   SELECT
>     feature_id AS three_ten_helix_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_ten_helix';
> 
> --- ************************************************
> --- *** relation: polypeptide_nest_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of two consecutive residues with ***
> --- ***  dihedral angles. Nest should not have P ***
> --- *** roline as any residue. Nests frequently  ***
> --- *** occur as parts of other motifs such as S ***
> --- *** chellman loops.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_nest_motif AS
>   SELECT
>     feature_id AS polypeptide_nest_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_nest_left_right_motif' OR cvterm.name = 'polypeptide_nest_right_left_motif' OR cvterm.name = 'polypeptide_nest_motif';
> 
> --- ************************************************
> --- *** relation: polypeptide_nest_left_right_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of two consecutive residues with ***
> --- ***  dihedral angles: Residue(i): +20 degree ***
> --- *** s < phi < +140 degrees, -40 degrees < ps ***
> --- *** i < +90 degrees. Residue(i+1): -140 degr ***
> --- *** ees < phi < -20 degrees, -90 degrees < p ***
> --- *** si < +40 degrees.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_nest_left_right_motif AS
>   SELECT
>     feature_id AS polypeptide_nest_left_right_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_nest_left_right_motif';
> 
> --- ************************************************
> --- *** relation: polypeptide_nest_right_left_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of two consecutive residues with ***
> --- ***  dihedral angles: Residue(i): -140 degre ***
> --- *** es < phi < -20 degrees, -90 degrees < ps ***
> --- *** i < +40 degrees. Residue(i+1): +20 degre ***
> --- *** es < phi < +140 degrees, -40 degrees < p ***
> --- *** si < +90 degrees.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_nest_right_left_motif AS
>   SELECT
>     feature_id AS polypeptide_nest_right_left_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_nest_right_left_motif';
> 
> --- ************************************************
> --- *** relation: schellmann_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of six or seven consecutive resi ***
> --- *** dues that contains two H-bonds.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW schellmann_loop AS
>   SELECT
>     feature_id AS schellmann_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'schellmann_loop_seven' OR cvterm.name = 'schellmann_loop_six' OR cvterm.name = 'schellmann_loop';
> 
> --- ************************************************
> --- *** relation: schellmann_loop_seven ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Wild type: A motif of seven consecutive  ***
> --- *** residues that contains two H-bonds in wh ***
> --- *** ich: the main-chain CO of residue(i) is  ***
> --- *** H-bonded to the main-chain NH of residue ***
> --- *** (i+6), the main-chain CO of residue(i+1) ***
> --- ***  is H-bonded to the main-chain NH of res ***
> --- *** idue(i+5).                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW schellmann_loop_seven AS
>   SELECT
>     feature_id AS schellmann_loop_seven_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'schellmann_loop_seven';
> 
> --- ************************************************
> --- *** relation: schellmann_loop_six ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Common Type: A motif of six consecutive  ***
> --- *** residues that contains two H-bonds in wh ***
> --- *** ich: the main-chain CO of residue(i) is  ***
> --- *** H-bonded to the main-chain NH of residue ***
> --- *** (i+5) the main-chain CO of residue(i+1)  ***
> --- *** is H-bonded to the main-chain NH of resi ***
> --- *** due(i+4).                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW schellmann_loop_six AS
>   SELECT
>     feature_id AS schellmann_loop_six_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'schellmann_loop_six';
> 
> --- ************************************************
> --- *** relation: serine_threonine_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of five consecutive residues and ***
> --- ***  two hydrogen bonds in which: residue(i) ***
> --- ***  is Serine (S) or Threonine (T), the sid ***
> --- *** e-chain O of residue(i) is H-bonded to t ***
> --- *** he main-chain NH of residue(i+2) or (i+3 ***
> --- *** ) , the main-chain CO group of residue(i ***
> --- *** ) is H-bonded to the main-chain NH of re ***
> --- *** sidue(i+3) or (i+4).                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW serine_threonine_motif AS
>   SELECT
>     feature_id AS serine_threonine_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'serine_threonine_motif';
> 
> --- ************************************************
> --- *** relation: serine_threonine_staple_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of four or five consecutive resi ***
> --- *** dues and one H-bond in which: residue(i) ***
> --- ***  is Serine (S) or Threonine (T), the sid ***
> --- *** e-chain OH of residue(i) is H-bonded to  ***
> --- *** the main-chain CO of residue(i3) or (i4) ***
> --- *** , Phi angles of residues(i1), (i2) and ( ***
> --- *** i3) are negative.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW serine_threonine_staple_motif AS
>   SELECT
>     feature_id AS serine_threonine_staple_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'serine_threonine_staple_motif';
> 
> --- ************************************************
> --- *** relation: polypeptide_turn_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A reversal in the direction of the backb ***
> --- *** one of a protein that is stabilized by h ***
> --- *** ydrogen bond between backbone NH and CO  ***
> --- *** groups, involving no more than 4 amino a ***
> --- *** cid residues.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_turn_motif AS
>   SELECT
>     feature_id AS polypeptide_turn_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asx_turn' OR cvterm.name = 'beta_turn' OR cvterm.name = 'gamma_turn' OR cvterm.name = 'serine_threonine_turn' OR cvterm.name = 'asx_turn_left_handed_type_one' OR cvterm.name = 'asx_turn_left_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_two' OR cvterm.name = 'beta_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_right_handed_type_two' OR cvterm.name = 'beta_turn_type_six' OR cvterm.name = 'beta_turn_type_eight' OR cvterm.name = 'beta_turn_type_six_a' OR cvterm.name = 'beta_turn_type_six_b' OR cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'gamma_turn_classic' OR cvterm.name = 'gamma_turn_inverse' OR cvterm.name = 'st_turn_left_handed_type_one' OR cvterm.name = 'st_turn_left_handed_type_two' OR cvterm.name = 'st_turn_right_handed_type_one' OR cvterm.name = 'st_turn_right_handed_type_two' OR cvterm.name = 'polypeptide_turn_motif';
> 
> --- ************************************************
> --- *** relation: asx_turn_left_handed_type_one ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Left handed type I (dihedral angles):- R ***
> --- *** esidue(i): -140 degrees < chi (1) -120 d ***
> --- *** egrees < -20 degrees, -90 degrees < psi  ***
> --- *** +120 degrees < +40 degrees. Residue(i+1) ***
> --- *** : -140 degrees < phi < -20 degrees, -90  ***
> --- *** degrees < psi < +40 degrees.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW asx_turn_left_handed_type_one AS
>   SELECT
>     feature_id AS asx_turn_left_handed_type_one_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asx_turn_left_handed_type_one';
> 
> --- ************************************************
> --- *** relation: asx_turn_left_handed_type_two ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Left handed type II (dihedral angles):-  ***
> --- *** Residue(i): -140 degrees < chi (1) -120  ***
> --- *** degrees < -20 degrees, +80 degrees < psi ***
> --- ***  +120 degrees < +180 degrees. Residue(i+ ***
> --- *** 1): +20 degrees < phi < +140 degrees, -4 ***
> --- *** 0 degrees < psi < +90 degrees.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW asx_turn_left_handed_type_two AS
>   SELECT
>     feature_id AS asx_turn_left_handed_type_two_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asx_turn_left_handed_type_two';
> 
> --- ************************************************
> --- *** relation: asx_turn_right_handed_type_two ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Right handed type II (dihedral angles):- ***
> --- ***  Residue(i): -140 degrees < chi (1) -120 ***
> --- ***  degrees < -20 degrees, +80 degrees < ps ***
> --- *** i +120 degrees < +180 degrees. Residue(i ***
> --- *** +1): +20 degrees < phi < +140 degrees, - ***
> --- *** 40 degrees < psi < +90 degrees.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW asx_turn_right_handed_type_two AS
>   SELECT
>     feature_id AS asx_turn_right_handed_type_two_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asx_turn_right_handed_type_two';
> 
> --- ************************************************
> --- *** relation: asx_turn_right_handed_type_one ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Right handed type I (dihedral angles):-  ***
> --- *** Residue(i): -140 degrees < chi (1) -120  ***
> --- *** degrees < -20 degrees, -90 degrees < psi ***
> --- ***  +120 degrees < +40 degrees. Residue(i+1 ***
> --- *** ): -140 degrees < phi < -20 degrees, -90 ***
> --- ***  degrees < psi < +40 degrees.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW asx_turn_right_handed_type_one AS
>   SELECT
>     feature_id AS asx_turn_right_handed_type_one_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asx_turn_right_handed_type_one';
> 
> --- ************************************************
> --- *** relation: beta_turn ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of four consecutive residues tha ***
> --- *** t may contain one H-bond, which, if pres ***
> --- *** ent, is between the main-chain CO of the ***
> --- ***  first residue and the main-chain NH of  ***
> --- *** the fourth. It is characterized by the d ***
> --- *** ihedral angles of the second and third r ***
> --- *** esidues, which are the basis for sub-cat ***
> --- *** egorization.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn AS
>   SELECT
>     feature_id AS beta_turn_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_left_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_two' OR cvterm.name = 'beta_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_right_handed_type_two' OR cvterm.name = 'beta_turn_type_six' OR cvterm.name = 'beta_turn_type_eight' OR cvterm.name = 'beta_turn_type_six_a' OR cvterm.name = 'beta_turn_type_six_b' OR cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'beta_turn';
> 
> --- ************************************************
> --- *** relation: beta_turn_left_handed_type_one ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Left handed type I:A motif of four conse ***
> --- *** cutive residues that may contain one H-b ***
> --- *** ond, which, if present, is between the m ***
> --- *** ain-chain CO of the first residue and th ***
> --- *** e main-chain NH of the fourth. It is cha ***
> --- *** racterized by the dihedral angles:- Resi ***
> --- *** due(i+1): -140 degrees > phi > -20 degre ***
> --- *** es, -90 degrees > psi > +40 degrees. Res ***
> --- *** idue(i+2): -140 degrees > phi > -20 degr ***
> --- *** ees, -90 degrees > psi > +40 degrees.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_left_handed_type_one AS
>   SELECT
>     feature_id AS beta_turn_left_handed_type_one_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_left_handed_type_one';
> 
> --- ************************************************
> --- *** relation: beta_turn_left_handed_type_two ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Left handed type II: A motif of four con ***
> --- *** secutive residues that may contain one H ***
> --- *** -bond, which, if present, is between the ***
> --- ***  main-chain CO of the first residue and  ***
> --- *** the main-chain NH of the fourth. It is c ***
> --- *** haracterized by the dihedral angles: Res ***
> --- *** idue(i+1): -140 degrees > phi > -20 degr ***
> --- *** ees, +80 degrees > psi > +180 degrees. R ***
> --- *** esidue(i+2): +20 degrees > phi > +140 de ***
> --- *** grees, -40 degrees > psi > +90 degrees.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_left_handed_type_two AS
>   SELECT
>     feature_id AS beta_turn_left_handed_type_two_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_left_handed_type_two';
> 
> --- ************************************************
> --- *** relation: beta_turn_right_handed_type_one ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Right handed type I:A motif of four cons ***
> --- *** ecutive residues that may contain one H- ***
> --- *** bond, which, if present, is between the  ***
> --- *** main-chain CO of the first residue and t ***
> --- *** he main-chain NH of the fourth. It is ch ***
> --- *** aracterized by the dihedral angles: Resi ***
> --- *** due(i+1): -140 degrees < phi < -20 degre ***
> --- *** es, -90 degrees < psi < +40 degrees. Res ***
> --- *** idue(i+2): -140 degrees < phi < -20 degr ***
> --- *** ees, -90 degrees < psi < +40 degrees.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_right_handed_type_one AS
>   SELECT
>     feature_id AS beta_turn_right_handed_type_one_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_right_handed_type_one';
> 
> --- ************************************************
> --- *** relation: beta_turn_right_handed_type_two ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Right handed type II:A motif of four con ***
> --- *** secutive residues that may contain one H ***
> --- *** -bond, which, if present, is between the ***
> --- ***  main-chain CO of the first residue and  ***
> --- *** the main-chain NH of the fourth. It is c ***
> --- *** haracterized by the dihedral angles: Res ***
> --- *** idue(i+1): -140 degrees < phi < -20 degr ***
> --- *** ees, +80 degrees < psi < +180 degrees. R ***
> --- *** esidue(i+2): +20 degrees < phi < +140 de ***
> --- *** grees, -40 degrees < psi < +90 degrees.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_right_handed_type_two AS
>   SELECT
>     feature_id AS beta_turn_right_handed_type_two_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_right_handed_type_two';
> 
> --- ************************************************
> --- *** relation: gamma_turn ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Gamma turns, defined for 3 residues i, i ***
> --- *** +1, i+2 if a hydrogen bond exists betwee ***
> --- *** n residues i and i+2 and the phi and psi ***
> --- ***  angles of residue i+1 fall within 40 de ***
> --- *** grees.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW gamma_turn AS
>   SELECT
>     feature_id AS gamma_turn_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gamma_turn_classic' OR cvterm.name = 'gamma_turn_inverse' OR cvterm.name = 'gamma_turn';
> 
> --- ************************************************
> --- *** relation: gamma_turn_classic ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Gamma turns, defined for 3 residues i, i ***
> --- *** +1, i+2 if a hydrogen bond exists betwee ***
> --- *** n residues i and i+2 and the phi and psi ***
> --- ***  angles of residue i+1 fall within 40 de ***
> --- *** grees: phi(i+1)=75.0 - psi(i+1)=-64.0.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW gamma_turn_classic AS
>   SELECT
>     feature_id AS gamma_turn_classic_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gamma_turn_classic';
> 
> --- ************************************************
> --- *** relation: gamma_turn_inverse ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Gamma turns, defined for 3 residues i, i ***
> --- *** +1, i+2 if a hydrogen bond exists betwee ***
> --- *** n residues i and i+2 and the phi and psi ***
> --- ***  angles of residue i+1 fall within 40 de ***
> --- *** grees: phi(i+1)=-79.0 - psi(i+1)=69.0.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW gamma_turn_inverse AS
>   SELECT
>     feature_id AS gamma_turn_inverse_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gamma_turn_inverse';
> 
> --- ************************************************
> --- *** relation: serine_threonine_turn ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of three consecutive residues an ***
> --- *** d one H-bond in which: residue(i) is Ser ***
> --- *** ine (S) or Threonine (T), the side-chain ***
> --- ***  O of residue(i) is H-bonded to the main ***
> --- *** -chain NH of residue(i+2).               ***
> --- ************************************************
> ---
> 
> CREATE VIEW serine_threonine_turn AS
>   SELECT
>     feature_id AS serine_threonine_turn_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'st_turn_left_handed_type_one' OR cvterm.name = 'st_turn_left_handed_type_two' OR cvterm.name = 'st_turn_right_handed_type_one' OR cvterm.name = 'st_turn_right_handed_type_two' OR cvterm.name = 'serine_threonine_turn';
> 
> --- ************************************************
> --- *** relation: st_turn_left_handed_type_one ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The peptide twists in an anticlockwise,  ***
> --- *** left handed manner. The dihedral angles  ***
> --- *** for this turn are: Residue(i): -140 degr ***
> --- *** ees < chi(1) -120 degrees < -20 degrees, ***
> --- ***  -90 degrees psi +120 degrees < +40 degr ***
> --- *** ees, residue(i+1): -140 degrees < phi <  ***
> --- *** -20 degrees, -90 < psi < +40 degrees.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW st_turn_left_handed_type_one AS
>   SELECT
>     feature_id AS st_turn_left_handed_type_one_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'st_turn_left_handed_type_one';
> 
> --- ************************************************
> --- *** relation: st_turn_left_handed_type_two ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The peptide twists in an anticlockwise,  ***
> --- *** left handed manner. The dihedral angles  ***
> --- *** for this turn are: Residue(i): -140 degr ***
> --- *** ees < chi(1) -120 degrees < -20 degrees, ***
> --- ***  +80 degrees psi +120 degrees < +180 deg ***
> --- *** rees, residue(i+1): +20 degrees < phi <  ***
> --- *** +140 degrees, -40 < psi < +90 degrees.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW st_turn_left_handed_type_two AS
>   SELECT
>     feature_id AS st_turn_left_handed_type_two_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'st_turn_left_handed_type_two';
> 
> --- ************************************************
> --- *** relation: st_turn_right_handed_type_one ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The peptide twists in an clockwise, righ ***
> --- *** t handed manner. The dihedral angles for ***
> --- ***  this turn are: Residue(i): -140 degrees ***
> --- ***  < chi(1) -120 degrees < -20 degrees, -9 ***
> --- *** 0 degrees psi +120 degrees < +40 degrees ***
> --- *** , residue(i+1): -140 degrees < phi < -20 ***
> --- ***  degrees, -90 < psi < +40 degrees.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW st_turn_right_handed_type_one AS
>   SELECT
>     feature_id AS st_turn_right_handed_type_one_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'st_turn_right_handed_type_one';
> 
> --- ************************************************
> --- *** relation: st_turn_right_handed_type_two ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The peptide twists in an clockwise, righ ***
> --- *** t handed manner. The dihedral angles for ***
> --- ***  this turn are: Residue(i): -140 degrees ***
> --- ***  < chi(1) -120 degrees < -20 degrees, +8 ***
> --- *** 0 degrees psi +120 degrees < +180 degree ***
> --- *** s, residue(i+1): +20 degrees < phi < +14 ***
> --- *** 0 degrees, -40 < psi < +90 degrees.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW st_turn_right_handed_type_two AS
>   SELECT
>     feature_id AS st_turn_right_handed_type_two_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'st_turn_right_handed_type_two';
> 
> --- ************************************************
> --- *** relation: polypeptide_variation_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A site of sequence variation (alteration ***
> --- *** ). Alternative sequence due to naturally ***
> --- ***  occuring events such as polymorphisms a ***
> --- *** nd altermatve splicing or experimental m ***
> --- *** ethods such as site directed mutagenesis ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_variation_site AS
>   SELECT
>     feature_id AS polypeptide_variation_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'natural_variant_site' OR cvterm.name = 'mutated_variant_site' OR cvterm.name = 'alternate_sequence_site' OR cvterm.name = 'polypeptide_variation_site';
> 
> --- ************************************************
> --- *** relation: natural_variant_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Describes the natural sequence variants  ***
> --- *** due to polymorphisms, disease-associated ***
> --- ***  mutations, RNA editing and variations b ***
> --- *** etween strains, isolates or cultivars.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW natural_variant_site AS
>   SELECT
>     feature_id AS natural_variant_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'natural_variant_site';
> 
> --- ************************************************
> --- *** relation: mutated_variant_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Site which has been experimentally alter ***
> --- *** ed.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW mutated_variant_site AS
>   SELECT
>     feature_id AS mutated_variant_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mutated_variant_site';
> 
> --- ************************************************
> --- *** relation: alternate_sequence_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Description of sequence variants produce ***
> --- *** d by alternative splicing, alternative p ***
> --- *** romoter usage, alternative initiation an ***
> --- *** d ribosomal frameshifting.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW alternate_sequence_site AS
>   SELECT
>     feature_id AS alternate_sequence_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alternate_sequence_site';
> 
> --- ************************************************
> --- *** relation: beta_turn_type_six ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of four consecutive peptide resi ***
> --- *** des of type VIa or type VIb and where th ***
> --- *** e i+2 residue is cis-proline.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_type_six AS
>   SELECT
>     feature_id AS beta_turn_type_six_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_type_six_a' OR cvterm.name = 'beta_turn_type_six_b' OR cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'beta_turn_type_six';
> 
> --- ************************************************
> --- *** relation: beta_turn_type_six_a ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of four consecutive peptide resi ***
> --- *** dues, of which the i+2 residue is prolin ***
> --- *** e, and that may contain one H-bond, whic ***
> --- *** h, if present, is between the main-chain ***
> --- ***  CO of the first residue and the main-ch ***
> --- *** ain NH of the fourth and is characterize ***
> --- *** d by the dihedral angles: Residue(i+1):  ***
> --- *** phi ~ -60 degrees, psi ~ 120 degrees. Re ***
> --- *** sidue(i+2): phi ~ -90 degrees, psi ~ 0 d ***
> --- *** egrees.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_type_six_a AS
>   SELECT
>     feature_id AS beta_turn_type_six_a_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'beta_turn_type_six_a';
> 
> --- ************************************************
> --- *** relation: beta_turn_type_six_a_one ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_type_six_a_one AS
>   SELECT
>     feature_id AS beta_turn_type_six_a_one_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_type_six_a_one';
> 
> --- ************************************************
> --- *** relation: beta_turn_type_six_a_two ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_type_six_a_two AS
>   SELECT
>     feature_id AS beta_turn_type_six_a_two_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_type_six_a_two';
> 
> --- ************************************************
> --- *** relation: beta_turn_type_six_b ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of four consecutive peptide resi ***
> --- *** dues, of which the i+2 residue is prolin ***
> --- *** e, and that may contain one H-bond, whic ***
> --- *** h, if present, is between the main-chain ***
> --- ***  CO of the first residue and the main-ch ***
> --- *** ain NH of the fourth and is characterize ***
> --- *** d by the dihedral angles: Residue(i+1):  ***
> --- *** phi ~ -120 degrees, psi ~ 120 degrees. R ***
> --- *** esidue(i+2): phi ~ -60 degrees, psi ~ 0  ***
> --- *** degrees.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_type_six_b AS
>   SELECT
>     feature_id AS beta_turn_type_six_b_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_type_six_b';
> 
> --- ************************************************
> --- *** relation: beta_turn_type_eight ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of four consecutive peptide resi ***
> --- *** dues that may contain one H-bond, which, ***
> --- ***  if present, is between the main-chain C ***
> --- *** O of the first residue and the main-chai ***
> --- *** n NH of the fourth and is characterized  ***
> --- *** by the dihedral angles: Residue(i+1): ph ***
> --- *** i ~ -60 degrees, psi ~ -30 degrees. Resi ***
> --- *** due(i+2): phi ~ -120 degrees, psi ~ 120  ***
> --- *** degrees.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW beta_turn_type_eight AS
>   SELECT
>     feature_id AS beta_turn_type_eight_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'beta_turn_type_eight';
> 
> --- ************************************************
> --- *** relation: dre_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters, usually l ***
> --- *** ocated between -10 and -60 relative to t ***
> --- *** he TSS. Consensus sequence is WATCGATW.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW dre_motif AS
>   SELECT
>     feature_id AS dre_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DRE_motif';
> 
> --- ************************************************
> --- *** relation: dmv4_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters, located i ***
> --- *** mmediately upstream of some TATA box ele ***
> --- *** ments with respect to the TSS (+1). Cons ***
> --- *** ensus sequence is YGGTCACACTR. Marked sp ***
> --- *** atial preference within core promoter; t ***
> --- *** end to occur near the TSS, although not  ***
> --- *** as tightly as INR (SO:0000014).          ***
> --- ************************************************
> ---
> 
> CREATE VIEW dmv4_motif AS
>   SELECT
>     feature_id AS dmv4_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DMv4_motif';
> 
> --- ************************************************
> --- *** relation: e_box_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters, usually l ***
> --- *** ocated between -60 and +1 relative to th ***
> --- *** e TSS. Consensus sequence is AWCAGCTGWT. ***
> --- ***  Tends to co-occur with DMv2 (SO:0001161 ***
> --- *** ). Tends to not occur with DPE motif (SO ***
> --- *** :0000015).                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW e_box_motif AS
>   SELECT
>     feature_id AS e_box_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'E_box_motif';
> 
> --- ************************************************
> --- *** relation: dmv5_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters, usually l ***
> --- *** ocated between -50 and -10 relative to t ***
> --- *** he TSS. Consensus sequence is KTYRGTATWT ***
> --- *** TT. Tends to co-occur with DMv4 (SO:0001 ***
> --- *** 157) . Tends to not occur with DPE motif ***
> --- ***  (SO:0000015) or MTE (SO:0001162).       ***
> --- ************************************************
> ---
> 
> CREATE VIEW dmv5_motif AS
>   SELECT
>     feature_id AS dmv5_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DMv5_motif';
> 
> --- ************************************************
> --- *** relation: dmv3_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters, usually l ***
> --- *** ocated between -30 and +15 relative to t ***
> --- *** he TSS. Consensus sequence is KNNCAKCNCT ***
> --- *** RNY. Tends to co-occur with DMv2 (SO:000 ***
> --- *** 1161). Tends to not occur with DPE motif ***
> --- ***  (SO:0000015) or MTE (0001162).          ***
> --- ************************************************
> ---
> 
> CREATE VIEW dmv3_motif AS
>   SELECT
>     feature_id AS dmv3_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DMv3_motif';
> 
> --- ************************************************
> --- *** relation: dmv2_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters, usually l ***
> --- *** ocated between -60 and -45 relative to t ***
> --- *** he TSS. Consensus sequence is MKSYGGCARC ***
> --- *** GSYSS. Tends to co-occur with DMv3 (SO:0 ***
> --- *** 001160). Tends to not occur with DPE mot ***
> --- *** if (SO:0000015) or MTE (SO:0001162).     ***
> --- ************************************************
> ---
> 
> CREATE VIEW dmv2_motif AS
>   SELECT
>     feature_id AS dmv2_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DMv2_motif';
> 
> --- ************************************************
> --- *** relation: mte ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters, usually l ***
> --- *** ocated between +20 and +30 relative to t ***
> --- *** he TSS. Consensus sequence is CSARCSSAAC ***
> --- *** GS. Tends to co-occur with INR motif (SO ***
> --- *** :0000014). Tends to not occur with DPE m ***
> --- *** otif (SO:0000015) or DMv5 (SO:0001159).  ***
> --- ************************************************
> ---
> 
> CREATE VIEW mte AS
>   SELECT
>     feature_id AS mte_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'MTE';
> 
> --- ************************************************
> --- *** relation: inr1_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A promoter motif with consensus sequence ***
> --- ***  TCATTCG.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW inr1_motif AS
>   SELECT
>     feature_id AS inr1_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'INR1_motif';
> 
> --- ************************************************
> --- *** relation: dpe1_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A promoter motif with consensus sequence ***
> --- ***  CGGACGT.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW dpe1_motif AS
>   SELECT
>     feature_id AS dpe1_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DPE1_motif';
> 
> --- ************************************************
> --- *** relation: dmv1_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A promoter motif with consensus sequence ***
> --- ***  CARCCCT.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW dmv1_motif AS
>   SELECT
>     feature_id AS dmv1_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DMv1_motif';
> 
> --- ************************************************
> --- *** relation: gaga_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non directional promoter motif with co ***
> --- *** nsensus sequence GAGAGCG.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW gaga_motif AS
>   SELECT
>     feature_id AS gaga_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'GAGA_motif';
> 
> --- ************************************************
> --- *** relation: ndm2_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non directional promoter motif with co ***
> --- *** nsensus CGMYGYCR.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW ndm2_motif AS
>   SELECT
>     feature_id AS ndm2_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'NDM2_motif';
> 
> --- ************************************************
> --- *** relation: ndm3_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non directional promoter motif with co ***
> --- *** nsensus sequence GAAAGCT.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW ndm3_motif AS
>   SELECT
>     feature_id AS ndm3_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'NDM3_motif';
> 
> --- ************************************************
> --- *** relation: ds_rna_viral_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A ds_RNA_viral_sequence is a viral_seque ***
> --- *** nce that is the sequence of a virus that ***
> --- ***  exists as double stranded RNA.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW ds_rna_viral_sequence AS
>   SELECT
>     feature_id AS ds_rna_viral_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ds_RNA_viral_sequence';
> 
> --- ************************************************
> --- *** relation: polinton ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A kind of DNA transposon that populates  ***
> --- *** the genomes of protists, fungi, and anim ***
> --- *** als, characterized by a unique set of pr ***
> --- *** oteins necessary for their transposition ***
> --- *** , including a protein-primed DNA polymer ***
> --- *** ase B, retroviral integrase, cysteine pr ***
> --- *** otease, and ATPase. Polintons are charac ***
> --- *** terized by 6-bp target site duplications ***
> --- *** , terminal-inverted repeats that are sev ***
> --- *** eral hundred nucleotides long, and 5'-AG ***
> --- ***  and TC-3' termini. Polintons exist as a ***
> --- *** utonomous and nonautonomous elements.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW polinton AS
>   SELECT
>     feature_id AS polinton_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polinton';
> 
> --- ************************************************
> --- *** relation: rrna_21s ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A component of the large ribosomal subun ***
> --- *** it in mitochondrial rRNA.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_21s AS
>   SELECT
>     feature_id AS rrna_21s_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_21S';
> 
> --- ************************************************
> --- *** relation: trna_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a tRNA.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW trna_region AS
>   SELECT
>     feature_id AS trna_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'anticodon_loop' OR cvterm.name = 'anticodon' OR cvterm.name = 'CCA_tail' OR cvterm.name = 'DHU_loop' OR cvterm.name = 'T_loop' OR cvterm.name = 'tRNA_region';
> 
> --- ************************************************
> --- *** relation: anticodon_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence of seven nucleotide bases in  ***
> --- *** tRNA which contains the anticodon. It ha ***
> --- *** s the sequence 5'-pyrimidine-purine-anti ***
> --- *** codon-modified purine-any base-3.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW anticodon_loop AS
>   SELECT
>     feature_id AS anticodon_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'anticodon_loop';
> 
> --- ************************************************
> --- *** relation: anticodon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence of three nucleotide bases in  ***
> --- *** tRNA which recognizes a codon in mRNA.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW anticodon AS
>   SELECT
>     feature_id AS anticodon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'anticodon';
> 
> --- ************************************************
> --- *** relation: cca_tail ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Base sequence at the 3' end of a tRNA. T ***
> --- *** he 3'-hydroxyl group on the terminal ade ***
> --- *** nosine is the attachment point for the a ***
> --- *** mino acid.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW cca_tail AS
>   SELECT
>     feature_id AS cca_tail_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CCA_tail';
> 
> --- ************************************************
> --- *** relation: dhu_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Non-base-paired sequence of nucleotide b ***
> --- *** ases in tRNA. It contains several dihydr ***
> --- *** ouracil residues.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW dhu_loop AS
>   SELECT
>     feature_id AS dhu_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DHU_loop';
> 
> --- ************************************************
> --- *** relation: t_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Non-base-paired sequence of three nucleo ***
> --- *** tide bases in tRNA. It has sequence T-Ps ***
> --- *** i-C.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW t_loop AS
>   SELECT
>     feature_id AS t_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'T_loop';
> 
> --- ************************************************
> --- *** relation: pyrrolysine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding pyrrolysyl ***
> --- ***  tRNA (SO:0000766).                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW pyrrolysine_trna_primary_transcript AS
>   SELECT
>     feature_id AS pyrrolysine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pyrrolysine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: u3_snorna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** U3 snoRNA is a member of the box C/D cla ***
> --- *** ss of small nucleolar RNAs. The U3 snoRN ***
> --- *** A secondary structure is characterised b ***
> --- *** y a small 5' domain (with boxes A and A' ***
> --- *** ), and a larger 3' domain (with boxes B, ***
> --- ***  C, C', and D), the two domains being li ***
> --- *** nked by a single-stranded hinge. Boxes B ***
> --- ***  and C form the B/C motif, which appears ***
> --- ***  to be exclusive to U3 snoRNAs, and boxe ***
> --- *** s C' and D form the C'/D motif. The latt ***
> --- *** er is functionally similar to the C/D mo ***
> --- *** tifs found in other snoRNAs. The 5' doma ***
> --- *** in and the hinge region act as a pre-rRN ***
> --- *** A-binding domain. The 3' domain has cons ***
> --- *** erved protein-binding sites. Both the bo ***
> --- *** x B/C and box C'/D motifs are sufficient ***
> --- ***  for nuclear retention of U3 snoRNA. The ***
> --- ***  box C'/D motif is also necessary for nu ***
> --- *** cleolar localization, stability and hype ***
> --- *** rmethylation of U3 snoRNA. Both box B/C  ***
> --- *** and C'/D motifs are involved in specific ***
> --- ***  protein interactions and are necessary  ***
> --- *** for the rRNA processing functions of U3  ***
> --- *** snoRNA.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW u3_snorna AS
>   SELECT
>     feature_id AS u3_snorna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U3_snoRNA';
> 
> --- ************************************************
> --- *** relation: au_rich_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cis-acting element found in the 3' UTR ***
> --- ***  of some mRNA which is rich in AUUUA pen ***
> --- *** tamers. Messenger RNAs bearing multiple  ***
> --- *** AU-rich elements are often unstable.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW au_rich_element AS
>   SELECT
>     feature_id AS au_rich_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'AU_rich_element';
> 
> --- ************************************************
> --- *** relation: bruno_response_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cis-acting element found in the 3' UTR ***
> --- ***  of some mRNA which is bound by the Dros ***
> --- *** ophila Bruno protein and its homologs.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW bruno_response_element AS
>   SELECT
>     feature_id AS bruno_response_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'Bruno_response_element';
> 
> --- ************************************************
> --- *** relation: iron_responsive_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A regulatory sequence found in the 5' an ***
> --- *** d 3' UTRs of many mRNAs which encode iro ***
> --- *** n-binding proteins. It has a hairpin str ***
> --- *** ucture and is recognized by trans-acting ***
> --- ***  proteins known as iron-regulatory prote ***
> --- *** ins.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW iron_responsive_element AS
>   SELECT
>     feature_id AS iron_responsive_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'iron_responsive_element';
> 
> --- ************************************************
> --- *** relation: morpholino ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence compo ***
> --- *** sed of nucleobases bound to a morpholino ***
> --- ***  backbone. A morpholino backbone consist ***
> --- *** s of morpholine (CHEBI:34856) rings conn ***
> --- *** ected by phosphorodiamidate linkages.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW morpholino AS
>   SELECT
>     feature_id AS morpholino_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'morpholino';
> 
> --- ************************************************
> --- *** relation: pna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence compo ***
> --- *** sed of peptide nucleic acid (CHEBI:48021 ***
> --- *** ), a chemical consisting of nucleobases  ***
> --- *** bound to a backbone composed of repeatin ***
> --- *** g N-(2-aminoethyl)-glycine units linked  ***
> --- *** by peptide bonds. The purine and pyrimid ***
> --- *** ine bases are linked to the backbone by  ***
> --- *** methylene carbonyl bonds.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW pna AS
>   SELECT
>     feature_id AS pna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'PNA';
> 
> --- ************************************************
> --- *** relation: enzymatic ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing the sequence of  ***
> --- *** a transcript that has catalytic activity ***
> --- ***  with or without an associated ribonucle ***
> --- *** oprotein.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW enzymatic AS
>   SELECT
>     feature_id AS enzymatic_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ribozymic' OR cvterm.name = 'enzymatic';
> 
> --- ************************************************
> --- *** relation: ribozymic ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing the sequence of  ***
> --- *** a transcript that has catalytic activity ***
> --- ***  even without an associated ribonucleopr ***
> --- *** otein.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW ribozymic AS
>   SELECT
>     feature_id AS ribozymic_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ribozymic';
> 
> --- ************************************************
> --- *** relation: pseudouridylation_guide_snorna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A snoRNA that specifies the site of pseu ***
> --- *** douridylation in an RNA molecule by base ***
> --- ***  pairing with a short sequence around th ***
> --- *** e target residue.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudouridylation_guide_snorna AS
>   SELECT
>     feature_id AS pseudouridylation_guide_snorna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pseudouridylation_guide_snoRNA';
> 
> --- ************************************************
> --- *** relation: lna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence consi ***
> --- *** sting of nucleobases attached to a repea ***
> --- *** ting unit made of 'locked' deoxyribose r ***
> --- *** ings connected to a phosphate backbone.  ***
> --- *** The deoxyribose unit's conformation is ' ***
> --- *** locked' by a 2'-C,4'-C-oxymethylene link ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW lna AS
>   SELECT
>     feature_id AS lna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'LNA';
> 
> --- ************************************************
> --- *** relation: lna_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An oligo composed of LNA residues.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW lna_oligo AS
>   SELECT
>     feature_id AS lna_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'LNA_oligo';
> 
> --- ************************************************
> --- *** relation: tna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence consi ***
> --- *** sting of nucleobases attached to a repea ***
> --- *** ting unit made of threose rings connecte ***
> --- *** d to a phosphate backbone.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW tna AS
>   SELECT
>     feature_id AS tna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'TNA';
> 
> --- ************************************************
> --- *** relation: tna_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An oligo composed of TNA residues.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW tna_oligo AS
>   SELECT
>     feature_id AS tna_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'TNA_oligo';
> 
> --- ************************************************
> --- *** relation: gna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a sequence consi ***
> --- *** sting of nucleobases attached to a repea ***
> --- *** ting unit made of an acyclic three-carbo ***
> --- *** n propylene glycol connected to a phosph ***
> --- *** ate backbone. It has two enantiomeric fo ***
> --- *** rms, (R)-GNA and (S)-GNA.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW gna AS
>   SELECT
>     feature_id AS gna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'R_GNA' OR cvterm.name = 'S_GNA' OR cvterm.name = 'GNA';
> 
> --- ************************************************
> --- *** relation: gna_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An oligo composed of GNA residues.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW gna_oligo AS
>   SELECT
>     feature_id AS gna_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'R_GNA_oligo' OR cvterm.name = 'S_GNA_oligo' OR cvterm.name = 'GNA_oligo';
> 
> --- ************************************************
> --- *** relation: r_gna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a GNA sequence i ***
> --- *** n the (R)-GNA enantiomer.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW r_gna AS
>   SELECT
>     feature_id AS r_gna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'R_GNA';
> 
> --- ************************************************
> --- *** relation: r_gna_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An oligo composed of (R)-GNA residues.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW r_gna_oligo AS
>   SELECT
>     feature_id AS r_gna_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'R_GNA_oligo';
> 
> --- ************************************************
> --- *** relation: s_gna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a GNA sequence i ***
> --- *** n the (S)-GNA enantiomer.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW s_gna AS
>   SELECT
>     feature_id AS s_gna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'S_GNA';
> 
> --- ************************************************
> --- *** relation: s_gna_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An oligo composed of (S)-GNA residues.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW s_gna_oligo AS
>   SELECT
>     feature_id AS s_gna_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'S_GNA_oligo';
> 
> --- ************************************************
> --- *** relation: ds_dna_viral_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A ds_DNA_viral_sequence is a viral_seque ***
> --- *** nce that is the sequence of a virus that ***
> --- ***  exists as double stranded DNA.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW ds_dna_viral_sequence AS
>   SELECT
>     feature_id AS ds_dna_viral_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ds_DNA_viral_sequence';
> 
> --- ************************************************
> --- *** relation: ss_rna_viral_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A ss_RNA_viral_sequence is a viral_seque ***
> --- *** nce that is the sequence of a virus that ***
> --- ***  exists as single stranded RNA.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW ss_rna_viral_sequence AS
>   SELECT
>     feature_id AS ss_rna_viral_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence';
> 
> --- ************************************************
> --- *** relation: negative_sense_ssrna_viral_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A negative_sense_RNA_viral_sequence is a ***
> --- ***  ss_RNA_viral_sequence that is the seque ***
> --- *** nce of a single stranded RNA virus that  ***
> --- *** is complementary to mRNA and must be con ***
> --- *** verted to positive sense RNA by RNA poly ***
> --- *** merase before translation.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW negative_sense_ssrna_viral_sequence AS
>   SELECT
>     feature_id AS negative_sense_ssrna_viral_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'negative_sense_ssRNA_viral_sequence';
> 
> --- ************************************************
> --- *** relation: positive_sense_ssrna_viral_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A positive_sense_RNA_viral_sequence is a ***
> --- ***  ss_RNA_viral_sequence that is the seque ***
> --- *** nce of a single stranded RNA virus that  ***
> --- *** can be immediately translated by the hos ***
> --- *** t.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW positive_sense_ssrna_viral_sequence AS
>   SELECT
>     feature_id AS positive_sense_ssrna_viral_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'positive_sense_ssRNA_viral_sequence';
> 
> --- ************************************************
> --- *** relation: ambisense_ssrna_viral_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A ambisense_RNA_virus is a ss_RNA_viral_ ***
> --- *** sequence that is the sequence of a singl ***
> --- *** e stranded RNA virus with both messenger ***
> --- ***  and anti messenger polarity.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW ambisense_ssrna_viral_sequence AS
>   SELECT
>     feature_id AS ambisense_ssrna_viral_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ambisense_ssRNA_viral_sequence';
> 
> --- ************************************************
> --- *** relation: rna_polymerase_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region (DNA) to which RNA polymerase b ***
> --- *** inds, to begin transcription.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW rna_polymerase_promoter AS
>   SELECT
>     feature_id AS rna_polymerase_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RNApol_I_promoter' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'Phage_RNA_Polymerase_Promoter' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'SP6_RNA_Polymerase_Promoter' OR cvterm.name = 'T3_RNA_Polymerase_Promoter' OR cvterm.name = 'T7_RNA_Polymerase_Promoter' OR cvterm.name = 'RNA_polymerase_promoter';
> 
> --- ************************************************
> --- *** relation: phage_rna_polymerase_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region (DNA) to which Bacteriophage RN ***
> --- *** A polymerase binds, to begin transcripti ***
> --- *** on.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW phage_rna_polymerase_promoter AS
>   SELECT
>     feature_id AS phage_rna_polymerase_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SP6_RNA_Polymerase_Promoter' OR cvterm.name = 'T3_RNA_Polymerase_Promoter' OR cvterm.name = 'T7_RNA_Polymerase_Promoter' OR cvterm.name = 'Phage_RNA_Polymerase_Promoter';
> 
> --- ************************************************
> --- *** relation: sp6_rna_polymerase_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region (DNA) to which the SP6 RNA poly ***
> --- *** merase binds, to begin transcription.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW sp6_rna_polymerase_promoter AS
>   SELECT
>     feature_id AS sp6_rna_polymerase_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SP6_RNA_Polymerase_Promoter';
> 
> --- ************************************************
> --- *** relation: t3_rna_polymerase_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA sequence to which the T3 RNA polym ***
> --- *** erase binds, to begin transcription.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW t3_rna_polymerase_promoter AS
>   SELECT
>     feature_id AS t3_rna_polymerase_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'T3_RNA_Polymerase_Promoter';
> 
> --- ************************************************
> --- *** relation: t7_rna_polymerase_promoter ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region (DNA) to which the T7 RNA polym ***
> --- *** erase binds, to begin transcription.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW t7_rna_polymerase_promoter AS
>   SELECT
>     feature_id AS t7_rna_polymerase_promoter_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'T7_RNA_Polymerase_Promoter';
> 
> --- ************************************************
> --- *** relation: five_prime_est ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An EST read from the 5' end of a transcr ***
> --- *** ipt that usually codes for a protein. Th ***
> --- *** ese regions tend to be conserved across  ***
> --- *** species and do not change much within a  ***
> --- *** gene family.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_est AS
>   SELECT
>     feature_id AS five_prime_est_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_EST';
> 
> --- ************************************************
> --- *** relation: three_prime_est ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An EST read from the 3' end of a transcr ***
> --- *** ipt. They are more likely to fall within ***
> --- ***  non-coding, or untranslated regions(UTR ***
> --- *** s).                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_est AS
>   SELECT
>     feature_id AS three_prime_est_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_EST';
> 
> --- ************************************************
> --- *** relation: translational_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of mRNA (not divisible by 3 b ***
> --- *** ases) that is skipped during the process ***
> --- ***  of translational frameshifting (GO:0006 ***
> --- *** 452), causing the reading frame to be di ***
> --- *** fferent.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW translational_frameshift AS
>   SELECT
>     feature_id AS translational_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plus_1_translational_frameshift' OR cvterm.name = 'plus_2_translational_frameshift' OR cvterm.name = 'translational_frameshift';
> 
> --- ************************************************
> --- *** relation: plus_1_translational_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of mRNA 1 base long that is s ***
> --- *** kipped during the process of translation ***
> --- *** al frameshifting (GO:0006452), causing t ***
> --- *** he reading frame to be different.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW plus_1_translational_frameshift AS
>   SELECT
>     feature_id AS plus_1_translational_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plus_1_translational_frameshift';
> 
> --- ************************************************
> --- *** relation: plus_2_translational_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of mRNA 2 bases long that is  ***
> --- *** skipped during the process of translatio ***
> --- *** nal frameshifting (GO:0006452), causing  ***
> --- *** the reading frame to be different.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW plus_2_translational_frameshift AS
>   SELECT
>     feature_id AS plus_2_translational_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plus_2_translational_frameshift';
> 
> --- ************************************************
> --- *** relation: group_iii_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Group III introns are introns found in t ***
> --- *** he mRNA of the plastids of euglenoid pro ***
> --- *** tists. They are spliced by a two step tr ***
> --- *** ansesterification with bulged adenosine  ***
> --- *** as initiating nucleophile.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW group_iii_intron AS
>   SELECT
>     feature_id AS group_iii_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'group_III_intron';
> 
> --- ************************************************
> --- *** relation: noncoding_region_of_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The maximal intersection of exon and UTR ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW noncoding_region_of_exon AS
>   SELECT
>     feature_id AS noncoding_region_of_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_noncoding_region' OR cvterm.name = 'noncoding_region_of_exon';
> 
> --- ************************************************
> --- *** relation: coding_region_of_exon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of an exon that encodes for p ***
> --- *** rotein sequence.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW coding_region_of_exon AS
>   SELECT
>     feature_id AS coding_region_of_exon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_coding_exon_coding_region' OR cvterm.name = 'three_prime_coding exon_coding_region' OR cvterm.name = 'coding_region_of_exon';
> 
> --- ************************************************
> --- *** relation: endonuclease_spliced_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An intron that spliced via endonucleolyt ***
> --- *** ic cleavage and ligation rather than tra ***
> --- *** nsesterification.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW endonuclease_spliced_intron AS
>   SELECT
>     feature_id AS endonuclease_spliced_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'archaeal_intron' OR cvterm.name = 'tRNA_intron' OR cvterm.name = 'endonuclease_spliced_intron';
> 
> --- ************************************************
> --- *** relation: protein_coding_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW protein_coding_gene AS
>   SELECT
>     feature_id AS protein_coding_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_with_polyadenylated_mRNA' OR cvterm.name = 'gene_with_mRNA_with_frameshift' OR cvterm.name = 'gene_with_edited_transcript' OR cvterm.name = 'gene_with_recoded_mRNA' OR cvterm.name = 'gene_with_stop_codon_read_through' OR cvterm.name = 'gene_with_mRNA_recoded_by_translational_bypass' OR cvterm.name = 'gene_with_transcript_with_translational_frameshift' OR cvterm.name = 'gene_with_stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'gene_with_stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'protein_coding_gene';
> 
> --- ************************************************
> --- *** relation: transgenic_insertion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW transgenic_insertion AS
>   SELECT
>     feature_id AS transgenic_insertion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transgenic_insertion';
> 
> --- ************************************************
> --- *** relation: retrogene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW retrogene AS
>   SELECT
>     feature_id AS retrogene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'retrogene';
> 
> --- ************************************************
> --- *** relation: silenced_by_rna_interference ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an epigenetic pr ***
> --- *** ocess where a gene is inactivated by RNA ***
> --- ***  interference.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW silenced_by_rna_interference AS
>   SELECT
>     feature_id AS silenced_by_rna_interference_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'silenced_by_RNA_interference';
> 
> --- ************************************************
> --- *** relation: silenced_by_histone_modification ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an epigenetic pr ***
> --- *** ocess where a gene is inactivated by his ***
> --- *** tone modification.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW silenced_by_histone_modification AS
>   SELECT
>     feature_id AS silenced_by_histone_modification_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'silenced_by_histone_methylation' OR cvterm.name = 'silenced_by_histone_deacetylation' OR cvterm.name = 'silenced_by_histone_modification';
> 
> --- ************************************************
> --- *** relation: silenced_by_histone_methylation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an epigenetic pr ***
> --- *** ocess where a gene is inactivated by his ***
> --- *** tone methylation.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW silenced_by_histone_methylation AS
>   SELECT
>     feature_id AS silenced_by_histone_methylation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'silenced_by_histone_methylation';
> 
> --- ************************************************
> --- *** relation: silenced_by_histone_deacetylation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing an epigenetic pr ***
> --- *** ocess where a gene is inactivated by his ***
> --- *** tone deacetylation.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW silenced_by_histone_deacetylation AS
>   SELECT
>     feature_id AS silenced_by_histone_deacetylation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'silenced_by_histone_deacetylation';
> 
> --- ************************************************
> --- *** relation: gene_silenced_by_rna_interference ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is silenced by RNA interfere ***
> --- *** nce.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_silenced_by_rna_interference AS
>   SELECT
>     feature_id AS gene_silenced_by_rna_interference_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_silenced_by_RNA_interference';
> 
> --- ************************************************
> --- *** relation: gene_silenced_by_histone_modification ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is silenced by histone modif ***
> --- *** ication.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_silenced_by_histone_modification AS
>   SELECT
>     feature_id AS gene_silenced_by_histone_modification_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_silenced_by_histone_methylation' OR cvterm.name = 'gene_silenced_by_histone_deacetylation' OR cvterm.name = 'gene_silenced_by_histone_modification';
> 
> --- ************************************************
> --- *** relation: gene_silenced_by_histone_methylation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is silenced by histone methy ***
> --- *** lation.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_silenced_by_histone_methylation AS
>   SELECT
>     feature_id AS gene_silenced_by_histone_methylation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_silenced_by_histone_methylation';
> 
> --- ************************************************
> --- *** relation: gene_silenced_by_histone_deacetylation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is silenced by histone deace ***
> --- *** tylation.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_silenced_by_histone_deacetylation AS
>   SELECT
>     feature_id AS gene_silenced_by_histone_deacetylation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_silenced_by_histone_deacetylation';
> 
> --- ************************************************
> --- *** relation: dihydrouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified RNA base in which the 5,6-dih ***
> --- *** ydrouracil is bound to the ribose ring.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW dihydrouridine AS
>   SELECT
>     feature_id AS dihydrouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dihydrouridine';
> 
> --- ************************************************
> --- *** relation: pseudouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified RNA base in which the 5- posi ***
> --- *** tion of the uracil is bound to the ribos ***
> --- *** e ring instead of the 4- position.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW pseudouridine AS
>   SELECT
>     feature_id AS pseudouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pseudouridine';
> 
> --- ************************************************
> --- *** relation: inosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified RNA base in which hypoxanthin ***
> --- *** e is bound to the ribose ring.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW inosine AS
>   SELECT
>     feature_id AS inosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_inosine' OR cvterm.name = 'methylinosine' OR cvterm.name = 'one_methylinosine' OR cvterm.name = 'one_two_prime_O_dimethylinosine' OR cvterm.name = 'two_prime_O_methylinosine' OR cvterm.name = 'inosine';
> 
> --- ************************************************
> --- *** relation: seven_methylguanine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified RNA base in which guanine is  ***
> --- *** methylated at the 7- position.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW seven_methylguanine AS
>   SELECT
>     feature_id AS seven_methylguanine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'seven_methylguanine';
> 
> --- ************************************************
> --- *** relation: ribothymidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified RNA base in which thymine is  ***
> --- *** bound to the ribose ring.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW ribothymidine AS
>   SELECT
>     feature_id AS ribothymidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ribothymidine';
> 
> --- ************************************************
> --- *** relation: methylinosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified RNA base in which methylhypox ***
> --- *** anthine is bound to the ribose ring.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW methylinosine AS
>   SELECT
>     feature_id AS methylinosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylinosine';
> 
> --- ************************************************
> --- *** relation: mobile ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a feature that h ***
> --- *** as either intra-genome or intracellular  ***
> --- *** mobility.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW mobile AS
>   SELECT
>     feature_id AS mobile_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mobile';
> 
> --- ************************************************
> --- *** relation: replicon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region containing at least one unique  ***
> --- *** origin of replication and a unique termi ***
> --- *** nation site.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW replicon AS
>   SELECT
>     feature_id AS replicon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plasmid' OR cvterm.name = 'chromosome' OR cvterm.name = 'vector_replicon' OR cvterm.name = 'maxicircle' OR cvterm.name = 'minicircle' OR cvterm.name = 'viral_sequence' OR cvterm.name = 'engineered_plasmid' OR cvterm.name = 'episome' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'mitochondrial_chromosome' OR cvterm.name = 'chloroplast_chromosome' OR cvterm.name = 'chromoplast_chromosome' OR cvterm.name = 'cyanelle_chromosome' OR cvterm.name = 'leucoplast_chromosome' OR cvterm.name = 'macronuclear_chromosome' OR cvterm.name = 'micronuclear_chromosome' OR cvterm.name = 'nuclear_chromosome' OR cvterm.name = 'nucleomorphic_chromosome' OR cvterm.name = 'DNA_chromosome' OR cvterm.name = 'RNA_chromosome' OR cvterm.name = 'apicoplast_chromosome' OR cvterm.name = 'double_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_DNA_chromosome' OR cvterm.name = 'linear_double_stranded_DNA_chromosome' OR cvterm.name = 'circular_double_stranded_DNA_chromosome' OR cvterm.name = 'linear_single_stranded_DNA_chromosome' OR cvterm.name = 'circular_single_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_RNA_chromosome' OR cvterm.name = 'double_stranded_RNA_chromosome' OR cvterm.name = 'linear_single_stranded_RNA_chromosome' OR cvterm.name = 'circular_single_stranded_RNA_chromosome' OR cvterm.name = 'linear_double_stranded_RNA_chromosome' OR cvterm.name = 'circular_double_stranded_RNA_chromosome' OR cvterm.name = 'YAC' OR cvterm.name = 'BAC' OR cvterm.name = 'PAC' OR cvterm.name = 'cosmid' OR cvterm.name = 'phagemid' OR cvterm.name = 'fosmid' OR cvterm.name = 'lambda_vector' OR cvterm.name = 'plasmid_vector' OR cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'replicon';
> 
> --- ************************************************
> --- *** relation: base ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A base is a sequence feature that corres ***
> --- *** ponds to a single unit of a nucleotide p ***
> --- *** olymer.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW base AS
>   SELECT
>     feature_id AS base_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_RNA_base_feature' OR cvterm.name = 'modified_base_site' OR cvterm.name = 'inosine' OR cvterm.name = 'seven_methylguanine' OR cvterm.name = 'ribothymidine' OR cvterm.name = 'modified_adenosine' OR cvterm.name = 'modified_cytidine' OR cvterm.name = 'modified_guanosine' OR cvterm.name = 'modified_uridine' OR cvterm.name = 'modified_inosine' OR cvterm.name = 'methylinosine' OR cvterm.name = 'one_methylinosine' OR cvterm.name = 'one_two_prime_O_dimethylinosine' OR cvterm.name = 'two_prime_O_methylinosine' OR cvterm.name = 'one_methyladenosine' OR cvterm.name = 'two_methyladenosine' OR cvterm.name = 'N6_methyladenosine' OR cvterm.name = 'two_prime_O_methyladenosine' OR cvterm.name = 'two_methylthio_N6_methyladenosine' OR cvterm.name = 'N6_isopentenyladenosine' OR cvterm.name = 'two_methylthio_N6_isopentenyladenosine' OR cvterm.name = 'N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'two_methylthio_N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'N6_glycinylcarbamoyladenosine' OR cvterm.name = 'N6_threonylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_threonyl_carbamoyladenosine' OR cvterm.name = 'N6_methyl_N6_threonylcarbamoyladenosine' OR cvterm.name = 'N6_hydroxynorvalylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine' OR cvterm.name = 'two_prime_O_ribosyladenosine_phosphate' OR cvterm.name = 'N6_N6_dimethyladenosine' OR cvterm.name = 'N6_2_prime_O_dimethyladenosine' OR cvterm.name = 'N6_N6_2_prime_O_trimethyladenosine' OR cvterm.name = 'one_two_prime_O_dimethyladenosine' OR cvterm.name = 'N6_acetyladenosine' OR cvterm.name = 'three_methylcytidine' OR cvterm.name = 'five_methylcytidine' OR cvterm.name = 'two_prime_O_methylcytidine' OR cvterm.name = 'two_thiocytidine' OR cvterm.name = 'N4_acetylcytidine' OR cvterm.name = 'five_formylcytidine' OR cvterm.name = 'five_two_prime_O_dimethylcytidine' OR cvterm.name = 'N4_acetyl_2_prime_O_methylcytidine' OR cvterm.name = 'lysidine' OR cvterm.name = 'N4_methylcytidine' OR cvterm.name = 'N4_2_prime_O_dimethylcytidine' OR cvterm.name = 'five_hydroxymethylcytidine' OR cvterm.name = 'five_formyl_two_prime_O_methylcytidine' OR cvterm.name = 'N4_N4_2_prime_O_trimethylcytidine' OR cvterm.name = 'seven_deazaguanosine' OR cvterm.name = 'one_methylguanosine' OR cvterm.name = 'N2_methylguanosine' OR cvterm.name = 'seven_methylguanosine' OR cvterm.name = 'two_prime_O_methylguanosine' OR cvterm.name = 'N2_N2_dimethylguanosine' OR cvterm.name = 'N2_2_prime_O_dimethylguanosine' OR cvterm.name = 'N2_N2_2_prime_O_trimethylguanosine' OR cvterm.name = 'two_prime_O_ribosylguanosine_phosphate' OR cvterm.name = 'wybutosine' OR cvterm.name = 'peroxywybutosine' OR cvterm.name = 'hydroxywybutosine' OR cvterm.name = 'undermodified_hydroxywybutosine' OR cvterm.name = 'wyosine' OR cvterm.name = 'methylwyosine' OR cvterm.name = 'N2_7_dimethylguanosine' OR cvterm.name = 'N2_N2_7_trimethylguanosine' OR cvterm.name = 'one_two_prime_O_dimethylguanosine' OR cvterm.name = 'four_demethylwyosine' OR cvterm.name = 'isowyosine' OR cvterm.name = 'N2_7_2prirme_O_trimethylguanosine' OR cvterm.name = 'queuosine' OR cvterm.name = 'epoxyqueuosine' OR cvterm.name = 'galactosyl_queuosine' OR cvterm.name = 'mannosyl_queuosine' OR cvterm.name = 'seven_cyano_seven_deazaguanosine' OR cvterm.name = 'seven_aminomethyl_seven_deazaguanosine' OR cvterm.name = 'archaeosine' OR cvterm.name = 'dihydrouridine' OR cvterm.name = 'pseudouridine' OR cvterm.name = 'five_methyluridine' OR cvterm.name = 'two_prime_O_methyluridine' OR cvterm.name = 'five_two_prime_O_dimethyluridine' OR cvterm.name = 'one_methylpseudouridine' OR cvterm.name = 'two_prime_O_methylpseudouridine' OR cvterm.name = 'two_thiouridine' OR cvterm.name = 'four_thiouridine' OR cvterm.name = 'five_methyl_2_thiouridine' OR cvterm.name = 'two_thio_two_prime_O_methyluridine' OR cvterm.name = 'three_three_amino_three_carboxypropyl_uridine' OR cvterm.name = 'five_hydroxyuridine' OR cvterm.name = 'five_methoxyuridine' OR cvterm.name = 'uridine_five_oxyacetic_acid' OR cvterm.name = 'uridine_five_oxyacetic_acid_methyl_ester' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine_methyl_ester' OR cvterm.name = 'five_methoxycarbonylmethyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_thiouridine' OR cvterm.name = 'five_aminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyluridine' OR cvterm.name = 'five_methylaminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyl_two_selenouridine' OR cvterm.name = 'five_carbamoylmethyluridine' OR cvterm.name = 'five_carbamoylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_thiouridine' OR cvterm.name = 'three_methyluridine' OR cvterm.name = 'one_methyl_three_three_amino_three_carboxypropyl_pseudouridine' OR cvterm.name = 'five_carboxymethyluridine' OR cvterm.name = 'three_two_prime_O_dimethyluridine' OR cvterm.name = 'five_methyldihydrouridine' OR cvterm.name = 'three_methylpseudouridine' OR cvterm.name = 'five_taurinomethyluridine' OR cvterm.name = 'five_taurinomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_uridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'methylated_base_feature' OR cvterm.name = 'methylated_C' OR cvterm.name = 'methylated_A' OR cvterm.name = 'base';
> 
> --- ************************************************
> --- *** relation: amino_acid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence feature that corresponds to a ***
> --- ***  single amino acid residue in a polypept ***
> --- *** ide.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW amino_acid AS
>   SELECT
>     feature_id AS amino_acid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'catalytic_residue' OR cvterm.name = 'modified_amino_acid_feature' OR cvterm.name = 'alanine' OR cvterm.name = 'valine' OR cvterm.name = 'leucine' OR cvterm.name = 'isoleucine' OR cvterm.name = 'proline' OR cvterm.name = 'tryptophan' OR cvterm.name = 'phenylalanine' OR cvterm.name = 'methionine' OR cvterm.name = 'glycine' OR cvterm.name = 'serine' OR cvterm.name = 'threonine' OR cvterm.name = 'tyrosine' OR cvterm.name = 'cysteine' OR cvterm.name = 'glutamine' OR cvterm.name = 'asparagine' OR cvterm.name = 'lysine' OR cvterm.name = 'argenine' OR cvterm.name = 'histidine' OR cvterm.name = 'aspartic_acid' OR cvterm.name = 'glutamic_acid' OR cvterm.name = 'selenocysteine' OR cvterm.name = 'pyrrolysine' OR cvterm.name = 'modified_glycine' OR cvterm.name = 'modified_L_alanine' OR cvterm.name = 'modified_L_asparagine' OR cvterm.name = 'modified_L_aspartic_acid' OR cvterm.name = 'modified_L_cysteine' OR cvterm.name = 'modified_L_glutamic_acid' OR cvterm.name = 'modified_L_threonine' OR cvterm.name = 'modified_L_tryptophan' OR cvterm.name = 'modified_L_glutamine' OR cvterm.name = 'modified_L_methionine' OR cvterm.name = 'modified_L_isoleucine' OR cvterm.name = 'modified_L_phenylalanine' OR cvterm.name = 'modified_L_histidine' OR cvterm.name = 'modified_L_serine' OR cvterm.name = 'modified_L_lysine' OR cvterm.name = 'modified_L_leucine' OR cvterm.name = 'modified_L_selenocysteine' OR cvterm.name = 'modified_L_valine' OR cvterm.name = 'modified_L_proline' OR cvterm.name = 'modified_L_tyrosine' OR cvterm.name = 'modified_L_arginine' OR cvterm.name = 'amino_acid';
> 
> --- ************************************************
> --- *** relation: major_tss ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW major_tss AS
>   SELECT
>     feature_id AS major_tss_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'major_TSS';
> 
> --- ************************************************
> --- *** relation: minor_tss ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW minor_tss AS
>   SELECT
>     feature_id AS minor_tss_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minor_TSS';
> 
> --- ************************************************
> --- *** relation: tss_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The region of a gene from the 5' most TS ***
> --- *** S to the 3' TSS.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW tss_region AS
>   SELECT
>     feature_id AS tss_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'TSS_region';
> 
> --- ************************************************
> --- *** relation: encodes_alternate_transcription_start_sites ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW encodes_alternate_transcription_start_sites AS
>   SELECT
>     feature_id AS encodes_alternate_transcription_start_sites_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'encodes_alternate_transcription_start_sites';
> 
> --- ************************************************
> --- *** relation: mirna_primary_transcript_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A part of an miRNA primary_transcript.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirna_primary_transcript_region AS
>   SELECT
>     feature_id AS mirna_primary_transcript_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pre_miRNA' OR cvterm.name = 'miRNA_stem' OR cvterm.name = 'miRNA_loop' OR cvterm.name = 'miRNA_antiguide' OR cvterm.name = 'miRNA_primary_transcript_region';
> 
> --- ************************************************
> --- *** relation: pre_mirna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The 60-70 nucleotide region remain after ***
> --- ***  Drosha processing of the primary transc ***
> --- *** ript, that folds back upon itself to for ***
> --- *** m a hairpin sructure.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW pre_mirna AS
>   SELECT
>     feature_id AS pre_mirna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pre_miRNA';
> 
> --- ************************************************
> --- *** relation: mirna_stem ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The stem of the hairpin loop formed by f ***
> --- *** olding of the pre-miRNA.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirna_stem AS
>   SELECT
>     feature_id AS mirna_stem_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'miRNA_stem';
> 
> --- ************************************************
> --- *** relation: mirna_loop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The loop of the hairpin loop formed by f ***
> --- *** olding of the pre-miRNA.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirna_loop AS
>   SELECT
>     feature_id AS mirna_loop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'miRNA_loop';
> 
> --- ************************************************
> --- *** relation: synthetic_oligo ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An oligo composed of synthetic nucleotid ***
> --- *** es.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW synthetic_oligo AS
>   SELECT
>     feature_id AS synthetic_oligo_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'morpholino_oligo' OR cvterm.name = 'PNA_oligo' OR cvterm.name = 'LNA_oligo' OR cvterm.name = 'TNA_oligo' OR cvterm.name = 'GNA_oligo' OR cvterm.name = 'R_GNA_oligo' OR cvterm.name = 'S_GNA_oligo' OR cvterm.name = 'synthetic_oligo';
> 
> --- ************************************************
> --- *** relation: assembly ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of the genome of known length t ***
> --- *** hat is composed by ordering and aligning ***
> --- ***  two or more different regions.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW assembly AS
>   SELECT
>     feature_id AS assembly_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_assembly' OR cvterm.name = 'fragment_assembly' OR cvterm.name = 'supercontig' OR cvterm.name = 'contig' OR cvterm.name = 'tiling_path' OR cvterm.name = 'virtual_sequence' OR cvterm.name = 'golden_path' OR cvterm.name = 'ultracontig' OR cvterm.name = 'expressed_sequence_assembly' OR cvterm.name = 'fingerprint_map' OR cvterm.name = 'STS_map' OR cvterm.name = 'RH_map' OR cvterm.name = 'assembly';
> 
> --- ************************************************
> --- *** relation: fragment_assembly ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A fragment assembly is a genome assembly ***
> --- ***  that orders overlapping fragments of th ***
> --- *** e genome based on landmark sequences. Th ***
> --- *** e base pair distance between the landmar ***
> --- *** ks is known allowing additivity of lengt ***
> --- *** hs.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW fragment_assembly AS
>   SELECT
>     feature_id AS fragment_assembly_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'fingerprint_map' OR cvterm.name = 'STS_map' OR cvterm.name = 'RH_map' OR cvterm.name = 'fragment_assembly';
> 
> --- ************************************************
> --- *** relation: fingerprint_map ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A fingerprint_map is a physical map comp ***
> --- *** osed of restriction fragments.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW fingerprint_map AS
>   SELECT
>     feature_id AS fingerprint_map_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'fingerprint_map';
> 
> --- ************************************************
> --- *** relation: sts_map ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An STS map is a physical map organized b ***
> --- *** y the unique STS landmarks.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW sts_map AS
>   SELECT
>     feature_id AS sts_map_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'STS_map';
> 
> --- ************************************************
> --- *** relation: rh_map ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A radiation hybrid map is a physical map ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW rh_map AS
>   SELECT
>     feature_id AS rh_map_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RH_map';
> 
> --- ************************************************
> --- *** relation: sonicate_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA fragment generated by sonication.  ***
> --- *** Sonication is a technique used to sheer  ***
> --- *** DNA into smaller fragments.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW sonicate_fragment AS
>   SELECT
>     feature_id AS sonicate_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sonicate_fragment';
> 
> --- ************************************************
> --- *** relation: polyploid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A kind of chromosome variation where the ***
> --- ***  chromosome complement is an exact multi ***
> --- *** ple of the haploid number and is greater ***
> --- ***  than the diploid number.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW polyploid AS
>   SELECT
>     feature_id AS polyploid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'autopolyploid' OR cvterm.name = 'allopolyploid' OR cvterm.name = 'polyploid';
> 
> --- ************************************************
> --- *** relation: autopolyploid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A polyploid where the multiple chromosom ***
> --- *** e set was derived from the same organism ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW autopolyploid AS
>   SELECT
>     feature_id AS autopolyploid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'autopolyploid';
> 
> --- ************************************************
> --- *** relation: allopolyploid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A polyploid where the multiple chromosom ***
> --- *** e set was derived from a different organ ***
> --- *** ism.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW allopolyploid AS
>   SELECT
>     feature_id AS allopolyploid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'allopolyploid';
> 
> --- ************************************************
> --- *** relation: homing_endonuclease_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The binding site (recognition site) of a ***
> --- ***  homing endonuclease. The binding site i ***
> --- *** s typically large.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW homing_endonuclease_binding_site AS
>   SELECT
>     feature_id AS homing_endonuclease_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'homing_endonuclease_binding_site';
> 
> --- ************************************************
> --- *** relation: octamer_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence element characteristic of som ***
> --- *** e RNA polymerase II promoters with seque ***
> --- *** nce ATTGCAT that binds Pou-domain transc ***
> --- *** ription factors.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW octamer_motif AS
>   SELECT
>     feature_id AS octamer_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'octamer_motif';
> 
> --- ************************************************
> --- *** relation: apicoplast_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome originating in an apicoplas ***
> --- *** t.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW apicoplast_chromosome AS
>   SELECT
>     feature_id AS apicoplast_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'apicoplast_chromosome';
> 
> --- ************************************************
> --- *** relation: sequence_collection ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A collection of discontinuous sequences. ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_collection AS
>   SELECT
>     feature_id AS sequence_collection_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'kinetoplast' OR cvterm.name = 'genome' OR cvterm.name = 'contig_collection' OR cvterm.name = 'sequence_collection';
> 
> --- ************************************************
> --- *** relation: overlapping_feature_set ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A continuous region of sequence composed ***
> --- ***  of the overlapping of multiple sequence ***
> --- *** _features, which ultimately provides evi ***
> --- *** dence for another sequence_feature.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW overlapping_feature_set AS
>   SELECT
>     feature_id AS overlapping_feature_set_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'overlapping_EST_set' OR cvterm.name = 'overlapping_feature_set';
> 
> --- ************************************************
> --- *** relation: overlapping_est_set ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A continous experimental result region e ***
> --- *** xtending the length of multiple overlapp ***
> --- *** ing EST's.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW overlapping_est_set AS
>   SELECT
>     feature_id AS overlapping_est_set_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'overlapping_EST_set';
> 
> --- ************************************************
> --- *** relation: ncrna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW ncrna_gene AS
>   SELECT
>     feature_id AS ncrna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gRNA_gene' OR cvterm.name = 'miRNA_gene' OR cvterm.name = 'scRNA_gene' OR cvterm.name = 'snoRNA_gene' OR cvterm.name = 'snRNA_gene' OR cvterm.name = 'SRP_RNA_gene' OR cvterm.name = 'stRNA_gene' OR cvterm.name = 'tmRNA_gene' OR cvterm.name = 'tRNA_gene' OR cvterm.name = 'ncRNA_gene';
> 
> --- ************************************************
> --- *** relation: grna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW grna_gene AS
>   SELECT
>     feature_id AS grna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gRNA_gene';
> 
> --- ************************************************
> --- *** relation: mirna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirna_gene AS
>   SELECT
>     feature_id AS mirna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'miRNA_gene';
> 
> --- ************************************************
> --- *** relation: scrna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW scrna_gene AS
>   SELECT
>     feature_id AS scrna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'scRNA_gene';
> 
> --- ************************************************
> --- *** relation: snorna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW snorna_gene AS
>   SELECT
>     feature_id AS snorna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'snoRNA_gene';
> 
> --- ************************************************
> --- *** relation: snrna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW snrna_gene AS
>   SELECT
>     feature_id AS snrna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'snRNA_gene';
> 
> --- ************************************************
> --- *** relation: srp_rna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW srp_rna_gene AS
>   SELECT
>     feature_id AS srp_rna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SRP_RNA_gene';
> 
> --- ************************************************
> --- *** relation: strna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW strna_gene AS
>   SELECT
>     feature_id AS strna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'stRNA_gene';
> 
> --- ************************************************
> --- *** relation: tmrna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW tmrna_gene AS
>   SELECT
>     feature_id AS tmrna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tmRNA_gene';
> 
> --- ************************************************
> --- *** relation: trna_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW trna_gene AS
>   SELECT
>     feature_id AS trna_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tRNA_gene';
> 
> --- ************************************************
> --- *** relation: modified_adenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified adenine is an adenine base fe ***
> --- *** ature that has been altered.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_adenosine AS
>   SELECT
>     feature_id AS modified_adenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'one_methyladenosine' OR cvterm.name = 'two_methyladenosine' OR cvterm.name = 'N6_methyladenosine' OR cvterm.name = 'two_prime_O_methyladenosine' OR cvterm.name = 'two_methylthio_N6_methyladenosine' OR cvterm.name = 'N6_isopentenyladenosine' OR cvterm.name = 'two_methylthio_N6_isopentenyladenosine' OR cvterm.name = 'N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'two_methylthio_N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'N6_glycinylcarbamoyladenosine' OR cvterm.name = 'N6_threonylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_threonyl_carbamoyladenosine' OR cvterm.name = 'N6_methyl_N6_threonylcarbamoyladenosine' OR cvterm.name = 'N6_hydroxynorvalylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine' OR cvterm.name = 'two_prime_O_ribosyladenosine_phosphate' OR cvterm.name = 'N6_N6_dimethyladenosine' OR cvterm.name = 'N6_2_prime_O_dimethyladenosine' OR cvterm.name = 'N6_N6_2_prime_O_trimethyladenosine' OR cvterm.name = 'one_two_prime_O_dimethyladenosine' OR cvterm.name = 'N6_acetyladenosine' OR cvterm.name = 'modified_adenosine';
> 
> --- ************************************************
> --- *** relation: modified_inosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified inosine is an inosine base fe ***
> --- *** ature that has been altered.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_inosine AS
>   SELECT
>     feature_id AS modified_inosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylinosine' OR cvterm.name = 'one_methylinosine' OR cvterm.name = 'one_two_prime_O_dimethylinosine' OR cvterm.name = 'two_prime_O_methylinosine' OR cvterm.name = 'modified_inosine';
> 
> --- ************************************************
> --- *** relation: modified_cytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A modified cytidine is a cytidine base f ***
> --- *** eature which has been altered.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_cytidine AS
>   SELECT
>     feature_id AS modified_cytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_methylcytidine' OR cvterm.name = 'five_methylcytidine' OR cvterm.name = 'two_prime_O_methylcytidine' OR cvterm.name = 'two_thiocytidine' OR cvterm.name = 'N4_acetylcytidine' OR cvterm.name = 'five_formylcytidine' OR cvterm.name = 'five_two_prime_O_dimethylcytidine' OR cvterm.name = 'N4_acetyl_2_prime_O_methylcytidine' OR cvterm.name = 'lysidine' OR cvterm.name = 'N4_methylcytidine' OR cvterm.name = 'N4_2_prime_O_dimethylcytidine' OR cvterm.name = 'five_hydroxymethylcytidine' OR cvterm.name = 'five_formyl_two_prime_O_methylcytidine' OR cvterm.name = 'N4_N4_2_prime_O_trimethylcytidine' OR cvterm.name = 'modified_cytidine';
> 
> --- ************************************************
> --- *** relation: modified_guanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_guanosine AS
>   SELECT
>     feature_id AS modified_guanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'seven_deazaguanosine' OR cvterm.name = 'one_methylguanosine' OR cvterm.name = 'N2_methylguanosine' OR cvterm.name = 'seven_methylguanosine' OR cvterm.name = 'two_prime_O_methylguanosine' OR cvterm.name = 'N2_N2_dimethylguanosine' OR cvterm.name = 'N2_2_prime_O_dimethylguanosine' OR cvterm.name = 'N2_N2_2_prime_O_trimethylguanosine' OR cvterm.name = 'two_prime_O_ribosylguanosine_phosphate' OR cvterm.name = 'wybutosine' OR cvterm.name = 'peroxywybutosine' OR cvterm.name = 'hydroxywybutosine' OR cvterm.name = 'undermodified_hydroxywybutosine' OR cvterm.name = 'wyosine' OR cvterm.name = 'methylwyosine' OR cvterm.name = 'N2_7_dimethylguanosine' OR cvterm.name = 'N2_N2_7_trimethylguanosine' OR cvterm.name = 'one_two_prime_O_dimethylguanosine' OR cvterm.name = 'four_demethylwyosine' OR cvterm.name = 'isowyosine' OR cvterm.name = 'N2_7_2prirme_O_trimethylguanosine' OR cvterm.name = 'queuosine' OR cvterm.name = 'epoxyqueuosine' OR cvterm.name = 'galactosyl_queuosine' OR cvterm.name = 'mannosyl_queuosine' OR cvterm.name = 'seven_cyano_seven_deazaguanosine' OR cvterm.name = 'seven_aminomethyl_seven_deazaguanosine' OR cvterm.name = 'archaeosine' OR cvterm.name = 'modified_guanosine';
> 
> --- ************************************************
> --- *** relation: modified_uridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_uridine AS
>   SELECT
>     feature_id AS modified_uridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dihydrouridine' OR cvterm.name = 'pseudouridine' OR cvterm.name = 'five_methyluridine' OR cvterm.name = 'two_prime_O_methyluridine' OR cvterm.name = 'five_two_prime_O_dimethyluridine' OR cvterm.name = 'one_methylpseudouridine' OR cvterm.name = 'two_prime_O_methylpseudouridine' OR cvterm.name = 'two_thiouridine' OR cvterm.name = 'four_thiouridine' OR cvterm.name = 'five_methyl_2_thiouridine' OR cvterm.name = 'two_thio_two_prime_O_methyluridine' OR cvterm.name = 'three_three_amino_three_carboxypropyl_uridine' OR cvterm.name = 'five_hydroxyuridine' OR cvterm.name = 'five_methoxyuridine' OR cvterm.name = 'uridine_five_oxyacetic_acid' OR cvterm.name = 'uridine_five_oxyacetic_acid_methyl_ester' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine_methyl_ester' OR cvterm.name = 'five_methoxycarbonylmethyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_thiouridine' OR cvterm.name = 'five_aminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyluridine' OR cvterm.name = 'five_methylaminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyl_two_selenouridine' OR cvterm.name = 'five_carbamoylmethyluridine' OR cvterm.name = 'five_carbamoylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_thiouridine' OR cvterm.name = 'three_methyluridine' OR cvterm.name = 'one_methyl_three_three_amino_three_carboxypropyl_pseudouridine' OR cvterm.name = 'five_carboxymethyluridine' OR cvterm.name = 'three_two_prime_O_dimethyluridine' OR cvterm.name = 'five_methyldihydrouridine' OR cvterm.name = 'three_methylpseudouridine' OR cvterm.name = 'five_taurinomethyluridine' OR cvterm.name = 'five_taurinomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_uridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'modified_uridine';
> 
> --- ************************************************
> --- *** relation: one_methylinosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 1-methylinosine is a modified insosine.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW one_methylinosine AS
>   SELECT
>     feature_id AS one_methylinosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'one_methylinosine';
> 
> --- ************************************************
> --- *** relation: one_two_prime_o_dimethylinosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 1,2'-O-dimethylinosine is a modified ino ***
> --- *** sine.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW one_two_prime_o_dimethylinosine AS
>   SELECT
>     feature_id AS one_two_prime_o_dimethylinosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'one_two_prime_O_dimethylinosine';
> 
> --- ************************************************
> --- *** relation: two_prime_o_methylinosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2'-O-methylinosine is a modified inosine ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_prime_o_methylinosine AS
>   SELECT
>     feature_id AS two_prime_o_methylinosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_prime_O_methylinosine';
> 
> --- ************************************************
> --- *** relation: three_methylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 3-methylcytidine is a modified cytidine. ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_methylcytidine AS
>   SELECT
>     feature_id AS three_methylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_methylcytidine';
> 
> --- ************************************************
> --- *** relation: five_methylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5-methylcytidine is a modified cytidine. ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_methylcytidine AS
>   SELECT
>     feature_id AS five_methylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methylcytidine';
> 
> --- ************************************************
> --- *** relation: two_prime_o_methylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2'-O-methylcytidine is a modified cytidi ***
> --- *** ne.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_prime_o_methylcytidine AS
>   SELECT
>     feature_id AS two_prime_o_methylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_prime_O_methylcytidine';
> 
> --- ************************************************
> --- *** relation: two_thiocytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2-thiocytidine is a modified cytidine.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_thiocytidine AS
>   SELECT
>     feature_id AS two_thiocytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_thiocytidine';
> 
> --- ************************************************
> --- *** relation: n4_acetylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N4-acetylcytidine is a modified cytidine ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW n4_acetylcytidine AS
>   SELECT
>     feature_id AS n4_acetylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N4_acetylcytidine';
> 
> --- ************************************************
> --- *** relation: five_formylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5-formylcytidine is a modified cytidine. ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_formylcytidine AS
>   SELECT
>     feature_id AS five_formylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_formylcytidine';
> 
> --- ************************************************
> --- *** relation: five_two_prime_o_dimethylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5,2'-O-dimethylcytidine is a modified cy ***
> --- *** tidine.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_two_prime_o_dimethylcytidine AS
>   SELECT
>     feature_id AS five_two_prime_o_dimethylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_two_prime_O_dimethylcytidine';
> 
> --- ************************************************
> --- *** relation: n4_acetyl_2_prime_o_methylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N4-acetyl-2'-O-methylcytidine is a modif ***
> --- *** ied cytidine.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW n4_acetyl_2_prime_o_methylcytidine AS
>   SELECT
>     feature_id AS n4_acetyl_2_prime_o_methylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N4_acetyl_2_prime_O_methylcytidine';
> 
> --- ************************************************
> --- *** relation: lysidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Lysidine is a modified cytidine.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW lysidine AS
>   SELECT
>     feature_id AS lysidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'lysidine';
> 
> --- ************************************************
> --- *** relation: n4_methylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N4-methylcytidine is a modified cytidine ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW n4_methylcytidine AS
>   SELECT
>     feature_id AS n4_methylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N4_methylcytidine';
> 
> --- ************************************************
> --- *** relation: n4_2_prime_o_dimethylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N4,2'-O-dimethylcytidine is a modified c ***
> --- *** ytidine.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW n4_2_prime_o_dimethylcytidine AS
>   SELECT
>     feature_id AS n4_2_prime_o_dimethylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N4_2_prime_O_dimethylcytidine';
> 
> --- ************************************************
> --- *** relation: five_hydroxymethylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5-hydroxymethylcytidine is a modified cy ***
> --- *** tidine.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_hydroxymethylcytidine AS
>   SELECT
>     feature_id AS five_hydroxymethylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_hydroxymethylcytidine';
> 
> --- ************************************************
> --- *** relation: five_formyl_two_prime_o_methylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5-formyl-2'-O-methylcytidine is a modifi ***
> --- *** ed cytidine.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_formyl_two_prime_o_methylcytidine AS
>   SELECT
>     feature_id AS five_formyl_two_prime_o_methylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_formyl_two_prime_O_methylcytidine';
> 
> --- ************************************************
> --- *** relation: n4_n4_2_prime_o_trimethylcytidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N4_N4_2_prime_O_trimethylcytidine is a m ***
> --- *** odified cytidine.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW n4_n4_2_prime_o_trimethylcytidine AS
>   SELECT
>     feature_id AS n4_n4_2_prime_o_trimethylcytidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N4_N4_2_prime_O_trimethylcytidine';
> 
> --- ************************************************
> --- *** relation: one_methyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 1_methyladenosine is a modified adenosin ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW one_methyladenosine AS
>   SELECT
>     feature_id AS one_methyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'one_methyladenosine';
> 
> --- ************************************************
> --- *** relation: two_methyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2_methyladenosine is a modified adenosin ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_methyladenosine AS
>   SELECT
>     feature_id AS two_methyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_methyladenosine';
> 
> --- ************************************************
> --- *** relation: n6_methyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_methyladenosine is a modified adenosi ***
> --- *** ne.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_methyladenosine AS
>   SELECT
>     feature_id AS n6_methyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_methyladenosine';
> 
> --- ************************************************
> --- *** relation: two_prime_o_methyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2prime_O_methyladenosine is a modified a ***
> --- *** denosine.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_prime_o_methyladenosine AS
>   SELECT
>     feature_id AS two_prime_o_methyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_prime_O_methyladenosine';
> 
> --- ************************************************
> --- *** relation: two_methylthio_n6_methyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2_methylthio_N6_methyladenosine is a mod ***
> --- *** ified adenosine.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_methylthio_n6_methyladenosine AS
>   SELECT
>     feature_id AS two_methylthio_n6_methyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_methylthio_N6_methyladenosine';
> 
> --- ************************************************
> --- *** relation: n6_isopentenyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_isopentenyladenosine is a modified ad ***
> --- *** enosine.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_isopentenyladenosine AS
>   SELECT
>     feature_id AS n6_isopentenyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_isopentenyladenosine';
> 
> --- ************************************************
> --- *** relation: two_methylthio_n6_isopentenyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2_methylthio_N6_isopentenyladenosine is  ***
> --- *** a modified adenosine.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_methylthio_n6_isopentenyladenosine AS
>   SELECT
>     feature_id AS two_methylthio_n6_isopentenyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_methylthio_N6_isopentenyladenosine';
> 
> --- ************************************************
> --- *** relation: n6_cis_hydroxyisopentenyl_adenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_cis_hydroxyisopentenyl_adenosine is a ***
> --- ***  modified adenosine.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_cis_hydroxyisopentenyl_adenosine AS
>   SELECT
>     feature_id AS n6_cis_hydroxyisopentenyl_adenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_cis_hydroxyisopentenyl_adenosine';
> 
> --- ************************************************
> --- *** relation: two_methylthio_n6_cis_hydroxyisopentenyl_adenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2_methylthio_N6_cis_hydroxyisopentenyl_a ***
> --- *** denosine is a modified adenosine.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_methylthio_n6_cis_hydroxyisopentenyl_adenosine AS
>   SELECT
>     feature_id AS two_methylthio_n6_cis_hydroxyisopentenyl_adenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_methylthio_N6_cis_hydroxyisopentenyl_adenosine';
> 
> --- ************************************************
> --- *** relation: n6_glycinylcarbamoyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_glycinylcarbamoyladenosine is a modif ***
> --- *** ied adenosine.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_glycinylcarbamoyladenosine AS
>   SELECT
>     feature_id AS n6_glycinylcarbamoyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_glycinylcarbamoyladenosine';
> 
> --- ************************************************
> --- *** relation: n6_threonylcarbamoyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_threonylcarbamoyladenosine is a modif ***
> --- *** ied adenosine.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_threonylcarbamoyladenosine AS
>   SELECT
>     feature_id AS n6_threonylcarbamoyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_threonylcarbamoyladenosine';
> 
> --- ************************************************
> --- *** relation: two_methylthio_n6_threonyl_carbamoyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2_methylthio_N6_threonyl_carbamoyladenos ***
> --- *** ine is a modified adenosine.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_methylthio_n6_threonyl_carbamoyladenosine AS
>   SELECT
>     feature_id AS two_methylthio_n6_threonyl_carbamoyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_methylthio_N6_threonyl_carbamoyladenosine';
> 
> --- ************************************************
> --- *** relation: n6_methyl_n6_threonylcarbamoyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_methyl_N6_threonylcarbamoyladenosine  ***
> --- *** is a modified adenosine.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_methyl_n6_threonylcarbamoyladenosine AS
>   SELECT
>     feature_id AS n6_methyl_n6_threonylcarbamoyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_methyl_N6_threonylcarbamoyladenosine';
> 
> --- ************************************************
> --- *** relation: n6_hydroxynorvalylcarbamoyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_hydroxynorvalylcarbamoyladenosine is  ***
> --- *** a modified adenosine.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_hydroxynorvalylcarbamoyladenosine AS
>   SELECT
>     feature_id AS n6_hydroxynorvalylcarbamoyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_hydroxynorvalylcarbamoyladenosine';
> 
> --- ************************************************
> --- *** relation: two_methylthio_n6_hydroxynorvalyl_carbamoyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2_methylthio_N6_hydroxynorvalyl_carbamoy ***
> --- *** ladenosine is a modified adenosine.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_methylthio_n6_hydroxynorvalyl_carbamoyladenosine AS
>   SELECT
>     feature_id AS two_methylthio_n6_hydroxynorvalyl_carbamoyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine';
> 
> --- ************************************************
> --- *** relation: two_prime_o_riboA_phosphate ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2prime_O_ribosyladenosine_phosphate is a ***
> --- ***  modified adenosine.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_prime_o_riboA_phosphate AS
>   SELECT
>     feature_id AS two_prime_o_riboA_phosphate_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_prime_O_ribosyladenosine_phosphate';
> 
> --- ************************************************
> --- *** relation: n6_n6_dimethyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_N6_dimethyladenosine is a modified ad ***
> --- *** enosine.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_n6_dimethyladenosine AS
>   SELECT
>     feature_id AS n6_n6_dimethyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_N6_dimethyladenosine';
> 
> --- ************************************************
> --- *** relation: n6_2_prime_o_dimethyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_2prime_O_dimethyladenosine is a modif ***
> --- *** ied adenosine.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_2_prime_o_dimethyladenosine AS
>   SELECT
>     feature_id AS n6_2_prime_o_dimethyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_2_prime_O_dimethyladenosine';
> 
> --- ************************************************
> --- *** relation: n6_n6_2_prime_o_trimethyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_N6_2prime_O_trimethyladenosine is a m ***
> --- *** odified adenosine.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_n6_2_prime_o_trimethyladenosine AS
>   SELECT
>     feature_id AS n6_n6_2_prime_o_trimethyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_N6_2_prime_O_trimethyladenosine';
> 
> --- ************************************************
> --- *** relation: one_two_prime_o_dimethyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 1,2'-O-dimethyladenosine is a modified a ***
> --- *** denosine.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW one_two_prime_o_dimethyladenosine AS
>   SELECT
>     feature_id AS one_two_prime_o_dimethyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'one_two_prime_O_dimethyladenosine';
> 
> --- ************************************************
> --- *** relation: n6_acetyladenosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N6_acetyladenosine is a modified adenosi ***
> --- *** ne.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW n6_acetyladenosine AS
>   SELECT
>     feature_id AS n6_acetyladenosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N6_acetyladenosine';
> 
> --- ************************************************
> --- *** relation: seven_deazaguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 7-deazaguanosine is a moddified guanosin ***
> --- *** e.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW seven_deazaguanosine AS
>   SELECT
>     feature_id AS seven_deazaguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'queuosine' OR cvterm.name = 'epoxyqueuosine' OR cvterm.name = 'galactosyl_queuosine' OR cvterm.name = 'mannosyl_queuosine' OR cvterm.name = 'seven_cyano_seven_deazaguanosine' OR cvterm.name = 'seven_aminomethyl_seven_deazaguanosine' OR cvterm.name = 'archaeosine' OR cvterm.name = 'seven_deazaguanosine';
> 
> --- ************************************************
> --- *** relation: queuosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Queuosine is a modified 7-deazoguanosine ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW queuosine AS
>   SELECT
>     feature_id AS queuosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'queuosine';
> 
> --- ************************************************
> --- *** relation: epoxyqueuosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Epoxyqueuosine is a modified 7-deazoguan ***
> --- *** osine.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW epoxyqueuosine AS
>   SELECT
>     feature_id AS epoxyqueuosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'epoxyqueuosine';
> 
> --- ************************************************
> --- *** relation: galactosyl_queuosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Galactosyl_queuosine is a modified 7-dea ***
> --- *** zoguanosine.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW galactosyl_queuosine AS
>   SELECT
>     feature_id AS galactosyl_queuosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'galactosyl_queuosine';
> 
> --- ************************************************
> --- *** relation: mannosyl_queuosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Mannosyl_queuosine is a modified 7-deazo ***
> --- *** guanosine.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW mannosyl_queuosine AS
>   SELECT
>     feature_id AS mannosyl_queuosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mannosyl_queuosine';
> 
> --- ************************************************
> --- *** relation: seven_cyano_seven_deazaguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 7_cyano_7_deazaguanosine is a modified 7 ***
> --- *** -deazoguanosine.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW seven_cyano_seven_deazaguanosine AS
>   SELECT
>     feature_id AS seven_cyano_seven_deazaguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'seven_cyano_seven_deazaguanosine';
> 
> --- ************************************************
> --- *** relation: seven_aminomethyl_seven_deazaguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 7_aminomethyl_7_deazaguanosine is a modi ***
> --- *** fied 7-deazoguanosine.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW seven_aminomethyl_seven_deazaguanosine AS
>   SELECT
>     feature_id AS seven_aminomethyl_seven_deazaguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'seven_aminomethyl_seven_deazaguanosine';
> 
> --- ************************************************
> --- *** relation: archaeosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Archaeosine is a modified 7-deazoguanosi ***
> --- *** ne.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW archaeosine AS
>   SELECT
>     feature_id AS archaeosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'archaeosine';
> 
> --- ************************************************
> --- *** relation: one_methylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 1_methylguanosine is a modified guanosin ***
> --- *** e base feature.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW one_methylguanosine AS
>   SELECT
>     feature_id AS one_methylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'one_methylguanosine';
> 
> --- ************************************************
> --- *** relation: n2_methylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N2_methylguanosine is a modified guanosi ***
> --- *** ne base feature.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW n2_methylguanosine AS
>   SELECT
>     feature_id AS n2_methylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N2_methylguanosine';
> 
> --- ************************************************
> --- *** relation: seven_methylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 7_methylguanosine is a modified guanosin ***
> --- *** e base feature.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW seven_methylguanosine AS
>   SELECT
>     feature_id AS seven_methylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'seven_methylguanosine';
> 
> --- ************************************************
> --- *** relation: two_prime_o_methylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2prime_O_methylguanosine is a modified g ***
> --- *** uanosine base feature.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_prime_o_methylguanosine AS
>   SELECT
>     feature_id AS two_prime_o_methylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_prime_O_methylguanosine';
> 
> --- ************************************************
> --- *** relation: n2_n2_dimethylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N2_N2_dimethylguanosine is a modified gu ***
> --- *** anosine base feature.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW n2_n2_dimethylguanosine AS
>   SELECT
>     feature_id AS n2_n2_dimethylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N2_N2_dimethylguanosine';
> 
> --- ************************************************
> --- *** relation: n2_2_prime_o_dimethylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N2_2prime_O_dimethylguanosine is a modif ***
> --- *** ied guanosine base feature.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW n2_2_prime_o_dimethylguanosine AS
>   SELECT
>     feature_id AS n2_2_prime_o_dimethylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N2_2_prime_O_dimethylguanosine';
> 
> --- ************************************************
> --- *** relation: n2_n2_2_prime_o_trimethylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N2_N2_2prime_O_trimethylguanosine is a m ***
> --- *** odified guanosine base feature.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW n2_n2_2_prime_o_trimethylguanosine AS
>   SELECT
>     feature_id AS n2_n2_2_prime_o_trimethylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N2_N2_2_prime_O_trimethylguanosine';
> 
> --- ************************************************
> --- *** relation: two_prime_o_ribosylguanosine_phosphate ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2prime_O_ribosylguanosine_phosphate is a ***
> --- ***  modified guanosine base feature.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_prime_o_ribosylguanosine_phosphate AS
>   SELECT
>     feature_id AS two_prime_o_ribosylguanosine_phosphate_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_prime_O_ribosylguanosine_phosphate';
> 
> --- ************************************************
> --- *** relation: wybutosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Wybutosine is a modified guanosine base  ***
> --- *** feature.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW wybutosine AS
>   SELECT
>     feature_id AS wybutosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'wybutosine';
> 
> --- ************************************************
> --- *** relation: peroxywybutosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Peroxywybutosine is a modified guanosine ***
> --- ***  base feature.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW peroxywybutosine AS
>   SELECT
>     feature_id AS peroxywybutosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'peroxywybutosine';
> 
> --- ************************************************
> --- *** relation: hydroxywybutosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Hydroxywybutosine is a modified guanosin ***
> --- *** e base feature.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW hydroxywybutosine AS
>   SELECT
>     feature_id AS hydroxywybutosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'hydroxywybutosine';
> 
> --- ************************************************
> --- *** relation: undermodified_hydroxywybutosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Undermodified_hydroxywybutosine is a mod ***
> --- *** ified guanosine base feature.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW undermodified_hydroxywybutosine AS
>   SELECT
>     feature_id AS undermodified_hydroxywybutosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'undermodified_hydroxywybutosine';
> 
> --- ************************************************
> --- *** relation: wyosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Wyosine is a modified guanosine base fea ***
> --- *** ture.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW wyosine AS
>   SELECT
>     feature_id AS wyosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'wyosine';
> 
> --- ************************************************
> --- *** relation: methylwyosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Methylwyosine is a modified guanosine ba ***
> --- *** se feature.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW methylwyosine AS
>   SELECT
>     feature_id AS methylwyosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylwyosine';
> 
> --- ************************************************
> --- *** relation: n2_7_dimethylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N2_7_dimethylguanosine is a modified gua ***
> --- *** nosine base feature.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW n2_7_dimethylguanosine AS
>   SELECT
>     feature_id AS n2_7_dimethylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N2_7_dimethylguanosine';
> 
> --- ************************************************
> --- *** relation: n2_n2_7_trimethylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N2_N2_7_trimethylguanosine is a modified ***
> --- ***  guanosine base feature.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW n2_n2_7_trimethylguanosine AS
>   SELECT
>     feature_id AS n2_n2_7_trimethylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N2_N2_7_trimethylguanosine';
> 
> --- ************************************************
> --- *** relation: one_two_prime_o_dimethylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 1_2prime_O_dimethylguanosine is a modifi ***
> --- *** ed guanosine base feature.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW one_two_prime_o_dimethylguanosine AS
>   SELECT
>     feature_id AS one_two_prime_o_dimethylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'one_two_prime_O_dimethylguanosine';
> 
> --- ************************************************
> --- *** relation: four_demethylwyosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 4_demethylwyosine is a modified guanosin ***
> --- *** e base feature.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW four_demethylwyosine AS
>   SELECT
>     feature_id AS four_demethylwyosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'four_demethylwyosine';
> 
> --- ************************************************
> --- *** relation: isowyosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Isowyosine is a modified guanosine base  ***
> --- *** feature.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW isowyosine AS
>   SELECT
>     feature_id AS isowyosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'isowyosine';
> 
> --- ************************************************
> --- *** relation: n2_7_2prirme_o_trimethylguanosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** N2_7_2prirme_O_trimethylguanosine is a m ***
> --- *** odified guanosine base feature.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW n2_7_2prirme_o_trimethylguanosine AS
>   SELECT
>     feature_id AS n2_7_2prirme_o_trimethylguanosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'N2_7_2prirme_O_trimethylguanosine';
> 
> --- ************************************************
> --- *** relation: five_methyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_methyluridine is a modified uridine ba ***
> --- *** se feature.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_methyluridine AS
>   SELECT
>     feature_id AS five_methyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methyluridine';
> 
> --- ************************************************
> --- *** relation: two_prime_o_methyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2prime_O_methyluridine is a modified uri ***
> --- *** dine base feature.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_prime_o_methyluridine AS
>   SELECT
>     feature_id AS two_prime_o_methyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_prime_O_methyluridine';
> 
> --- ************************************************
> --- *** relation: five_two_prime_o_dimethyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_2_prime_O_dimethyluridine is a modifie ***
> --- *** d uridine base feature.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_two_prime_o_dimethyluridine AS
>   SELECT
>     feature_id AS five_two_prime_o_dimethyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_two_prime_O_dimethyluridine';
> 
> --- ************************************************
> --- *** relation: one_methylpseudouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 1_methylpseudouridine is a modified urid ***
> --- *** ine base feature.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW one_methylpseudouridine AS
>   SELECT
>     feature_id AS one_methylpseudouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'one_methylpseudouridine';
> 
> --- ************************************************
> --- *** relation: two_prime_o_methylpseudouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2prime_O_methylpseudouridine is a modifi ***
> --- *** ed uridine base feature.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_prime_o_methylpseudouridine AS
>   SELECT
>     feature_id AS two_prime_o_methylpseudouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_prime_O_methylpseudouridine';
> 
> --- ************************************************
> --- *** relation: two_thiouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2_thiouridine is a modified uridine base ***
> --- ***  feature.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_thiouridine AS
>   SELECT
>     feature_id AS two_thiouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_thiouridine';
> 
> --- ************************************************
> --- *** relation: four_thiouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 4_thiouridine is a modified uridine base ***
> --- ***  feature.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW four_thiouridine AS
>   SELECT
>     feature_id AS four_thiouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'four_thiouridine';
> 
> --- ************************************************
> --- *** relation: five_methyl_2_thiouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_methyl_2_thiouridine is a modified uri ***
> --- *** dine base feature.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_methyl_2_thiouridine AS
>   SELECT
>     feature_id AS five_methyl_2_thiouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methyl_2_thiouridine';
> 
> --- ************************************************
> --- *** relation: two_thio_two_prime_o_methyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 2_thio_2prime_O_methyluridine is a modif ***
> --- *** ied uridine base feature.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW two_thio_two_prime_o_methyluridine AS
>   SELECT
>     feature_id AS two_thio_two_prime_o_methyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'two_thio_two_prime_O_methyluridine';
> 
> --- ************************************************
> --- *** relation: three_three_amino_three_carboxypropyl_uridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 3_3_amino_3_carboxypropyl_uridine is a m ***
> --- *** odified uridine base feature.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_three_amino_three_carboxypropyl_uridine AS
>   SELECT
>     feature_id AS three_three_amino_three_carboxypropyl_uridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_three_amino_three_carboxypropyl_uridine';
> 
> --- ************************************************
> --- *** relation: five_hydroxyuridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_hydroxyuridine is a modified uridine b ***
> --- *** ase feature.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_hydroxyuridine AS
>   SELECT
>     feature_id AS five_hydroxyuridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_hydroxyuridine';
> 
> --- ************************************************
> --- *** relation: five_methoxyuridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_methoxyuridine is a modified uridine b ***
> --- *** ase feature.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_methoxyuridine AS
>   SELECT
>     feature_id AS five_methoxyuridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methoxyuridine';
> 
> --- ************************************************
> --- *** relation: uridine_five_oxyacetic_acid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Uridine_5_oxyacetic_acid is a modified u ***
> --- *** ridine base feature.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW uridine_five_oxyacetic_acid AS
>   SELECT
>     feature_id AS uridine_five_oxyacetic_acid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'uridine_five_oxyacetic_acid';
> 
> --- ************************************************
> --- *** relation: uridine_five_oxyacetic_acid_methyl_ester ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Uridine_5_oxyacetic_acid_methyl_ester is ***
> --- ***  a modified uridine base feature.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW uridine_five_oxyacetic_acid_methyl_ester AS
>   SELECT
>     feature_id AS uridine_five_oxyacetic_acid_methyl_ester_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'uridine_five_oxyacetic_acid_methyl_ester';
> 
> --- ************************************************
> --- *** relation: five_carboxyhydroxymethyl_uridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_carboxyhydroxymethyl_uridine is a modi ***
> --- *** fied uridine base feature.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_carboxyhydroxymethyl_uridine AS
>   SELECT
>     feature_id AS five_carboxyhydroxymethyl_uridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_carboxyhydroxymethyl_uridine';
> 
> --- ************************************************
> --- *** relation: five_carboxyhydroxymethyl_uridine_methyl_ester ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_carboxyhydroxymethyl_uridine_methyl_es ***
> --- *** ter is a modified uridine base feature.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_carboxyhydroxymethyl_uridine_methyl_ester AS
>   SELECT
>     feature_id AS five_carboxyhydroxymethyl_uridine_methyl_ester_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_carboxyhydroxymethyl_uridine_methyl_ester';
> 
> --- ************************************************
> --- *** relation: five_methoxycarbonylmethyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Five_methoxycarbonylmethyluridine is a m ***
> --- *** odified uridine base feature.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_methoxycarbonylmethyluridine AS
>   SELECT
>     feature_id AS five_methoxycarbonylmethyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methoxycarbonylmethyluridine';
> 
> --- ************************************************
> --- *** relation: five_methoxycarbonylmethyl_two_prime_o_methyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Five_methoxycarbonylmethyl_2_prime_O_met ***
> --- *** hyluridine is a modified uridine base fe ***
> --- *** ature.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_methoxycarbonylmethyl_two_prime_o_methyluridine AS
>   SELECT
>     feature_id AS five_methoxycarbonylmethyl_two_prime_o_methyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methoxycarbonylmethyl_two_prime_O_methyluridine';
> 
> --- ************************************************
> --- *** relation: five_mcm_2_thiouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_methoxycarbonylmethyl_2_thiouridine is ***
> --- ***  a modified uridine base feature.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_mcm_2_thiouridine AS
>   SELECT
>     feature_id AS five_mcm_2_thiouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methoxycarbonylmethyl_two_thiouridine';
> 
> --- ************************************************
> --- *** relation: five_aminomethyl_two_thiouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_aminomethyl_2_thiouridine is a modifie ***
> --- *** d uridine base feature.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_aminomethyl_two_thiouridine AS
>   SELECT
>     feature_id AS five_aminomethyl_two_thiouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_aminomethyl_two_thiouridine';
> 
> --- ************************************************
> --- *** relation: five_methylaminomethyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_methylaminomethyluridine is a modified ***
> --- ***  uridine base feature.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_methylaminomethyluridine AS
>   SELECT
>     feature_id AS five_methylaminomethyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methylaminomethyluridine';
> 
> --- ************************************************
> --- *** relation: five_mam_2_thiouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_methylaminomethyl_2_thiouridine is a m ***
> --- *** odified uridine base feature.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_mam_2_thiouridine AS
>   SELECT
>     feature_id AS five_mam_2_thiouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methylaminomethyl_two_thiouridine';
> 
> --- ************************************************
> --- *** relation: five_methylaminomethyl_two_selenouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_methylaminomethyl_2_selenouridine is a ***
> --- ***  modified uridine base feature.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_methylaminomethyl_two_selenouridine AS
>   SELECT
>     feature_id AS five_methylaminomethyl_two_selenouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methylaminomethyl_two_selenouridine';
> 
> --- ************************************************
> --- *** relation: five_carbamoylmethyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_carbamoylmethyluridine is a modified u ***
> --- *** ridine base feature.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_carbamoylmethyluridine AS
>   SELECT
>     feature_id AS five_carbamoylmethyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_carbamoylmethyluridine';
> 
> --- ************************************************
> --- *** relation: five_cm_2_prime_o_methU ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_carbamoylmethyl_2_prime_O_methyluridin ***
> --- *** e is a modified uridine base feature.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_cm_2_prime_o_methU AS
>   SELECT
>     feature_id AS five_cm_2_prime_o_methU_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_carbamoylmethyl_two_prime_O_methyluridine';
> 
> --- ************************************************
> --- *** relation: five_carboxymethylaminomethyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_carboxymethylaminomethyluridine is a m ***
> --- *** odified uridine base feature.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_carboxymethylaminomethyluridine AS
>   SELECT
>     feature_id AS five_carboxymethylaminomethyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_carboxymethylaminomethyluridine';
> 
> --- ************************************************
> --- *** relation: five_carboxymethylaminomethyl_two_prime_o_methyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_carboxymethylaminomethyl_2_prime_O_met ***
> --- *** hyluridine is a modified uridine base fe ***
> --- *** ature.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_carboxymethylaminomethyl_two_prime_o_methyluridine AS
>   SELECT
>     feature_id AS five_carboxymethylaminomethyl_two_prime_o_methyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_carboxymethylaminomethyl_two_prime_O_methyluridine';
> 
> --- ************************************************
> --- *** relation: five_carboxymethylaminomethyl_two_thiouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_carboxymethylaminomethyl_2_thiouridine ***
> --- ***  is a modified uridine base feature.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_carboxymethylaminomethyl_two_thiouridine AS
>   SELECT
>     feature_id AS five_carboxymethylaminomethyl_two_thiouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_carboxymethylaminomethyl_two_thiouridine';
> 
> --- ************************************************
> --- *** relation: three_methyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 3_methyluridine is a modified uridine ba ***
> --- *** se feature.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_methyluridine AS
>   SELECT
>     feature_id AS three_methyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_methyluridine';
> 
> --- ************************************************
> --- *** relation: one_methyl_3_3_amino_three_carboxypropyl_pseudouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 1_methyl_3_3_amino_3_carboxypropyl_pseud ***
> --- *** ouridine is a modified uridine base feat ***
> --- *** ure.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW one_methyl_3_3_amino_three_carboxypropyl_pseudouridine AS
>   SELECT
>     feature_id AS one_methyl_3_3_amino_three_carboxypropyl_pseudouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'one_methyl_three_three_amino_three_carboxypropyl_pseudouridine';
> 
> --- ************************************************
> --- *** relation: five_carboxymethyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_carboxymethyluridine is a modified uri ***
> --- *** dine base feature.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_carboxymethyluridine AS
>   SELECT
>     feature_id AS five_carboxymethyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_carboxymethyluridine';
> 
> --- ************************************************
> --- *** relation: three_two_prime_o_dimethyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 3_2prime_O_dimethyluridine is a modified ***
> --- ***  uridine base feature.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_two_prime_o_dimethyluridine AS
>   SELECT
>     feature_id AS three_two_prime_o_dimethyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_two_prime_O_dimethyluridine';
> 
> --- ************************************************
> --- *** relation: five_methyldihydrouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_methyldihydrouridine is a modified uri ***
> --- *** dine base feature.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_methyldihydrouridine AS
>   SELECT
>     feature_id AS five_methyldihydrouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_methyldihydrouridine';
> 
> --- ************************************************
> --- *** relation: three_methylpseudouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 3_methylpseudouridine is a modified urid ***
> --- *** ine base feature.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_methylpseudouridine AS
>   SELECT
>     feature_id AS three_methylpseudouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_methylpseudouridine';
> 
> --- ************************************************
> --- *** relation: five_taurinomethyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_taurinomethyluridine is a modified uri ***
> --- *** dine base feature.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_taurinomethyluridine AS
>   SELECT
>     feature_id AS five_taurinomethyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_taurinomethyluridine';
> 
> --- ************************************************
> --- *** relation: five_taurinomethyl_two_thiouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_taurinomethyl_2_thiouridineis a modifi ***
> --- *** ed uridine base feature.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_taurinomethyl_two_thiouridine AS
>   SELECT
>     feature_id AS five_taurinomethyl_two_thiouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_taurinomethyl_two_thiouridine';
> 
> --- ************************************************
> --- *** relation: five_isopentenylaminomethyl_uridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_isopentenylaminomethyl_uridine is a mo ***
> --- *** dified uridine base feature.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_isopentenylaminomethyl_uridine AS
>   SELECT
>     feature_id AS five_isopentenylaminomethyl_uridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_isopentenylaminomethyl_uridine';
> 
> --- ************************************************
> --- *** relation: five_isopentenylaminomethyl_two_thiouridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_isopentenylaminomethyl_2_thiouridine i ***
> --- *** s a modified uridine base feature.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_isopentenylaminomethyl_two_thiouridine AS
>   SELECT
>     feature_id AS five_isopentenylaminomethyl_two_thiouridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_isopentenylaminomethyl_two_thiouridine';
> 
> --- ************************************************
> --- *** relation: five_isopentenylaminomethyl_two_prime_o_methyluridine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** 5_isopentenylaminomethyl_2prime_O_methyl ***
> --- *** uridine is a modified uridine base featu ***
> --- *** re.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_isopentenylaminomethyl_two_prime_o_methyluridine AS
>   SELECT
>     feature_id AS five_isopentenylaminomethyl_two_prime_o_methyluridine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_isopentenylaminomethyl_two_prime_O_methyluridine';
> 
> --- ************************************************
> --- *** relation: histone_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a DNA molecule that is bound ***
> --- ***  by a histone.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW histone_binding_site AS
>   SELECT
>     feature_id AS histone_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'histone_binding_site';
> 
> --- ************************************************
> --- *** relation: cds_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW cds_fragment AS
>   SELECT
>     feature_id AS cds_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CDS_fragment';
> 
> --- ************************************************
> --- *** relation: modified_amino_acid_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified amino ac ***
> --- *** id feature.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_amino_acid_feature AS
>   SELECT
>     feature_id AS modified_amino_acid_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_glycine' OR cvterm.name = 'modified_L_alanine' OR cvterm.name = 'modified_L_asparagine' OR cvterm.name = 'modified_L_aspartic_acid' OR cvterm.name = 'modified_L_cysteine' OR cvterm.name = 'modified_L_glutamic_acid' OR cvterm.name = 'modified_L_threonine' OR cvterm.name = 'modified_L_tryptophan' OR cvterm.name = 'modified_L_glutamine' OR cvterm.name = 'modified_L_methionine' OR cvterm.name = 'modified_L_isoleucine' OR cvterm.name = 'modified_L_phenylalanine' OR cvterm.name = 'modified_L_histidine' OR cvterm.name = 'modified_L_serine' OR cvterm.name = 'modified_L_lysine' OR cvterm.name = 'modified_L_leucine' OR cvterm.name = 'modified_L_selenocysteine' OR cvterm.name = 'modified_L_valine' OR cvterm.name = 'modified_L_proline' OR cvterm.name = 'modified_L_tyrosine' OR cvterm.name = 'modified_L_arginine' OR cvterm.name = 'modified_amino_acid_feature';
> 
> --- ************************************************
> --- *** relation: modified_glycine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified glycine  ***
> --- *** amino acid feature.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_glycine AS
>   SELECT
>     feature_id AS modified_glycine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_glycine';
> 
> --- ************************************************
> --- *** relation: modified_l_alanine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified alanine  ***
> --- *** amino acid feature.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_alanine AS
>   SELECT
>     feature_id AS modified_l_alanine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_alanine';
> 
> --- ************************************************
> --- *** relation: modified_l_asparagine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified asparagi ***
> --- *** ne amino acid feature.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_asparagine AS
>   SELECT
>     feature_id AS modified_l_asparagine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_asparagine';
> 
> --- ************************************************
> --- *** relation: modified_l_aspartic_acid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified aspartic ***
> --- ***  acid amino acid feature.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_aspartic_acid AS
>   SELECT
>     feature_id AS modified_l_aspartic_acid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_aspartic_acid';
> 
> --- ************************************************
> --- *** relation: modified_l_cysteine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified cysteine ***
> --- ***  amino acid feature.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_cysteine AS
>   SELECT
>     feature_id AS modified_l_cysteine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_cysteine';
> 
> --- ************************************************
> --- *** relation: modified_l_glutamic_acid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_glutamic_acid AS
>   SELECT
>     feature_id AS modified_l_glutamic_acid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_glutamic_acid';
> 
> --- ************************************************
> --- *** relation: modified_l_threonine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified threonin ***
> --- *** e amino acid feature.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_threonine AS
>   SELECT
>     feature_id AS modified_l_threonine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_threonine';
> 
> --- ************************************************
> --- *** relation: modified_l_tryptophan ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified tryptoph ***
> --- *** an amino acid feature.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_tryptophan AS
>   SELECT
>     feature_id AS modified_l_tryptophan_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_tryptophan';
> 
> --- ************************************************
> --- *** relation: modified_l_glutamine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified glutamin ***
> --- *** e amino acid feature.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_glutamine AS
>   SELECT
>     feature_id AS modified_l_glutamine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_glutamine';
> 
> --- ************************************************
> --- *** relation: modified_l_methionine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified methioni ***
> --- *** ne amino acid feature.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_methionine AS
>   SELECT
>     feature_id AS modified_l_methionine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_methionine';
> 
> --- ************************************************
> --- *** relation: modified_l_isoleucine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified isoleuci ***
> --- *** ne amino acid feature.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_isoleucine AS
>   SELECT
>     feature_id AS modified_l_isoleucine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_isoleucine';
> 
> --- ************************************************
> --- *** relation: modified_l_phenylalanine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified phenylal ***
> --- *** anine amino acid feature.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_phenylalanine AS
>   SELECT
>     feature_id AS modified_l_phenylalanine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_phenylalanine';
> 
> --- ************************************************
> --- *** relation: modified_l_histidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified histidie ***
> --- ***  amino acid feature.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_histidine AS
>   SELECT
>     feature_id AS modified_l_histidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_histidine';
> 
> --- ************************************************
> --- *** relation: modified_l_serine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified serine a ***
> --- *** mino acid feature.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_serine AS
>   SELECT
>     feature_id AS modified_l_serine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_serine';
> 
> --- ************************************************
> --- *** relation: modified_l_lysine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified lysine a ***
> --- *** mino acid feature.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_lysine AS
>   SELECT
>     feature_id AS modified_l_lysine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_lysine';
> 
> --- ************************************************
> --- *** relation: modified_l_leucine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified leucine  ***
> --- *** amino acid feature.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_leucine AS
>   SELECT
>     feature_id AS modified_l_leucine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_leucine';
> 
> --- ************************************************
> --- *** relation: modified_l_selenocysteine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified selenocy ***
> --- *** steine amino acid feature.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_selenocysteine AS
>   SELECT
>     feature_id AS modified_l_selenocysteine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_selenocysteine';
> 
> --- ************************************************
> --- *** relation: modified_l_valine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified valine a ***
> --- *** mino acid feature.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_valine AS
>   SELECT
>     feature_id AS modified_l_valine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_valine';
> 
> --- ************************************************
> --- *** relation: modified_l_proline ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified proline  ***
> --- *** amino acid feature.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_proline AS
>   SELECT
>     feature_id AS modified_l_proline_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_proline';
> 
> --- ************************************************
> --- *** relation: modified_l_tyrosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified tyrosine ***
> --- ***  amino acid feature.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_tyrosine AS
>   SELECT
>     feature_id AS modified_l_tyrosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_tyrosine';
> 
> --- ************************************************
> --- *** relation: modified_l_arginine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A post translationally modified arginine ***
> --- ***  amino acid feature.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW modified_l_arginine AS
>   SELECT
>     feature_id AS modified_l_arginine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'modified_L_arginine';
> 
> --- ************************************************
> --- *** relation: peptidyl ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing the nature of a  ***
> --- *** proteinaceous polymer, where by the amin ***
> --- *** o acid units are joined by peptide bonds ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW peptidyl AS
>   SELECT
>     feature_id AS peptidyl_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'peptidyl';
> 
> --- ************************************************
> --- *** relation: cleaved_for_gpi_anchor_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The C-terminal residues of a polypeptide ***
> --- ***  which are exchanged for a GPI-anchor.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW cleaved_for_gpi_anchor_region AS
>   SELECT
>     feature_id AS cleaved_for_gpi_anchor_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cleaved_for_gpi_anchor_region';
> 
> --- ************************************************
> --- *** relation: biomaterial_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region which is intended for use in an ***
> --- ***  experiment.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW biomaterial_region AS
>   SELECT
>     feature_id AS biomaterial_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'reagent' OR cvterm.name = 'engineered_region' OR cvterm.name = 'PCR_product' OR cvterm.name = 'clone' OR cvterm.name = 'rescue_region' OR cvterm.name = 'oligo' OR cvterm.name = 'clone_insert' OR cvterm.name = 'cloned_region' OR cvterm.name = 'databank_entry' OR cvterm.name = 'RAPD' OR cvterm.name = 'genomic_clone' OR cvterm.name = 'cDNA_clone' OR cvterm.name = 'tiling_path_clone' OR cvterm.name = 'validated_cDNA_clone' OR cvterm.name = 'invalidated_cDNA_clone' OR cvterm.name = 'three_prime_RACE_clone' OR cvterm.name = 'chimeric_cDNA_clone' OR cvterm.name = 'genomically_contaminated_cDNA_clone' OR cvterm.name = 'polyA_primed_cDNA_clone' OR cvterm.name = 'partially_processed_cDNA_clone' OR cvterm.name = 'engineered_rescue_region' OR cvterm.name = 'aptamer' OR cvterm.name = 'probe' OR cvterm.name = 'tag' OR cvterm.name = 'ss_oligo' OR cvterm.name = 'ds_oligo' OR cvterm.name = 'DNAzyme' OR cvterm.name = 'synthetic_oligo' OR cvterm.name = 'DNA_aptamer' OR cvterm.name = 'RNA_aptamer' OR cvterm.name = 'microarray_oligo' OR cvterm.name = 'SAGE_tag' OR cvterm.name = 'STS' OR cvterm.name = 'EST' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'five_prime_EST' OR cvterm.name = 'three_prime_EST' OR cvterm.name = 'UST' OR cvterm.name = 'RST' OR cvterm.name = 'three_prime_UST' OR cvterm.name = 'five_prime_UST' OR cvterm.name = 'three_prime_RST' OR cvterm.name = 'five_prime_RST' OR cvterm.name = 'primer' OR cvterm.name = 'sequencing_primer' OR cvterm.name = 'forward_primer' OR cvterm.name = 'reverse_primer' OR cvterm.name = 'RNAi_reagent' OR cvterm.name = 'DNA_constraint_sequence' OR cvterm.name = 'morpholino_oligo' OR cvterm.name = 'PNA_oligo' OR cvterm.name = 'LNA_oligo' OR cvterm.name = 'TNA_oligo' OR cvterm.name = 'GNA_oligo' OR cvterm.name = 'R_GNA_oligo' OR cvterm.name = 'S_GNA_oligo' OR cvterm.name = 'cloned_cDNA_insert' OR cvterm.name = 'cloned_genomic_insert' OR cvterm.name = 'engineered_insert' OR cvterm.name = 'BAC_cloned_genomic_insert' OR cvterm.name = 'engineered_gene' OR cvterm.name = 'engineered_plasmid' OR cvterm.name = 'engineered_rescue_region' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'engineered_foreign_region' OR cvterm.name = 'engineered_tag' OR cvterm.name = 'engineered_insert' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_repetitive_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'biomaterial_region';
> 
> --- ************************************************
> --- *** relation: experimental_feature ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region which is the result of some arb ***
> --- *** itrary experimental procedure. The proce ***
> --- *** dure may be carried out with biological  ***
> --- *** material or inside a computer.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW experimental_feature AS
>   SELECT
>     feature_id AS experimental_feature_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'match_part' OR cvterm.name = 'assembly_component' OR cvterm.name = 'conserved_region' OR cvterm.name = 'match' OR cvterm.name = 'remark' OR cvterm.name = 'reading_frame' OR cvterm.name = 'QTL' OR cvterm.name = 'consensus_region' OR cvterm.name = 'low_complexity_region' OR cvterm.name = 'assembly' OR cvterm.name = 'transcribed_fragment' OR cvterm.name = 'transcribed_cluster' OR cvterm.name = 'read_pair' OR cvterm.name = 'contig' OR cvterm.name = 'read' OR cvterm.name = 'restriction_fragment' OR cvterm.name = 'golden_path_fragment' OR cvterm.name = 'tiling_path_fragment' OR cvterm.name = 'gap' OR cvterm.name = 'sonicate_fragment' OR cvterm.name = 'contig_read' OR cvterm.name = 'BAC_end' OR cvterm.name = 'dye_terminator_read' OR cvterm.name = 'pyrosequenced_read' OR cvterm.name = 'ligation_based_read' OR cvterm.name = 'polymerase_synthesis_read' OR cvterm.name = 'PAC_end' OR cvterm.name = 'RFLP_fragment' OR cvterm.name = 'tiling_path_clone' OR cvterm.name = 'coding_conserved_region' OR cvterm.name = 'nc_conserved_region' OR cvterm.name = 'homologous_region' OR cvterm.name = 'syntenic_region' OR cvterm.name = 'paralogous_region' OR cvterm.name = 'orthologous_region' OR cvterm.name = 'nucleotide_match' OR cvterm.name = 'protein_match' OR cvterm.name = 'expressed_sequence_match' OR cvterm.name = 'cross_genome_match' OR cvterm.name = 'translated_nucleotide_match' OR cvterm.name = 'primer_match' OR cvterm.name = 'EST_match' OR cvterm.name = 'cDNA_match' OR cvterm.name = 'UST_match' OR cvterm.name = 'RST_match' OR cvterm.name = 'sequence_difference' OR cvterm.name = 'experimental_result_region' OR cvterm.name = 'polypeptide_sequencing_information' OR cvterm.name = 'possible_base_call_error' OR cvterm.name = 'possible_assembly_error' OR cvterm.name = 'overlapping_feature_set' OR cvterm.name = 'no_output' OR cvterm.name = 'overlapping_EST_set' OR cvterm.name = 'non_adjacent_residues' OR cvterm.name = 'non_terminal_residue' OR cvterm.name = 'sequence_conflict' OR cvterm.name = 'sequence_uncertainty' OR cvterm.name = 'ORF' OR cvterm.name = 'blocked_reading_frame' OR cvterm.name = 'mini_gene' OR cvterm.name = 'rescue_mini_gene' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'sequence_assembly' OR cvterm.name = 'fragment_assembly' OR cvterm.name = 'supercontig' OR cvterm.name = 'contig' OR cvterm.name = 'tiling_path' OR cvterm.name = 'virtual_sequence' OR cvterm.name = 'golden_path' OR cvterm.name = 'ultracontig' OR cvterm.name = 'expressed_sequence_assembly' OR cvterm.name = 'fingerprint_map' OR cvterm.name = 'STS_map' OR cvterm.name = 'RH_map' OR cvterm.name = 'unigene_cluster' OR cvterm.name = 'experimental_feature';
> 
> --- ************************************************
> --- *** relation: biological_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region defined by its disposition to b ***
> --- *** e involved in a biological process.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW biological_region AS
>   SELECT
>     feature_id AS biological_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_secondary_structure' OR cvterm.name = 'linkage_group' OR cvterm.name = 'polypeptide' OR cvterm.name = 'deletion' OR cvterm.name = 'origin_of_replication' OR cvterm.name = 'recombination_feature' OR cvterm.name = 'CpG_island' OR cvterm.name = 'binding_site' OR cvterm.name = 'pseudogenic_region' OR cvterm.name = 'cap' OR cvterm.name = 'intergenic_region' OR cvterm.name = 'oligo_U_tail' OR cvterm.name = 'polyA_sequence' OR cvterm.name = 'insertion' OR cvterm.name = 'gene' OR cvterm.name = 'nucleotide_motif' OR cvterm.name = 'chromosome_part' OR cvterm.name = 'gene_member_region' OR cvterm.name = 'transcript_region' OR cvterm.name = 'polypeptide_region' OR cvterm.name = 'gene_component_region' OR cvterm.name = 'mobile_genetic_element' OR cvterm.name = 'replicon' OR cvterm.name = 'base' OR cvterm.name = 'amino_acid' OR cvterm.name = 'gene_group' OR cvterm.name = 'substitution' OR cvterm.name = 'inversion' OR cvterm.name = 'retron' OR cvterm.name = 'G_quartet' OR cvterm.name = 'base_pair' OR cvterm.name = 'RNA_sequence_secondary_structure' OR cvterm.name = 'DNA_sequence_secondary_structure' OR cvterm.name = 'pseudoknot' OR cvterm.name = 'WC_base_pair' OR cvterm.name = 'sugar_edge_base_pair' OR cvterm.name = 'Hoogsteen_base_pair' OR cvterm.name = 'reverse_Hoogsteen_base_pair' OR cvterm.name = 'wobble_base_pair' OR cvterm.name = 'stem_loop' OR cvterm.name = 'tetraloop' OR cvterm.name = 'i_motif' OR cvterm.name = 'recoding_pseudoknot' OR cvterm.name = 'H_pseudoknot' OR cvterm.name = 'D_loop' OR cvterm.name = 'ARS' OR cvterm.name = 'oriT' OR cvterm.name = 'amplification_origin' OR cvterm.name = 'oriV' OR cvterm.name = 'oriC' OR cvterm.name = 'recombination_hotspot' OR cvterm.name = 'haplotype_block' OR cvterm.name = 'sequence_rearrangement_feature' OR cvterm.name = 'iDNA' OR cvterm.name = 'specific_recombination_site' OR cvterm.name = 'chromosome_breakage_sequence' OR cvterm.name = 'internal_eliminated_sequence' OR cvterm.name = 'macronucleus_destined_segment' OR cvterm.name = 'recombination_feature_of_rearranged_gene' OR cvterm.name = 'site_specific_recombination_target_region' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_feature' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_spacer' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment' OR cvterm.name = 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster' OR cvterm.name = 'vertebrate_immune_system_gene_recombination_signal_feature' OR cvterm.name = 'D_gene' OR cvterm.name = 'V_gene' OR cvterm.name = 'J_gene' OR cvterm.name = 'C_gene' OR cvterm.name = 'D_J_C_cluster' OR cvterm.name = 'J_C_cluster' OR cvterm.name = 'J_cluster' OR cvterm.name = 'V_cluster' OR cvterm.name = 'V_J_cluster' OR cvterm.name = 'V_J_C_cluster' OR cvterm.name = 'C_cluster' OR cvterm.name = 'D_cluster' OR cvterm.name = 'D_J_cluster' OR cvterm.name = 'three_prime_D_spacer' OR cvterm.name = 'five_prime_D_spacer' OR cvterm.name = 'J_spacer' OR cvterm.name = 'V_spacer' OR cvterm.name = 'VD_gene' OR cvterm.name = 'DJ_gene' OR cvterm.name = 'VDJ_gene' OR cvterm.name = 'VJ_gene' OR cvterm.name = 'DJ_J_cluster' OR cvterm.name = 'VDJ_J_C_cluster' OR cvterm.name = 'VDJ_J_cluster' OR cvterm.name = 'VJ_C_cluster' OR cvterm.name = 'VJ_J_C_cluster' OR cvterm.name = 'VJ_J_cluster' OR cvterm.name = 'D_DJ_C_cluster' OR cvterm.name = 'D_DJ_cluster' OR cvterm.name = 'D_DJ_J_C_cluster' OR cvterm.name = 'D_DJ_J_cluster' OR cvterm.name = 'V_DJ_cluster' OR cvterm.name = 'V_DJ_J_cluster' OR cvterm.name = 'V_VDJ_C_cluster' OR cvterm.name = 'V_VDJ_cluster' OR cvterm.name = 'V_VDJ_J_cluster' OR cvterm.name = 'V_VJ_C_cluster' OR cvterm.name = 'V_VJ_cluster' OR cvterm.name = 'V_VJ_J_cluster' OR cvterm.name = 'V_D_DJ_C_cluster' OR cvterm.name = 'V_D_DJ_cluster' OR cvterm.name = 'V_D_DJ_J_C_cluster' OR cvterm.name = 'V_D_DJ_J_cluster' OR cvterm.name = 'V_D_J_C_cluster' OR cvterm.name = 'V_D_J_cluster' OR cvterm.name = 'DJ_C_cluster' OR cvterm.name = 'DJ_J_C_cluster' OR cvterm.name = 'VDJ_C_cluster' OR cvterm.name = 'V_DJ_C_cluster' OR cvterm.name = 'V_DJ_J_C_cluster' OR cvterm.name = 'V_VDJ_J_C_cluster' OR cvterm.name = 'V_VJ_J_C_cluster' OR cvterm.name = 'J_gene_recombination_feature' OR cvterm.name = 'D_gene_recombination_feature' OR cvterm.name = 'V_gene_recombination_feature' OR cvterm.name = 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene' OR cvterm.name = 'five_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_recombination_signal_sequence' OR cvterm.name = 'three_prime_D_heptamer' OR cvterm.name = 'five_prime_D_heptamer' OR cvterm.name = 'J_heptamer' OR cvterm.name = 'V_heptamer' OR cvterm.name = 'three_prime_D_nonamer' OR cvterm.name = 'five_prime_D_nonamer' OR cvterm.name = 'J_nonamer' OR cvterm.name = 'V_nonamer' OR cvterm.name = 'integration_excision_site' OR cvterm.name = 'resolution_site' OR cvterm.name = 'inversion_site' OR cvterm.name = 'inversion_site_part' OR cvterm.name = 'attI_site' OR cvterm.name = 'attP_site' OR cvterm.name = 'attB_site' OR cvterm.name = 'attL_site' OR cvterm.name = 'attR_site' OR cvterm.name = 'attC_site' OR cvterm.name = 'attCtn_site' OR cvterm.name = 'loxP_site' OR cvterm.name = 'dif_site' OR cvterm.name = 'FRT_site' OR cvterm.name = 'IRLinv_site' OR cvterm.name = 'IRRinv_site' OR cvterm.name = 'protein_binding_site' OR cvterm.name = 'miRNA_target_site' OR cvterm.name = 'epitope' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'DNA_binding_site' OR cvterm.name = 'primer_binding_site' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'nuclease_binding_site' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'histone_binding_site' OR cvterm.name = 'insulator_binding_site' OR cvterm.name = 'enhancer_binding_site' OR cvterm.name = 'restriction_enzyme_binding_site' OR cvterm.name = 'nuclease_sensitive_site' OR cvterm.name = 'homing_endonuclease_binding_site' OR cvterm.name = 'nuclease_hypersensitive_site' OR cvterm.name = 'group_1_intron_homing_endonuclease_target_region' OR cvterm.name = 'DNAseI_hypersensitive_site' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'pseudogene' OR cvterm.name = 'decayed_exon' OR cvterm.name = 'pseudogenic_exon' OR cvterm.name = 'pseudogenic_transcript' OR cvterm.name = 'pseudogenic_rRNA' OR cvterm.name = 'pseudogenic_tRNA' OR cvterm.name = 'processed_pseudogene' OR cvterm.name = 'pseudogene_by_unequal_crossing_over' OR cvterm.name = 'nuclear_mt_pseudogene' OR cvterm.name = 'cassette_pseudogene' OR cvterm.name = 'transgenic_insertion' OR cvterm.name = 'nuclear_gene' OR cvterm.name = 'mt_gene' OR cvterm.name = 'plastid_gene' OR cvterm.name = 'nucleomorph_gene' OR cvterm.name = 'plasmid_gene' OR cvterm.name = 'proviral_gene' OR cvterm.name = 'transposable_element_gene' OR cvterm.name = 'silenced_gene' OR cvterm.name = 'engineered_gene' OR cvterm.name = 'foreign_gene' OR cvterm.name = 'fusion_gene' OR cvterm.name = 'recombinationally_rearranged_gene' OR cvterm.name = 'gene_with_trans_spliced_transcript' OR cvterm.name = 'gene_with_polycistronic_transcript' OR cvterm.name = 'rescue_gene' OR cvterm.name = 'post_translationally_regulated_gene' OR cvterm.name = 'negatively_autoregulated_gene' OR cvterm.name = 'positively_autoregulated_gene' OR cvterm.name = 'translationally_regulated_gene' OR cvterm.name = 'epigenetically_modified_gene' OR cvterm.name = 'transgene' OR cvterm.name = 'predicted_gene' OR cvterm.name = 'protein_coding_gene' OR cvterm.name = 'retrogene' OR cvterm.name = 'ncRNA_gene' OR cvterm.name = 'cryptic_gene' OR cvterm.name = 'gene_cassette' OR cvterm.name = 'kinetoplast_gene' OR cvterm.name = 'maxicircle_gene' OR cvterm.name = 'minicircle_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'apicoplast_gene' OR cvterm.name = 'ct_gene' OR cvterm.name = 'chromoplast_gene' OR cvterm.name = 'cyanelle_gene' OR cvterm.name = 'leucoplast_gene' OR cvterm.name = 'proplastid_gene' OR cvterm.name = 'endogenous_retroviral_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'gene_silenced_by_DNA_modification' OR cvterm.name = 'gene_silenced_by_RNA_interference' OR cvterm.name = 'gene_silenced_by_histone_modification' OR cvterm.name = 'gene_silenced_by_DNA_methylation' OR cvterm.name = 'gene_silenced_by_histone_methylation' OR cvterm.name = 'gene_silenced_by_histone_deacetylation' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_foreign_gene' OR cvterm.name = 'engineered_foreign_transposable_element_gene' OR cvterm.name = 'engineered_fusion_gene' OR cvterm.name = 'recombinationally_inverted_gene' OR cvterm.name = 'recombinationally_rearranged_vertebrate_immune_system_gene' OR cvterm.name = 'gene_with_dicistronic_transcript' OR cvterm.name = 'gene_with_dicistronic_primary_transcript' OR cvterm.name = 'gene_with_dicistronic_mRNA' OR cvterm.name = 'wild_type_rescue_gene' OR cvterm.name = 'gene_rearranged_at_DNA_level' OR cvterm.name = 'maternally_imprinted_gene' OR cvterm.name = 'paternally_imprinted_gene' OR cvterm.name = 'allelically_excluded_gene' OR cvterm.name = 'floxed_gene' OR cvterm.name = 'gene_with_polyadenylated_mRNA' OR cvterm.name = 'gene_with_mRNA_with_frameshift' OR cvterm.name = 'gene_with_edited_transcript' OR cvterm.name = 'gene_with_recoded_mRNA' OR cvterm.name = 'gene_with_stop_codon_read_through' OR cvterm.name = 'gene_with_mRNA_recoded_by_translational_bypass' OR cvterm.name = 'gene_with_transcript_with_translational_frameshift' OR cvterm.name = 'gene_with_stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'gene_with_stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'gRNA_gene' OR cvterm.name = 'miRNA_gene' OR cvterm.name = 'scRNA_gene' OR cvterm.name = 'snoRNA_gene' OR cvterm.name = 'snRNA_gene' OR cvterm.name = 'SRP_RNA_gene' OR cvterm.name = 'stRNA_gene' OR cvterm.name = 'tmRNA_gene' OR cvterm.name = 'tRNA_gene' OR cvterm.name = 'cryptogene' OR cvterm.name = 'DNA_motif' OR cvterm.name = 'RNA_motif' OR cvterm.name = 'PSE_motif' OR cvterm.name = 'GC_rich_promoter_region' OR cvterm.name = 'minus_10_signal' OR cvterm.name = 'minus_35_signal' OR cvterm.name = 'DMv4_motif' OR cvterm.name = 'DMv5_motif' OR cvterm.name = 'DMv3_motif' OR cvterm.name = 'DMv2_motif' OR cvterm.name = 'DPE1_motif' OR cvterm.name = 'DMv1_motif' OR cvterm.name = 'NDM2_motif' OR cvterm.name = 'NDM3_motif' OR cvterm.name = 'RNA_internal_loop' OR cvterm.name = 'A_minor_RNA_motif' OR cvterm.name = 'RNA_junction_loop' OR cvterm.name = 'hammerhead_ribozyme' OR cvterm.name = 'asymmetric_RNA_internal_loop' OR cvterm.name = 'symmetric_RNA_internal_loop' OR cvterm.name = 'K_turn_RNA_motif' OR cvterm.name = 'sarcin_like_RNA_motif' OR cvterm.name = 'RNA_hook_turn' OR cvterm.name = 'chromosome_arm' OR cvterm.name = 'chromosome_band' OR cvterm.name = 'interband' OR cvterm.name = 'chromosomal_regulatory_element' OR cvterm.name = 'chromosomal_structural_element' OR cvterm.name = 'introgressed_chromosome_region' OR cvterm.name = 'matrix_attachment_site' OR cvterm.name = 'centromere' OR cvterm.name = 'telomere' OR cvterm.name = 'transcript' OR cvterm.name = 'regulatory_region' OR cvterm.name = 'polycistronic_transcript' OR cvterm.name = 'transcript_with_translational_frameshift' OR cvterm.name = 'primary_transcript' OR cvterm.name = 'mature_transcript' OR cvterm.name = 'transcript_bound_by_nucleic_acid' OR cvterm.name = 'transcript_bound_by_protein' OR cvterm.name = 'enzymatic_RNA' OR cvterm.name = 'trans_spliced_transcript' OR cvterm.name = 'monocistronic_transcript' OR cvterm.name = 'aberrant_processed_transcript' OR cvterm.name = 'edited_transcript' OR cvterm.name = 'alternatively_spliced_transcript' OR cvterm.name = 'dicistronic_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'protein_coding_primary_transcript' OR cvterm.name = 'nc_primary_transcript' OR cvterm.name = 'polycistronic_primary_transcript' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'mini_exon_donor_RNA' OR cvterm.name = 'antisense_primary_transcript' OR cvterm.name = 'capped_primary_transcript' OR cvterm.name = 'pre_edited_mRNA' OR cvterm.name = 'scRNA_primary_transcript' OR cvterm.name = 'rRNA_primary_transcript' OR cvterm.name = 'tRNA_primary_transcript' OR cvterm.name = 'snRNA_primary_transcript' OR cvterm.name = 'snoRNA_primary_transcript' OR cvterm.name = 'tmRNA_primary_transcript' OR cvterm.name = 'SRP_RNA_primary_transcript' OR cvterm.name = 'miRNA_primary_transcript' OR cvterm.name = 'rRNA_small_subunit_primary_transcript' OR cvterm.name = 'rRNA_large_subunit_primary_transcript' OR cvterm.name = 'alanine_tRNA_primary_transcript' OR cvterm.name = 'arginine_tRNA_primary_transcript' OR cvterm.name = 'asparagine_tRNA_primary_transcript' OR cvterm.name = 'aspartic_acid_tRNA_primary_transcript' OR cvterm.name = 'cysteine_tRNA_primary_transcript' OR cvterm.name = 'glutamic_acid_tRNA_primary_transcript' OR cvterm.name = 'glutamine_tRNA_primary_transcript' OR cvterm.name = 'glycine_tRNA_primary_transcript' OR cvterm.name = 'histidine_tRNA_primary_transcript' OR cvterm.name = 'isoleucine_tRNA_primary_transcript' OR cvterm.name = 'leucine_tRNA_primary_transcript' OR cvterm.name = 'lysine_tRNA_primary_transcript' OR cvterm.name = 'methionine_tRNA_primary_transcript' OR cvterm.name = 'phenylalanine_tRNA_primary_transcript' OR cvterm.name = 'proline_tRNA_primary_transcript' OR cvterm.name = 'serine_tRNA_primary_transcript' OR cvterm.name = 'threonine_tRNA_primary_transcript' OR cvterm.name = 'tryptophan_tRNA_primary_transcript' OR cvterm.name = 'tyrosine_tRNA_primary_transcript' OR cvterm.name = 'valine_tRNA_primary_transcript' OR cvterm.name = 'pyrrolysine_tRNA_primary_transcript' OR cvterm.name = 'selenocysteine_tRNA_primary_transcript' OR cvterm.name = 'methylation_guide_snoRNA_primary_transcript' OR cvterm.name = 'rRNA_cleavage_snoRNA_primary_transcript' OR cvterm.name = 'C_D_box_snoRNA_primary_transcript' OR cvterm.name = 'H_ACA_box_snoRNA_primary_transcript' OR cvterm.name = 'U14_snoRNA_primary_transcript' OR cvterm.name = 'stRNA_primary_transcript' OR cvterm.name = 'dicistronic_primary_transcript' OR cvterm.name = 'mRNA' OR cvterm.name = 'ncRNA' OR cvterm.name = 'mRNA_with_frameshift' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'polycistronic_mRNA' OR cvterm.name = 'exemplar_mRNA' OR cvterm.name = 'capped_mRNA' OR cvterm.name = 'polyadenylated_mRNA' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'consensus_mRNA' OR cvterm.name = 'recoded_mRNA' OR cvterm.name = 'mRNA_with_minus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_1_frameshift' OR cvterm.name = 'mRNA_with_plus_2_frameshift' OR cvterm.name = 'mRNA_with_minus_2_frameshift' OR cvterm.name = 'dicistronic_mRNA' OR cvterm.name = 'mRNA_recoded_by_translational_bypass' OR cvterm.name = 'mRNA_recoded_by_codon_redefinition' OR cvterm.name = 'scRNA' OR cvterm.name = 'rRNA' OR cvterm.name = 'tRNA' OR cvterm.name = 'snRNA' OR cvterm.name = 'snoRNA' OR cvterm.name = 'small_regulatory_ncRNA' OR cvterm.name = 'RNase_MRP_RNA' OR cvterm.name = 'RNase_P_RNA' OR cvterm.name = 'telomerase_RNA' OR cvterm.name = 'vault_RNA' OR cvterm.name = 'Y_RNA' OR cvterm.name = 'rasiRNA' OR cvterm.name = 'SRP_RNA' OR cvterm.name = 'guide_RNA' OR cvterm.name = 'antisense_RNA' OR cvterm.name = 'siRNA' OR cvterm.name = 'stRNA' OR cvterm.name = 'class_II_RNA' OR cvterm.name = 'class_I_RNA' OR cvterm.name = 'piRNA' OR cvterm.name = 'lincRNA' OR cvterm.name = 'rRNA_cleavage_RNA' OR cvterm.name = 'small_subunit_rRNA' OR cvterm.name = 'large_subunit_rRNA' OR cvterm.name = 'rRNA_18S' OR cvterm.name = 'rRNA_16S' OR cvterm.name = 'rRNA_5_8S' OR cvterm.name = 'rRNA_5S' OR cvterm.name = 'rRNA_28S' OR cvterm.name = 'rRNA_23S' OR cvterm.name = 'rRNA_25S' OR cvterm.name = 'rRNA_21S' OR cvterm.name = 'alanyl_tRNA' OR cvterm.name = 'asparaginyl_tRNA' OR cvterm.name = 'aspartyl_tRNA' OR cvterm.name = 'cysteinyl_tRNA' OR cvterm.name = 'glutaminyl_tRNA' OR cvterm.name = 'glutamyl_tRNA' OR cvterm.name = 'glycyl_tRNA' OR cvterm.name = 'histidyl_tRNA' OR cvterm.name = 'isoleucyl_tRNA' OR cvterm.name = 'leucyl_tRNA' OR cvterm.name = 'lysyl_tRNA' OR cvterm.name = 'methionyl_tRNA' OR cvterm.name = 'phenylalanyl_tRNA' OR cvterm.name = 'prolyl_tRNA' OR cvterm.name = 'seryl_tRNA' OR cvterm.name = 'threonyl_tRNA' OR cvterm.name = 'tryptophanyl_tRNA' OR cvterm.name = 'tyrosyl_tRNA' OR cvterm.name = 'valyl_tRNA' OR cvterm.name = 'pyrrolysyl_tRNA' OR cvterm.name = 'arginyl_tRNA' OR cvterm.name = 'selenocysteinyl_tRNA' OR cvterm.name = 'U1_snRNA' OR cvterm.name = 'U2_snRNA' OR cvterm.name = 'U4_snRNA' OR cvterm.name = 'U4atac_snRNA' OR cvterm.name = 'U5_snRNA' OR cvterm.name = 'U6_snRNA' OR cvterm.name = 'U6atac_snRNA' OR cvterm.name = 'U11_snRNA' OR cvterm.name = 'U12_snRNA' OR cvterm.name = 'C_D_box_snoRNA' OR cvterm.name = 'H_ACA_box_snoRNA' OR cvterm.name = 'U14_snoRNA' OR cvterm.name = 'U3_snoRNA' OR cvterm.name = 'methylation_guide_snoRNA' OR cvterm.name = 'pseudouridylation_guide_snoRNA' OR cvterm.name = 'miRNA' OR cvterm.name = 'RNA_6S' OR cvterm.name = 'CsrB_RsmB_RNA' OR cvterm.name = 'DsrA_RNA' OR cvterm.name = 'OxyS_RNA' OR cvterm.name = 'RprA_RNA' OR cvterm.name = 'RRE_RNA' OR cvterm.name = 'spot_42_RNA' OR cvterm.name = 'tmRNA' OR cvterm.name = 'GcvB_RNA' OR cvterm.name = 'MicF_RNA' OR cvterm.name = 'ribozyme' OR cvterm.name = 'trans_spliced_mRNA' OR cvterm.name = 'monocistronic_primary_transcript' OR cvterm.name = 'monocistronic_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'edited_mRNA' OR cvterm.name = 'edited_transcript_by_A_to_I_substitution' OR cvterm.name = 'attenuator' OR cvterm.name = 'terminator' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'polyA_signal_sequence' OR cvterm.name = 'gene_group_regulatory_region' OR cvterm.name = 'transcriptional_cis_regulatory_region' OR cvterm.name = 'splicing_regulatory_region' OR cvterm.name = 'cis_regulatory_frameshift_element' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'eukaryotic_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'terminator_of_type_2_RNApol_III_promoter' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'operator' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'promoter' OR cvterm.name = 'insulator' OR cvterm.name = 'CRM' OR cvterm.name = 'promoter_targeting_sequence' OR cvterm.name = 'bidirectional_promoter' OR cvterm.name = 'RNA_polymerase_promoter' OR cvterm.name = 'RNApol_I_promoter' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'Phage_RNA_Polymerase_Promoter' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'SP6_RNA_Polymerase_Promoter' OR cvterm.name = 'T3_RNA_Polymerase_Promoter' OR cvterm.name = 'T7_RNA_Polymerase_Promoter' OR cvterm.name = 'locus_control_region' OR cvterm.name = 'enhancer' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'silencer' OR cvterm.name = 'enhancer_bound_by_factor' OR cvterm.name = 'shadow_enhancer' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'splice_enhancer' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'exonic_splice_enhancer' OR cvterm.name = 'exon' OR cvterm.name = 'edited_transcript_feature' OR cvterm.name = 'mature_transcript_region' OR cvterm.name = 'primary_transcript_region' OR cvterm.name = 'exon_region' OR cvterm.name = 'anchor_binding_site' OR cvterm.name = 'coding_exon' OR cvterm.name = 'noncoding_exon' OR cvterm.name = 'interior_exon' OR cvterm.name = 'exon_of_single_exon_gene' OR cvterm.name = 'interior_coding_exon' OR cvterm.name = 'five_prime_coding_exon' OR cvterm.name = 'three_prime_coding_exon' OR cvterm.name = 'three_prime_noncoding_exon' OR cvterm.name = 'five_prime_noncoding_exon' OR cvterm.name = 'pre_edited_region' OR cvterm.name = 'editing_block' OR cvterm.name = 'editing_domain' OR cvterm.name = 'unedited_region' OR cvterm.name = 'mRNA_region' OR cvterm.name = 'tmRNA_region' OR cvterm.name = 'guide_RNA_region' OR cvterm.name = 'tRNA_region' OR cvterm.name = 'riboswitch' OR cvterm.name = 'UTR' OR cvterm.name = 'CDS' OR cvterm.name = 'codon' OR cvterm.name = 'five_prime_open_reading_frame' OR cvterm.name = 'UTR_region' OR cvterm.name = 'CDS_region' OR cvterm.name = 'translational_frameshift' OR cvterm.name = 'recoding_stimulatory_region' OR cvterm.name = 'five_prime_UTR' OR cvterm.name = 'three_prime_UTR' OR cvterm.name = 'internal_UTR' OR cvterm.name = 'untranslated_region_polycistronic_mRNA' OR cvterm.name = 'edited_CDS' OR cvterm.name = 'CDS_fragment' OR cvterm.name = 'CDS_independently_known' OR cvterm.name = 'CDS_predicted' OR cvterm.name = 'orphan_CDS' OR cvterm.name = 'CDS_supported_by_sequence_similarity_data' OR cvterm.name = 'CDS_supported_by_domain_match_data' OR cvterm.name = 'CDS_supported_by_EST_or_cDNA_data' OR cvterm.name = 'recoded_codon' OR cvterm.name = 'start_codon' OR cvterm.name = 'stop_codon' OR cvterm.name = 'stop_codon_read_through' OR cvterm.name = 'stop_codon_redefined_as_pyrrolysine' OR cvterm.name = 'stop_codon_redefined_as_selenocysteine' OR cvterm.name = 'non_canonical_start_codon' OR cvterm.name = 'four_bp_start_codon' OR cvterm.name = 'CTG_start_codon' OR cvterm.name = 'ribosome_entry_site' OR cvterm.name = 'polyA_site' OR cvterm.name = 'upstream_AUG_codon' OR cvterm.name = 'AU_rich_element' OR cvterm.name = 'Bruno_response_element' OR cvterm.name = 'iron_responsive_element' OR cvterm.name = 'internal_ribosome_entry_site' OR cvterm.name = 'Shine_Dalgarno_sequence' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'coding_start' OR cvterm.name = 'coding_end' OR cvterm.name = 'plus_1_translational_frameshift' OR cvterm.name = 'plus_2_translational_frameshift' OR cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'SECIS_element' OR cvterm.name = 'three_prime_recoding_site' OR cvterm.name = 'five_prime_recoding_site' OR cvterm.name = 'stop_codon_signal' OR cvterm.name = 'three_prime_stem_loop_structure' OR cvterm.name = 'flanking_three_prime_quadruplet_recoding_signal' OR cvterm.name = 'three_prime_repeat_recoding_signal' OR cvterm.name = 'distant_three_prime_recoding_signal' OR cvterm.name = 'UAG_stop_codon_signal' OR cvterm.name = 'UAA_stop_codon_signal' OR cvterm.name = 'UGA_stop_codon_signal' OR cvterm.name = 'tmRNA_coding_piece' OR cvterm.name = 'tmRNA_acceptor_piece' OR cvterm.name = 'anchor_region' OR cvterm.name = 'template_region' OR cvterm.name = 'anticodon_loop' OR cvterm.name = 'anticodon' OR cvterm.name = 'CCA_tail' OR cvterm.name = 'DHU_loop' OR cvterm.name = 'T_loop' OR cvterm.name = 'splice_site' OR cvterm.name = 'intron' OR cvterm.name = 'clip' OR cvterm.name = 'TSS' OR cvterm.name = 'transcription_end_site' OR cvterm.name = 'spliced_leader_RNA' OR cvterm.name = 'rRNA_primary_transcript_region' OR cvterm.name = 'spliceosomal_intron_region' OR cvterm.name = 'intron_domain' OR cvterm.name = 'miRNA_primary_transcript_region' OR cvterm.name = 'outron' OR cvterm.name = 'cis_splice_site' OR cvterm.name = 'trans_splice_site' OR cvterm.name = 'five_prime_cis_splice_site' OR cvterm.name = 'three_prime_cis_splice_site' OR cvterm.name = 'recursive_splice_site' OR cvterm.name = 'canonical_five_prime_splice_site' OR cvterm.name = 'non_canonical_five_prime_splice_site' OR cvterm.name = 'canonical_three_prime_splice_site' OR cvterm.name = 'non_canonical_three_prime_splice_site' OR cvterm.name = 'trans_splice_acceptor_site' OR cvterm.name = 'trans_splice_donor_site' OR cvterm.name = 'SL1_acceptor_site' OR cvterm.name = 'SL2_acceptor_site' OR cvterm.name = 'five_prime_intron' OR cvterm.name = 'interior_intron' OR cvterm.name = 'three_prime_intron' OR cvterm.name = 'twintron' OR cvterm.name = 'UTR_intron' OR cvterm.name = 'autocatalytically_spliced_intron' OR cvterm.name = 'spliceosomal_intron' OR cvterm.name = 'mobile_intron' OR cvterm.name = 'endonuclease_spliced_intron' OR cvterm.name = 'five_prime_UTR_intron' OR cvterm.name = 'three_prime_UTR_intron' OR cvterm.name = 'group_I_intron' OR cvterm.name = 'group_II_intron' OR cvterm.name = 'group_III_intron' OR cvterm.name = 'group_IIA_intron' OR cvterm.name = 'group_IIB_intron' OR cvterm.name = 'U2_intron' OR cvterm.name = 'U12_intron' OR cvterm.name = 'archaeal_intron' OR cvterm.name = 'tRNA_intron' OR cvterm.name = 'five_prime_clip' OR cvterm.name = 'three_prime_clip' OR cvterm.name = 'major_TSS' OR cvterm.name = 'minor_TSS' OR cvterm.name = 'transcribed_spacer_region' OR cvterm.name = 'internal_transcribed_spacer_region' OR cvterm.name = 'external_transcribed_spacer_region' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'branch_site' OR cvterm.name = 'polypyrimidine_tract' OR cvterm.name = 'internal_guide_sequence' OR cvterm.name = 'mirtron' OR cvterm.name = 'pre_miRNA' OR cvterm.name = 'miRNA_stem' OR cvterm.name = 'miRNA_loop' OR cvterm.name = 'miRNA_antiguide' OR cvterm.name = 'noncoding_region_of_exon' OR cvterm.name = 'coding_region_of_exon' OR cvterm.name = 'three_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_noncoding_region' OR cvterm.name = 'five_prime_coding_exon_coding_region' OR cvterm.name = 'three_prime_coding exon_coding_region' OR cvterm.name = 'mature_protein_region' OR cvterm.name = 'immature_peptide_region' OR cvterm.name = 'compositionally_biased_region_of_peptide' OR cvterm.name = 'polypeptide_structural_region' OR cvterm.name = 'polypeptide_variation_site' OR cvterm.name = 'cleaved_peptide_region' OR cvterm.name = 'hydrophobic_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_region' OR cvterm.name = 'active_peptide' OR cvterm.name = 'polypeptide_domain' OR cvterm.name = 'membrane_structure' OR cvterm.name = 'extramembrane_polypeptide_region' OR cvterm.name = 'intramembrane_polypeptide_region' OR cvterm.name = 'polypeptide_secondary_structure' OR cvterm.name = 'polypeptide_structural_motif' OR cvterm.name = 'intrinsically_unstructured_polypeptide_region' OR cvterm.name = 'cytoplasmic_polypeptide_region' OR cvterm.name = 'non_cytoplasmic_polypeptide_region' OR cvterm.name = 'membrane_peptide_loop' OR cvterm.name = 'transmembrane_polypeptide_region' OR cvterm.name = 'asx_motif' OR cvterm.name = 'beta_bulge' OR cvterm.name = 'beta_bulge_loop' OR cvterm.name = 'beta_strand' OR cvterm.name = 'peptide_helix' OR cvterm.name = 'polypeptide_nest_motif' OR cvterm.name = 'schellmann_loop' OR cvterm.name = 'serine_threonine_motif' OR cvterm.name = 'serine_threonine_staple_motif' OR cvterm.name = 'polypeptide_turn_motif' OR cvterm.name = 'catmat_left_handed_three' OR cvterm.name = 'catmat_left_handed_four' OR cvterm.name = 'catmat_right_handed_three' OR cvterm.name = 'catmat_right_handed_four' OR cvterm.name = 'alpha_beta_motif' OR cvterm.name = 'peptide_coil' OR cvterm.name = 'beta_bulge_loop_five' OR cvterm.name = 'beta_bulge_loop_six' OR cvterm.name = 'antiparallel_beta_strand' OR cvterm.name = 'parallel_beta_strand' OR cvterm.name = 'left_handed_peptide_helix' OR cvterm.name = 'right_handed_peptide_helix' OR cvterm.name = 'alpha_helix' OR cvterm.name = 'pi_helix' OR cvterm.name = 'three_ten_helix' OR cvterm.name = 'polypeptide_nest_left_right_motif' OR cvterm.name = 'polypeptide_nest_right_left_motif' OR cvterm.name = 'schellmann_loop_seven' OR cvterm.name = 'schellmann_loop_six' OR cvterm.name = 'asx_turn' OR cvterm.name = 'beta_turn' OR cvterm.name = 'gamma_turn' OR cvterm.name = 'serine_threonine_turn' OR cvterm.name = 'asx_turn_left_handed_type_one' OR cvterm.name = 'asx_turn_left_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_two' OR cvterm.name = 'asx_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_one' OR cvterm.name = 'beta_turn_left_handed_type_two' OR cvterm.name = 'beta_turn_right_handed_type_one' OR cvterm.name = 'beta_turn_right_handed_type_two' OR cvterm.name = 'beta_turn_type_six' OR cvterm.name = 'beta_turn_type_eight' OR cvterm.name = 'beta_turn_type_six_a' OR cvterm.name = 'beta_turn_type_six_b' OR cvterm.name = 'beta_turn_type_six_a_one' OR cvterm.name = 'beta_turn_type_six_a_two' OR cvterm.name = 'gamma_turn_classic' OR cvterm.name = 'gamma_turn_inverse' OR cvterm.name = 'st_turn_left_handed_type_one' OR cvterm.name = 'st_turn_left_handed_type_two' OR cvterm.name = 'st_turn_right_handed_type_one' OR cvterm.name = 'st_turn_right_handed_type_two' OR cvterm.name = 'coiled_coil' OR cvterm.name = 'helix_turn_helix' OR cvterm.name = 'natural_variant_site' OR cvterm.name = 'mutated_variant_site' OR cvterm.name = 'alternate_sequence_site' OR cvterm.name = 'signal_peptide' OR cvterm.name = 'cleaved_initiator_methionine' OR cvterm.name = 'transit_peptide' OR cvterm.name = 'intein' OR cvterm.name = 'propeptide_cleavage_site' OR cvterm.name = 'propeptide' OR cvterm.name = 'cleaved_for_gpi_anchor_region' OR cvterm.name = 'lipoprotein_signal_peptide' OR cvterm.name = 'n_terminal_region' OR cvterm.name = 'c_terminal_region' OR cvterm.name = 'central_hydrophobic_region_of_signal_peptide' OR cvterm.name = 'polypeptide_domain' OR cvterm.name = 'polypeptide_motif' OR cvterm.name = 'polypeptide_repeat' OR cvterm.name = 'biochemical_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_motif' OR cvterm.name = 'post_translationally_modified_region' OR cvterm.name = 'conformational_switch' OR cvterm.name = 'molecular_contact_region' OR cvterm.name = 'polypeptide_binding_motif' OR cvterm.name = 'polypeptide_catalytic_motif' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'non_transcribed_region' OR cvterm.name = 'gene_fragment' OR cvterm.name = 'TSS_region' OR cvterm.name = 'gene_segment' OR cvterm.name = 'mobile_intron' OR cvterm.name = 'extrachromosomal_mobile_genetic_element' OR cvterm.name = 'integrated_mobile_genetic_element' OR cvterm.name = 'viral_sequence' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'transposable_element' OR cvterm.name = 'proviral_region' OR cvterm.name = 'integron' OR cvterm.name = 'genomic_island' OR cvterm.name = 'integrated_plasmid' OR cvterm.name = 'cointegrated_plasmid' OR cvterm.name = 'retrotransposon' OR cvterm.name = 'DNA_transposon' OR cvterm.name = 'foreign_transposable_element' OR cvterm.name = 'transgenic_transposable_element' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'engineered_transposable_element' OR cvterm.name = 'transposon_fragment' OR cvterm.name = 'LTR_retrotransposon' OR cvterm.name = 'non_LTR_retrotransposon' OR cvterm.name = 'RR_tract' OR cvterm.name = 'LINE_element' OR cvterm.name = 'SINE_element' OR cvterm.name = 'terminal_inverted_repeat_element' OR cvterm.name = 'foldback_element' OR cvterm.name = 'conjugative_transposon' OR cvterm.name = 'helitron' OR cvterm.name = 'MITE' OR cvterm.name = 'insertion_sequence' OR cvterm.name = 'polinton' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'engineered_foreign_transposable_element' OR cvterm.name = 'prophage' OR cvterm.name = 'pathogenic_island' OR cvterm.name = 'metabolic_island' OR cvterm.name = 'adaptive_island' OR cvterm.name = 'symbiosis_island' OR cvterm.name = 'cryptic_prophage' OR cvterm.name = 'defective_conjugative_transposon' OR cvterm.name = 'plasmid' OR cvterm.name = 'chromosome' OR cvterm.name = 'vector_replicon' OR cvterm.name = 'maxicircle' OR cvterm.name = 'minicircle' OR cvterm.name = 'viral_sequence' OR cvterm.name = 'engineered_plasmid' OR cvterm.name = 'episome' OR cvterm.name = 'natural_plasmid' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'gene_trap_construct' OR cvterm.name = 'promoter_trap_construct' OR cvterm.name = 'enhancer_trap_construct' OR cvterm.name = 'engineered_episome' OR cvterm.name = 'natural_transposable_element' OR cvterm.name = 'mitochondrial_chromosome' OR cvterm.name = 'chloroplast_chromosome' OR cvterm.name = 'chromoplast_chromosome' OR cvterm.name = 'cyanelle_chromosome' OR cvterm.name = 'leucoplast_chromosome' OR cvterm.name = 'macronuclear_chromosome' OR cvterm.name = 'micronuclear_chromosome' OR cvterm.name = 'nuclear_chromosome' OR cvterm.name = 'nucleomorphic_chromosome' OR cvterm.name = 'DNA_chromosome' OR cvterm.name = 'RNA_chromosome' OR cvterm.name = 'apicoplast_chromosome' OR cvterm.name = 'double_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_DNA_chromosome' OR cvterm.name = 'linear_double_stranded_DNA_chromosome' OR cvterm.name = 'circular_double_stranded_DNA_chromosome' OR cvterm.name = 'linear_single_stranded_DNA_chromosome' OR cvterm.name = 'circular_single_stranded_DNA_chromosome' OR cvterm.name = 'single_stranded_RNA_chromosome' OR cvterm.name = 'double_stranded_RNA_chromosome' OR cvterm.name = 'linear_single_stranded_RNA_chromosome' OR cvterm.name = 'circular_single_stranded_RNA_chromosome' OR cvterm.name = 'linear_double_stranded_RNA_chromosome' OR cvterm.name = 'circular_double_stranded_RNA_chromosome' OR cvterm.name = 'YAC' OR cvterm.name = 'BAC' OR cvterm.name = 'PAC' OR cvterm.name = 'cosmid' OR cvterm.name = 'phagemid' OR cvterm.name = 'fosmid' OR cvterm.name = 'lambda_vector' OR cvterm.name = 'plasmid_vector' OR cvterm.name = 'phage_sequence' OR cvterm.name = 'ds_RNA_viral_sequence' OR cvterm.name = 'ds_DNA_viral_sequence' OR cvterm.name = 'ss_RNA_viral_sequence' OR cvterm.name = 'negative_sense_ssRNA_viral_sequence' OR cvterm.name = 'positive_sense_ssRNA_viral_sequence' OR cvterm.name = 'ambisense_ssRNA_viral_sequence' OR cvterm.name = 'modified_RNA_base_feature' OR cvterm.name = 'modified_base_site' OR cvterm.name = 'inosine' OR cvterm.name = 'seven_methylguanine' OR cvterm.name = 'ribothymidine' OR cvterm.name = 'modified_adenosine' OR cvterm.name = 'modified_cytidine' OR cvterm.name = 'modified_guanosine' OR cvterm.name = 'modified_uridine' OR cvterm.name = 'modified_inosine' OR cvterm.name = 'methylinosine' OR cvterm.name = 'one_methylinosine' OR cvterm.name = 'one_two_prime_O_dimethylinosine' OR cvterm.name = 'two_prime_O_methylinosine' OR cvterm.name = 'one_methyladenosine' OR cvterm.name = 'two_methyladenosine' OR cvterm.name = 'N6_methyladenosine' OR cvterm.name = 'two_prime_O_methyladenosine' OR cvterm.name = 'two_methylthio_N6_methyladenosine' OR cvterm.name = 'N6_isopentenyladenosine' OR cvterm.name = 'two_methylthio_N6_isopentenyladenosine' OR cvterm.name = 'N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'two_methylthio_N6_cis_hydroxyisopentenyl_adenosine' OR cvterm.name = 'N6_glycinylcarbamoyladenosine' OR cvterm.name = 'N6_threonylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_threonyl_carbamoyladenosine' OR cvterm.name = 'N6_methyl_N6_threonylcarbamoyladenosine' OR cvterm.name = 'N6_hydroxynorvalylcarbamoyladenosine' OR cvterm.name = 'two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine' OR cvterm.name = 'two_prime_O_ribosyladenosine_phosphate' OR cvterm.name = 'N6_N6_dimethyladenosine' OR cvterm.name = 'N6_2_prime_O_dimethyladenosine' OR cvterm.name = 'N6_N6_2_prime_O_trimethyladenosine' OR cvterm.name = 'one_two_prime_O_dimethyladenosine' OR cvterm.name = 'N6_acetyladenosine' OR cvterm.name = 'three_methylcytidine' OR cvterm.name = 'five_methylcytidine' OR cvterm.name = 'two_prime_O_methylcytidine' OR cvterm.name = 'two_thiocytidine' OR cvterm.name = 'N4_acetylcytidine' OR cvterm.name = 'five_formylcytidine' OR cvterm.name = 'five_two_prime_O_dimethylcytidine' OR cvterm.name = 'N4_acetyl_2_prime_O_methylcytidine' OR cvterm.name = 'lysidine' OR cvterm.name = 'N4_methylcytidine' OR cvterm.name = 'N4_2_prime_O_dimethylcytidine' OR cvterm.name = 'five_hydroxymethylcytidine' OR cvterm.name = 'five_formyl_two_prime_O_methylcytidine' OR cvterm.name = 'N4_N4_2_prime_O_trimethylcytidine' OR cvterm.name = 'seven_deazaguanosine' OR cvterm.name = 'one_methylguanosine' OR cvterm.name = 'N2_methylguanosine' OR cvterm.name = 'seven_methylguanosine' OR cvterm.name = 'two_prime_O_methylguanosine' OR cvterm.name = 'N2_N2_dimethylguanosine' OR cvterm.name = 'N2_2_prime_O_dimethylguanosine' OR cvterm.name = 'N2_N2_2_prime_O_trimethylguanosine' OR cvterm.name = 'two_prime_O_ribosylguanosine_phosphate' OR cvterm.name = 'wybutosine' OR cvterm.name = 'peroxywybutosine' OR cvterm.name = 'hydroxywybutosine' OR cvterm.name = 'undermodified_hydroxywybutosine' OR cvterm.name = 'wyosine' OR cvterm.name = 'methylwyosine' OR cvterm.name = 'N2_7_dimethylguanosine' OR cvterm.name = 'N2_N2_7_trimethylguanosine' OR cvterm.name = 'one_two_prime_O_dimethylguanosine' OR cvterm.name = 'four_demethylwyosine' OR cvterm.name = 'isowyosine' OR cvterm.name = 'N2_7_2prirme_O_trimethylguanosine' OR cvterm.name = 'queuosine' OR cvterm.name = 'epoxyqueuosine' OR cvterm.name = 'galactosyl_queuosine' OR cvterm.name = 'mannosyl_queuosine' OR cvterm.name = 'seven_cyano_seven_deazaguanosine' OR cvterm.name = 'seven_aminomethyl_seven_deazaguanosine' OR cvterm.name = 'archaeosine' OR cvterm.name = 'dihydrouridine' OR cvterm.name = 'pseudouridine' OR cvterm.name = 'five_methyluridine' OR cvterm.name = 'two_prime_O_methyluridine' OR cvterm.name = 'five_two_prime_O_dimethyluridine' OR cvterm.name = 'one_methylpseudouridine' OR cvterm.name = 'two_prime_O_methylpseudouridine' OR cvterm.name = 'two_thiouridine' OR cvterm.name = 'four_thiouridine' OR cvterm.name = 'five_methyl_2_thiouridine' OR cvterm.name = 'two_thio_two_prime_O_methyluridine' OR cvterm.name = 'three_three_amino_three_carboxypropyl_uridine' OR cvterm.name = 'five_hydroxyuridine' OR cvterm.name = 'five_methoxyuridine' OR cvterm.name = 'uridine_five_oxyacetic_acid' OR cvterm.name = 'uridine_five_oxyacetic_acid_methyl_ester' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine' OR cvterm.name = 'five_carboxyhydroxymethyl_uridine_methyl_ester' OR cvterm.name = 'five_methoxycarbonylmethyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_methoxycarbonylmethyl_two_thiouridine' OR cvterm.name = 'five_aminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyluridine' OR cvterm.name = 'five_methylaminomethyl_two_thiouridine' OR cvterm.name = 'five_methylaminomethyl_two_selenouridine' OR cvterm.name = 'five_carbamoylmethyluridine' OR cvterm.name = 'five_carbamoylmethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'five_carboxymethylaminomethyl_two_thiouridine' OR cvterm.name = 'three_methyluridine' OR cvterm.name = 'one_methyl_three_three_amino_three_carboxypropyl_pseudouridine' OR cvterm.name = 'five_carboxymethyluridine' OR cvterm.name = 'three_two_prime_O_dimethyluridine' OR cvterm.name = 'five_methyldihydrouridine' OR cvterm.name = 'three_methylpseudouridine' OR cvterm.name = 'five_taurinomethyluridine' OR cvterm.name = 'five_taurinomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_uridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_thiouridine' OR cvterm.name = 'five_isopentenylaminomethyl_two_prime_O_methyluridine' OR cvterm.name = 'methylated_base_feature' OR cvterm.name = 'methylated_C' OR cvterm.name = 'methylated_A' OR cvterm.name = 'catalytic_residue' OR cvterm.name = 'modified_amino_acid_feature' OR cvterm.name = 'alanine' OR cvterm.name = 'valine' OR cvterm.name = 'leucine' OR cvterm.name = 'isoleucine' OR cvterm.name = 'proline' OR cvterm.name = 'tryptophan' OR cvterm.name = 'phenylalanine' OR cvterm.name = 'methionine' OR cvterm.name = 'glycine' OR cvterm.name = 'serine' OR cvterm.name = 'threonine' OR cvterm.name = 'tyrosine' OR cvterm.name = 'cysteine' OR cvterm.name = 'glutamine' OR cvterm.name = 'asparagine' OR cvterm.name = 'lysine' OR cvterm.name = 'argenine' OR cvterm.name = 'histidine' OR cvterm.name = 'aspartic_acid' OR cvterm.name = 'glutamic_acid' OR cvterm.name = 'selenocysteine' OR cvterm.name = 'pyrrolysine' OR cvterm.name = 'modified_glycine' OR cvterm.name = 'modified_L_alanine' OR cvterm.name = 'modified_L_asparagine' OR cvterm.name = 'modified_L_aspartic_acid' OR cvterm.name = 'modified_L_cysteine' OR cvterm.name = 'modified_L_glutamic_acid' OR cvterm.name = 'modified_L_threonine' OR cvterm.name = 'modified_L_tryptophan' OR cvterm.name = 'modified_L_glutamine' OR cvterm.name = 'modified_L_methionine' OR cvterm.name = 'modified_L_isoleucine' OR cvterm.name = 'modified_L_phenylalanine' OR cvterm.name = 'modified_L_histidine' OR cvterm.name = 'modified_L_serine' OR cvterm.name = 'modified_L_lysine' OR cvterm.name = 'modified_L_leucine' OR cvterm.name = 'modified_L_selenocysteine' OR cvterm.name = 'modified_L_valine' OR cvterm.name = 'modified_L_proline' OR cvterm.name = 'modified_L_tyrosine' OR cvterm.name = 'modified_L_arginine' OR cvterm.name = 'operon' OR cvterm.name = 'gene_array' OR cvterm.name = 'gene_subarray' OR cvterm.name = 'gene_cassette_array' OR cvterm.name = 'regulon' OR cvterm.name = 'sequence_length_variation' OR cvterm.name = 'SNP' OR cvterm.name = 'complex_substitution' OR cvterm.name = 'point_mutation' OR cvterm.name = 'simple_sequence_length_variation' OR cvterm.name = 'MNP' OR cvterm.name = 'transition' OR cvterm.name = 'transversion' OR cvterm.name = 'pyrimidine_transition' OR cvterm.name = 'purine_transition' OR cvterm.name = 'C_to_T_transition' OR cvterm.name = 'T_to_C_transition' OR cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'A_to_G_transition' OR cvterm.name = 'G_to_A_transition' OR cvterm.name = 'pyrimidine_to_purine_transversion' OR cvterm.name = 'purine_to_pyrimidine_transversion' OR cvterm.name = 'C_to_A_transversion' OR cvterm.name = 'C_to_G_transversion' OR cvterm.name = 'T_to_A_transversion' OR cvterm.name = 'T_to_G_transversion' OR cvterm.name = 'A_to_C_transversion' OR cvterm.name = 'A_to_T_transversion' OR cvterm.name = 'G_to_C_transversion' OR cvterm.name = 'G_to_T_transversion' OR cvterm.name = 'biological_region';
> 
> --- ************************************************
> --- *** relation: topologically_defined_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region that is defined according to it ***
> --- *** s relations with other regions within th ***
> --- *** e same sequence.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW topologically_defined_region AS
>   SELECT
>     feature_id AS topologically_defined_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'flanking_region' OR cvterm.name = 'repeat_region' OR cvterm.name = 'repeat_unit' OR cvterm.name = 'repeat_component' OR cvterm.name = 'transposable_element_flanking_region' OR cvterm.name = 'five_prime_flanking_region' OR cvterm.name = 'three_prime_flanking_region' OR cvterm.name = 'long_terminal_repeat' OR cvterm.name = 'engineered_foreign_repetitive_element' OR cvterm.name = 'inverted_repeat' OR cvterm.name = 'direct_repeat' OR cvterm.name = 'non_LTR_retrotransposon_polymeric_tract' OR cvterm.name = 'dispersed_repeat' OR cvterm.name = 'tandem_repeat' OR cvterm.name = 'repeat_fragment' OR cvterm.name = 'five_prime_LTR' OR cvterm.name = 'three_prime_LTR' OR cvterm.name = 'solo_LTR' OR cvterm.name = 'terminal_inverted_repeat' OR cvterm.name = 'five_prime_terminal_inverted_repeat' OR cvterm.name = 'three_prime_terminal_inverted_repeat' OR cvterm.name = 'target_site_duplication' OR cvterm.name = 'CRISPR' OR cvterm.name = 'satellite_DNA' OR cvterm.name = 'microsatellite' OR cvterm.name = 'minisatellite' OR cvterm.name = 'dinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'trinucleotide_repeat_microsatellite_feature' OR cvterm.name = 'tetranucleotide_repeat_microsatellite_feature' OR cvterm.name = 'non_LTR_retrotransposon_polymeric_tract' OR cvterm.name = 'LTR_component' OR cvterm.name = 'repeat_fragment' OR cvterm.name = 'U5_LTR_region' OR cvterm.name = 'R_LTR_region' OR cvterm.name = 'U3_LTR_region' OR cvterm.name = 'three_prime_LTR_component' OR cvterm.name = 'five_prime_LTR_component' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'R_three_prime_LTR_region' OR cvterm.name = 'U3_three_prime_LTR_region' OR cvterm.name = 'U5_three_prime_LTR_region' OR cvterm.name = 'R_five_prime_LTR_region' OR cvterm.name = 'U5_five_prime_LTR_region' OR cvterm.name = 'U3_five_prime_LTR_region' OR cvterm.name = 'topologically_defined_region';
> 
> --- ************************************************
> --- *** relation: translocation_breakpoint ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The point within a chromosome where a tr ***
> --- *** anslocation begins or ends.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW translocation_breakpoint AS
>   SELECT
>     feature_id AS translocation_breakpoint_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'translocation_breakpoint';
> 
> --- ************************************************
> --- *** relation: insertion_breakpoint ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The point within a chromosome where a in ***
> --- *** sertion begins or ends.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW insertion_breakpoint AS
>   SELECT
>     feature_id AS insertion_breakpoint_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'insertion_breakpoint';
> 
> --- ************************************************
> --- *** relation: deletion_breakpoint ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The point within a chromosome where a de ***
> --- *** letion begins or ends.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW deletion_breakpoint AS
>   SELECT
>     feature_id AS deletion_breakpoint_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deletion_breakpoint';
> 
> --- ************************************************
> --- *** relation: five_prime_flanking_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A flanking region located five prime of  ***
> --- *** a specific region.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_flanking_region AS
>   SELECT
>     feature_id AS five_prime_flanking_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_flanking_region';
> 
> --- ************************************************
> --- *** relation: three_prime_flanking_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A flanking region located three prime of ***
> --- ***  a specific region.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_flanking_region AS
>   SELECT
>     feature_id AS three_prime_flanking_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_flanking_region';
> 
> --- ************************************************
> --- *** relation: transcribed_fragment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An experimental region, defined by a til ***
> --- *** ing array experiment to be transcribed a ***
> --- *** t some level.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcribed_fragment AS
>   SELECT
>     feature_id AS transcribed_fragment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transcribed_fragment';
> 
> --- ************************************************
> --- *** relation: cis_splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Intronic 2 bp region bordering exon. A s ***
> --- *** plice_site that adjacent_to exon and ove ***
> --- *** rlaps intron.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW cis_splice_site AS
>   SELECT
>     feature_id AS cis_splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_cis_splice_site' OR cvterm.name = 'three_prime_cis_splice_site' OR cvterm.name = 'recursive_splice_site' OR cvterm.name = 'canonical_five_prime_splice_site' OR cvterm.name = 'non_canonical_five_prime_splice_site' OR cvterm.name = 'canonical_three_prime_splice_site' OR cvterm.name = 'non_canonical_three_prime_splice_site' OR cvterm.name = 'cis_splice_site';
> 
> --- ************************************************
> --- *** relation: trans_splice_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Primary transcript region bordering tran ***
> --- *** s-splice junction.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW trans_splice_site AS
>   SELECT
>     feature_id AS trans_splice_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'trans_splice_acceptor_site' OR cvterm.name = 'trans_splice_donor_site' OR cvterm.name = 'SL1_acceptor_site' OR cvterm.name = 'SL2_acceptor_site' OR cvterm.name = 'trans_splice_site';
> 
> --- ************************************************
> --- *** relation: splice_junction ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The boundary between an intron and an ex ***
> --- *** on.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW splice_junction AS
>   SELECT
>     feature_id AS splice_junction_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'splice_junction';
> 
> --- ************************************************
> --- *** relation: conformational_switch ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a polypeptide, involved in t ***
> --- *** he transition from one conformational st ***
> --- *** ate to another.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW conformational_switch AS
>   SELECT
>     feature_id AS conformational_switch_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'conformational_switch';
> 
> --- ************************************************
> --- *** relation: dye_terminator_read ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A read produced by the dye terminator me ***
> --- *** thod of sequencing.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW dye_terminator_read AS
>   SELECT
>     feature_id AS dye_terminator_read_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dye_terminator_read';
> 
> --- ************************************************
> --- *** relation: pyrosequenced_read ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A read produced by pyrosequencing techno ***
> --- *** logy.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW pyrosequenced_read AS
>   SELECT
>     feature_id AS pyrosequenced_read_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pyrosequenced_read';
> 
> --- ************************************************
> --- *** relation: ligation_based_read ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A read produced by ligation based sequen ***
> --- *** cing technologies.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW ligation_based_read AS
>   SELECT
>     feature_id AS ligation_based_read_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'ligation_based_read';
> 
> --- ************************************************
> --- *** relation: polymerase_synthesis_read ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A read produced by the polymerase based  ***
> --- *** sequence by synthesis method.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW polymerase_synthesis_read AS
>   SELECT
>     feature_id AS polymerase_synthesis_read_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polymerase_synthesis_read';
> 
> --- ************************************************
> --- *** relation: cis_regulatory_frameshift_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A structural region in an RNA molecule w ***
> --- *** hich promotes ribosomal frameshifting of ***
> --- ***  cis coding sequence.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW cis_regulatory_frameshift_element AS
>   SELECT
>     feature_id AS cis_regulatory_frameshift_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cis_regulatory_frameshift_element';
> 
> --- ************************************************
> --- *** relation: expressed_sequence_assembly ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence assembly derived from express ***
> --- *** ed sequences.                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW expressed_sequence_assembly AS
>   SELECT
>     feature_id AS expressed_sequence_assembly_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'expressed_sequence_assembly';
> 
> --- ************************************************
> --- *** relation: dna_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a molecule that binds to DNA ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW dna_binding_site AS
>   SELECT
>     feature_id AS dna_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'DNA_binding_site';
> 
> --- ************************************************
> --- *** relation: polya_junction ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The boundary between the UTR and the pol ***
> --- *** yA sequence.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW polya_junction AS
>   SELECT
>     feature_id AS polya_junction_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polyA_junction';
> 
> --- ************************************************
> --- *** relation: cryptic_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is not transcribed under nor ***
> --- *** mal conditions and is not critical to no ***
> --- *** rmal cellular functioning.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW cryptic_gene AS
>   SELECT
>     feature_id AS cryptic_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cryptogene' OR cvterm.name = 'cryptic_gene';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_polyadenylation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_polyadenylation AS
>   SELECT
>     feature_id AS sequence_variant_affecting_polyadenylation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_polyadenylation';
> 
> --- ************************************************
> --- *** relation: three_prime_race_clone ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A three prime RACE (Rapid Amplification  ***
> --- *** of cDNA Ends) clone is a cDNA clone copi ***
> --- *** ed from the 3' end of an mRNA (using a p ***
> --- *** oly-dT primer to capture the polyA tail  ***
> --- *** and a gene-specific or randomly primed 5 ***
> --- *** ' primer), and spliced into a vector for ***
> --- ***  propagation in a suitable host.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_race_clone AS
>   SELECT
>     feature_id AS three_prime_race_clone_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_RACE_clone';
> 
> --- ************************************************
> --- *** relation: cassette_pseudogene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A cassette pseudogene is a kind of gene  ***
> --- *** in an innactive form which may recombine ***
> --- ***  at a telomeric locus to form a function ***
> --- *** al copy.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW cassette_pseudogene AS
>   SELECT
>     feature_id AS cassette_pseudogene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cassette_pseudogene';
> 
> --- ************************************************
> --- *** relation: alanine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW alanine AS
>   SELECT
>     feature_id AS alanine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alanine';
> 
> --- ************************************************
> --- *** relation: valine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW valine AS
>   SELECT
>     feature_id AS valine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'valine';
> 
> --- ************************************************
> --- *** relation: leucine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW leucine AS
>   SELECT
>     feature_id AS leucine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'leucine';
> 
> --- ************************************************
> --- *** relation: isoleucine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW isoleucine AS
>   SELECT
>     feature_id AS isoleucine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'isoleucine';
> 
> --- ************************************************
> --- *** relation: proline ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW proline AS
>   SELECT
>     feature_id AS proline_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'proline';
> 
> --- ************************************************
> --- *** relation: tryptophan ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW tryptophan AS
>   SELECT
>     feature_id AS tryptophan_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tryptophan';
> 
> --- ************************************************
> --- *** relation: phenylalanine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW phenylalanine AS
>   SELECT
>     feature_id AS phenylalanine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'phenylalanine';
> 
> --- ************************************************
> --- *** relation: methionine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW methionine AS
>   SELECT
>     feature_id AS methionine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methionine';
> 
> --- ************************************************
> --- *** relation: glycine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW glycine AS
>   SELECT
>     feature_id AS glycine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'glycine';
> 
> --- ************************************************
> --- *** relation: serine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW serine AS
>   SELECT
>     feature_id AS serine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'serine';
> 
> --- ************************************************
> --- *** relation: threonine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW threonine AS
>   SELECT
>     feature_id AS threonine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'threonine';
> 
> --- ************************************************
> --- *** relation: tyrosine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW tyrosine AS
>   SELECT
>     feature_id AS tyrosine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tyrosine';
> 
> --- ************************************************
> --- *** relation: cysteine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW cysteine AS
>   SELECT
>     feature_id AS cysteine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cysteine';
> 
> --- ************************************************
> --- *** relation: glutamine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW glutamine AS
>   SELECT
>     feature_id AS glutamine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'glutamine';
> 
> --- ************************************************
> --- *** relation: asparagine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW asparagine AS
>   SELECT
>     feature_id AS asparagine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'asparagine';
> 
> --- ************************************************
> --- *** relation: lysine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW lysine AS
>   SELECT
>     feature_id AS lysine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'lysine';
> 
> --- ************************************************
> --- *** relation: argenine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW argenine AS
>   SELECT
>     feature_id AS argenine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'argenine';
> 
> --- ************************************************
> --- *** relation: histidine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW histidine AS
>   SELECT
>     feature_id AS histidine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'histidine';
> 
> --- ************************************************
> --- *** relation: aspartic_acid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW aspartic_acid AS
>   SELECT
>     feature_id AS aspartic_acid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'aspartic_acid';
> 
> --- ************************************************
> --- *** relation: glutamic_acid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW glutamic_acid AS
>   SELECT
>     feature_id AS glutamic_acid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'glutamic_acid';
> 
> --- ************************************************
> --- *** relation: selenocysteine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW selenocysteine AS
>   SELECT
>     feature_id AS selenocysteine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'selenocysteine';
> 
> --- ************************************************
> --- *** relation: pyrrolysine ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW pyrrolysine AS
>   SELECT
>     feature_id AS pyrrolysine_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pyrrolysine';
> 
> --- ************************************************
> --- *** relation: transcribed_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region defined by a set of transcribed ***
> --- ***  sequences from the same gene or express ***
> --- *** ed pseudogene.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW transcribed_cluster AS
>   SELECT
>     feature_id AS transcribed_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'unigene_cluster' OR cvterm.name = 'transcribed_cluster';
> 
> --- ************************************************
> --- *** relation: unigene_cluster ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A kind of transcribed_cluster defined by ***
> --- ***  a set of transcribed sequences from the ***
> --- ***  a unique gene.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW unigene_cluster AS
>   SELECT
>     feature_id AS unigene_cluster_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'unigene_cluster';
> 
> --- ************************************************
> --- *** relation: crispr ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Clustered Palindromic Repeats interspers ***
> --- *** ed with bacteriophage derived spacer seq ***
> --- *** uences.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW crispr AS
>   SELECT
>     feature_id AS crispr_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CRISPR';
> 
> --- ************************************************
> --- *** relation: insulator_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A protein_binding_site located within an ***
> --- ***  insulator.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW insulator_binding_site AS
>   SELECT
>     feature_id AS insulator_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'insulator_binding_site';
> 
> --- ************************************************
> --- *** relation: enhancer_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A protein_binding_site located within an ***
> --- ***  enhancer.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW enhancer_binding_site AS
>   SELECT
>     feature_id AS enhancer_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'enhancer_binding_site';
> 
> --- ************************************************
> --- *** relation: contig_collection ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A collection of contigs.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW contig_collection AS
>   SELECT
>     feature_id AS contig_collection_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'contig_collection';
> 
> --- ************************************************
> --- *** relation: lincrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A multiexonic non-coding RNA transcribed ***
> --- ***  by RNA polymerase II.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW lincrna AS
>   SELECT
>     feature_id AS lincrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'lincRNA';
> 
> --- ************************************************
> --- *** relation: ust ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An EST spanning part or all of the untra ***
> --- *** nslated regions of a protein-coding tran ***
> --- *** script.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW ust AS
>   SELECT
>     feature_id AS ust_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_UST' OR cvterm.name = 'five_prime_UST' OR cvterm.name = 'UST';
> 
> --- ************************************************
> --- *** relation: three_prime_ust ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A UST located in the 3'UTR of a protein- ***
> --- *** coding transcript.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_ust AS
>   SELECT
>     feature_id AS three_prime_ust_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_UST';
> 
> --- ************************************************
> --- *** relation: five_prime_ust ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An UST located in the 5'UTR of a protein ***
> --- *** -coding transcript.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_ust AS
>   SELECT
>     feature_id AS five_prime_ust_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_UST';
> 
> --- ************************************************
> --- *** relation: rst ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tag produced from a single sequencing  ***
> --- *** read from a RACE product; typically a fe ***
> --- *** w hundred base pairs long.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW rst AS
>   SELECT
>     feature_id AS rst_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_RST' OR cvterm.name = 'five_prime_RST' OR cvterm.name = 'RST';
> 
> --- ************************************************
> --- *** relation: three_prime_rst ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tag produced from a single sequencing  ***
> --- *** read from a 3'-RACE product; typically a ***
> --- ***  few hundred base pairs long.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_rst AS
>   SELECT
>     feature_id AS three_prime_rst_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_RST';
> 
> --- ************************************************
> --- *** relation: five_prime_rst ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tag produced from a single sequencing  ***
> --- *** read from a 5'-RACE product; typically a ***
> --- ***  few hundred base pairs long.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_rst AS
>   SELECT
>     feature_id AS five_prime_rst_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_RST';
> 
> --- ************************************************
> --- *** relation: ust_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A match against an UST sequence.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW ust_match AS
>   SELECT
>     feature_id AS ust_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'UST_match';
> 
> --- ************************************************
> --- *** relation: rst_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A match against an RST sequence.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW rst_match AS
>   SELECT
>     feature_id AS rst_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RST_match';
> 
> --- ************************************************
> --- *** relation: primer_match ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A nucleotide match to a primer sequence. ***
> --- ************************************************
> ---
> 
> CREATE VIEW primer_match AS
>   SELECT
>     feature_id AS primer_match_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'primer_match';
> 
> --- ************************************************
> --- *** relation: mirna_antiguide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of the pri miRNA that basepairs ***
> --- ***  with the guide to form the hairpin.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW mirna_antiguide AS
>   SELECT
>     feature_id AS mirna_antiguide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'miRNA_antiguide';
> 
> --- ************************************************
> --- *** relation: trans_splice_junction ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The boundary between the spliced leader  ***
> --- *** and the first exon of the mRNA.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW trans_splice_junction AS
>   SELECT
>     feature_id AS trans_splice_junction_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'trans_splice_junction';
> 
> --- ************************************************
> --- *** relation: outron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a primary transcript, that i ***
> --- *** s removed via trans splicing.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW outron AS
>   SELECT
>     feature_id AS outron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'outron';
> 
> --- ************************************************
> --- *** relation: natural_plasmid ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A plasmid that occurs naturally.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW natural_plasmid AS
>   SELECT
>     feature_id AS natural_plasmid_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'natural_transposable_element' OR cvterm.name = 'natural_plasmid';
> 
> --- ************************************************
> --- *** relation: gene_trap_construct ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene trap construct is a type of engin ***
> --- *** eered plasmid which is designed to integ ***
> --- *** rate into a genome and produce a fusion  ***
> --- *** transcript between exons of the gene int ***
> --- *** o which it inserts and a reporter elemen ***
> --- *** t in the construct. Gene traps contain a ***
> --- ***  splice acceptor, do not contain promote ***
> --- *** r elements for the reporter, and are mut ***
> --- *** agenic. Gene traps may be bicistronic wi ***
> --- *** th the second cassette containing a prom ***
> --- *** oter driving an a selectable marker.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_trap_construct AS
>   SELECT
>     feature_id AS gene_trap_construct_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_trap_construct';
> 
> --- ************************************************
> --- *** relation: promoter_trap_construct ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A promoter trap construct is a type of e ***
> --- *** ngineered plasmid which is designed to i ***
> --- *** ntegrate into a genome and express a rep ***
> --- *** orter when inserted in close proximity t ***
> --- *** o a promoter element. Promoter traps typ ***
> --- *** ically do not contain promoter elements  ***
> --- *** and are mutagenic.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW promoter_trap_construct AS
>   SELECT
>     feature_id AS promoter_trap_construct_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'promoter_trap_construct';
> 
> --- ************************************************
> --- *** relation: enhancer_trap_construct ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An enhancer trap construct is a type of  ***
> --- *** engineered plasmid which is designed to  ***
> --- *** integrate into a genome and express a re ***
> --- *** porter when the expression from a basic  ***
> --- *** minimal promoter is enhanced by genomic  ***
> --- *** enhancer elements. Enhancer traps contai ***
> --- *** n promoter elements and are not usually  ***
> --- *** mutagenic.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW enhancer_trap_construct AS
>   SELECT
>     feature_id AS enhancer_trap_construct_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'enhancer_trap_construct';
> 
> --- ************************************************
> --- *** relation: pac_end ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of sequence from the end of a P ***
> --- *** AC clone that may provide anhighly speci ***
> --- *** fic marker.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW pac_end AS
>   SELECT
>     feature_id AS pac_end_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'PAC_end';
> 
> --- ************************************************
> --- *** relation: rapd ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** RAPD is a 'PCR product' where a sequence ***
> --- ***  variant is identified through the use o ***
> --- *** f PCR with random primers.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW rapd AS
>   SELECT
>     feature_id AS rapd_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'RAPD';
> 
> --- ************************************************
> --- *** relation: shadow_enhancer ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW shadow_enhancer AS
>   SELECT
>     feature_id AS shadow_enhancer_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'shadow_enhancer';
> 
> --- ************************************************
> --- *** relation: regulatory_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA sequence that controls the express ***
> --- *** ion of a gene.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW regulatory_region AS
>   SELECT
>     feature_id AS regulatory_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'attenuator' OR cvterm.name = 'terminator' OR cvterm.name = 'TF_binding_site' OR cvterm.name = 'polyA_signal_sequence' OR cvterm.name = 'gene_group_regulatory_region' OR cvterm.name = 'transcriptional_cis_regulatory_region' OR cvterm.name = 'splicing_regulatory_region' OR cvterm.name = 'cis_regulatory_frameshift_element' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'eukaryotic_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'terminator_of_type_2_RNApol_III_promoter' OR cvterm.name = 'INR_motif' OR cvterm.name = 'DPE_motif' OR cvterm.name = 'BRE_motif' OR cvterm.name = 'CAAT_signal' OR cvterm.name = 'TATA_box' OR cvterm.name = 'A_box' OR cvterm.name = 'B_box' OR cvterm.name = 'C_box' OR cvterm.name = 'DRE_motif' OR cvterm.name = 'E_box_motif' OR cvterm.name = 'MTE' OR cvterm.name = 'INR1_motif' OR cvterm.name = 'GAGA_motif' OR cvterm.name = 'octamer_motif' OR cvterm.name = 'operator' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'bacterial_terminator' OR cvterm.name = 'rho_dependent_bacterial_terminator' OR cvterm.name = 'rho_independent_bacterial_terminator' OR cvterm.name = 'promoter' OR cvterm.name = 'insulator' OR cvterm.name = 'CRM' OR cvterm.name = 'promoter_targeting_sequence' OR cvterm.name = 'bidirectional_promoter' OR cvterm.name = 'RNA_polymerase_promoter' OR cvterm.name = 'RNApol_I_promoter' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'bacterial_RNApol_promoter' OR cvterm.name = 'Phage_RNA_Polymerase_Promoter' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'SP6_RNA_Polymerase_Promoter' OR cvterm.name = 'T3_RNA_Polymerase_Promoter' OR cvterm.name = 'T7_RNA_Polymerase_Promoter' OR cvterm.name = 'locus_control_region' OR cvterm.name = 'enhancer' OR cvterm.name = 'RNApol_II_promoter' OR cvterm.name = 'RNApol_III_promoter' OR cvterm.name = 'silencer' OR cvterm.name = 'enhancer_bound_by_factor' OR cvterm.name = 'shadow_enhancer' OR cvterm.name = 'RNApol_III_promoter_type_1' OR cvterm.name = 'RNApol_III_promoter_type_2' OR cvterm.name = 'RNApol_III_promoter_type_3' OR cvterm.name = 'splice_enhancer' OR cvterm.name = 'intronic_splice_enhancer' OR cvterm.name = 'exonic_splice_enhancer' OR cvterm.name = 'regulatory_region';
> 
> --- ************************************************
> --- *** relation: u14_snorna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The primary transcript of an evolutionar ***
> --- *** ily conserved eukaryotic low molecular w ***
> --- *** eight RNA capable of intermolecular hybr ***
> --- *** idization with both homologous and heter ***
> --- *** ologous 18S rRNA.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW u14_snorna_primary_transcript AS
>   SELECT
>     feature_id AS u14_snorna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'U14_snoRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: methylation_guide_snorna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A snoRNA that specifies the site of 2'-O ***
> --- *** -ribose methylation in an RNA molecule b ***
> --- *** y base pairing with a short sequence aro ***
> --- *** und the target residue.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW methylation_guide_snorna AS
>   SELECT
>     feature_id AS methylation_guide_snorna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'methylation_guide_snoRNA';
> 
> --- ************************************************
> --- *** relation: rrna_cleavage_rna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An ncRNA that is part of a ribonucleopro ***
> --- *** tein that cleaves the primary pre-rRNA t ***
> --- *** ranscript in the process of producing ma ***
> --- *** ture rRNA molecules.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW rrna_cleavage_rna AS
>   SELECT
>     feature_id AS rrna_cleavage_rna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'rRNA_cleavage_RNA';
> 
> --- ************************************************
> --- *** relation: exon_of_single_exon_gene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An exon that is the only exon in a gene. ***
> --- ************************************************
> ---
> 
> CREATE VIEW exon_of_single_exon_gene AS
>   SELECT
>     feature_id AS exon_of_single_exon_gene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'exon_of_single_exon_gene';
> 
> --- ************************************************
> --- *** relation: cassette_array_member ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW cassette_array_member AS
>   SELECT
>     feature_id AS cassette_array_member_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cassette_array_member';
> 
> --- ************************************************
> --- *** relation: gene_cassette_member ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_cassette_member AS
>   SELECT
>     feature_id AS gene_cassette_member_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cassette_array_member' OR cvterm.name = 'gene_cassette_member';
> 
> --- ************************************************
> --- *** relation: gene_subarray_member ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_subarray_member AS
>   SELECT
>     feature_id AS gene_subarray_member_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_subarray_member';
> 
> --- ************************************************
> --- *** relation: primer_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Non-covalent primer binding site for ini ***
> --- *** tiation of replication, transcription, o ***
> --- *** r reverse transcription.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW primer_binding_site AS
>   SELECT
>     feature_id AS primer_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'primer_binding_site';
> 
> --- ************************************************
> --- *** relation: gene_array ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An array includes two or more genes, or  ***
> --- *** two or more gene subarrays, contiguously ***
> --- ***  arranged where the individual genes, or ***
> --- ***  subarrays, are either identical in sequ ***
> --- *** ence, or essentially so.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_array AS
>   SELECT
>     feature_id AS gene_array_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_array';
> 
> --- ************************************************
> --- *** relation: gene_subarray ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A subarray is, by defintition, a member  ***
> --- *** of a gene array (SO:0005851); the member ***
> --- *** s of a subarray may differ substantially ***
> --- ***  in sequence, but are closely related in ***
> --- ***  function.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_subarray AS
>   SELECT
>     feature_id AS gene_subarray_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_subarray';
> 
> --- ************************************************
> --- *** relation: gene_cassette ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that can be substituted for a rel ***
> --- *** ated gene at a different site in the gen ***
> --- *** ome.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_cassette AS
>   SELECT
>     feature_id AS gene_cassette_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_cassette';
> 
> --- ************************************************
> --- *** relation: gene_cassette_array ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An array of non-functional genes whose m ***
> --- *** embers, when captured by recombination f ***
> --- *** orm functional genes.                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_cassette_array AS
>   SELECT
>     feature_id AS gene_cassette_array_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_cassette_array';
> 
> --- ************************************************
> --- *** relation: gene_group ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A collection of related genes.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_group AS
>   SELECT
>     feature_id AS gene_group_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'operon' OR cvterm.name = 'gene_array' OR cvterm.name = 'gene_subarray' OR cvterm.name = 'gene_cassette_array' OR cvterm.name = 'regulon' OR cvterm.name = 'gene_group';
> 
> --- ************************************************
> --- *** relation: selenocysteine_trna_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript encoding seryl tRNA ***
> --- ***  (SO:000269).                            ***
> --- ************************************************
> ---
> 
> CREATE VIEW selenocysteine_trna_primary_transcript AS
>   SELECT
>     feature_id AS selenocysteine_trna_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'selenocysteine_tRNA_primary_transcript';
> 
> --- ************************************************
> --- *** relation: selenocysteinyl_trna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A tRNA sequence that has a selenocystein ***
> --- *** e anticodon, and a 3' selenocysteine bin ***
> --- *** ding region.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW selenocysteinyl_trna AS
>   SELECT
>     feature_id AS selenocysteinyl_trna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'selenocysteinyl_tRNA';
> 
> --- ************************************************
> --- *** relation: syntenic_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region in which two or more pairs of h ***
> --- *** omologous markers occur on the same chro ***
> --- *** mosome in two or more species.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW syntenic_region AS
>   SELECT
>     feature_id AS syntenic_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'syntenic_region';
> 
> --- ************************************************
> --- *** relation: biochemical_region_of_peptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of a peptide that is involved i ***
> --- *** n a biochemical function.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW biochemical_region_of_peptide AS
>   SELECT
>     feature_id AS biochemical_region_of_peptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'post_translationally_modified_region' OR cvterm.name = 'conformational_switch' OR cvterm.name = 'molecular_contact_region' OR cvterm.name = 'polypeptide_binding_motif' OR cvterm.name = 'polypeptide_catalytic_motif' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'biochemical_region_of_peptide';
> 
> --- ************************************************
> --- *** relation: molecular_contact_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region that is involved a contact with ***
> --- ***  another molecule.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW molecular_contact_region AS
>   SELECT
>     feature_id AS molecular_contact_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'molecular_contact_region';
> 
> --- ************************************************
> --- *** relation: intrinsically_unstructured_polypeptide_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A region of polypeptide chain with high  ***
> --- *** conformational flexibility.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW intrinsically_unstructured_polypeptide_region AS
>   SELECT
>     feature_id AS intrinsically_unstructured_polypeptide_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'intrinsically_unstructured_polypeptide_region';
> 
> --- ************************************************
> --- *** relation: catmat_left_handed_three ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of 3 consecutive residues with d ***
> --- *** ihedral angles as follows: res i: phi -9 ***
> --- *** 0 bounds -120 to -60, res i: psi -10 bou ***
> --- *** nds -50 to 30, res i+1: phi -75 bounds - ***
> --- *** 100 to -50, res i+1: psi 140 bounds 110  ***
> --- *** to 170. An extra restriction of the leng ***
> --- *** th of the O to O distance would be usefu ***
> --- *** l, that it be less than 5 Angstrom. More ***
> --- ***  precisely these two oxygens are the mai ***
> --- *** n chain carbonyl oxygen atoms of residue ***
> --- *** s i-1 and i+1.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW catmat_left_handed_three AS
>   SELECT
>     feature_id AS catmat_left_handed_three_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'catmat_left_handed_three';
> 
> --- ************************************************
> --- *** relation: catmat_left_handed_four ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of 4 consecutive residues with d ***
> --- *** ihedral angles as follows: res i: phi -9 ***
> --- *** 0 bounds -120 to -60, res i psi -10 boun ***
> --- *** ds -50 to 30, res i+1: phi -90 bounds -1 ***
> --- *** 20 to -60, res i+1: psi -10 bounds -50 t ***
> --- *** o 30, res i+2: phi -75 bounds -100 to -5 ***
> --- *** 0, res i+2: psi 140 bounds 110 to 170.   ***
> --- *** The extra restriction of the length of t ***
> --- *** he O to O distance is similar, that it b ***
> --- *** e less than 5 Angstrom. In this case the ***
> --- *** se two Oxygen atoms are the main chain c ***
> --- *** arbonyl oxygen atoms of residues i-1 and ***
> --- ***  i+2.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW catmat_left_handed_four AS
>   SELECT
>     feature_id AS catmat_left_handed_four_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'catmat_left_handed_four';
> 
> --- ************************************************
> --- *** relation: catmat_right_handed_three ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of 3 consecutive residues with d ***
> --- *** ihedral angles as follows: res i: phi -9 ***
> --- *** 0 bounds -120 to -60, res i: psi -10 bou ***
> --- *** nds -50 to 30, res i+1: phi -75 bounds - ***
> --- *** 100 to -50, res i+1: psi 140 bounds 110  ***
> --- *** to 170. An extra restriction of the leng ***
> --- *** th of the O to O distance would be usefu ***
> --- *** l, that it be less than 5 Angstrom. More ***
> --- ***  precisely these two oxygens are the mai ***
> --- *** n chain carbonyl oxygen atoms of residue ***
> --- *** s i-1 and i+1.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW catmat_right_handed_three AS
>   SELECT
>     feature_id AS catmat_right_handed_three_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'catmat_right_handed_three';
> 
> --- ************************************************
> --- *** relation: catmat_right_handed_four ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of 4 consecutive residues with d ***
> --- *** ihedral angles as follows: res i: phi -9 ***
> --- *** 0 bounds -120 to -60, res i: psi -10 bou ***
> --- *** nds -50 to 30, res i+1: phi -90 bounds - ***
> --- *** 120 to -60, res i+1: psi -10 bounds -50  ***
> --- *** to 30, res i+2: phi -75 bounds -100 to - ***
> --- *** 50, res i+2: psi 140 bounds 110 to 170.  ***
> --- *** The extra restriction of the length of t ***
> --- *** he O to O distance is similar, that it b ***
> --- *** e less than 5 Angstrom. In this case the ***
> --- *** se two Oxygen atoms are the main chain c ***
> --- *** arbonyl oxygen atoms of residues i-1 and ***
> --- ***  i+2.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW catmat_right_handed_four AS
>   SELECT
>     feature_id AS catmat_right_handed_four_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'catmat_right_handed_four';
> 
> --- ************************************************
> --- *** relation: alpha_beta_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A motif of five consecutive residues and ***
> --- ***  two H-bonds in which: H-bond between CO ***
> --- ***  of residue(i) and NH of residue(i+4), H ***
> --- *** -bond between CO of residue(i) and NH of ***
> --- ***  residue(i+3),Phi angles of residues(i+1 ***
> --- *** ), (i+2) and (i+3) are negative.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW alpha_beta_motif AS
>   SELECT
>     feature_id AS alpha_beta_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alpha_beta_motif';
> 
> --- ************************************************
> --- *** relation: lipoprotein_signal_peptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A peptide that acts as a signal for both ***
> --- ***  membrane translocation and lipid attach ***
> --- *** ment in prokaryotes.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW lipoprotein_signal_peptide AS
>   SELECT
>     feature_id AS lipoprotein_signal_peptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'lipoprotein_signal_peptide';
> 
> --- ************************************************
> --- *** relation: no_output ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An experimental region wherean analysis  ***
> --- *** has been run and not produced any annota ***
> --- *** tion.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW no_output AS
>   SELECT
>     feature_id AS no_output_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'no_output';
> 
> --- ************************************************
> --- *** relation: cleaved_peptide_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The cleaved_peptide_regon is the a regio ***
> --- *** n of peptide sequence that is cleaved du ***
> --- *** ring maturation.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW cleaved_peptide_region AS
>   SELECT
>     feature_id AS cleaved_peptide_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'signal_peptide' OR cvterm.name = 'cleaved_initiator_methionine' OR cvterm.name = 'transit_peptide' OR cvterm.name = 'intein' OR cvterm.name = 'propeptide_cleavage_site' OR cvterm.name = 'propeptide' OR cvterm.name = 'cleaved_for_gpi_anchor_region' OR cvterm.name = 'lipoprotein_signal_peptide' OR cvterm.name = 'n_terminal_region' OR cvterm.name = 'c_terminal_region' OR cvterm.name = 'central_hydrophobic_region_of_signal_peptide' OR cvterm.name = 'cleaved_peptide_region';
> 
> --- ************************************************
> --- *** relation: peptide_coil ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Irregular, unstructured regions of a pro ***
> --- *** tein's backbone, as distinct from the re ***
> --- *** gular region (namely alpha helix and bet ***
> --- *** a strand - characterised by specific pat ***
> --- *** terns of main-chain hydrogen bonds).     ***
> --- ************************************************
> ---
> 
> CREATE VIEW peptide_coil AS
>   SELECT
>     feature_id AS peptide_coil_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'peptide_coil';
> 
> --- ************************************************
> --- *** relation: hydrophobic_region_of_peptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Hydrophobic regions are regions with a l ***
> --- *** ow affinity for water.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW hydrophobic_region_of_peptide AS
>   SELECT
>     feature_id AS hydrophobic_region_of_peptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'hydrophobic_region_of_peptide';
> 
> --- ************************************************
> --- *** relation: n_terminal_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The amino-terminal positively-charged re ***
> --- *** gion of a signal peptide (approx 1-5 aa) ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW n_terminal_region AS
>   SELECT
>     feature_id AS n_terminal_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'n_terminal_region';
> 
> --- ************************************************
> --- *** relation: c_terminal_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The more polar, carboxy-terminal region  ***
> --- *** of the signal peptide (approx 3-7 aa).   ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_terminal_region AS
>   SELECT
>     feature_id AS c_terminal_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'c_terminal_region';
> 
> --- ************************************************
> --- *** relation: central_hydrophobic_region_of_signal_peptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The central, hydrophobic region of the s ***
> --- *** ignal peptide (approx 7-15 aa).          ***
> --- ************************************************
> ---
> 
> CREATE VIEW central_hydrophobic_region_of_signal_peptide AS
>   SELECT
>     feature_id AS central_hydrophobic_region_of_signal_peptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'central_hydrophobic_region_of_signal_peptide';
> 
> --- ************************************************
> --- *** relation: polypeptide_conserved_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A conserved motif is a short (up to 20 a ***
> --- *** mino acids) region of biological interes ***
> --- *** t that is conserved in different protein ***
> --- *** s. They may or may not have functional o ***
> --- *** r structural significance within the pro ***
> --- *** teins in which they are found.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_conserved_motif AS
>   SELECT
>     feature_id AS polypeptide_conserved_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_conserved_motif';
> 
> --- ************************************************
> --- *** relation: polypeptide_binding_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A polypeptide binding motif is a short ( ***
> --- *** up to 20 amino acids) polypeptide region ***
> --- ***  of biological interest that contains on ***
> --- *** e or more amino acids experimentally sho ***
> --- *** wn to bind to a ligand.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_binding_motif AS
>   SELECT
>     feature_id AS polypeptide_binding_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_binding_motif';
> 
> --- ************************************************
> --- *** relation: polypeptide_catalytic_motif ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A polypeptide catalytic motif is a short ***
> --- ***  (up to 20 amino acids) polypeptide regi ***
> --- *** on that contains one or more active site ***
> --- ***  residues.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_catalytic_motif AS
>   SELECT
>     feature_id AS polypeptide_catalytic_motif_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_catalytic_motif';
> 
> --- ************************************************
> --- *** relation: polypeptide_dna_contact ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Residues involved in interactions with D ***
> --- *** NA.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_dna_contact AS
>   SELECT
>     feature_id AS polypeptide_dna_contact_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_DNA_contact';
> 
> --- ************************************************
> --- *** relation: polypeptide_conserved_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A subsection of sequence with biological ***
> --- ***  interest that is conserved in different ***
> --- ***  proteins. They may or may not have func ***
> --- *** tional or structural significance within ***
> --- ***  the proteins in which they are found.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW polypeptide_conserved_region AS
>   SELECT
>     feature_id AS polypeptide_conserved_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'polypeptide_domain' OR cvterm.name = 'polypeptide_motif' OR cvterm.name = 'polypeptide_repeat' OR cvterm.name = 'biochemical_region_of_peptide' OR cvterm.name = 'polypeptide_conserved_motif' OR cvterm.name = 'post_translationally_modified_region' OR cvterm.name = 'conformational_switch' OR cvterm.name = 'molecular_contact_region' OR cvterm.name = 'polypeptide_binding_motif' OR cvterm.name = 'polypeptide_catalytic_motif' OR cvterm.name = 'polypeptide_metal_contact' OR cvterm.name = 'protein_protein_contact' OR cvterm.name = 'polypeptide_ligand_contact' OR cvterm.name = 'polypeptide_DNA_contact' OR cvterm.name = 'polypeptide_calcium_ion_contact_site' OR cvterm.name = 'polypeptide_cobalt_ion_contact_site' OR cvterm.name = 'polypeptide_copper_ion_contact_site' OR cvterm.name = 'polypeptide_iron_ion_contact_site' OR cvterm.name = 'polypeptide_magnesium_ion_contact_site' OR cvterm.name = 'polypeptide_manganese_ion_contact_site' OR cvterm.name = 'polypeptide_molybdenum_ion_contact_site' OR cvterm.name = 'polypeptide_nickel_ion_contact_site' OR cvterm.name = 'polypeptide_tungsten_ion_contact_site' OR cvterm.name = 'polypeptide_zinc_ion_contact_site' OR cvterm.name = 'polypeptide_conserved_region';
> 
> --- ************************************************
> --- *** relation: substitution ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Any change in genomic DNA caused by a si ***
> --- *** ngle event.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW substitution AS
>   SELECT
>     feature_id AS substitution_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_length_variation' OR cvterm.name = 'SNP' OR cvterm.name = 'complex_substitution' OR cvterm.name = 'point_mutation' OR cvterm.name = 'simple_sequence_length_variation' OR cvterm.name = 'MNP' OR cvterm.name = 'transition' OR cvterm.name = 'transversion' OR cvterm.name = 'pyrimidine_transition' OR cvterm.name = 'purine_transition' OR cvterm.name = 'C_to_T_transition' OR cvterm.name = 'T_to_C_transition' OR cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'A_to_G_transition' OR cvterm.name = 'G_to_A_transition' OR cvterm.name = 'pyrimidine_to_purine_transversion' OR cvterm.name = 'purine_to_pyrimidine_transversion' OR cvterm.name = 'C_to_A_transversion' OR cvterm.name = 'C_to_G_transversion' OR cvterm.name = 'T_to_A_transversion' OR cvterm.name = 'T_to_G_transversion' OR cvterm.name = 'A_to_C_transversion' OR cvterm.name = 'A_to_T_transversion' OR cvterm.name = 'G_to_C_transversion' OR cvterm.name = 'G_to_T_transversion' OR cvterm.name = 'substitution';
> 
> --- ************************************************
> --- *** relation: partially_characterised_change_in_dna_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The nature of the mutation event is only ***
> --- ***  partially characterised.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW partially_characterised_change_in_dna_sequence AS
>   SELECT
>     feature_id AS partially_characterised_change_in_dna_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'partially_characterised_change_in_DNA_sequence';
> 
> --- ************************************************
> --- *** relation: complex_substitution ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** When no simple or well defined DNA mutat ***
> --- *** ion event describes the observed DNA cha ***
> --- *** nge, the keyword "complex" should be use ***
> --- *** d. Usually there are multiple equally pl ***
> --- *** ausible explanations for the change.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW complex_substitution AS
>   SELECT
>     feature_id AS complex_substitution_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'MNP' OR cvterm.name = 'complex_substitution';
> 
> --- ************************************************
> --- *** relation: uncharacterised_change_in_nucleotide_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The nature of the mutation event is eith ***
> --- *** er uncharacterised or only partially cha ***
> --- *** racterised.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW uncharacterised_change_in_nucleotide_sequence AS
>   SELECT
>     feature_id AS uncharacterised_change_in_nucleotide_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'partially_characterised_change_in_DNA_sequence' OR cvterm.name = 'uncharacterised_change_in_nucleotide_sequence';
> 
> --- ************************************************
> --- *** relation: point_mutation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A single nucleotide change which has occ ***
> --- *** urred at the same position of a correspo ***
> --- *** nding nucleotide in a reference sequence ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW point_mutation AS
>   SELECT
>     feature_id AS point_mutation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'transition' OR cvterm.name = 'transversion' OR cvterm.name = 'pyrimidine_transition' OR cvterm.name = 'purine_transition' OR cvterm.name = 'C_to_T_transition' OR cvterm.name = 'T_to_C_transition' OR cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'A_to_G_transition' OR cvterm.name = 'G_to_A_transition' OR cvterm.name = 'pyrimidine_to_purine_transversion' OR cvterm.name = 'purine_to_pyrimidine_transversion' OR cvterm.name = 'C_to_A_transversion' OR cvterm.name = 'C_to_G_transversion' OR cvterm.name = 'T_to_A_transversion' OR cvterm.name = 'T_to_G_transversion' OR cvterm.name = 'A_to_C_transversion' OR cvterm.name = 'A_to_T_transversion' OR cvterm.name = 'G_to_C_transversion' OR cvterm.name = 'G_to_T_transversion' OR cvterm.name = 'point_mutation';
> 
> --- ************************************************
> --- *** relation: transition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Change of a pyrimidine nucleotide, C or  ***
> --- *** T, into an other pyrimidine nucleotide,  ***
> --- *** or change of a purine nucleotide, A or G ***
> --- *** , into an other purine nucleotide.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW transition AS
>   SELECT
>     feature_id AS transition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pyrimidine_transition' OR cvterm.name = 'purine_transition' OR cvterm.name = 'C_to_T_transition' OR cvterm.name = 'T_to_C_transition' OR cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'A_to_G_transition' OR cvterm.name = 'G_to_A_transition' OR cvterm.name = 'transition';
> 
> --- ************************************************
> --- *** relation: pyrimidine_transition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A substitution of a pyrimidine, C or T,  ***
> --- *** for another pyrimidine.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW pyrimidine_transition AS
>   SELECT
>     feature_id AS pyrimidine_transition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_to_T_transition' OR cvterm.name = 'T_to_C_transition' OR cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'pyrimidine_transition';
> 
> --- ************************************************
> --- *** relation: c_to_t_transition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transition of a cytidine to a thymine. ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_to_t_transition AS
>   SELECT
>     feature_id AS c_to_t_transition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_to_T_transition_at_pCpG_site' OR cvterm.name = 'C_to_T_transition';
> 
> --- ************************************************
> --- *** relation: c_to_t_transition_at_pcpg_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The transition of cytidine to thymine oc ***
> --- *** curring at a pCpG site as a consequence  ***
> --- *** of the spontaneous deamination of 5'-met ***
> --- *** hylcytidine.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_to_t_transition_at_pcpg_site AS
>   SELECT
>     feature_id AS c_to_t_transition_at_pcpg_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_to_T_transition_at_pCpG_site';
> 
> --- ************************************************
> --- *** relation: t_to_c_transition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW t_to_c_transition AS
>   SELECT
>     feature_id AS t_to_c_transition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'T_to_C_transition';
> 
> --- ************************************************
> --- *** relation: purine_transition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A substitution of a purine, A or G, for  ***
> --- *** another purine.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW purine_transition AS
>   SELECT
>     feature_id AS purine_transition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'A_to_G_transition' OR cvterm.name = 'G_to_A_transition' OR cvterm.name = 'purine_transition';
> 
> --- ************************************************
> --- *** relation: a_to_g_transition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transition of an adenine to a guanine. ***
> --- ************************************************
> ---
> 
> CREATE VIEW a_to_g_transition AS
>   SELECT
>     feature_id AS a_to_g_transition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'A_to_G_transition';
> 
> --- ************************************************
> --- *** relation: g_to_a_transition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transition of a guanine to an adenine. ***
> --- ************************************************
> ---
> 
> CREATE VIEW g_to_a_transition AS
>   SELECT
>     feature_id AS g_to_a_transition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'G_to_A_transition';
> 
> --- ************************************************
> --- *** relation: transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Change of a pyrimidine nucleotide, C or  ***
> --- *** T, into a purine nucleotide, A or G, or  ***
> --- *** vice versa.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW transversion AS
>   SELECT
>     feature_id AS transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pyrimidine_to_purine_transversion' OR cvterm.name = 'purine_to_pyrimidine_transversion' OR cvterm.name = 'C_to_A_transversion' OR cvterm.name = 'C_to_G_transversion' OR cvterm.name = 'T_to_A_transversion' OR cvterm.name = 'T_to_G_transversion' OR cvterm.name = 'A_to_C_transversion' OR cvterm.name = 'A_to_T_transversion' OR cvterm.name = 'G_to_C_transversion' OR cvterm.name = 'G_to_T_transversion' OR cvterm.name = 'transversion';
> 
> --- ************************************************
> --- *** relation: pyrimidine_to_purine_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Change of a pyrimidine nucleotide, C or  ***
> --- *** T, into a purine nucleotide, A or G.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW pyrimidine_to_purine_transversion AS
>   SELECT
>     feature_id AS pyrimidine_to_purine_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_to_A_transversion' OR cvterm.name = 'C_to_G_transversion' OR cvterm.name = 'T_to_A_transversion' OR cvterm.name = 'T_to_G_transversion' OR cvterm.name = 'pyrimidine_to_purine_transversion';
> 
> --- ************************************************
> --- *** relation: c_to_a_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transversion from cytidine to adenine. ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_to_a_transversion AS
>   SELECT
>     feature_id AS c_to_a_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_to_A_transversion';
> 
> --- ************************************************
> --- *** relation: c_to_g_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW c_to_g_transversion AS
>   SELECT
>     feature_id AS c_to_g_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'C_to_G_transversion';
> 
> --- ************************************************
> --- *** relation: t_to_a_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transversion from T to A.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW t_to_a_transversion AS
>   SELECT
>     feature_id AS t_to_a_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'T_to_A_transversion';
> 
> --- ************************************************
> --- *** relation: t_to_g_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transversion from T to G.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW t_to_g_transversion AS
>   SELECT
>     feature_id AS t_to_g_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'T_to_G_transversion';
> 
> --- ************************************************
> --- *** relation: purine_to_pyrimidine_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Change of a purine nucleotide, A or G ,  ***
> --- *** into a pyrimidine nucleotide C or T.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW purine_to_pyrimidine_transversion AS
>   SELECT
>     feature_id AS purine_to_pyrimidine_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'A_to_C_transversion' OR cvterm.name = 'A_to_T_transversion' OR cvterm.name = 'G_to_C_transversion' OR cvterm.name = 'G_to_T_transversion' OR cvterm.name = 'purine_to_pyrimidine_transversion';
> 
> --- ************************************************
> --- *** relation: a_to_c_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transversion from adenine to cytidine. ***
> --- ************************************************
> ---
> 
> CREATE VIEW a_to_c_transversion AS
>   SELECT
>     feature_id AS a_to_c_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'A_to_C_transversion';
> 
> --- ************************************************
> --- *** relation: a_to_t_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transversion from adenine to thymine.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW a_to_t_transversion AS
>   SELECT
>     feature_id AS a_to_t_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'A_to_T_transversion';
> 
> --- ************************************************
> --- *** relation: g_to_c_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transversion from guanine to cytidine. ***
> --- ************************************************
> ---
> 
> CREATE VIEW g_to_c_transversion AS
>   SELECT
>     feature_id AS g_to_c_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'G_to_C_transversion';
> 
> --- ************************************************
> --- *** relation: g_to_t_transversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transversion from guanine to thymine.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW g_to_t_transversion AS
>   SELECT
>     feature_id AS g_to_t_transversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'G_to_T_transversion';
> 
> --- ************************************************
> --- *** relation: intrachromosomal_mutation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW intrachromosomal_mutation AS
>   SELECT
>     feature_id AS intrachromosomal_mutation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromosomal_deletion' OR cvterm.name = 'chromosomal_inversion' OR cvterm.name = 'intrachromosomal_duplication' OR cvterm.name = 'ring_chromosome' OR cvterm.name = 'chromosome_fission' OR cvterm.name = 'inversion_derived_bipartite_deficiency' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_aneuploid' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'inverted_ring_chromosome' OR cvterm.name = 'pericentric_inversion' OR cvterm.name = 'paracentric_inversion' OR cvterm.name = 'inversion_cum_translocation' OR cvterm.name = 'bipartite_inversion' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_bipartite_duplication' OR cvterm.name = 'inversion_derived_duplication_plus_aneuploid' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'tandem_duplication' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'direct_tandem_duplication' OR cvterm.name = 'inverted_tandem_duplication' OR cvterm.name = 'inverted_ring_chromosome' OR cvterm.name = 'free_ring_duplication' OR cvterm.name = 'intrachromosomal_mutation';
> 
> --- ************************************************
> --- *** relation: chromosomal_deletion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An incomplete chromosome.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosomal_deletion AS
>   SELECT
>     feature_id AS chromosomal_deletion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_derived_bipartite_deficiency' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_aneuploid' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'chromosomal_deletion';
> 
> --- ************************************************
> --- *** relation: chromosomal_inversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosomal_inversion AS
>   SELECT
>     feature_id AS chromosomal_inversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inverted_ring_chromosome' OR cvterm.name = 'pericentric_inversion' OR cvterm.name = 'paracentric_inversion' OR cvterm.name = 'inversion_cum_translocation' OR cvterm.name = 'bipartite_inversion' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'chromosomal_inversion';
> 
> --- ************************************************
> --- *** relation: interchromosomal_mutation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW interchromosomal_mutation AS
>   SELECT
>     feature_id AS interchromosomal_mutation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromosomal_translocation' OR cvterm.name = 'bipartite_duplication' OR cvterm.name = 'interchromosomal_transposition' OR cvterm.name = 'translocation_element' OR cvterm.name = 'Robertsonian_fusion' OR cvterm.name = 'reciprocal_chromosomal_translocation' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'inversion_cum_translocation' OR cvterm.name = 'cyclic_translocation' OR cvterm.name = 'deficient_interchromosomal_transposition' OR cvterm.name = 'inverted_interchromosomal_transposition' OR cvterm.name = 'uninverted_interchromosomal_transposition' OR cvterm.name = 'unorientated_interchromosomal_transposition' OR cvterm.name = 'interchromosomal_mutation';
> 
> --- ************************************************
> --- *** relation: indel ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A hybrid term (insertion/deletion) to de ***
> --- *** scribe sequence length change when the d ***
> --- *** irection of the change is unspecified.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW indel AS
>   SELECT
>     feature_id AS indel_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nucleotide_deletion' OR cvterm.name = 'nucleotide_insertion' OR cvterm.name = 'nucleotide_duplication' OR cvterm.name = 'indel';
> 
> --- ************************************************
> --- *** relation: nucleotide_deletion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** One or more continuous nucleotides are e ***
> --- *** xcised from the sequence.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW nucleotide_deletion AS
>   SELECT
>     feature_id AS nucleotide_deletion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nucleotide_deletion';
> 
> --- ************************************************
> --- *** relation: nucleotide_insertion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** One or more nucleotides are added betwee ***
> --- *** n two adjacent nucleotides in the sequen ***
> --- *** ce.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW nucleotide_insertion AS
>   SELECT
>     feature_id AS nucleotide_insertion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nucleotide_duplication' OR cvterm.name = 'nucleotide_insertion';
> 
> --- ************************************************
> --- *** relation: nucleotide_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** One or more nucleotides are added betwee ***
> --- *** n two adjacent nucleotides in the sequen ***
> --- *** ce; the inserted sequence derives from,  ***
> --- *** or is identical in sequence to, nucleoti ***
> --- *** des adjacent to insertion point.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW nucleotide_duplication AS
>   SELECT
>     feature_id AS nucleotide_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'nucleotide_duplication';
> 
> --- ************************************************
> --- *** relation: inversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A continuous nucleotide sequence is inve ***
> --- *** rted in the same position.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion AS
>   SELECT
>     feature_id AS inversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion';
> 
> --- ************************************************
> --- *** relation: chromosomal_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An extra chromosome.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosomal_duplication AS
>   SELECT
>     feature_id AS chromosomal_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'interchromosomal_duplication' OR cvterm.name = 'intrachromosomal_duplication' OR cvterm.name = 'free_duplication' OR cvterm.name = 'insertional_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_bipartite_duplication' OR cvterm.name = 'inversion_derived_duplication_plus_aneuploid' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'tandem_duplication' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'direct_tandem_duplication' OR cvterm.name = 'inverted_tandem_duplication' OR cvterm.name = 'free_ring_duplication' OR cvterm.name = 'uninverted_insertional_duplication' OR cvterm.name = 'inverted_insertional_duplication' OR cvterm.name = 'unoriented_insertional_duplication' OR cvterm.name = 'chromosomal_duplication';
> 
> --- ************************************************
> --- *** relation: intrachromosomal_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW intrachromosomal_duplication AS
>   SELECT
>     feature_id AS intrachromosomal_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_bipartite_duplication' OR cvterm.name = 'inversion_derived_duplication_plus_aneuploid' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'tandem_duplication' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'direct_tandem_duplication' OR cvterm.name = 'inverted_tandem_duplication' OR cvterm.name = 'intrachromosomal_duplication';
> 
> --- ************************************************
> --- *** relation: direct_tandem_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW direct_tandem_duplication AS
>   SELECT
>     feature_id AS direct_tandem_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'direct_tandem_duplication';
> 
> --- ************************************************
> --- *** relation: inverted_tandem_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW inverted_tandem_duplication AS
>   SELECT
>     feature_id AS inverted_tandem_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inverted_tandem_duplication';
> 
> --- ************************************************
> --- *** relation: intrachromosomal_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW intrachromosomal_transposition AS
>   SELECT
>     feature_id AS intrachromosomal_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'intrachromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: compound_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW compound_chromosome AS
>   SELECT
>     feature_id AS compound_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'compound_chromosome_arm' OR cvterm.name = 'homo_compound_chromosome' OR cvterm.name = 'hetero_compound_chromosome' OR cvterm.name = 'compound_chromosome';
> 
> --- ************************************************
> --- *** relation: robertsonian_fusion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW robertsonian_fusion AS
>   SELECT
>     feature_id AS robertsonian_fusion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'Robertsonian_fusion';
> 
> --- ************************************************
> --- *** relation: chromosomal_translocation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosomal_translocation AS
>   SELECT
>     feature_id AS chromosomal_translocation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'translocation_element' OR cvterm.name = 'Robertsonian_fusion' OR cvterm.name = 'reciprocal_chromosomal_translocation' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'inversion_cum_translocation' OR cvterm.name = 'cyclic_translocation' OR cvterm.name = 'chromosomal_translocation';
> 
> --- ************************************************
> --- *** relation: ring_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW ring_chromosome AS
>   SELECT
>     feature_id AS ring_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inverted_ring_chromosome' OR cvterm.name = 'free_ring_duplication' OR cvterm.name = 'ring_chromosome';
> 
> --- ************************************************
> --- *** relation: pericentric_inversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW pericentric_inversion AS
>   SELECT
>     feature_id AS pericentric_inversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'pericentric_inversion';
> 
> --- ************************************************
> --- *** relation: paracentric_inversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW paracentric_inversion AS
>   SELECT
>     feature_id AS paracentric_inversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'paracentric_inversion';
> 
> --- ************************************************
> --- *** relation: reciprocal_chromosomal_translocation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW reciprocal_chromosomal_translocation AS
>   SELECT
>     feature_id AS reciprocal_chromosomal_translocation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'reciprocal_chromosomal_translocation';
> 
> --- ************************************************
> --- *** relation: sequence_variation_affecting_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Any change in mature, spliced and proces ***
> --- *** sed, RNA that results from a change in t ***
> --- *** he corresponding DNA sequence.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variation_affecting_transcript AS
>   SELECT
>     feature_id AS sequence_variation_affecting_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_no_change_in_transcript' OR cvterm.name = 'sequence_variation_affecting_complex_change_in_transcript' OR cvterm.name = 'sequence_variant_affecting_transcription' OR cvterm.name = 'sequence_variation_affecting_transcript_sequence' OR cvterm.name = 'sequence_variation_affecting_level_of_transcript' OR cvterm.name = 'sequence_variant_causing_uncharacterised_change_in_transcript' OR cvterm.name = 'sequence_variant_affecting_rate_of_transcription' OR cvterm.name = 'sequence_variant_decreasing_rate_of_transcription' OR cvterm.name = 'sequence_variant_increasing_rate_of_transcription' OR cvterm.name = 'sequence_variation_affecting_coding_sequence' OR cvterm.name = 'sequence_variant_affecting_transcript_processing' OR cvterm.name = 'sequence variant_affecting_transcript_stability' OR cvterm.name = 'sequence_variant_affecting_transcript_secondary_structure' OR cvterm.name = 'sequence_variant_causing_amino_acid_coding_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_terminator_codon_change_in_transcript' OR cvterm.name = 'sequence_variation_affecting_reading_frame' OR cvterm.name = 'sequence_variant_causing_initiator_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_non_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonsense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_conservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonconservative_missense_codon_change_in_transcript' OR cvterm.name = 'frameshift_sequence_variation' OR cvterm.name = 'sequence_variant_causing_plus_1_frameshift_mutation' OR cvterm.name = 'sequence_variant_causing_minus_1_frameshift' OR cvterm.name = 'sequence_variant_causing_plus_2_frameshift' OR cvterm.name = 'sequence_variant_causing_minus_2_frameshift' OR cvterm.name = 'frame_restoring_sequence_variant' OR cvterm.name = 'sequence_variant_affecting_polyadenylation' OR cvterm.name = 'sequence_variant_affecting_editing' OR cvterm.name = 'sequence_variant_increasing_transcript_stability' OR cvterm.name = 'sequence_variant_decreasing_transcript_stability' OR cvterm.name = 'sequence_variant_causing_compensatory_transcript_secondary_structure_mutation' OR cvterm.name = 'sequence_variation_decreasing_level_of_transcript' OR cvterm.name = 'sequence_variation_increasing_level_of_transcript' OR cvterm.name = 'sequence_variant_causing_partially_characterised_change_in_transcript' OR cvterm.name = 'sequence_variation_affecting_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_no_change_in_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** No effect on the state of the RNA.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_no_change_in_transcript AS
>   SELECT
>     feature_id AS sequence_variant_causing_no_change_in_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_no_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variation_affecting_complex_change_in_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variation_affecting_complex_change_in_transcript AS
>   SELECT
>     feature_id AS sequence_variation_affecting_complex_change_in_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variation_affecting_complex_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variation_affecting_coding_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Any of the amino acid coding triplets of ***
> --- ***  a gene are affected by the DNA mutation ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variation_affecting_coding_sequence AS
>   SELECT
>     feature_id AS sequence_variation_affecting_coding_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_amino_acid_coding_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_terminator_codon_change_in_transcript' OR cvterm.name = 'sequence_variation_affecting_reading_frame' OR cvterm.name = 'sequence_variant_causing_initiator_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_non_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonsense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_conservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonconservative_missense_codon_change_in_transcript' OR cvterm.name = 'frameshift_sequence_variation' OR cvterm.name = 'sequence_variant_causing_plus_1_frameshift_mutation' OR cvterm.name = 'sequence_variant_causing_minus_1_frameshift' OR cvterm.name = 'sequence_variant_causing_plus_2_frameshift' OR cvterm.name = 'sequence_variant_causing_minus_2_frameshift' OR cvterm.name = 'frame_restoring_sequence_variant' OR cvterm.name = 'sequence_variation_affecting_coding_sequence';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_initiator_codon_change_in_trans ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The DNA mutation changes, usually destro ***
> --- *** ys, the first coding triplet of a gene.  ***
> --- *** Usually prevents translation although an ***
> --- *** other initiator codon may be used.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_initiator_codon_change_in_trans AS
>   SELECT
>     feature_id AS sequence_variant_causing_initiator_codon_change_in_trans_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_initiator_codon_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: seq_variant_causing_amino_acid_coding_codon_change_in_trans ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The DNA mutation affects the amino acid  ***
> --- *** coding sequence of a gene; this region i ***
> --- *** ncludes both the initiator and terminato ***
> --- *** r codons.                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_causing_amino_acid_coding_codon_change_in_trans AS
>   SELECT
>     feature_id AS seq_variant_causing_amino_acid_coding_codon_change_in_trans_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_initiator_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_non_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonsense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_conservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonconservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_amino_acid_coding_codon_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: seq_variant_causing_synonymous_codon_change_in_trans ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The changed codon has the same translati ***
> --- *** on product as the original codon.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_causing_synonymous_codon_change_in_trans AS
>   SELECT
>     feature_id AS seq_variant_causing_synonymous_codon_change_in_trans_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_synonymous_codon_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: seq_variant_causing_non_synonymous_codon_change_in_trans ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A DNA point mutation that causes a subst ***
> --- *** itution of an amino acid by an other.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_causing_non_synonymous_codon_change_in_trans AS
>   SELECT
>     feature_id AS seq_variant_causing_non_synonymous_codon_change_in_trans_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_conservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonconservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_non_synonymous_codon_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_missense_codon_change_in_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The nucleotide change in the codon leads ***
> --- ***  to a new codon coding for a new amino a ***
> --- *** cid.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_missense_codon_change_in_transcript AS
>   SELECT
>     feature_id AS sequence_variant_causing_missense_codon_change_in_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_conservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonconservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_missense_codon_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: seq_var_causing_conservative_missense_codon_change_in_trans ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The amino acid change following from the ***
> --- ***  codon change does not change the gross  ***
> --- *** properties (size, charge, hydrophobicity ***
> --- *** ) of the amino acid at that position.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_var_causing_conservative_missense_codon_change_in_trans AS
>   SELECT
>     feature_id AS seq_var_causing_conservative_missense_codon_change_in_trans_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_conservative_missense_codon_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: seq_var_causing_nonconserv_missense_codon_change_in_trans ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The amino acid change following from the ***
> --- ***  codon change changes the gross properti ***
> --- *** es (size, charge, hydrophobicity) of the ***
> --- ***  amino acid in that position.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_var_causing_nonconserv_missense_codon_change_in_trans AS
>   SELECT
>     feature_id AS seq_var_causing_nonconserv_missense_codon_change_in_trans_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_nonconservative_missense_codon_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_nonsense_codon_change_in_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The nucleotide change in the codon tripl ***
> --- *** et creates a terminator codon.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_nonsense_codon_change_in_transcript AS
>   SELECT
>     feature_id AS sequence_variant_causing_nonsense_codon_change_in_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_nonsense_codon_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_terminator_codon_change_in_trans ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The nucleotide change in the codon tripl ***
> --- *** et changes the stop codon, causing an el ***
> --- *** ongated transcript sequence.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_terminator_codon_change_in_trans AS
>   SELECT
>     feature_id AS sequence_variant_causing_terminator_codon_change_in_trans_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_terminator_codon_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variation_affecting_reading_frame ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An umbrella term for terms describing an ***
> --- ***  effect of a sequence variation on the f ***
> --- *** rame of translation.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variation_affecting_reading_frame AS
>   SELECT
>     feature_id AS sequence_variation_affecting_reading_frame_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'frameshift_sequence_variation' OR cvterm.name = 'sequence_variant_causing_plus_1_frameshift_mutation' OR cvterm.name = 'sequence_variant_causing_minus_1_frameshift' OR cvterm.name = 'sequence_variant_causing_plus_2_frameshift' OR cvterm.name = 'sequence_variant_causing_minus_2_frameshift' OR cvterm.name = 'frame_restoring_sequence_variant' OR cvterm.name = 'sequence_variation_affecting_reading_frame';
> 
> --- ************************************************
> --- *** relation: frameshift_sequence_variation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mutation causing a disruption of the t ***
> --- *** ranslational reading frame, because the  ***
> --- *** number of nucleotides inserted or delete ***
> --- *** d is not a multiple of three.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW frameshift_sequence_variation AS
>   SELECT
>     feature_id AS frameshift_sequence_variation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_plus_1_frameshift_mutation' OR cvterm.name = 'sequence_variant_causing_minus_1_frameshift' OR cvterm.name = 'sequence_variant_causing_plus_2_frameshift' OR cvterm.name = 'sequence_variant_causing_minus_2_frameshift' OR cvterm.name = 'frame_restoring_sequence_variant' OR cvterm.name = 'frameshift_sequence_variation';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_plus_1_frameshift_mutation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mutation causing a disruption of the t ***
> --- *** ranslational reading frame, due to the i ***
> --- *** nsertion of a nucleotide.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_plus_1_frameshift_mutation AS
>   SELECT
>     feature_id AS sequence_variant_causing_plus_1_frameshift_mutation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_plus_1_frameshift_mutation';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_minus_1_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mutation causing a disruption of the t ***
> --- *** ranslational reading frame, due to the d ***
> --- *** eletion of a nucleotide.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_minus_1_frameshift AS
>   SELECT
>     feature_id AS sequence_variant_causing_minus_1_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_minus_1_frameshift';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_plus_2_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mutation causing a disruption of the t ***
> --- *** ranslational reading frame, due to the i ***
> --- *** nsertion of two nucleotides.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_plus_2_frameshift AS
>   SELECT
>     feature_id AS sequence_variant_causing_plus_2_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_plus_2_frameshift';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_minus_2_frameshift ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mutation causing a disruption of the t ***
> --- *** ranslational reading frame, due to the d ***
> --- *** eletion of two nucleotides.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_minus_2_frameshift AS
>   SELECT
>     feature_id AS sequence_variant_causing_minus_2_frameshift_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_minus_2_frameshift';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_transcript_processing ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Sequence variant affects the way in whic ***
> --- *** h the primary transcriptional product is ***
> --- ***  processed to form the mature transcript ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_transcript_processing AS
>   SELECT
>     feature_id AS sequence_variant_affecting_transcript_processing_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_polyadenylation' OR cvterm.name = 'sequence_variant_affecting_editing' OR cvterm.name = 'sequence_variant_affecting_transcript_processing';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_splicing ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_variant_effect where the way  ***
> --- *** in which the primary transcriptional pro ***
> --- *** duct is processed to form the mature tra ***
> --- *** nscript, specifically by the removal (sp ***
> --- *** licing) of intron sequences is changed.  ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_splicing AS
>   SELECT
>     feature_id AS sequence_variant_affecting_splicing_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_splice_donor' OR cvterm.name = 'sequence_variant_affecting_splice_acceptor' OR cvterm.name = 'sequence_variant_causing_cryptic_splice_activation' OR cvterm.name = 'sequence_variant_causes_exon_loss' OR cvterm.name = 'sequence_variant_causes_intron_gain' OR cvterm.name = 'sequence_variant_causing_cryptic_splice_donor_activation' OR cvterm.name = 'sequence_variant_causing_cryptic_splice_acceptor_activation' OR cvterm.name = 'sequence_variant_affecting_splicing';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_splice_donor ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_variant_effect that changes t ***
> --- *** he splice donor sequence.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_splice_donor AS
>   SELECT
>     feature_id AS sequence_variant_affecting_splice_donor_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_splice_donor';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_splice_acceptor ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_variant_effect that changes t ***
> --- *** he splice acceptor sequence.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_splice_acceptor AS
>   SELECT
>     feature_id AS sequence_variant_affecting_splice_acceptor_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_splice_acceptor';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_cryptic_splice_activation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variant causing a new (functi ***
> --- *** onal) splice site.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_cryptic_splice_activation AS
>   SELECT
>     feature_id AS sequence_variant_causing_cryptic_splice_activation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_cryptic_splice_donor_activation' OR cvterm.name = 'sequence_variant_causing_cryptic_splice_acceptor_activation' OR cvterm.name = 'sequence_variant_causing_cryptic_splice_activation';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_editing ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Sequence variant affects the editing of  ***
> --- *** the transcript.                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_editing AS
>   SELECT
>     feature_id AS sequence_variant_affecting_editing_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_editing';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_transcription ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Mutation affects the process of transcri ***
> --- *** ption, its initiation, progression or te ***
> --- *** rmination.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_transcription AS
>   SELECT
>     feature_id AS sequence_variant_affecting_transcription_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_rate_of_transcription' OR cvterm.name = 'sequence_variant_decreasing_rate_of_transcription' OR cvterm.name = 'sequence_variant_increasing_rate_of_transcription' OR cvterm.name = 'sequence_variant_affecting_transcription';
> 
> --- ************************************************
> --- *** relation: sequence_variant_decreasing_rate_of_transcription ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variation that decreases the  ***
> --- *** rate a which transcription of the sequen ***
> --- *** ce occurs.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_decreasing_rate_of_transcription AS
>   SELECT
>     feature_id AS sequence_variant_decreasing_rate_of_transcription_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_decreasing_rate_of_transcription';
> 
> --- ************************************************
> --- *** relation: sequence_variation_affecting_transcript_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variation_affecting_transcript_sequence AS
>   SELECT
>     feature_id AS sequence_variation_affecting_transcript_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variation_affecting_coding_sequence' OR cvterm.name = 'sequence_variant_affecting_transcript_processing' OR cvterm.name = 'sequence variant_affecting_transcript_stability' OR cvterm.name = 'sequence_variant_affecting_transcript_secondary_structure' OR cvterm.name = 'sequence_variant_causing_amino_acid_coding_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_terminator_codon_change_in_transcript' OR cvterm.name = 'sequence_variation_affecting_reading_frame' OR cvterm.name = 'sequence_variant_causing_initiator_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_non_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonsense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_conservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonconservative_missense_codon_change_in_transcript' OR cvterm.name = 'frameshift_sequence_variation' OR cvterm.name = 'sequence_variant_causing_plus_1_frameshift_mutation' OR cvterm.name = 'sequence_variant_causing_minus_1_frameshift' OR cvterm.name = 'sequence_variant_causing_plus_2_frameshift' OR cvterm.name = 'sequence_variant_causing_minus_2_frameshift' OR cvterm.name = 'frame_restoring_sequence_variant' OR cvterm.name = 'sequence_variant_affecting_polyadenylation' OR cvterm.name = 'sequence_variant_affecting_editing' OR cvterm.name = 'sequence_variant_increasing_transcript_stability' OR cvterm.name = 'sequence_variant_decreasing_transcript_stability' OR cvterm.name = 'sequence_variant_causing_compensatory_transcript_secondary_structure_mutation' OR cvterm.name = 'sequence_variation_affecting_transcript_sequence';
> 
> --- ************************************************
> --- *** relation: sequence_variant_increasing_rate_of_transcription ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_increasing_rate_of_transcription AS
>   SELECT
>     feature_id AS sequence_variant_increasing_rate_of_transcription_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_increasing_rate_of_transcription';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_rate_of_transcription ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mutation that alters the rate a which  ***
> --- *** transcription of the sequence occurs.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_rate_of_transcription AS
>   SELECT
>     feature_id AS sequence_variant_affecting_rate_of_transcription_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_decreasing_rate_of_transcription' OR cvterm.name = 'sequence_variant_increasing_rate_of_transcription' OR cvterm.name = 'sequence_variant_affecting_rate_of_transcription';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_transcript_stability ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Sequence variant affects the stability o ***
> --- *** f the transcript.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_transcript_stability AS
>   SELECT
>     feature_id AS sequence_variant_affecting_transcript_stability_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_increasing_transcript_stability' OR cvterm.name = 'sequence_variant_decreasing_transcript_stability' OR cvterm.name = 'sequence variant_affecting_transcript_stability';
> 
> --- ************************************************
> --- *** relation: sequence_variant_increasing_transcript_stability ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Sequence variant increases the stability ***
> --- ***  (half-life) of the transcript.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_increasing_transcript_stability AS
>   SELECT
>     feature_id AS sequence_variant_increasing_transcript_stability_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_increasing_transcript_stability';
> 
> --- ************************************************
> --- *** relation: sequence_variant_decreasing_transcript_stability ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Sequence variant decreases the stability ***
> --- ***  (half-life) of the transcript.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_decreasing_transcript_stability AS
>   SELECT
>     feature_id AS sequence_variant_decreasing_transcript_stability_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_decreasing_transcript_stability';
> 
> --- ************************************************
> --- *** relation: sequence_variation_affecting_level_of_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variation that causes a chang ***
> --- *** e in the level of mature, spliced and pr ***
> --- *** ocessed RNA, resulting from a change in  ***
> --- *** the corresponding DNA sequence.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variation_affecting_level_of_transcript AS
>   SELECT
>     feature_id AS sequence_variation_affecting_level_of_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variation_decreasing_level_of_transcript' OR cvterm.name = 'sequence_variation_increasing_level_of_transcript' OR cvterm.name = 'sequence_variation_affecting_level_of_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variation_decreasing_level_of_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variation that causes a decre ***
> --- *** ase in the level of mature, spliced and  ***
> --- *** processed RNA, resulting from a change i ***
> --- *** n the corresponding DNA sequence.        ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variation_decreasing_level_of_transcript AS
>   SELECT
>     feature_id AS sequence_variation_decreasing_level_of_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variation_decreasing_level_of_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variation_increasing_level_of_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_variation that causes an incr ***
> --- *** ease in the level of mature, spliced and ***
> --- ***  processed RNA, resulting from a change  ***
> --- *** in the corresponding DNA sequence.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variation_increasing_level_of_transcript AS
>   SELECT
>     feature_id AS sequence_variation_increasing_level_of_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variation_increasing_level_of_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_translational_product ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Mutation causes a change in primary tran ***
> --- *** slation product of a transcript.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_translational_product AS
>   SELECT
>     feature_id AS sequence_variant_affecting_translational_product_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_no_change_of_translational_product' OR cvterm.name = 'sequence_variant_causing_uncharacterised_change_of_translational_product' OR cvterm.name = 'sequence_variant_causing_complex_change_of_translational_product' OR cvterm.name = 'sequence_variant_affecting_level_of_translational_product' OR cvterm.name = 'sequence_variant_affecting_polypeptide_amino_acid_sequence' OR cvterm.name = 'sequence_variant_affecting_3D_structure_of_polypeptide' OR cvterm.name = 'sequence_variant_affecting_polypeptide_function' OR cvterm.name = 'sequence_variant_causing_partially_characterised_change_of_translational_product' OR cvterm.name = 'sequence_variant_decreasing_level_of_translation_product' OR cvterm.name = 'sequence_variant_increasing_level_of_translation_product' OR cvterm.name = 'sequence_variant_causing_amino_acid_substitution' OR cvterm.name = 'sequence_variant_causing_amino_acid_insertion' OR cvterm.name = 'sequence_variant_causing_amino_acid_deletion' OR cvterm.name = 'sequence_variant_causing_polypeptide_truncation' OR cvterm.name = 'sequence_variant_causing_polypeptide_elongation' OR cvterm.name = 'sequence_variant_causing_polypeptide_fusion' OR cvterm.name = 'sequence_variant_causing_conservative_amino_acid_substitution' OR cvterm.name = 'sequence_variant_causing_nonconservative_amino_acid_substitution' OR cvterm.name = 'mutation_causing_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_inframe_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutaton_causing_inframe_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_C_terminal_elongation' OR cvterm.name = 'sequence_variant_causing_no_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_uncharacterised_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_complex_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_conformational_change' OR cvterm.name = 'sequence_variant_causing_partially_characterised_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_loss_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_polypeptide_localization_change' OR cvterm.name = 'sequence_variant_causing_polypeptide_post_translational_processing_change' OR cvterm.name = 'sequence_variant_causing_gain_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_inactive_ligand_binding_site' OR cvterm.name = 'sequence_variant_causing_polypeptide_post_translational_processing_change' OR cvterm.name = 'sequence_variant_causing_partial_loss_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_inactive_catalytic_site' OR cvterm.name = 'sequence_variant_affecting_translational_product';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_no_change_of_translational_product ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequence variant at RNA level does n ***
> --- *** ot lead to any change in polypeptide.    ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_no_change_of_translational_product AS
>   SELECT
>     feature_id AS sequence_variant_causing_no_change_of_translational_product_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_no_change_of_translational_product';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_uncharacterised_change_of_product ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variant causing an uncharacte ***
> --- *** rized change of translational product.   ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_uncharacterised_change_of_product AS
>   SELECT
>     feature_id AS sequence_variant_causing_uncharacterised_change_of_product_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_partially_characterised_change_of_translational_product' OR cvterm.name = 'sequence_variant_causing_uncharacterised_change_of_translational_product';
> 
> --- ************************************************
> --- *** relation: seq_variant_causing_partly_characterised_change_of_product ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variant causing a partially u ***
> --- *** ncharacterised change in translational p ***
> --- *** roduct.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_causing_partly_characterised_change_of_product AS
>   SELECT
>     feature_id AS seq_variant_causing_partly_characterised_change_of_product_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_partially_characterised_change_of_translational_product';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_complex_change_of_product ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Any sequence variant effect that is know ***
> --- *** n at nucleotide level but cannot be expl ***
> --- *** ained by using other key terms.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_complex_change_of_product AS
>   SELECT
>     feature_id AS sequence_variant_causing_complex_change_of_product_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_complex_change_of_translational_product';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_amino_acid_substitution ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The replacement of a single amino acid b ***
> --- *** y another.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_amino_acid_substitution AS
>   SELECT
>     feature_id AS sequence_variant_causing_amino_acid_substitution_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_conservative_amino_acid_substitution' OR cvterm.name = 'sequence_variant_causing_nonconservative_amino_acid_substitution' OR cvterm.name = 'sequence_variant_causing_amino_acid_substitution';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_conservative_amino_acid_sub ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_conservative_amino_acid_sub AS
>   SELECT
>     feature_id AS sequence_variant_causing_conservative_amino_acid_sub_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_conservative_amino_acid_substitution';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_nonconservative_amino_acid_sub ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_nonconservative_amino_acid_sub AS
>   SELECT
>     feature_id AS sequence_variant_causing_nonconservative_amino_acid_sub_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_nonconservative_amino_acid_substitution';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_amino_acid_insertion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The insertion of one or more amino acids ***
> --- ***  from the polypeptide, without affecting ***
> --- ***  the surrounding sequence.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_amino_acid_insertion AS
>   SELECT
>     feature_id AS sequence_variant_causing_amino_acid_insertion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_amino_acid_insertion';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_amino_acid_deletion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The deletion of one or more amino acids  ***
> --- *** from the polypeptide, without affecting  ***
> --- *** the surrounding sequence.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_amino_acid_deletion AS
>   SELECT
>     feature_id AS sequence_variant_causing_amino_acid_deletion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_amino_acid_deletion';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_polypeptide_truncation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The translational product is truncated a ***
> --- *** t its C-terminus, usually a result of a  ***
> --- *** nonsense codon change in transcript (SO: ***
> --- *** 1000062).                                ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_polypeptide_truncation AS
>   SELECT
>     feature_id AS sequence_variant_causing_polypeptide_truncation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_polypeptide_truncation';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_polypeptide_elongation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The extension of the translational produ ***
> --- *** ct at either (or both) the N-terminus an ***
> --- *** d/or the C-terminus.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_polypeptide_elongation AS
>   SELECT
>     feature_id AS sequence_variant_causing_polypeptide_elongation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mutation_causing_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_inframe_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutaton_causing_inframe_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_C_terminal_elongation' OR cvterm.name = 'sequence_variant_causing_polypeptide_elongation';
> 
> --- ************************************************
> --- *** relation: mutation_causing_polypeptide_n_terminal_elongation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW mutation_causing_polypeptide_n_terminal_elongation AS
>   SELECT
>     feature_id AS mutation_causing_polypeptide_n_terminal_elongation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mutation_causing_inframe_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_polypeptide_N_terminal_elongation';
> 
> --- ************************************************
> --- *** relation: mutation_causing_polypeptide_c_terminal_elongation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW mutation_causing_polypeptide_c_terminal_elongation AS
>   SELECT
>     feature_id AS mutation_causing_polypeptide_c_terminal_elongation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mutaton_causing_inframe_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_polypeptide_C_terminal_elongation';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_level_of_translational_product ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_level_of_translational_product AS
>   SELECT
>     feature_id AS sequence_variant_affecting_level_of_translational_product_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_decreasing_level_of_translation_product' OR cvterm.name = 'sequence_variant_increasing_level_of_translation_product' OR cvterm.name = 'sequence_variant_affecting_level_of_translational_product';
> 
> --- ************************************************
> --- *** relation: sequence_variant_decreasing_level_of_translation_product ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_decreasing_level_of_translation_product AS
>   SELECT
>     feature_id AS sequence_variant_decreasing_level_of_translation_product_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_decreasing_level_of_translation_product';
> 
> --- ************************************************
> --- *** relation: sequence_variant_increasing_level_of_translation_product ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_increasing_level_of_translation_product AS
>   SELECT
>     feature_id AS sequence_variant_increasing_level_of_translation_product_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_increasing_level_of_translation_product';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_polypeptide_amino_acid_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_polypeptide_amino_acid_sequence AS
>   SELECT
>     feature_id AS sequence_variant_affecting_polypeptide_amino_acid_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_amino_acid_substitution' OR cvterm.name = 'sequence_variant_causing_amino_acid_insertion' OR cvterm.name = 'sequence_variant_causing_amino_acid_deletion' OR cvterm.name = 'sequence_variant_causing_polypeptide_truncation' OR cvterm.name = 'sequence_variant_causing_polypeptide_elongation' OR cvterm.name = 'sequence_variant_causing_polypeptide_fusion' OR cvterm.name = 'sequence_variant_causing_conservative_amino_acid_substitution' OR cvterm.name = 'sequence_variant_causing_nonconservative_amino_acid_substitution' OR cvterm.name = 'mutation_causing_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_inframe_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutaton_causing_inframe_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_C_terminal_elongation' OR cvterm.name = 'sequence_variant_affecting_polypeptide_amino_acid_sequence';
> 
> --- ************************************************
> --- *** relation: mutation_causing_inframe_polypeptide_n_terminal_elongation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW mutation_causing_inframe_polypeptide_n_terminal_elongation AS
>   SELECT
>     feature_id AS mutation_causing_inframe_polypeptide_n_terminal_elongation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mutation_causing_inframe_polypeptide_N_terminal_elongation';
> 
> --- ************************************************
> --- *** relation: mutation_causing_out_of_frame_polypeptide_n_terminal_elong ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW mutation_causing_out_of_frame_polypeptide_n_terminal_elong AS
>   SELECT
>     feature_id AS mutation_causing_out_of_frame_polypeptide_n_terminal_elong_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mutation_causing_out_of_frame_polypeptide_N_terminal_elongation';
> 
> --- ************************************************
> --- *** relation: mutaton_causing_inframe_polypeptide_c_terminal_elongation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW mutaton_causing_inframe_polypeptide_c_terminal_elongation AS
>   SELECT
>     feature_id AS mutaton_causing_inframe_polypeptide_c_terminal_elongation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mutaton_causing_inframe_polypeptide_C_terminal_elongation';
> 
> --- ************************************************
> --- *** relation: mutation_causing_out_of_frame_polypeptide_c_terminal_elong ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW mutation_causing_out_of_frame_polypeptide_c_terminal_elong AS
>   SELECT
>     feature_id AS mutation_causing_out_of_frame_polypeptide_c_terminal_elong_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mutation_causing_out_of_frame_polypeptide_C_terminal_elongation';
> 
> --- ************************************************
> --- *** relation: frame_restoring_sequence_variant ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mutation that reverts the sequence of  ***
> --- *** a previous frameshift mutation back to t ***
> --- *** he initial frame.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW frame_restoring_sequence_variant AS
>   SELECT
>     feature_id AS frame_restoring_sequence_variant_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'frame_restoring_sequence_variant';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_3d_structure_of_polypeptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A mutation that changes the amino acid s ***
> --- *** equence of the peptide in such a way tha ***
> --- *** t it changes the 3D structure of the mol ***
> --- *** ecule.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_3d_structure_of_polypeptide AS
>   SELECT
>     feature_id AS sequence_variant_affecting_3d_structure_of_polypeptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_no_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_uncharacterised_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_complex_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_conformational_change' OR cvterm.name = 'sequence_variant_causing_partially_characterised_3D_structural_change' OR cvterm.name = 'sequence_variant_affecting_3D_structure_of_polypeptide';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_no_3d_structural_change ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_no_3d_structural_change AS
>   SELECT
>     feature_id AS sequence_variant_causing_no_3d_structural_change_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_no_3D_structural_change';
> 
> --- ************************************************
> --- *** relation: seq_variant_causing_uncharacterised_3d_structural_change ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_causing_uncharacterised_3d_structural_change AS
>   SELECT
>     feature_id AS seq_variant_causing_uncharacterised_3d_structural_change_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_partially_characterised_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_uncharacterised_3D_structural_change';
> 
> --- ************************************************
> --- *** relation: seq_var_causing_partly_characterised_3d_structural_change ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_var_causing_partly_characterised_3d_structural_change AS
>   SELECT
>     feature_id AS seq_var_causing_partly_characterised_3d_structural_change_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_partially_characterised_3D_structural_change';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_complex_3d_structural_change ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_complex_3d_structural_change AS
>   SELECT
>     feature_id AS sequence_variant_causing_complex_3d_structural_change_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_complex_3D_structural_change';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_conformational_change ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_conformational_change AS
>   SELECT
>     feature_id AS sequence_variant_causing_conformational_change_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_conformational_change';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_polypeptide_function ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_polypeptide_function AS
>   SELECT
>     feature_id AS sequence_variant_affecting_polypeptide_function_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_loss_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_polypeptide_localization_change' OR cvterm.name = 'sequence_variant_causing_polypeptide_post_translational_processing_change' OR cvterm.name = 'sequence_variant_causing_gain_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_inactive_ligand_binding_site' OR cvterm.name = 'sequence_variant_causing_polypeptide_post_translational_processing_change' OR cvterm.name = 'sequence_variant_causing_partial_loss_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_inactive_catalytic_site' OR cvterm.name = 'sequence_variant_affecting_polypeptide_function';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_loss_of_function_of_polypeptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_loss_of_function_of_polypeptide AS
>   SELECT
>     feature_id AS sequence_variant_causing_loss_of_function_of_polypeptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_inactive_ligand_binding_site' OR cvterm.name = 'sequence_variant_causing_polypeptide_post_translational_processing_change' OR cvterm.name = 'sequence_variant_causing_partial_loss_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_inactive_catalytic_site' OR cvterm.name = 'sequence_variant_causing_loss_of_function_of_polypeptide';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_inactive_ligand_binding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_inactive_ligand_binding_site AS
>   SELECT
>     feature_id AS sequence_variant_causing_inactive_ligand_binding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_inactive_catalytic_site' OR cvterm.name = 'sequence_variant_causing_inactive_ligand_binding_site';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_inactive_catalytic_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_inactive_catalytic_site AS
>   SELECT
>     feature_id AS sequence_variant_causing_inactive_catalytic_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_inactive_catalytic_site';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_polypeptide_localization_change ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_polypeptide_localization_change AS
>   SELECT
>     feature_id AS sequence_variant_causing_polypeptide_localization_change_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_polypeptide_localization_change';
> 
> --- ************************************************
> --- *** relation: seq_variant_causing_polypeptide_post_trans_processing_change ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_causing_polypeptide_post_trans_processing_change AS
>   SELECT
>     feature_id AS seq_variant_causing_polypeptide_post_trans_processing_change_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_polypeptide_post_translational_processing_change';
> 
> --- ************************************************
> --- *** relation: seq_variant_causing_part_loss_of_function_of_polypeptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_causing_part_loss_of_function_of_polypeptide AS
>   SELECT
>     feature_id AS seq_variant_causing_part_loss_of_function_of_polypeptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_partial_loss_of_function_of_polypeptide';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_gain_of_function_of_polypeptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_gain_of_function_of_polypeptide AS
>   SELECT
>     feature_id AS sequence_variant_causing_gain_of_function_of_polypeptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_gain_of_function_of_polypeptide';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_transcript_secondary_structure ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variant that affects the seco ***
> --- *** ndary structure (folding) of the RNA tra ***
> --- *** nscript molecule.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_transcript_secondary_structure AS
>   SELECT
>     feature_id AS sequence_variant_affecting_transcript_secondary_structure_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_compensatory_transcript_secondary_structure_mutation' OR cvterm.name = 'sequence_variant_affecting_transcript_secondary_structure';
> 
> --- ************************************************
> --- *** relation: seq_variant_caus_compensatory_trans_secondary_structure_mut ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_caus_compensatory_trans_secondary_structure_mut AS
>   SELECT
>     feature_id AS seq_variant_caus_compensatory_trans_secondary_structure_mut_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_compensatory_transcript_secondary_structure_mutation';
> 
> --- ************************************************
> --- *** relation: sequence_variant_effect ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The effect of a change in nucleotide seq ***
> --- *** uence.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_effect AS
>   SELECT
>     feature_id AS sequence_variant_effect_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_affecting_regulatory_region' OR cvterm.name = 'silent_mutation' OR cvterm.name = 'sequence_variant_affecting_copy_number' OR cvterm.name = 'sequence_variation_affecting_transcript' OR cvterm.name = 'sequence_variant_affecting_splicing' OR cvterm.name = 'sequence_variant_affecting_translational_product' OR cvterm.name = 'sequence_variant_affecting_gene_structure' OR cvterm.name = 'sequence_variant_causing_no_change_in_transcript' OR cvterm.name = 'sequence_variation_affecting_complex_change_in_transcript' OR cvterm.name = 'sequence_variant_affecting_transcription' OR cvterm.name = 'sequence_variation_affecting_transcript_sequence' OR cvterm.name = 'sequence_variation_affecting_level_of_transcript' OR cvterm.name = 'sequence_variant_causing_uncharacterised_change_in_transcript' OR cvterm.name = 'sequence_variant_affecting_rate_of_transcription' OR cvterm.name = 'sequence_variant_decreasing_rate_of_transcription' OR cvterm.name = 'sequence_variant_increasing_rate_of_transcription' OR cvterm.name = 'sequence_variation_affecting_coding_sequence' OR cvterm.name = 'sequence_variant_affecting_transcript_processing' OR cvterm.name = 'sequence variant_affecting_transcript_stability' OR cvterm.name = 'sequence_variant_affecting_transcript_secondary_structure' OR cvterm.name = 'sequence_variant_causing_amino_acid_coding_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_terminator_codon_change_in_transcript' OR cvterm.name = 'sequence_variation_affecting_reading_frame' OR cvterm.name = 'sequence_variant_causing_initiator_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_non_synonymous_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonsense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_conservative_missense_codon_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_nonconservative_missense_codon_change_in_transcript' OR cvterm.name = 'frameshift_sequence_variation' OR cvterm.name = 'sequence_variant_causing_plus_1_frameshift_mutation' OR cvterm.name = 'sequence_variant_causing_minus_1_frameshift' OR cvterm.name = 'sequence_variant_causing_plus_2_frameshift' OR cvterm.name = 'sequence_variant_causing_minus_2_frameshift' OR cvterm.name = 'frame_restoring_sequence_variant' OR cvterm.name = 'sequence_variant_affecting_polyadenylation' OR cvterm.name = 'sequence_variant_affecting_editing' OR cvterm.name = 'sequence_variant_increasing_transcript_stability' OR cvterm.name = 'sequence_variant_decreasing_transcript_stability' OR cvterm.name = 'sequence_variant_causing_compensatory_transcript_secondary_structure_mutation' OR cvterm.name = 'sequence_variation_decreasing_level_of_transcript' OR cvterm.name = 'sequence_variation_increasing_level_of_transcript' OR cvterm.name = 'sequence_variant_causing_partially_characterised_change_in_transcript' OR cvterm.name = 'sequence_variant_affecting_splice_donor' OR cvterm.name = 'sequence_variant_affecting_splice_acceptor' OR cvterm.name = 'sequence_variant_causing_cryptic_splice_activation' OR cvterm.name = 'sequence_variant_causes_exon_loss' OR cvterm.name = 'sequence_variant_causes_intron_gain' OR cvterm.name = 'sequence_variant_causing_cryptic_splice_donor_activation' OR cvterm.name = 'sequence_variant_causing_cryptic_splice_acceptor_activation' OR cvterm.name = 'sequence_variant_causing_no_change_of_translational_product' OR cvterm.name = 'sequence_variant_causing_uncharacterised_change_of_translational_product' OR cvterm.name = 'sequence_variant_causing_complex_change_of_translational_product' OR cvterm.name = 'sequence_variant_affecting_level_of_translational_product' OR cvterm.name = 'sequence_variant_affecting_polypeptide_amino_acid_sequence' OR cvterm.name = 'sequence_variant_affecting_3D_structure_of_polypeptide' OR cvterm.name = 'sequence_variant_affecting_polypeptide_function' OR cvterm.name = 'sequence_variant_causing_partially_characterised_change_of_translational_product' OR cvterm.name = 'sequence_variant_decreasing_level_of_translation_product' OR cvterm.name = 'sequence_variant_increasing_level_of_translation_product' OR cvterm.name = 'sequence_variant_causing_amino_acid_substitution' OR cvterm.name = 'sequence_variant_causing_amino_acid_insertion' OR cvterm.name = 'sequence_variant_causing_amino_acid_deletion' OR cvterm.name = 'sequence_variant_causing_polypeptide_truncation' OR cvterm.name = 'sequence_variant_causing_polypeptide_elongation' OR cvterm.name = 'sequence_variant_causing_polypeptide_fusion' OR cvterm.name = 'sequence_variant_causing_conservative_amino_acid_substitution' OR cvterm.name = 'sequence_variant_causing_nonconservative_amino_acid_substitution' OR cvterm.name = 'mutation_causing_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_inframe_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_N_terminal_elongation' OR cvterm.name = 'mutaton_causing_inframe_polypeptide_C_terminal_elongation' OR cvterm.name = 'mutation_causing_out_of_frame_polypeptide_C_terminal_elongation' OR cvterm.name = 'sequence_variant_causing_no_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_uncharacterised_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_complex_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_conformational_change' OR cvterm.name = 'sequence_variant_causing_partially_characterised_3D_structural_change' OR cvterm.name = 'sequence_variant_causing_loss_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_polypeptide_localization_change' OR cvterm.name = 'sequence_variant_causing_polypeptide_post_translational_processing_change' OR cvterm.name = 'sequence_variant_causing_gain_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_inactive_ligand_binding_site' OR cvterm.name = 'sequence_variant_causing_polypeptide_post_translational_processing_change' OR cvterm.name = 'sequence_variant_causing_partial_loss_of_function_of_polypeptide' OR cvterm.name = 'sequence_variant_causing_inactive_catalytic_site' OR cvterm.name = 'sequence_variant_causing_gene_fusion' OR cvterm.name = 'sequence_variant_effect';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_polypeptide_fusion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_polypeptide_fusion AS
>   SELECT
>     feature_id AS sequence_variant_causing_polypeptide_fusion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_polypeptide_fusion';
> 
> --- ************************************************
> --- *** relation: autosynaptic_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW autosynaptic_chromosome AS
>   SELECT
>     feature_id AS autosynaptic_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dexstrosynaptic_chromosome' OR cvterm.name = 'laevosynaptic_chromosome' OR cvterm.name = 'autosynaptic_chromosome';
> 
> --- ************************************************
> --- *** relation: homo_compound_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW homo_compound_chromosome AS
>   SELECT
>     feature_id AS homo_compound_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'homo_compound_chromosome';
> 
> --- ************************************************
> --- *** relation: hetero_compound_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW hetero_compound_chromosome AS
>   SELECT
>     feature_id AS hetero_compound_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'hetero_compound_chromosome';
> 
> --- ************************************************
> --- *** relation: chromosome_fission ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome_fission AS
>   SELECT
>     feature_id AS chromosome_fission_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'chromosome_fission';
> 
> --- ************************************************
> --- *** relation: dexstrosynaptic_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW dexstrosynaptic_chromosome AS
>   SELECT
>     feature_id AS dexstrosynaptic_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dexstrosynaptic_chromosome';
> 
> --- ************************************************
> --- *** relation: laevosynaptic_chromosome ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW laevosynaptic_chromosome AS
>   SELECT
>     feature_id AS laevosynaptic_chromosome_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'laevosynaptic_chromosome';
> 
> --- ************************************************
> --- *** relation: free_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW free_duplication AS
>   SELECT
>     feature_id AS free_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'free_ring_duplication' OR cvterm.name = 'free_duplication';
> 
> --- ************************************************
> --- *** relation: free_ring_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW free_ring_duplication AS
>   SELECT
>     feature_id AS free_ring_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'free_ring_duplication';
> 
> --- ************************************************
> --- *** relation: complex_chromosomal_mutation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW complex_chromosomal_mutation AS
>   SELECT
>     feature_id AS complex_chromosomal_mutation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'complex_chromosomal_mutation';
> 
> --- ************************************************
> --- *** relation: deficient_translocation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A translocation in which one of the four ***
> --- ***  broken ends loses a segment before re-j ***
> --- *** oining.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW deficient_translocation AS
>   SELECT
>     feature_id AS deficient_translocation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deficient_translocation';
> 
> --- ************************************************
> --- *** relation: inversion_cum_translocation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The first two breaks are in the same chr ***
> --- *** omosome, and the region between them is  ***
> --- *** rejoined in inverted order to the other  ***
> --- *** side of the first break, such that both  ***
> --- *** sides of break one are present on the sa ***
> --- *** me chromosome. The remaining free ends a ***
> --- *** re joined as a translocation with those  ***
> --- *** resulting from the third break.          ***
> --- ************************************************
> ---
> 
> CREATE VIEW inversion_cum_translocation AS
>   SELECT
>     feature_id AS inversion_cum_translocation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inversion_cum_translocation';
> 
> --- ************************************************
> --- *** relation: bipartite_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The (large) region between the first two ***
> --- ***  breaks listed is lost, and the two flan ***
> --- *** king segments (one of them centric) are  ***
> --- *** joined as a translocation to the free en ***
> --- *** ds resulting from the third break.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW bipartite_duplication AS
>   SELECT
>     feature_id AS bipartite_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'bipartite_duplication';
> 
> --- ************************************************
> --- *** relation: cyclic_translocation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Three breaks in three different chromoso ***
> --- *** mes. The centric segment resulting from  ***
> --- *** the first break listed is joined to the  ***
> --- *** acentric segment resulting from the seco ***
> --- *** nd, rather than the third.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW cyclic_translocation AS
>   SELECT
>     feature_id AS cyclic_translocation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cyclic_translocation';
> 
> --- ************************************************
> --- *** relation: bipartite_inversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Three breaks in the same chromosome; bot ***
> --- *** h central segments are inverted in place ***
> --- ***  (i.e., they are not transposed).        ***
> --- ************************************************
> ---
> 
> CREATE VIEW bipartite_inversion AS
>   SELECT
>     feature_id AS bipartite_inversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'bipartite_inversion';
> 
> --- ************************************************
> --- *** relation: uninvert_insert_dup ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A copy of the segment between the first  ***
> --- *** two breaks listed is inserted at the thi ***
> --- *** rd break; the insertion is in cytologica ***
> --- *** lly the same orientation as its flanking ***
> --- ***  segments.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW uninvert_insert_dup AS
>   SELECT
>     feature_id AS uninvert_insert_dup_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'uninverted_insertional_duplication';
> 
> --- ************************************************
> --- *** relation: inverted_insertional_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A copy of the segment between the first  ***
> --- *** two breaks listed is inserted at the thi ***
> --- *** rd break; the insertion is in cytologica ***
> --- *** lly inverted orientation with respect to ***
> --- ***  its flanking segments.                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW inverted_insertional_duplication AS
>   SELECT
>     feature_id AS inverted_insertional_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inverted_insertional_duplication';
> 
> --- ************************************************
> --- *** relation: insertional_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A chromosome duplication involving the i ***
> --- *** nsertion of a duplicated region.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW insertional_duplication AS
>   SELECT
>     feature_id AS insertional_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'uninverted_insertional_duplication' OR cvterm.name = 'inverted_insertional_duplication' OR cvterm.name = 'unoriented_insertional_duplication' OR cvterm.name = 'insertional_duplication';
> 
> --- ************************************************
> --- *** relation: interchromosomal_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW interchromosomal_transposition AS
>   SELECT
>     feature_id AS interchromosomal_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deficient_interchromosomal_transposition' OR cvterm.name = 'inverted_interchromosomal_transposition' OR cvterm.name = 'uninverted_interchromosomal_transposition' OR cvterm.name = 'unorientated_interchromosomal_transposition' OR cvterm.name = 'interchromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: invert_inter_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW invert_inter_transposition AS
>   SELECT
>     feature_id AS invert_inter_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inverted_interchromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: uninvert_inter_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW uninvert_inter_transposition AS
>   SELECT
>     feature_id AS uninvert_inter_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'uninverted_interchromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: invert_intra_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The segment between the first two breaks ***
> --- ***  listed is removed and inserted at the t ***
> --- *** hird break; the insertion is in cytologi ***
> --- *** cally inverted orientation with respect  ***
> --- *** to its flanking segments.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW invert_intra_transposition AS
>   SELECT
>     feature_id AS invert_intra_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'inverted_intrachromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: uninvert_intra_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The segment between the first two breaks ***
> --- ***  listed is removed and inserted at the t ***
> --- *** hird break; the insertion is in cytologi ***
> --- *** cally the same orientation as its flanki ***
> --- *** ng segments.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW uninvert_intra_transposition AS
>   SELECT
>     feature_id AS uninvert_intra_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'uninverted_intrachromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: unorient_insert_dup ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A copy of the segment between the first  ***
> --- *** two breaks listed is inserted at the thi ***
> --- *** rd break; the orientation of the inserti ***
> --- *** on with respect to its flanking segments ***
> --- ***  is not recorded.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW unorient_insert_dup AS
>   SELECT
>     feature_id AS unorient_insert_dup_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'unoriented_insertional_duplication';
> 
> --- ************************************************
> --- *** relation: unorient_inter_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW unorient_inter_transposition AS
>   SELECT
>     feature_id AS unorient_inter_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'unorientated_interchromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: unorient_intra_transposition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The segment between the first two breaks ***
> --- ***  listed is removed and inserted at the t ***
> --- *** hird break; the orientation of the inser ***
> --- *** tion with respect to its flanking segmen ***
> --- *** ts is not recorded.                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW unorient_intra_transposition AS
>   SELECT
>     feature_id AS unorient_intra_transposition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'unorientated_intrachromosomal_transposition';
> 
> --- ************************************************
> --- *** relation: uncharacterised_chromosomal_mutation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW uncharacterised_chromosomal_mutation AS
>   SELECT
>     feature_id AS uncharacterised_chromosomal_mutation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'partially_characterised_chromosomal_mutation' OR cvterm.name = 'uncharacterised_chromosomal_mutation';
> 
> --- ************************************************
> --- *** relation: deficient_inversion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Three breaks in the same chromosome; one ***
> --- ***  central region lost, the other inverted ***
> --- *** .                                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW deficient_inversion AS
>   SELECT
>     feature_id AS deficient_inversion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'deficient_inversion';
> 
> --- ************************************************
> --- *** relation: tandem_duplication ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW tandem_duplication AS
>   SELECT
>     feature_id AS tandem_duplication_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'direct_tandem_duplication' OR cvterm.name = 'inverted_tandem_duplication' OR cvterm.name = 'tandem_duplication';
> 
> --- ************************************************
> --- *** relation: partially_characterised_chromosomal_mutation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW partially_characterised_chromosomal_mutation AS
>   SELECT
>     feature_id AS partially_characterised_chromosomal_mutation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'partially_characterised_chromosomal_mutation';
> 
> --- ************************************************
> --- *** relation: seq_variant_causing_uncharacterised_change_in_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The nature of the mutation event is eith ***
> --- *** er uncharacterised or only partially cha ***
> --- *** racterised.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_causing_uncharacterised_change_in_transcript AS
>   SELECT
>     feature_id AS seq_variant_causing_uncharacterised_change_in_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_partially_characterised_change_in_transcript' OR cvterm.name = 'sequence_variant_causing_uncharacterised_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: seq_variant_causing_partly_characterised_change_in_trans ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The nature of the mutation event is only ***
> --- ***  partially characterised.                ***
> --- ************************************************
> ---
> 
> CREATE VIEW seq_variant_causing_partly_characterised_change_in_trans AS
>   SELECT
>     feature_id AS seq_variant_causing_partly_characterised_change_in_trans_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_partially_characterised_change_in_transcript';
> 
> --- ************************************************
> --- *** relation: sequence_variant_affecting_gene_structure ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_variant_effect that changes t ***
> --- *** he gene structure.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_affecting_gene_structure AS
>   SELECT
>     feature_id AS sequence_variant_affecting_gene_structure_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_gene_fusion' OR cvterm.name = 'sequence_variant_affecting_gene_structure';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_gene_fusion ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence_variant_effect that changes t ***
> --- *** he gene structure by causing a fusion to ***
> --- ***  another gene.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_gene_fusion AS
>   SELECT
>     feature_id AS sequence_variant_causing_gene_fusion_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_gene_fusion';
> 
> --- ************************************************
> --- *** relation: chromosome_number_variation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A kind of chromosome variation where the ***
> --- ***  chromosome complement is not an exact m ***
> --- *** ultiple of the haploid number.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome_number_variation AS
>   SELECT
>     feature_id AS chromosome_number_variation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'aneuploid' OR cvterm.name = 'polyploid' OR cvterm.name = 'hyperploid' OR cvterm.name = 'hypoploid' OR cvterm.name = 'autopolyploid' OR cvterm.name = 'allopolyploid' OR cvterm.name = 'chromosome_number_variation';
> 
> --- ************************************************
> --- *** relation: chromosome_structure_variation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW chromosome_structure_variation AS
>   SELECT
>     feature_id AS chromosome_structure_variation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'free_chromosome_arm' OR cvterm.name = 'transposition' OR cvterm.name = 'aneuploid_chromosome' OR cvterm.name = 'intrachromosomal_mutation' OR cvterm.name = 'interchromosomal_mutation' OR cvterm.name = 'compound_chromosome' OR cvterm.name = 'autosynaptic_chromosome' OR cvterm.name = 'complex_chromosomal_mutation' OR cvterm.name = 'uncharacterised_chromosomal_mutation' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'interchromosomal_transposition' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'deficient_interchromosomal_transposition' OR cvterm.name = 'inverted_interchromosomal_transposition' OR cvterm.name = 'uninverted_interchromosomal_transposition' OR cvterm.name = 'unorientated_interchromosomal_transposition' OR cvterm.name = 'inversion_derived_aneuploid_chromosome' OR cvterm.name = 'chromosomal_deletion' OR cvterm.name = 'chromosomal_duplication' OR cvterm.name = 'inversion_derived_bipartite_deficiency' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_aneuploid' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'interchromosomal_duplication' OR cvterm.name = 'intrachromosomal_duplication' OR cvterm.name = 'free_duplication' OR cvterm.name = 'insertional_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_bipartite_duplication' OR cvterm.name = 'inversion_derived_duplication_plus_aneuploid' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'tandem_duplication' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'direct_tandem_duplication' OR cvterm.name = 'inverted_tandem_duplication' OR cvterm.name = 'free_ring_duplication' OR cvterm.name = 'uninverted_insertional_duplication' OR cvterm.name = 'inverted_insertional_duplication' OR cvterm.name = 'unoriented_insertional_duplication' OR cvterm.name = 'chromosomal_deletion' OR cvterm.name = 'chromosomal_inversion' OR cvterm.name = 'intrachromosomal_duplication' OR cvterm.name = 'ring_chromosome' OR cvterm.name = 'chromosome_fission' OR cvterm.name = 'inversion_derived_bipartite_deficiency' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_deficiency_plus_aneuploid' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'inverted_ring_chromosome' OR cvterm.name = 'pericentric_inversion' OR cvterm.name = 'paracentric_inversion' OR cvterm.name = 'inversion_cum_translocation' OR cvterm.name = 'bipartite_inversion' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'deficient_inversion' OR cvterm.name = 'inversion_derived_deficiency_plus_duplication' OR cvterm.name = 'inversion_derived_bipartite_duplication' OR cvterm.name = 'inversion_derived_duplication_plus_aneuploid' OR cvterm.name = 'intrachromosomal_transposition' OR cvterm.name = 'tandem_duplication' OR cvterm.name = 'deficient_intrachromosomal_transposition' OR cvterm.name = 'inverted_intrachromosomal_transposition' OR cvterm.name = 'uninverted_intrachromosomal_transposition' OR cvterm.name = 'unorientated_intrachromosomal_transposition' OR cvterm.name = 'direct_tandem_duplication' OR cvterm.name = 'inverted_tandem_duplication' OR cvterm.name = 'inverted_ring_chromosome' OR cvterm.name = 'free_ring_duplication' OR cvterm.name = 'chromosomal_translocation' OR cvterm.name = 'bipartite_duplication' OR cvterm.name = 'interchromosomal_transposition' OR cvterm.name = 'translocation_element' OR cvterm.name = 'Robertsonian_fusion' OR cvterm.name = 'reciprocal_chromosomal_translocation' OR cvterm.name = 'deficient_translocation' OR cvterm.name = 'inversion_cum_translocation' OR cvterm.name = 'cyclic_translocation' OR cvterm.name = 'deficient_interchromosomal_transposition' OR cvterm.name = 'inverted_interchromosomal_transposition' OR cvterm.name = 'uninverted_interchromosomal_transposition' OR cvterm.name = 'unorientated_interchromosomal_transposition' OR cvterm.name = 'compound_chromosome_arm' OR cvterm.name = 'homo_compound_chromosome' OR cvterm.name = 'hetero_compound_chromosome' OR cvterm.name = 'dexstrosynaptic_chromosome' OR cvterm.name = 'laevosynaptic_chromosome' OR cvterm.name = 'partially_characterised_chromosomal_mutation' OR cvterm.name = 'chromosome_structure_variation';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causes_exon_loss ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variant affecting splicing an ***
> --- *** d causes an exon loss.                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causes_exon_loss AS
>   SELECT
>     feature_id AS sequence_variant_causes_exon_loss_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causes_exon_loss';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causes_intron_gain ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A sequence variant effect, causing an in ***
> --- *** tron to be gained by the processed trans ***
> --- *** cript; usually a result of a donor accep ***
> --- *** tor mutation (SO:1000072).               ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causes_intron_gain AS
>   SELECT
>     feature_id AS sequence_variant_causes_intron_gain_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causes_intron_gain';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_cryptic_splice_donor_activation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_cryptic_splice_donor_activation AS
>   SELECT
>     feature_id AS sequence_variant_causing_cryptic_splice_donor_activation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_cryptic_splice_donor_activation';
> 
> --- ************************************************
> --- *** relation: sequence_variant_causing_cryptic_splice_acceptor_activation ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW sequence_variant_causing_cryptic_splice_acceptor_activation AS
>   SELECT
>     feature_id AS sequence_variant_causing_cryptic_splice_acceptor_activation_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'sequence_variant_causing_cryptic_splice_acceptor_activation';
> 
> --- ************************************************
> --- *** relation: alternatively_spliced_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A transcript that is alternatively splic ***
> --- *** ed.                                      ***
> --- ************************************************
> ---
> 
> CREATE VIEW alternatively_spliced_transcript AS
>   SELECT
>     feature_id AS alternatively_spliced_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'alternatively_spliced_transcript';
> 
> --- ************************************************
> --- *** relation: encodes_1_polypeptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is alternately spliced, but  ***
> --- *** encodes only one polypeptide.            ***
> --- ************************************************
> ---
> 
> CREATE VIEW encodes_1_polypeptide AS
>   SELECT
>     feature_id AS encodes_1_polypeptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'encodes_1_polypeptide';
> 
> --- ************************************************
> --- *** relation: encodes_greater_than_1_polypeptide ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is alternately spliced, and  ***
> --- *** encodes more than one polypeptide.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW encodes_greater_than_1_polypeptide AS
>   SELECT
>     feature_id AS encodes_greater_than_1_polypeptide_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'encodes_disjoint_polypeptides' OR cvterm.name = 'encodes_overlapping_peptides' OR cvterm.name = 'encodes_different_polypeptides_different_stop' OR cvterm.name = 'encodes_overlapping_peptides_different_start' OR cvterm.name = 'encodes_overlapping_polypeptides_different_start_and_stop' OR cvterm.name = 'encodes_greater_than_1_polypeptide';
> 
> --- ************************************************
> --- *** relation: encodes_different_polypeptides_different_stop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is alternately spliced, and  ***
> --- *** encodes more than one polypeptide, that  ***
> --- *** have overlapping peptide sequences, but  ***
> --- *** use different stop codons.               ***
> --- ************************************************
> ---
> 
> CREATE VIEW encodes_different_polypeptides_different_stop AS
>   SELECT
>     feature_id AS encodes_different_polypeptides_different_stop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'encodes_different_polypeptides_different_stop';
> 
> --- ************************************************
> --- *** relation: encodes_overlapping_peptides_different_start ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is alternately spliced, and  ***
> --- *** encodes more than one polypeptide, that  ***
> --- *** have overlapping peptide sequences, but  ***
> --- *** use different start codons.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW encodes_overlapping_peptides_different_start AS
>   SELECT
>     feature_id AS encodes_overlapping_peptides_different_start_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'encodes_overlapping_peptides_different_start';
> 
> --- ************************************************
> --- *** relation: encodes_disjoint_polypeptides ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is alternately spliced, and  ***
> --- *** encodes more than one polypeptide, that  ***
> --- *** do not have overlapping peptide sequence ***
> --- *** s.                                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW encodes_disjoint_polypeptides AS
>   SELECT
>     feature_id AS encodes_disjoint_polypeptides_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'encodes_disjoint_polypeptides';
> 
> --- ************************************************
> --- *** relation: encodes_overlapping_polypeptides_different_start_and_stop ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is alternately spliced, and  ***
> --- *** encodes more than one polypeptide, that  ***
> --- *** have overlapping peptide sequences, but  ***
> --- *** use different start and stop codons.     ***
> --- ************************************************
> ---
> 
> CREATE VIEW encodes_overlapping_polypeptides_different_start_and_stop AS
>   SELECT
>     feature_id AS encodes_overlapping_polypeptides_different_start_and_stop_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'encodes_overlapping_polypeptides_different_start_and_stop';
> 
> --- ************************************************
> --- *** relation: encodes_overlapping_peptides ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene that is alternately spliced, and  ***
> --- *** encodes more than one polypeptide, that  ***
> --- *** have overlapping peptide sequences.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW encodes_overlapping_peptides AS
>   SELECT
>     feature_id AS encodes_overlapping_peptides_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'encodes_different_polypeptides_different_stop' OR cvterm.name = 'encodes_overlapping_peptides_different_start' OR cvterm.name = 'encodes_overlapping_polypeptides_different_start_and_stop' OR cvterm.name = 'encodes_overlapping_peptides';
> 
> --- ************************************************
> --- *** relation: cryptogene ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A maxicircle gene so extensively edited  ***
> --- *** that it cannot be matched to its edited  ***
> --- *** mRNA sequence.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW cryptogene AS
>   SELECT
>     feature_id AS cryptogene_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'cryptogene';
> 
> --- ************************************************
> --- *** relation: dicistronic_primary_transcript ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A primary transcript that has the qualit ***
> --- *** y dicistronic.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW dicistronic_primary_transcript AS
>   SELECT
>     feature_id AS dicistronic_primary_transcript_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'dicistronic_primary_transcript';
> 
> --- ************************************************
> --- *** relation: member_of_regulon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- ************************************************
> ---
> 
> CREATE VIEW member_of_regulon AS
>   SELECT
>     feature_id AS member_of_regulon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'member_of_regulon';
> 
> --- ************************************************
> --- *** relation: cds_independently_known ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A CDS with the evidence status of being  ***
> --- *** independently known.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW cds_independently_known AS
>   SELECT
>     feature_id AS cds_independently_known_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CDS_independently_known';
> 
> --- ************************************************
> --- *** relation: orphan_cds ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A CDS whose predicted amino acid sequenc ***
> --- *** e is unsupported by any experimental evi ***
> --- *** dence or by any match with any other kno ***
> --- *** wn sequence.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW orphan_cds AS
>   SELECT
>     feature_id AS orphan_cds_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'orphan_CDS';
> 
> --- ************************************************
> --- *** relation: cds_supported_by_domain_match_data ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A CDS that is supported by domain simila ***
> --- *** rity.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW cds_supported_by_domain_match_data AS
>   SELECT
>     feature_id AS cds_supported_by_domain_match_data_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CDS_supported_by_domain_match_data';
> 
> --- ************************************************
> --- *** relation: cds_supported_by_sequence_similarity_data ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A CDS that is supported by sequence simi ***
> --- *** larity data.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW cds_supported_by_sequence_similarity_data AS
>   SELECT
>     feature_id AS cds_supported_by_sequence_similarity_data_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CDS_supported_by_domain_match_data' OR cvterm.name = 'CDS_supported_by_EST_or_cDNA_data' OR cvterm.name = 'CDS_supported_by_sequence_similarity_data';
> 
> --- ************************************************
> --- *** relation: cds_predicted ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A CDS that is predicted.                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW cds_predicted AS
>   SELECT
>     feature_id AS cds_predicted_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'orphan_CDS' OR cvterm.name = 'CDS_supported_by_sequence_similarity_data' OR cvterm.name = 'CDS_supported_by_domain_match_data' OR cvterm.name = 'CDS_supported_by_EST_or_cDNA_data' OR cvterm.name = 'CDS_predicted';
> 
> --- ************************************************
> --- *** relation: cds_supported_by_est_or_cdna_data ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A CDS that is supported by similarity to ***
> --- ***  EST or cDNA data.                       ***
> --- ************************************************
> ---
> 
> CREATE VIEW cds_supported_by_est_or_cdna_data AS
>   SELECT
>     feature_id AS cds_supported_by_est_or_cdna_data_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CDS_supported_by_EST_or_cDNA_data';
> 
> --- ************************************************
> --- *** relation: internal_shine_dalgarno_sequence ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A Shine-Dalgarno sequence that stimulate ***
> --- *** s recoding through interactions with the ***
> --- ***  anti-Shine-Dalgarno in the RNA of small ***
> --- ***  ribosomal subunits of translating ribos ***
> --- *** omes. The signal is only operative in Ba ***
> --- *** cteria.                                  ***
> --- ************************************************
> ---
> 
> CREATE VIEW internal_shine_dalgarno_sequence AS
>   SELECT
>     feature_id AS internal_shine_dalgarno_sequence_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_Shine_Dalgarno_sequence';
> 
> --- ************************************************
> --- *** relation: recoded_mrna ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequence of a mature mRNA transcript ***
> --- *** , modified before translation or during  ***
> --- *** translation, usually by special cis-acti ***
> --- *** ng signals.                              ***
> --- ************************************************
> ---
> 
> CREATE VIEW recoded_mrna AS
>   SELECT
>     feature_id AS recoded_mrna_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_recoded_by_translational_bypass' OR cvterm.name = 'mRNA_recoded_by_codon_redefinition' OR cvterm.name = 'recoded_mRNA';
> 
> --- ************************************************
> --- *** relation: minus_1_translationally_frameshifted ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a translational  ***
> --- *** frameshift of -1.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW minus_1_translationally_frameshifted AS
>   SELECT
>     feature_id AS minus_1_translationally_frameshifted_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'minus_1_translationally_frameshifted';
> 
> --- ************************************************
> --- *** relation: plus_1_translationally_frameshifted ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An attribute describing a translational  ***
> --- *** frameshift of +1.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW plus_1_translationally_frameshifted AS
>   SELECT
>     feature_id AS plus_1_translationally_frameshifted_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'plus_1_translationally_frameshifted';
> 
> --- ************************************************
> --- *** relation: mrna_recoded_by_translational_bypass ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recoded_mRNA where translation was sus ***
> --- *** pended at a particular codon and resumed ***
> --- ***  at a particular non-overlapping downstr ***
> --- *** eam codon.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna_recoded_by_translational_bypass AS
>   SELECT
>     feature_id AS mrna_recoded_by_translational_bypass_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_recoded_by_translational_bypass';
> 
> --- ************************************************
> --- *** relation: mrna_recoded_by_codon_redefinition ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recoded_mRNA that was modified by an a ***
> --- *** lteration of codon meaning.              ***
> --- ************************************************
> ---
> 
> CREATE VIEW mrna_recoded_by_codon_redefinition AS
>   SELECT
>     feature_id AS mrna_recoded_by_codon_redefinition_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'mRNA_recoded_by_codon_redefinition';
> 
> --- ************************************************
> --- *** relation: recoding_stimulatory_region ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A site in an mRNA sequence that stimulat ***
> --- *** es the recoding of a region in the same  ***
> --- *** mRNA.                                    ***
> --- ************************************************
> ---
> 
> CREATE VIEW recoding_stimulatory_region AS
>   SELECT
>     feature_id AS recoding_stimulatory_region_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'internal_Shine_Dalgarno_sequence' OR cvterm.name = 'SECIS_element' OR cvterm.name = 'three_prime_recoding_site' OR cvterm.name = 'five_prime_recoding_site' OR cvterm.name = 'stop_codon_signal' OR cvterm.name = 'three_prime_stem_loop_structure' OR cvterm.name = 'flanking_three_prime_quadruplet_recoding_signal' OR cvterm.name = 'three_prime_repeat_recoding_signal' OR cvterm.name = 'distant_three_prime_recoding_signal' OR cvterm.name = 'UAG_stop_codon_signal' OR cvterm.name = 'UAA_stop_codon_signal' OR cvterm.name = 'UGA_stop_codon_signal' OR cvterm.name = 'recoding_stimulatory_region';
> 
> --- ************************************************
> --- *** relation: four_bp_start_codon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non-canonical start codon with 4 base  ***
> --- *** pairs.                                   ***
> --- ************************************************
> ---
> 
> CREATE VIEW four_bp_start_codon AS
>   SELECT
>     feature_id AS four_bp_start_codon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'four_bp_start_codon';
> 
> --- ************************************************
> --- *** relation: archaeal_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An intron characteristic of Archaeal tRN ***
> --- *** A and rRNA genes, where intron transcrip ***
> --- *** t generates a bulge-helix-bulge motif th ***
> --- *** at is recognised by a splicing endoribon ***
> --- *** uclease.                                 ***
> --- ************************************************
> ---
> 
> CREATE VIEW archaeal_intron AS
>   SELECT
>     feature_id AS archaeal_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'archaeal_intron';
> 
> --- ************************************************
> --- *** relation: trna_intron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** An intron found in tRNA that is spliced  ***
> --- *** via endonucleolytic cleavage and ligatio ***
> --- *** n rather than transesterification.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW trna_intron AS
>   SELECT
>     feature_id AS trna_intron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'tRNA_intron';
> 
> --- ************************************************
> --- *** relation: ctg_start_codon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A non-canonical start codon of sequence  ***
> --- *** CTG.                                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW ctg_start_codon AS
>   SELECT
>     feature_id AS ctg_start_codon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'CTG_start_codon';
> 
> --- ************************************************
> --- *** relation: secis_element ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The incorporation of selenocysteine into ***
> --- ***  a protein sequence is directed by an in ***
> --- *** -frame UGA codon (usually a stop codon)  ***
> --- *** within the coding region of the mRNA. Se ***
> --- *** lenoprotein mRNAs contain a conserved se ***
> --- *** condary structure in the 3' UTR that is  ***
> --- *** required for the distinction of UGA stop ***
> --- ***  from UGA selenocysteine. The selenocyst ***
> --- *** eine insertion sequence (SECIS) is aroun ***
> --- *** d 60 nt in length and adopts a hairpin s ***
> --- *** tructure which is sufficiently well-defi ***
> --- *** ned and conserved to act as a computatio ***
> --- *** nal screen for selenoprotein genes.      ***
> --- ************************************************
> ---
> 
> CREATE VIEW secis_element AS
>   SELECT
>     feature_id AS secis_element_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'SECIS_element';
> 
> --- ************************************************
> --- *** relation: retron ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Sequence coding for a short, single-stra ***
> --- *** nded, DNA sequence via a retrotransposed ***
> --- ***  RNA intermediate; characteristic of som ***
> --- *** e microbial genomes.                     ***
> --- ************************************************
> ---
> 
> CREATE VIEW retron AS
>   SELECT
>     feature_id AS retron_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'retron';
> 
> --- ************************************************
> --- *** relation: three_prime_recoding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The recoding stimulatory signal located  ***
> --- *** downstream of the recoding site.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_recoding_site AS
>   SELECT
>     feature_id AS three_prime_recoding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_stem_loop_structure' OR cvterm.name = 'flanking_three_prime_quadruplet_recoding_signal' OR cvterm.name = 'three_prime_repeat_recoding_signal' OR cvterm.name = 'distant_three_prime_recoding_signal' OR cvterm.name = 'three_prime_recoding_site';
> 
> --- ************************************************
> --- *** relation: three_prime_stem_loop_structure ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recoding stimulatory region, the stem- ***
> --- *** loop secondary structural element is dow ***
> --- *** nstream of the redefined region.         ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_stem_loop_structure AS
>   SELECT
>     feature_id AS three_prime_stem_loop_structure_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_stem_loop_structure';
> 
> --- ************************************************
> --- *** relation: five_prime_recoding_site ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The recoding stimulatory signal located  ***
> --- *** upstream of the recoding site.           ***
> --- ************************************************
> ---
> 
> CREATE VIEW five_prime_recoding_site AS
>   SELECT
>     feature_id AS five_prime_recoding_site_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'five_prime_recoding_site';
> 
> --- ************************************************
> --- *** relation: flanking_three_prime_quadruplet_recoding_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** Four base pair sequence immediately down ***
> --- *** stream of the redefined region. The rede ***
> --- *** fined region is a frameshift site. The q ***
> --- *** uadruplet is 2 overlapping codons.       ***
> --- ************************************************
> ---
> 
> CREATE VIEW flanking_three_prime_quadruplet_recoding_signal AS
>   SELECT
>     feature_id AS flanking_three_prime_quadruplet_recoding_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'flanking_three_prime_quadruplet_recoding_signal';
> 
> --- ************************************************
> --- *** relation: uag_stop_codon_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A stop codon signal for a UAG stop codon ***
> --- ***  redefinition.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW uag_stop_codon_signal AS
>   SELECT
>     feature_id AS uag_stop_codon_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'UAG_stop_codon_signal';
> 
> --- ************************************************
> --- *** relation: uaa_stop_codon_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A stop codon signal for a UAA stop codon ***
> --- ***  redefinition.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW uaa_stop_codon_signal AS
>   SELECT
>     feature_id AS uaa_stop_codon_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'UAA_stop_codon_signal';
> 
> --- ************************************************
> --- *** relation: regulon ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A group of genes, whether linked as a cl ***
> --- *** uster or not, that respond to a common r ***
> --- *** egulatory signal.                        ***
> --- ************************************************
> ---
> 
> CREATE VIEW regulon AS
>   SELECT
>     feature_id AS regulon_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'regulon';
> 
> --- ************************************************
> --- *** relation: uga_stop_codon_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A stop codon signal for a UGA stop codon ***
> --- ***  redefinition.                           ***
> --- ************************************************
> ---
> 
> CREATE VIEW uga_stop_codon_signal AS
>   SELECT
>     feature_id AS uga_stop_codon_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'UGA_stop_codon_signal';
> 
> --- ************************************************
> --- *** relation: three_prime_repeat_recoding_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recoding stimulatory signal, downstrea ***
> --- *** m sequence important for recoding that c ***
> --- *** ontains repetitive elements.             ***
> --- ************************************************
> ---
> 
> CREATE VIEW three_prime_repeat_recoding_signal AS
>   SELECT
>     feature_id AS three_prime_repeat_recoding_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'three_prime_repeat_recoding_signal';
> 
> --- ************************************************
> --- *** relation: distant_three_prime_recoding_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recoding signal that is found many hun ***
> --- *** dreds of nucleotides 3' of a redefined s ***
> --- *** top codon.                               ***
> --- ************************************************
> ---
> 
> CREATE VIEW distant_three_prime_recoding_signal AS
>   SELECT
>     feature_id AS distant_three_prime_recoding_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'distant_three_prime_recoding_signal';
> 
> --- ************************************************
> --- *** relation: stop_codon_signal ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A recoding stimulatory signal that is a  ***
> --- *** stop codon and has effect on efficiency  ***
> --- *** of recoding.                             ***
> --- ************************************************
> ---
> 
> CREATE VIEW stop_codon_signal AS
>   SELECT
>     feature_id AS stop_codon_signal_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'UAG_stop_codon_signal' OR cvterm.name = 'UAA_stop_codon_signal' OR cvterm.name = 'UGA_stop_codon_signal' OR cvterm.name = 'stop_codon_signal';
> 
> --- ************************************************
> --- *** relation: databank_entry ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** The sequence referred to by an entry in  ***
> --- *** a databank such as Genbank or SwissProt. ***
> --- ************************************************
> ---
> 
> CREATE VIEW databank_entry AS
>   SELECT
>     feature_id AS databank_entry_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'databank_entry';
> 
> --- ************************************************
> --- *** relation: gene_segment ***
> --- *** relation type: VIEW                      ***
> --- ***                                          ***
> --- *** A gene component region which acts as a  ***
> --- *** recombinational unit of a gene whose fun ***
> --- *** ctional form is generated through somati ***
> --- *** c recombination.                         ***
> --- ************************************************
> ---
> 
> CREATE VIEW gene_segment AS
>   SELECT
>     feature_id AS gene_segment_id,
>     feature.*
>   FROM
>     feature INNER JOIN cvterm ON (feature.type_id = cvterm.cvterm_id)
>   WHERE cvterm.name = 'gene_segment';
> 
> CREATE TABLE sequence_cv_lookup_table (sequence_cv_lookup_table_id serial not null, primary key(sequence_cv_lookup_table_id), original_cvterm_name varchar(1024), relation_name varchar(128));
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('helitron','helitron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cleaved_initiator_methionine','cleaved_initiator_methionine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('epoxyqueuosine','epoxyqueuosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u4atac_snrna','u4atac_snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('kinetoplast','kinetoplast');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('shadow_enhancer','shadow_enhancer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered','engineered');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('seven_aminomethyl_seven_deazaguanosine','seven_aminomethyl_seven_deazaguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('low_complexity','low_complexity');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('est_match','est_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_nonamer','v_nonamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_21s','rrna_21s');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_dj_j_c_cluster','d_dj_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_carboxymethyluridine','five_carboxymethyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bound_by_factor','bound_by_factor');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_methylthio_n6_methyladenosine','two_methylthio_n6_methyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dinucleotide_repeat_microsatellite_feature','dinucleotide_repeat_microsatellite_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trans_spliced_mrna','trans_spliced_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('g_to_c_transversion','g_to_c_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('heptamer_of_recombination_feature_of_vertebrate_immune_system_gene','heptamer_of_recombination_feature_of_vertebrate_im_sys_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('genotype','genotype');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cloned_region','cloned_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tmrna_coding_piece','tmrna_coding_piece');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna_6s','rna_6s');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('minicircle','minicircle');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('grna_encoding','grna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('endonuclease_spliced_intron','endonuclease_spliced_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('insertional_duplication','insertional_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('databank_entry','databank_entry');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('glycine','glycine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_cluster','v_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_nickel_ion_contact_site','polypeptide_nickel_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('circular_single_stranded_rna_chromosome','circular_single_stranded_rna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('wc_base_pair','wc_base_pair');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pcr_product','pcr_product');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_three_amino_three_carboxypropyl_uridine','three_three_amino_three_carboxypropyl_uridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('site_specific_recombination_target_region','site_specific_recombination_target_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_polycistronic_transcript','gene_with_polycistronic_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rescue','rescue');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nuclease_hypersensitive_site','nuclease_hypersensitive_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirna_loop','mirna_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('double_stranded_cdna','double_stranded_cdna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('supported_by_domain_match','supported_by_domain_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('one_methylpseudouridine','one_methylpseudouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n_terminal_region','n_terminal_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('experimental_result_region','experimental_result_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methionine_trna_primary_transcript','methionine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('utr','utr');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_terminal_residue','non_terminal_residue');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('member_of_regulon','member_of_regulon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('threonine_trna_primary_transcript','thr_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cds_supported_by_sequence_similarity_data','cds_supported_by_sequence_similarity_data');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_structural_region','polypeptide_structural_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trna_gene','trna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_bulge_loop_six','beta_bulge_loop_six');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_tungsten_ion_contact_site','polypeptide_tungsten_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('encodes_overlapping_polypeptides_different_start_and_stop','encodes_overlapping_polypeptides_different_start_and_stop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_nest_right_left_motif','polypeptide_nest_right_left_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_location','sequence_location');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_dj_c_cluster','d_dj_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trans_spliced_transcript','trans_spliced_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('y_rna','y_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('leucoplast_gene','leucoplast_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('splicing_regulatory_region','splicing_regulatory_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('branch_site','branch_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_bulge_loop_five','beta_bulge_loop_five');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome_breakpoint','chromosome_breakpoint');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_uncertainty','sequence_uncertainty');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_methyl_n6_threonylcarbamoyladenosine','n6_methyl_n6_threonylcarbamoyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_mrna_with_frameshift','gene_with_mrna_with_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('compositionally_biased_region_of_peptide','compositionally_biased_region_of_peptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vj_j_c_cluster','vj_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_splice_acceptor','sequence_variant_affecting_splice_acceptor');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pirna','pirna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('reverse_hoogsteen_base_pair','reverse_hoogsteen_base_pair');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tryptophanyl_trna','tryptophanyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polya_primed_cdna_clone','polya_primed_cdna_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('leucoplast_chromosome','leucoplast_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('status','status');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ltr_retrotransposon','ltr_retrotransposon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rnase_p_rna','rnase_p_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('conjugative_transposon','conjugative_transposon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('linkage_group','linkage_group');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_trans_spliced_transcript','gene_with_trans_spliced_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('peptide_coil','peptide_coil');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pyrrolysine_trna_primary_transcript','pyrrolysine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_vj_c_cluster','v_vj_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('phage_sequence','phage_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recoded','recoded');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transposon_fragment','transposon_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vj_c_cluster','vj_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('editing_domain','editing_domain');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methylaminomethyluridine','five_methylaminomethyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nucleotide_insertion','nucleotide_insertion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mutaton_causing_inframe_polypeptide_c_terminal_elongation','mutaton_causing_inframe_polypeptide_c_terminal_elongation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_ltr_retrotransposon_polymeric_tract','non_ltr_retrotransposon_polymeric_tract');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transversion','transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tryptophan','tryptophan');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recursive_splice_site','recursive_splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('insulator_binding_site','insulator_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('proline_trna_primary_transcript','proline_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('repeat_fragment','repeat_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('blocked_reading_frame','blocked_reading_frame');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_cleavage_snorna_primary_transcript','rrna_cleavage_snorna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_isopentenyladenosine','n6_isopentenyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_arginine','modified_l_arginine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_conserved_motif','polypeptide_conserved_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('t3_rna_polymerase_promoter','t3_rna_polymerase_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_derived_bipartite_duplication','inversion_derived_bipartite_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trans_splice_acceptor_site','trans_splice_acceptor_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_prime_o_ribosyladenosine_phosphate','two_prime_o_riboA_phosphate');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rre_rna','rre_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pac_end','pac_end');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('extramembrane_polypeptide_region','extramembrane_polypeptide_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intein','intein');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('twintron','twintron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_carboxymethylaminomethyl_two_prime_o_methyluridine','five_carboxymethylaminomethyl_two_prime_o_methyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('scrna_primary_transcript','scrna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_cobalt_ion_contact_site','polypeptide_cobalt_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tmrna_encoding','tmrna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('flanked','flanked');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ctg_start_codon','ctg_start_codon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion','inversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('eukaryotic_terminator','eukaryotic_terminator');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tyrosine_trna_primary_transcript','tyrosine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('coding_region_of_exon','coding_region_of_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('spliceosomal_intron_region','spliceosomal_intron_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('frt_flanked','frt_flanked');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cloned_cdna_insert','cloned_cdna_insert');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_vdj_c_cluster','v_vdj_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('translationally_regulated','translationally_regulated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variation_affecting_reading_frame','sequence_variation_affecting_reading_frame');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_minus_1_frameshift','sequence_variant_causing_minus_1_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('histidyl_trna','histidyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sonicate_fragment','sonicate_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_recoded_mrna','gene_with_recoded_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_prime_o_methyluridine','two_prime_o_methyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cosmid','cosmid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silenced_by_rna_interference','silenced_by_rna_interference');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('snorna','snorna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mature_transcript','mature_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudouridylation_guide_snorna','pseudouridylation_guide_snorna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_gene','c_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('floxed_gene','floxed_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('spot_42_rna','spot_42_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cdna_clone','cdna_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_ltr','three_prime_ltr');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('group_ii_intron','group_ii_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pna_oligo','pna_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('insertion_sequence','insertion_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('junction','junction');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('paralogous','paralogous');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tna','tna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_isopentenylaminomethyl_two_thiouridine','five_isopentenylaminomethyl_two_thiouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('minus_1_frameshift','minus_1_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_gene_structure','sequence_variant_affecting_gene_structure');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_canonical_three_prime_splice_site','non_canonical_three_prime_splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudogenic_rrna','pseudogenic_rrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('serine_threonine_turn','serine_threonine_turn');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('j_gene','j_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('strna_primary_transcript','strna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('internal_eliminated_sequence','internal_eliminated_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('allelically_excluded_gene','allelically_excluded_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('qtl','qtl');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_est','three_prime_est');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('reverse','reverse');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirna_encoding','mirna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n2_n2_2_prime_o_trimethylguanosine','n2_n2_2_prime_o_trimethylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('encodes_alternate_transcription_start_sites','encodes_alternate_transcription_start_sites');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_array','gene_array');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tetranucleotide_repeat_microsatellite_feature','tetranuc_repeat_microsat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_aminomethyl_two_thiouridine','five_aminomethyl_two_thiouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('monocistronic_primary_transcript','monocistronic_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_cryptic_splice_acceptor_activation','sequence_variant_causing_cryptic_splice_acceptor_activation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mobile_genetic_element','mobile_genetic_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_ligand_contact','polypeptide_ligand_contact');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('biomaterial_region','biomaterial_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transposable_element_flanking_region','transposable_element_flanking_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('symmetric_rna_internal_loop','symmetric_rna_internal_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna_with_plus_1_frameshift','mrna_with_plus_1_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcriptionally_regulated','transcriptionally_regulated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_intron','five_prime_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vertebrate_immune_system_gene_recombination_feature','vertebrate_immune_system_gene_recombination_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_carboxyhydroxymethyl_uridine_methyl_ester','five_carboxyhydroxymethyl_uridine_methyl_ester');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('proplastid_gene','proplastid_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('serine_trna_primary_transcript','serine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('attp_site','attp_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('antisense','antisense');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('terminal_inverted_repeat_element','terminal_inverted_repeat_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('coiled_coil','coiled_coil');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_vdj_cluster','v_vdj_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('edited_transcript_by_a_to_i_substitution','edited_transcript_by_a_to_i_substitution');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('protein_coding_primary_transcript','protein_coding_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mite','mite');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('insertion','insertion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('secis_element','secis_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('maxicircle','maxicircle');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tss','tss');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cysteine','cysteine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ribothymidine','ribothymidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_adjacent_residues','non_adjacent_residues');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('internal_ribosome_entry_site','internal_ribosome_entry_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('outron','outron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_repeat','polypeptide_repeat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('clone_insert_start','clone_insert_start');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('attr_site','attr_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dmv3_motif','dmv3_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('capped_mrna','capped_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_non_synonymous_codon_change_in_transcript','seq_variant_causing_non_synonymous_codon_change_in_trans');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_rearrangement_feature','sequence_rearrangement_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('apicoplast_chromosome','apicoplast_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_type_six_a_two','beta_turn_type_six_a_two');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('invalidated','invalidated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polya_junction','polya_junction');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_partial_loss_of_function_of_polypeptide','seq_variant_causing_part_loss_of_function_of_polypeptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('valine','valine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('translationally_regulated_gene','translationally_regulated_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('promoter_targeting_sequence','promoter_targeting_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polinton','polinton');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_tag','engineered_tag');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methylcytidine','five_methylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudouridine','pseudouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('positively_autoregulated','positively_autoregulated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('amplification_origin','amplification_origin');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('unoriented_insertional_duplication','unorient_insert_dup');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('extrachromosomal_mobile_genetic_element','extrachromosomal_mobile_genetic_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcriptionally_constitutive','transcriptionally_constitutive');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_polypeptide_fusion','sequence_variant_causing_polypeptide_fusion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('utr_region','utr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tyrosine','tyrosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirna','mirna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inr1_motif','inr1_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_acetyladenosine','n6_acetyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cis_splice_site','cis_splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_right_handed_type_two','beta_turn_right_handed_type_two');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('floxed','floxed');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_terminal_region','c_terminal_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_leucine','modified_l_leucine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variation_affecting_complex_change_in_transcript','sequence_variation_affecting_complex_change_in_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_ltr_component','five_prime_ltr_component');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vdj_c_cluster','vdj_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcriptional_cis_regulatory_region','transcriptional_cis_regulatory_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome_part','chromosome_part');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('insertion_site','insertion_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('phenylalanyl_trna','phenylalanyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('overlapping_est_set','overlapping_est_set');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gc_rich_promoter_region','gc_rich_promoter_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asx_turn_right_handed_type_two','asx_turn_right_handed_type_two');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('anticodon_loop','anticodon_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('partially_characterised_change_in_dna_sequence','partially_characterised_change_in_dna_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dmv5_motif','dmv5_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sl1_acceptor_site','sl1_acceptor_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cds_region','cds_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_dj_j_c_cluster','v_dj_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_insert','engineered_insert');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recombinationally_inverted_gene','recombinationally_inverted_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cassette_array_member','cassette_array_member');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('microarray_oligo','microarray_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u12_snrna','u12_snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('supported_by_est_or_cdna','supported_by_est_or_cdna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('minus_10_signal','minus_10_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('clone_insert_end','clone_insert_end');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inr_motif','inr_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_inactive_ligand_binding_site','sequence_variant_causing_inactive_ligand_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_stem_loop_structure','three_prime_stem_loop_structure');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_decreasing_level_of_translation_product','sequence_variant_decreasing_level_of_translation_product');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rflp_fragment','rflp_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('phage_rna_polymerase_promoter','phage_rna_polymerase_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pyrimidine_transition','pyrimidine_transition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intrinsically_unstructured_polypeptide_region','intrinsically_unstructured_polypeptide_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n2_2_prime_o_dimethylguanosine','n2_2_prime_o_dimethylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('archaeal_intron','archaeal_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('lna','lna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('exon_junction','exon_junction');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('t7_rna_polymerase_promoter','t7_rna_polymerase_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inverted_interchromosomal_transposition','invert_inter_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('episome','episome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uninverted_insertional_duplication','uninvert_insert_dup');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_difference','sequence_difference');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_d_dj_c_cluster','v_d_dj_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_conflict','sequence_conflict');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_gene_fusion','sequence_variant_causing_gene_fusion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tiling_path_clone','tiling_path_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('group_iii_intron','group_iii_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_glycine','modified_glycine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_alteration','sequence_alteration');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polyploid','polyploid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_silenced_by_dna_modification','gene_silenced_by_dna_modification');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_vj_j_cluster','v_vj_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('isoleucine_trna_primary_transcript','isoleucine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_small_subunit_primary_transcript','rrna_small_subunit_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ltr_component','ltr_component');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plus_2_framshift','plus_2_framshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('glutamic_acid_trna_primary_transcript','glutamic_acid_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_rearranged_at_dna_level','gene_rearranged_at_dna_level');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('edited_transcript','edited_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('invalidated_by_partial_processing','invalidated_by_partial_processing');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequencing_primer','sequencing_primer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cleaved_for_gpi_anchor_region','cleaved_for_gpi_anchor_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('frameshift_sequence_variation','frameshift_sequence_variation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_cysteine','modified_l_cysteine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_utr','five_prime_utr');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('frt_site','frt_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('terminal_inverted_repeat','terminal_inverted_repeat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transition','transition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('deletion_junction','deletion_junction');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_right_handed_type_one','beta_turn_right_handed_type_one');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_prime_o_ribosylguanosine_phosphate','two_prime_o_ribosylguanosine_phosphate');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_carbamoylmethyl_two_prime_o_methyluridine','five_cm_2_prime_o_methU');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('internal_transcribed_spacer_region','internal_transcribed_spacer_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dicistronic','dicistronic');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('supported_by_sequence_similarity','supported_by_sequence_similarity');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('reverse_primer','reverse_primer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u3_three_prime_ltr_region','u3_three_prime_ltr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('glutamine_trna_primary_transcript','glutamine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rnapol_ii_promoter','rnapol_ii_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('overlapping','overlapping');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('alpha_beta_motif','alpha_beta_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_transposable_element','engineered_transposable_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('forward_primer','forward_primer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('attctn_site','attctn_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_d_recombination_signal_sequence','five_prime_d_recombination_signal_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_conservative_amino_acid_substitution','sequence_variant_causing_conservative_amino_acid_sub');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u6_snrna','u6_snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recombinationally_rearranged_gene','recombinationally_rearranged_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_threonylcarbamoyladenosine','n6_threonylcarbamoyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_carbamoylmethyluridine','five_carbamoylmethyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cds_fragment','cds_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('genome','genome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('promoter','promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('protein_coding_gene','protein_coding_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u5_snrna','u5_snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('wybutosine','wybutosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methylwyosine','methylwyosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('large_subunit_rrna','large_subunit_rrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_amino_acid_substitution','sequence_variant_causing_amino_acid_substitution');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n4_2_prime_o_dimethylcytidine','n4_2_prime_o_dimethylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_to_t_transition','c_to_t_transition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variation_affecting_transcript_sequence','sequence_variation_affecting_transcript_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bidirectional_promoter','bidirectional_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_partially_characterised_change_of_translational_product','seq_variant_causing_partly_characterised_change_of_product');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('validated_cdna_clone','validated_cdna_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('k_turn_rna_motif','k_turn_rna_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcribed_fragment','transcribed_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_ust','five_prime_ust');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_utr_intron','three_prime_utr_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('retrogene','retrogene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pyrimidine_to_purine_transversion','pyrimidine_to_purine_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sine_element','sine_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_rst','five_prime_rst');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_coding exon_coding_region','three_prime_coding_exon_coding_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('utr_intron','utr_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_no_3d_structural_change','sequence_variant_causing_no_3d_structural_change');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('interchromosomal_transposition','interchromosomal_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna_sequence_secondary_structure','rna_sequence_secondary_structure');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_foreign_transposable_element','engineered_foreign_transposable_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ds_rna_viral_sequence','ds_rna_viral_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('fosmid','fosmid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('complex_substitution','complex_substitution');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('validated','validated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u2_snrna','u2_snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('caat_signal','caat_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_cluster','c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('consensus_region','consensus_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vertebrate_immune_system_gene_recombination_spacer','vertebrate_immune_system_gene_recombination_spacer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_trap_construct','gene_trap_construct');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna_aptamer','rna_aptamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcriptionally_induced','transcriptionally_induced');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rescue_region','rescue_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_site_part','inversion_site_part');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('origin_of_replication','origin_of_replication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mutation_causing_out_of_frame_polypeptide_c_terminal_elongation','mutation_causing_out_of_frame_polypeptide_c_terminal_elong');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna_internal_loop','rna_internal_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ultracontig','ultracontig');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('peptidyl','peptidyl');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_region','polypeptide_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transgenic_insertion','transgenic_insertion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirna_antiguide','mirna_antiguide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rearranged_at_dna_level','rearranged_at_dna_level');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_spacer','v_spacer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('strand_attribute','strand_attribute');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variation_increasing_level_of_transcript','sequence_variation_increasing_level_of_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('alternatively_spliced','alternatively_spliced');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_formyl_two_prime_o_methylcytidine','five_formyl_two_prime_o_methylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plasmid_location','plasmid_location');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('four_bp_start_codon','four_bp_start_codon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recombinationally_rearranged','recombinationally_rearranged');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chimeric_cdna_clone','chimeric_cdna_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_dicistronic_transcript','gene_with_dicistronic_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_ltr_component','three_prime_ltr_component');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('retron','retron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('autopolyploid','autopolyploid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('phenylalanine','phenylalanine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transit_peptide','transit_peptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_28s','rrna_28s');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('one_two_prime_o_dimethylinosine','one_two_prime_o_dimethylinosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('threonine','threonine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('a_minor_rna_motif','a_minor_rna_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('j_cluster','j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_dj_cluster','d_dj_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_cryptic_splice_activation','sequence_variant_causing_cryptic_splice_activation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome_arm','chromosome_arm');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('kinetoplast_gene','kinetoplast_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('line_element','line_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('solo_ltr','solo_ltr');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('external_transcribed_spacer_region','external_transcribed_spacer_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_transcribed_region','non_transcribed_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirna_stem','mirna_stem');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dj_j_c_cluster','dj_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('hyperploid','hyperploid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cryptic','cryptic');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('alpha_helix','alpha_helix');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('fusion','fusion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vdj_j_cluster','vdj_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('isowyosine','isowyosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('paracentric_inversion','paracentric_inversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mutation_causing_inframe_polypeptide_n_terminal_elongation','mutation_causing_inframe_polypeptide_n_terminal_elongation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('homing_endonuclease_binding_site','homing_endonuclease_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tna_oligo','tna_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mini_gene','mini_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('restriction_fragment','restriction_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('base_pair','base_pair');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inside_intron_antiparallel','inside_intron_antiparallel');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_transcription','sequence_variant_affecting_transcription');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dna_binding_site','dna_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_cytidine','modified_cytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('hydrophobic_region_of_peptide','hydrophobic_region_of_peptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polycistronic_primary_transcript','polycistronic_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_proline','modified_l_proline');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('overlapping_feature_set','overlapping_feature_set');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asx_turn_left_handed_type_two','asx_turn_left_handed_type_two');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('interchromosomal_duplication','interchromosomal_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('substitution','substitution');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('isoleucine','isoleucine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_recoding_site','three_prime_recoding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('terminator_of_type_2_rnapol_iii_promoter','terminator_of_type_2_rnapol_iii_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('glycine_trna_primary_transcript','glycine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mutation_causing_polypeptide_c_terminal_elongation','mutation_causing_polypeptide_c_terminal_elongation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_heptamer','v_heptamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dispersed_repeat','dispersed_repeat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('primer','primer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variation_affecting_transcript','sequence_variation_affecting_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('wild_type','wild_type');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_domain','polypeptide_domain');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_synonymous_codon_change_in_transcript','seq_variant_causing_synonymous_codon_change_in_trans');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('fusion_gene','fusion_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('arginyl_trna','arginyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_member_region','gene_member_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uninverted_intrachromosomal_transposition','uninvert_intra_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_translational_product','sequence_variant_affecting_translational_product');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methylated_base_feature','methylated_base_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('scrna_gene','scrna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_18s','rrna_18s');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_polypeptide_elongation','sequence_variant_causing_polypeptide_elongation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rnapol_iii_promoter_type_1','rnapol_iii_promoter_type_1');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('point_mutation','point_mutation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_3d_structure_of_polypeptide','sequence_variant_affecting_3d_structure_of_polypeptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudoknot','pseudoknot');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('g_quartet','g_quartet');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_selenocysteine','modified_l_selenocysteine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('schellmann_loop','schellmann_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pna','pna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_coding_exon','three_prime_coding_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('endogenous_retroviral_gene','endogenous_retroviral_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vertebrate_immunoglobulin_t_cell_receptor_segment','vertebrate_immunoglobulin_t_cell_receptor_segment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna_recoded_by_translational_bypass','mrna_recoded_by_translational_bypass');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_foreign_region','engineered_foreign_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('snorna_encoding','snorna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_est','five_prime_est');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('srp_rna_encoding','srp_rna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('foldback_element','foldback_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_j_c_cluster','d_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dj_c_cluster','dj_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_encoding','rrna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna_recoded_by_codon_redefinition','mrna_recoded_by_codon_redefinition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methyluridine','five_methyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('immature_peptide_region','immature_peptide_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('homologous','homologous');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('metabolic_island','metabolic_island');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polya_sequence','polya_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sirna','sirna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_attribute','sequence_attribute');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trna_intron','trna_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plus_1_translationally_frameshifted','plus_1_translationally_frameshifted');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nucleotide_motif','nucleotide_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dna_motif','dna_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_noncoding_exon','five_prime_noncoding_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_strand','beta_strand');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('one_methyladenosine','one_methyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ds_oligo','ds_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asx_motif','asx_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('oxys_rna','oxys_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_hydroxyuridine','five_hydroxyuridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_formylcytidine','five_formylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plus_1_translational_frameshift','plus_1_translational_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('coding_exon','coding_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('spliced_leader_rna','spliced_leader_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n2_7_2prirme_o_trimethylguanosine','n2_7_2prirme_o_trimethylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_fragment','gene_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mitochondrial_chromosome','mitochondrial_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methyldihydrouridine','five_methyldihydrouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('propeptide_cleavage_site','propeptide_cleavage_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('frameshift','frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('amino_acid','amino_acid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('translocation_breakpoint','translocation_breakpoint');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_compensatory_transcript_secondary_structure_mutation','seq_variant_caus_compensatory_trans_secondary_structure_mut');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('helix_turn_helix','helix_turn_helix');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_5_8s','rrna_5_8s');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('simple_sequence_length_variation','simple_sequence_length_variation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methionine','methionine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transposable_element_gene','transposable_element_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('genomic_island','genomic_island');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_segment','gene_segment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('snrna_gene','snrna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_region','engineered_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cryptogene','cryptogene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_coding_exon_noncoding_region','three_prime_coding_exon_noncoding_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_silenced_by_rna_interference','gene_silenced_by_rna_interference');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('deficient_interchromosomal_transposition','d_interchr_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('natural_variant_site','natural_variant_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('assembly','assembly');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_minus_2_frameshift','sequence_variant_causing_minus_2_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('major_tss','major_tss');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_missense_codon_change_in_transcript','sequence_variant_causing_missense_codon_change_in_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trna','trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('encodes_overlapping_peptides','encodes_overlapping_peptides');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nc_conserved_region','nc_conserved_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('locus_control_region','locus_control_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('s_gna_oligo','s_gna_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dna_chromosome','dna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_type_six_b','beta_turn_type_six_b');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_gene','engineered_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('wobble_base_pair','wobble_base_pair');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_amino_acid_feature','modified_amino_acid_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('t_to_c_transition','t_to_c_transition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('apicoplast_sequence','apicoplast_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('irlinv_site','irlinv_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('synthetic_sequence','synthetic_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('encodes_1_polypeptide','encodes_1_polypeptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_decreasing_transcript_stability','sequence_variant_decreasing_transcript_stability');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('group_iia_intron','group_iia_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('telomere','telomere');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('interior_intron','interior_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('edited_mrna','edited_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('catmat_right_handed_three','catmat_right_handed_three');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_effect','sequence_variant_effect');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tandem_duplication','tandem_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tmrna_gene','tmrna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pre_edited_region','pre_edited_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_hydroxynorvalylcarbamoyladenosine','n6_hydroxynorvalylcarbamoyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nucleomorphic_chromosome','nucleomorphic_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('fragmentary','fragmentary');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('single','single');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('binding_site','binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('seven_methylguanine','seven_methylguanine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('target_site_duplication','target_site_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vdj_gene','vdj_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_loss_of_function_of_polypeptide','sequence_variant_causing_loss_of_function_of_polypeptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bound_by_nucleic_acid','bound_by_nucleic_acid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('catmat_right_handed_four','catmat_right_handed_four');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('compound_chromosome','compound_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('coding_end','coding_end');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gap','gap');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('upstream_aug_codon','upstream_aug_codon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudogenic_transcript','pseudogenic_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('satellite_dna','satellite_dna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('assortment_derived_deficiency_plus_duplication','assortment_derived_deficiency_plus_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transposable_element','transposable_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('endogenous_retroviral_sequence','endogenous_retroviral_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variation_affecting_level_of_transcript','sequence_variation_affecting_level_of_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('microsatellite','microsatellite');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('encodes_different_polypeptides_different_stop','encodes_different_polypeptides_different_stop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('primary_transcript','primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('consensus_mrna','consensus_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('membrane_peptide_loop','membrane_peptide_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_complex_3d_structural_change','sequence_variant_causing_complex_3d_structural_change');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('foreign','so_foreign');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nucleotide_deletion','nucleotide_deletion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rho_independent_bacterial_terminator','rho_independent_bacterial_terminator');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_silenced_by_histone_deacetylation','gene_silenced_by_histone_deacetylation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vdj_j_c_cluster','vdj_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cpg_island','cpg_island');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('haplotype','haplotype');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_prime_o_methylinosine','two_prime_o_methylinosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dna','dna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('circular_double_stranded_rna_chromosome','circular_double_stranded_rna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mature_protein_region','mature_protein_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('b_box','b_box');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_zinc_ion_contact_site','polypeptide_zinc_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_subarray_member','gene_subarray_member');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_cassette','gene_cassette');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('oric','oric');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('deletion_breakpoint','deletion_breakpoint');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna_with_plus_2_frameshift','mrna_with_plus_2_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asx_turn_right_handed_type_one','asx_turn_right_handed_type_one');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcribed_cluster','transcribed_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variation_decreasing_level_of_transcript','sequence_variation_decreasing_level_of_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tyrosyl_trna','tyrosyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('orthologous','orthologous');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('s_gna','s_gna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('canonical_three_prime_splice_site','canonical_three_prime_splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('noncoding_exon','noncoding_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('minor_tss','minor_tss');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_two_prime_o_dimethylcytidine','five_two_prime_o_dimethylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('macronuclear_chromosome','macronuclear_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('deficient_translocation','deficient_translocation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('read_pair','read_pair');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcript_with_translational_frameshift','transcript_with_translational_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rnapol_iii_promoter_type_3','rnapol_iii_promoter_type_3');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dna_transposon','dna_transposon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('orf','orf');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('right_handed_peptide_helix','right_handed_peptide_helix');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_nest_left_right_motif','polypeptide_nest_left_right_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_splice_donor','sequence_variant_affecting_splice_donor');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('topology_attribute','topology_attribute');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirtron','mirtron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_motif','polypeptide_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('proplastid_sequence','proplastid_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('negatively_autoregulated_gene','negatively_autoregulated_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_base_site','modified_base_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_d_box_snorna_encoding','c_d_box_snorna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_assembly','sequence_assembly');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bre_motif','bre_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromoplast_gene','chromoplast_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_clip','five_prime_clip');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('golden_path','golden_path');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('alanine','alanine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cleaved_peptide_region','cleaved_peptide_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_dj_j_cluster','v_dj_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudogenic_region','pseudogenic_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methylation_guide_snorna','methylation_guide_snorna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_vj_j_c_cluster','v_vj_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_canonical_start_codon','non_canonical_start_codon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_mrna_recoded_by_translational_bypass','gene_with_mrna_recoded_by_translational_bypass');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_turn_motif','polypeptide_turn_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('autocatalytically_spliced_intron','autocatalytically_spliced_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mobile','mobile');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intron','intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('clip','clip');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dye_terminator_read','dye_terminator_read');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('argenine','argenine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dmv4_motif','dmv4_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_polypeptide_post_translational_processing_change','seq_variant_causing_polypeptide_post_trans_processing_change');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('au_rich_element','au_rich_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_breakpoint','inversion_breakpoint');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_recoding_site','five_prime_recoding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_protein_coding','non_protein_coding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mobile_intron','mobile_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vertebrate_immunoglobulin_t_cell_receptor_rearranged_segment','vertebrate_immunoglobulin_t_cell_receptor_rearranged_segment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('st_turn_right_handed_type_one','st_turn_right_handed_type_one');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna','rrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inside_intron_parallel','inside_intron_parallel');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('spliceosomal_intron','spliceosomal_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('phagemid','phagemid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('editing_block','editing_block');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('fragment_assembly','fragment_assembly');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tmrna_acceptor_piece','tmrna_acceptor_piece');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_type_six','beta_turn_type_six');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_rst','three_prime_rst');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cysteine_trna_primary_transcript','cysteine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('post_translationally_regulated_gene','post_translationally_regulated_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcriptionally_repressed','transcriptionally_repressed');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('crm','crm');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cointegrated_plasmid','cointegrated_plasmid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_sequencing_information','polypeptide_sequencing_information');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_d_spacer','three_prime_d_spacer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tiling_path_fragment','tiling_path_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('natural','so_natural');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pi_helix','pi_helix');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('possible_base_call_error','possible_base_call_error');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('adaptive_island','adaptive_island');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uridine_five_oxyacetic_acid','uridine_five_oxyacetic_acid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plus_2_translational_frameshift','plus_2_translational_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('homologous_region','homologous_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('internal_utr','internal_utr');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_level_of_translational_product','sequence_variant_affecting_level_of_translational_product');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_cytoplasmic_polypeptide_region','non_cytoplasmic_polypeptide_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('experimental_feature','experimental_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nuclear_chromosome','nuclear_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('exemplar','exemplar');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('alanine_trna_primary_transcript','alanine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n2_n2_dimethylguanosine','n2_n2_dimethylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna_hook_turn','rna_hook_turn');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcribed_spacer_region','transcribed_spacer_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plasmid_gene','plasmid_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u14_snorna','u14_snorna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('galactosyl_queuosine','galactosyl_queuosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cyanelle_gene','cyanelle_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('wild_type_rescue_gene','wild_type_rescue_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u12_intron','u12_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('aptamer','aptamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recoded_mrna','recoded_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('macronuclear_sequence','macronuclear_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ust','ust');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('selenocysteine','selenocysteine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_dicistronic_mrna','gene_with_dicistronic_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('match_part','match_part');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nucleomorphic_sequence','nucleomorphic_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('apicoplast_gene','apicoplast_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('regulon','regulon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plasmid_vector','plasmid_vector');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_tryptophan','modified_l_tryptophan');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_amino_acid_coding_codon_change_in_transcript','seq_variant_causing_amino_acid_coding_codon_change_in_trans');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('free_chromosome_arm','free_chromosome_arm');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('srp_rna_primary_transcript','srp_rna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asx_turn','asx_turn');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('anchor_binding_site','anchor_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_primary_transcript','rrna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('reading_frame','reading_frame');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dhu_loop','dhu_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n4_acetylcytidine','n4_acetylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_polypeptide_function','sequence_variant_affecting_polypeptide_function');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silenced_gene','silenced_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cloned_genomic_insert','cloned_genomic_insert');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dna_sequence_secondary_structure','dna_sequence_secondary_structure');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cdna_match','cdna_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_flanking_region','five_prime_flanking_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pyrrolysyl_trna','pyrrolysyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_methylthio_n6_cis_hydroxyisopentenyl_adenosine','two_methylthio_n6_cis_hydroxyisopentenyl_adenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('repeat_component','repeat_component');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('one_methyl_three_three_amino_three_carboxypropyl_pseudouridine','one_methyl_3_3_amino_three_carboxypropyl_pseudouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rpra_rna','rpra_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nuclease_sensitive_site','nuclease_sensitive_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_coding_exon_noncoding_region','five_prime_coding_exon_noncoding_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rnapol_iii_promoter','rnapol_iii_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tryptophan_trna_primary_transcript','try_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('region','region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tf_binding_site','tf_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('attl_site','attl_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('natural_plasmid','natural_plasmid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_n6_dimethyladenosine','n6_n6_dimethyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('laevosynaptic_chromosome','laevosynaptic_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosomal_structural_element','chromosomal_structural_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_cassette_array','gene_cassette_array');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vertebrate_immunoglobulin_t_cell_receptor_gene_cluster','vertebrate_immunoglobulin_t_cell_receptor_gene_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('canonical_five_prime_splice_site','canonical_five_prime_splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bound_by_protein','bound_by_protein');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sts_map','sts_map');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dnazyme','dnazyme');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silent_mutation','silent_mutation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_d_j_cluster','v_d_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bipartite_duplication','bipartite_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('hydroxywybutosine','hydroxywybutosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dihydrouridine','dihydrouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_rate_of_transcription','sequence_variant_affecting_rate_of_transcription');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_coding_exon_coding_region','five_prime_coding_exon_coding_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_left_handed_type_one','beta_turn_left_handed_type_one');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recoded_codon','recoded_codon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('predicted','predicted');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('resolution_site','resolution_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('seven_cyano_seven_deazaguanosine','seven_cyano_seven_deazaguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_conformational_change','sequence_variant_causing_conformational_change');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('conformational_switch','conformational_switch');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('regulated','regulated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inverted_repeat','inverted_repeat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('t_to_a_transversion','t_to_a_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('attc_site','attc_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_methyladenosine','two_methyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cross_genome_match','cross_genome_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tandem_repeat','tandem_repeat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('antisense_primary_transcript','antisense_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_polyadenylation','sequence_variant_affecting_polyadenylation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_collection','sequence_collection');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_polyadenylated_mrna','gene_with_polyadenylated_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rnapol_i_promoter','rnapol_i_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_methyluridine','three_methyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('start_codon','start_codon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('retrotransposon','retrotransposon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_gene','v_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chloroplast_dna','chloroplast_dna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('negative_sense_ssrna_viral_sequence','negative_sense_ssrna_viral_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('primer_binding_site','primer_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_box','c_box');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plasmid','plasmid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('biological_region','biological_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('g_to_a_transition','g_to_a_transition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_canonical_five_prime_splice_site','non_canonical_five_prime_splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_d_box_snorna_primary_transcript','c_d_box_snorna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trna_region','trna_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uncharacterised_change_in_nucleotide_sequence','uncharacterised_change_in_nucleotide_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_cis_hydroxyisopentenyl_adenosine','n6_cis_hydroxyisopentenyl_adenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chloroplast_sequence','chloroplast_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('exon_region','exon_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('r_five_prime_ltr_region','r_five_prime_ltr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_j_c_cluster','v_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('r_three_prime_ltr_region','r_three_prime_ltr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('snrna','snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('one_methylinosine','one_methylinosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('j_gene_recombination_feature','j_gene_recombination_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_structural_motif','polypeptide_structural_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('conserved_region','conserved_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('remark','remark');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_dna_contact','polypeptide_dna_contact');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('codon','codon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_23s','rrna_23s');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna','mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('glycyl_trna','glycyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cyanelle_sequence','cyanelle_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cds_independently_known','cds_independently_known');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('insulator','insulator');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('positive_sense_ssrna_viral_sequence','positive_sense_ssrna_viral_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('expressed_sequence_match','expressed_sequence_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('possible_assembly_error','possible_assembly_error');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u3_snorna','u3_snorna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('unorientated_interchromosomal_transposition','unorient_inter_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_manganese_ion_contact_site','polypeptide_manganese_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('g_to_t_transversion','g_to_t_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recombination_feature_of_rearranged_gene','recombination_feature_of_rearranged_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tmrna_primary_transcript','tmrna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('single_stranded_cdna','single_stranded_cdna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('experimentally_determined','experimentally_determined');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudogenic_exon','pseudogenic_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u2_intron','u2_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome','chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('encodes_alternately_spliced_transcripts','encodes_alternately_spliced_transcripts');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('aberrant_processed_transcript','aberrant_processed_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gna','gna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dsra_rna','dsra_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intron_domain','intron_domain');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cds_predicted','cds_predicted');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_asparagine','modified_l_asparagine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_d_nonamer','five_prime_d_nonamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sl2_acceptor_site','sl2_acceptor_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('snrna_primary_transcript','snrna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('translocation','translocation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_phenylalanine','modified_l_phenylalanine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('lincrna','lincrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_valine','modified_l_valine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('yac','yac');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('signal_peptide','signal_peptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('r_ltr_region','r_ltr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('srp_rna_gene','srp_rna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_transcript_processing','sequence_variant_affecting_transcript_processing');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recombination_hotspot','recombination_hotspot');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_dj_c_cluster','v_dj_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('viral_sequence','viral_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_terminal_inverted_repeat','five_prime_terminal_inverted_repeat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methoxycarbonylmethyl_two_thiouridine','five_mcm_2_thiouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('edited','edited');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('coding_start','coding_start');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_utr','three_prime_utr');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dpe1_motif','dpe1_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_tyrosine','modified_l_tyrosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_d_j_c_cluster','v_d_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('unorientated_intrachromosomal_transposition','unorient_intra_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silenced_by_histone_methylation','silenced_by_histone_methylation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('deficient_inversion','deficient_inversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_thiouridine','two_thiouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_thio_two_prime_o_methyluridine','two_thio_two_prime_o_methyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('leucoplast_sequence','leucoplast_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cds','cds');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mutation_causing_polypeptide_n_terminal_elongation','mutation_causing_polypeptide_n_terminal_elongation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polya_signal_sequence','polya_signal_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('micronuclear_sequence','micronuclear_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('glutamyl_trna','glutamyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('strna_gene','strna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('paternally_imprinted_gene','paternally_imprinted_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna_chromosome','rna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ndm3_motif','ndm3_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u1_snrna','u1_snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_hydroxymethylcytidine','five_hydroxymethylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recombination_feature','recombination_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('encodes_disjoint_polypeptides','encodes_disjoint_polypeptides');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('post_translationally_regulated','post_translationally_regulated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_fusion_gene','engineered_fusion_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_d_recombination_signal_sequence','three_prime_d_recombination_signal_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causes_exon_loss','sequence_variant_causes_exon_loss');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intermediate','intermediate');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_calcium_ion_contact_site','polypeptide_calcium_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('syntenic_region','syntenic_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sugar_edge_base_pair','sugar_edge_base_pair');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_foreign_gene','engineered_foreign_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n4_acetyl_2_prime_o_methylcytidine','n4_acetyl_2_prime_o_methylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('predicted_by_ab_initio_computation','predicted_by_ab_initio_computation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_secondary_structure','polypeptide_secondary_structure');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ncrna_gene','ncrna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna_junction_loop','rna_junction_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('haplotype_block','haplotype_block');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('oriv','oriv');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ambisense_ssrna_viral_sequence','ambisense_ssrna_viral_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('morpholino_oligo','morpholino_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('centromere','centromere');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('epigenetically_modified_gene','epigenetically_modified_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosomal_inversion','chromosomal_inversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('minus_35_signal','minus_35_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_two_prime_o_dimethyluridine','three_two_prime_o_dimethyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('four_thiouridine','four_thiouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcription_end_site','transcription_end_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pre_mirna','pre_mirna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cysteinyl_trna','cysteinyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('catmat_left_handed_three','catmat_left_handed_three');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('schellmann_loop_seven','schellmann_loop_seven');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_vdj_j_c_cluster','v_vdj_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transposable_element_insertion_site','transposable_element_insertion_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('translocation_element','translocation_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirna_primary_transcript_region','mirna_primary_transcript_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('orphan_cds','orphan_cds');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('monocistronic_mrna','monocistronic_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('natural_transposable_element','natural_transposable_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('golden_path_fragment','golden_path_fragment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('lipoprotein_signal_peptide','lipoprotein_signal_peptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_large_subunit_primary_transcript','rrna_large_subunit_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('linear_double_stranded_rna_chromosome','linear_double_stranded_rna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_increasing_rate_of_transcription','sequence_variant_increasing_rate_of_transcription');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plastid_sequence','plastid_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('irrinv_site','irrinv_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('integrated_plasmid','integrated_plasmid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_methionine','modified_l_methionine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromoplast_sequence','chromoplast_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('linear_single_stranded_rna_chromosome','linear_single_stranded_rna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('promoter_trap_construct','promoter_trap_construct');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('contig_read','contig_read');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('seven_methylguanosine','seven_methylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('stop_codon_redefined_as_selenocysteine','stop_codon_redefined_as_selenocysteine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gamma_turn','gamma_turn');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methionyl_trna','methionyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tmrna','tmrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cdna','cdna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nuclease_binding_site','nuclease_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uridine_five_oxyacetic_acid_methyl_ester','uridine_five_oxyacetic_acid_methyl_ester');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_race_clone','three_prime_race_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('circular_double_stranded_dna_chromosome','circular_double_stranded_dna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_histidine','modified_l_histidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tss_region','tss_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('positively_autoregulated_gene','positively_autoregulated_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('consensus','consensus');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('integron','integron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_metal_contact','polypeptide_metal_contact');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_loop','d_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('decayed_exon','decayed_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_inosine','modified_inosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_three_prime_overlap','three_prime_three_prime_overlap');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_five_prime_overlap','three_prime_five_prime_overlap');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_j_cluster','v_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_bulge_loop','beta_bulge_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intrachromosomal_mutation','intrachromosomal_mutation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dmv2_motif','dmv2_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intergenic_region','intergenic_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_glycinylcarbamoyladenosine','n6_glycinylcarbamoyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_feature','sequence_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('antisense_rna','antisense_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_cis_splice_site','three_prime_cis_splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gamma_turn_classic','gamma_turn_classic');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rapd','rapd');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cca_tail','cca_tail');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inverted_ring_chromosome','inverted_ring_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('linear_double_stranded_dna_chromosome','linear_double_stranded_dna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('t_to_g_transversion','t_to_g_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bruno_response_element','bruno_response_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u5_five_prime_ltr_region','u5_five_prime_ltr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_to_a_transversion','c_to_a_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('distant_three_prime_recoding_signal','distant_three_prime_recoding_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('macronucleus_destined_segment','macronucleus_destined_segment');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pre_edited_mrna','pre_edited_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pac','pac');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('base','base');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polycistronic_mrna','polycistronic_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('codon_redefined','codon_redefined');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methoxycarbonylmethyl_two_prime_o_methyluridine','five_methoxycarbonylmethyl_two_prime_o_methyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('match','match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_stop_codon_read_through','gene_with_stop_codon_read_through');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asparaginyl_trna','asparaginyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('threonyl_trna','threonyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u3_five_prime_ltr_region','u3_five_prime_ltr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_ltr','five_prime_ltr');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vj_gene','vj_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n2_methylguanosine','n2_methylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rho_dependent_bacterial_terminator','rho_dependent_bacterial_terminator');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_flanking_region','three_prime_flanking_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('genomically_contaminated_cdna_clone','genomically_contaminated_cdna_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirna_target_site','mirna_target_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('internal_guide_sequence','internal_guide_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u5_three_prime_ltr_region','u5_three_prime_ltr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mutation_causing_out_of_frame_polypeptide_n_terminal_elongation','mutation_causing_out_of_frame_polypeptide_n_terminal_elong');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('undermodified_hydroxywybutosine','undermodified_hydroxywybutosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('introgressed_chromosome_region','introgressed_chromosome_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('translationally_frameshifted','translationally_frameshifted');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosomal_deletion','chromosomal_deletion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('leucine','leucine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methylation_guide_snorna_primary_transcript','methylation_guide_snorna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trans_spliced','trans_spliced');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_isopentenylaminomethyl_uridine','five_isopentenylaminomethyl_uridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_methylthio_n6_threonyl_carbamoyladenosine','two_methylthio_n6_threonyl_carbamoyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('stop_codon','stop_codon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_no_change_of_translational_product','sequence_variant_causing_no_change_of_translational_product');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('biochemical_region_of_peptide','biochemical_region_of_peptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('interband','interband');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('clone_insert','clone_insert');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dna_constraint_sequence','dna_constraint_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('snp','snp');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromoplast_chromosome','chromoplast_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tata_box','tata_box');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_25s','rrna_25s');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plastid_gene','plastid_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asx_turn_left_handed_type_one','asx_turn_left_handed_type_one');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_increasing_transcript_stability','sequence_variant_increasing_transcript_stability');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_uridine','modified_uridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('lysyl_trna','lysyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intramembrane_polypeptide_region','intramembrane_polypeptide_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rr_tract','rr_tract');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_primary_transcript_region','rrna_primary_transcript_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('alternatively_spliced_transcript','alternatively_spliced_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ds_dna_viral_sequence','ds_dna_viral_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosomal_duplication','chromosomal_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('scrna_encoding','scrna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_copper_ion_contact_site','polypeptide_copper_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_isoleucine','modified_l_isoleucine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('clone','clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('hetero_compound_chromosome','hetero_compound_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_subarray','gene_subarray');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dicistronic_transcript','dicistronic_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silenced_by_dna_methylation','silenced_by_dna_methylation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_partially_characterised_change_in_transcript','seq_variant_causing_partly_characterised_change_in_trans');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('t_loop','t_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_serine','modified_l_serine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_thiocytidine','two_thiocytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_repeat_recoding_signal','three_prime_repeat_recoding_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('srp_rna','srp_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_binding_motif','polypeptide_binding_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_prime_o_methylguanosine','two_prime_o_methylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_polypeptide_truncation','sequence_variant_causing_polypeptide_truncation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('a_box','a_box');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recombinationally_rearranged_vertebrate_immune_system_gene','recombinationally_rearranged_vertebrate_immune_system_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('one_methylguanosine','one_methylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_glutamine','modified_l_glutamine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant','sequence_variant');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_length_variation','sequence_length_variation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('strna_encoding','strna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('plus_1_frameshift','plus_1_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('topologically_defined_region','topologically_defined_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('edited_cds','edited_cds');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_silenced_by_histone_modification','gene_silenced_by_histone_modification');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('e_box_motif','e_box_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('small_subunit_rrna','small_subunit_rrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dnasei_hypersensitive_site','dnasei_hypersensitive_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_d_dj_j_c_cluster','v_d_dj_j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('compound_chromosome_arm','compound_chromosome_arm');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('feature_attribute','feature_attribute');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('protein_match','protein_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_splicing','sequence_variant_affecting_splicing');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome_variation','chromosome_variation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('serine_threonine_motif','serine_threonine_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('allelically_excluded','allelically_excluded');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('assortment_derived_aneuploid','assortment_derived_aneuploid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('morpholino','morpholino');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_isopentenylaminomethyl_two_prime_o_methyluridine','five_isopentenylaminomethyl_two_prime_o_methyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gna_oligo','gna_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('copy_number_variation','copy_number_variation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silenced','silenced');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_methylcytidine','three_methylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dexstrosynaptic_chromosome','dexstrosynaptic_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inverted_insertional_duplication','inverted_insertional_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rescue_mini_gene','rescue_mini_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('catmat_left_handed_four','catmat_left_handed_four');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('alternate_sequence_site','alternate_sequence_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_iron_ion_contact_site','polypeptide_iron_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_to_t_transition_at_pcpg_site','c_to_t_transition_at_pcpg_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_molybdenum_ion_contact_site','polypeptide_molybdenum_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('phenylalanine_trna_primary_transcript','phe_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('h_aca_box_snorna_primary_transcript','h_aca_box_snorna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('r_gna','r_gna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intrachromosomal_transposition','intrachromosomal_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_polypeptide_localization_change','sequence_variant_causing_polypeptide_localization_change');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methylated_a','methylated_a');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_16s','rrna_16s');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n4_methylcytidine','n4_methylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('riboswitch','riboswitch');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('assortment_derived_duplication','assortment_derived_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosomal_regulatory_element','chromosomal_regulatory_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_partially_characterised_3d_structural_change','seq_var_causing_partly_characterised_3d_structural_change');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_five_prime_overlap','five_prime_five_prime_overlap');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ribozymic','ribozymic');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_derived_bipartite_deficiency','inversion_derived_bipartite_deficiency');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('invalidated_by_genomic_contamination','invalidated_by_genomic_contamination');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vj_j_cluster','vj_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_uncharacterised_change_of_translational_product','sequence_variant_causing_uncharacterised_change_of_product');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome_number_variation','chromosome_number_variation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_attribute','gene_attribute');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uag_stop_codon_signal','uag_stop_codon_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nucleotide_match','nucleotide_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('epigenetically_modified','epigenetically_modified');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('st_turn_left_handed_type_two','st_turn_left_handed_type_two');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_derived_deficiency_plus_duplication','inversion_derived_deficiency_plus_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methylaminomethyl_two_selenouridine','five_methylaminomethyl_two_selenouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('aspartic_acid_trna_primary_transcript','aspartic_acid_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nuclear_mt_pseudogene','nuclear_mt_pseudogene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('exonic_splice_enhancer','exonic_splice_enhancer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u4_snrna','u4_snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('csrb_rsmb_rna','csrb_rsmb_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('group_1_intron_homing_endonuclease_target_region','group_1_intron_homing_endonuclease_target_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('crispr','crispr');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_no_change_in_transcript','sequence_variant_causing_no_change_in_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('snorna_gene','snorna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trans_splice_junction','trans_splice_junction');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('flanking_three_prime_quadruplet_recoding_signal','flanking_three_prime_quadruplet_recoding_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_vdj_j_cluster','v_vdj_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cassette_pseudogene','cassette_pseudogene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silenced_by_histone_modification','silenced_by_histone_modification');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('proviral_gene','proviral_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_carboxyhydroxymethyl_uridine','five_carboxyhydroxymethyl_uridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mt_gene','mt_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('single_stranded_rna_chromosome','single_stranded_rna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recoding_stimulatory_region','recoding_stimulatory_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_taurinomethyluridine','five_taurinomethyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_threonine','modified_l_threonine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_d_dj_cluster','v_d_dj_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('synthetic_oligo','synthetic_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('purine_to_pyrimidine_transversion','purine_to_pyrimidine_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_nonsense_codon_change_in_transcript','sequence_variant_causing_nonsense_codon_change_in_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('antiparallel_beta_strand','antiparallel_beta_strand');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('central_hydrophobic_region_of_signal_peptide','central_hydrophobic_region_of_signal_peptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('integrated_mobile_genetic_element','integrated_mobile_genetic_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('parallel_beta_strand','parallel_beta_strand');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_dj_cluster','v_dj_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dre_motif','dre_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('non_ltr_retrotransposon','non_ltr_retrotransposon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('r_gna_oligo','r_gna_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('autoregulated','autoregulated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_lysine','modified_l_lysine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bac_end','bac_end');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pyrrolysine','pyrrolysine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('lysine','lysine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('protein_protein_contact','protein_protein_contact');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('splice_site','splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosomal_translocation','chromosomal_translocation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('epitope','epitope');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('allele','allele');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n4_n4_2_prime_o_trimethylcytidine','n4_n4_2_prime_o_trimethylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u5_ltr_region','u5_ltr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rescue_gene','rescue_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transgenic_transposable_element','transgenic_transposable_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_conserved_region','polypeptide_conserved_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sts','sts');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('a_to_c_transversion','a_to_c_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('class_ii_rna','class_ii_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nonamer_of_recombination_feature_of_vertebrate_immune_system_gene','nonamer_of_recombination_feature_of_vertebrate_im_sys_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('unedited_region','unedited_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_increasing_level_of_translation_product','sequence_variant_increasing_level_of_translation_product');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('lambda_vector','lambda_vector');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene','gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('alanyl_trna','alanyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('virtual_sequence','virtual_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('group_iib_intron','group_iib_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('retrotransposed','retrotransposed');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna_with_minus_2_frameshift','mrna_with_minus_2_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polymer_attribute','polymer_attribute');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('autosynaptic_chromosome','autosynaptic_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('peptide_helix','peptide_helix');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('partially_processed_cdna_clone','partially_processed_cdna_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rst_match','rst_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('paternally_imprinted','paternally_imprinted');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('predicted_gene','predicted_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('robertsonian_fusion','robertsonian_fusion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_prime_o_methylpseudouridine','two_prime_o_methylpseudouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pericentric_inversion','pericentric_inversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('aspartyl_trna','aspartyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('strna','strna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_intron','three_prime_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('linear','linear');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('j_nonamer','j_nonamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('a_to_t_transversion','a_to_t_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('idna','idna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n2_n2_7_trimethylguanosine','n2_n2_7_trimethylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('complex_chromosomal_mutation','complex_chromosomal_mutation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_derived_deficiency_plus_aneuploid','inversion_derived_deficiency_plus_aneuploid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asymmetric_rna_internal_loop','asymmetric_rna_internal_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('deletion','deletion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cyclic_translocation','cyclic_translocation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ars','ars');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('glutaminyl_trna','glutaminyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('allopolyploid','allopolyploid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('replicon','replicon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_prime_o_methylcytidine','two_prime_o_methylcytidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('st_turn_left_handed_type_one','st_turn_left_handed_type_one');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('paralogous_region','paralogous_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mature_transcript_region','mature_transcript_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna_with_frameshift','mrna_with_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_dj_j_cluster','d_dj_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('maxicircle_gene','maxicircle_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('st_turn_right_handed_type_two','st_turn_right_handed_type_two');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('snrna_encoding','snrna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_d_spacer','five_prime_d_spacer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('read','read');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('arginine_trna_primary_transcript','arg_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('oligo_u_tail','oligo_u_tail');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recoding_pseudoknot','recoding_pseudoknot');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methylaminomethyl_two_thiouridine','five_mam_2_thiouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('monocistronic','monocistronic');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('frame_restoring_sequence_variant','frame_restoring_sequence_variant');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transmembrane_polypeptide_region','transmembrane_polypeptide_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vector_replicon','vector_replicon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pyrosequenced_read','pyrosequenced_read');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_magnesium_ion_contact_site','polypeptide_magnesium_ion_contact_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polycistronic_transcript','polycistronic_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polya_site','polya_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('free_duplication','free_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome_structure_variation','chromosome_structure_variation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_rna_base_feature','modified_rna_base_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mutated_variant_site','mutated_variant_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gaga_motif','gaga_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('interchromosomal_mutation','interchromosomal_mutation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('prophage','prophage');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('syntenic','syntenic');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_foreign_repetitive_element','engineered_foreign_repetitive_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('translated_nucleotide_match','translated_nucleotide_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('h_aca_box_snorna','h_aca_box_snorna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vault_rna','vault_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('orphan','orphan');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('linear_single_stranded_dna_chromosome','linear_single_stranded_dna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('encodes_greater_than_1_polypeptide','encodes_greater_than_1_polypeptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('atti_site','atti_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silenced_by_histone_deacetylation','silenced_by_histone_deacetylation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('reagent','reagent');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome_fission','chromosome_fission');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ct_gene','ct_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('capped_primary_transcript','capped_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_initiator_codon_change_in_transcript','sequence_variant_causing_initiator_codon_change_in_trans');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methylinosine','methylinosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('j_spacer','j_spacer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('glutamine','glutamine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_guanosine','modified_guanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n2_7_dimethylguanosine','n2_7_dimethylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_nonconservative_amino_acid_substitution','sequence_variant_causing_nonconservative_amino_acid_sub');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_d_heptamer','three_prime_d_heptamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('invalidated_cdna_clone','invalidated_cdna_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('terminator','terminator');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('stem_loop','stem_loop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_utr_intron','five_prime_utr_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_plus_2_frameshift','sequence_variant_causing_plus_2_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome_band','chromosome_band');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mini_exon_donor_rna','mini_exon_donor_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('aneuploid','aneuploid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methyl_2_thiouridine','five_methyl_2_thiouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_silenced_by_dna_methylation','gene_silenced_by_dna_methylation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_foreign_transposable_element_gene','engineered_foreign_transposable_element_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('processed_pseudogene','processed_pseudogene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('supercontig','supercontig');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trna_encoding','trna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('reciprocal_chromosomal_translocation','reciprocal_chromosomal_translocation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('hoogsteen_base_pair','hoogsteen_base_pair');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('purine_transition','purine_transition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_d_box_snorna','c_d_box_snorna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('snorna_primary_transcript','snorna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_vj_cluster','v_vj_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u3_ltr_region','u3_ltr_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('attenuator','attenuator');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_noncoding_exon','three_prime_noncoding_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u14_snorna_primary_transcript','u14_snorna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_gene_recombination_feature','d_gene_recombination_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mte','mte');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variation_affecting_coding_sequence','sequence_variation_affecting_coding_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gcvb_rna','gcvb_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rst','rst');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('operator','operator');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ring_chromosome','ring_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ndm2_motif','ndm2_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('selenocysteine_trna_primary_transcript','selenocysteine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('edited_transcript_feature','edited_transcript_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('stop_codon_redefined_as_pyrrolysine','stop_codon_redefined_as_pyrrolysine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('homo_compound_chromosome','homo_compound_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('foreign_gene','foreign_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('four_demethylwyosine','four_demethylwyosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('guide_rna','guide_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_methylpseudouridine','three_methylpseudouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_derived_aneuploid_chromosome','inversion_derived_aneuploid_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('specific_recombination_site','specific_recombination_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inosine','inosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('foreign_transposable_element','foreign_transposable_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_gene','d_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bipartite_inversion','bipartite_inversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_plasmid','engineered_plasmid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_group_regulatory_region','gene_group_regulatory_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vd_gene','vd_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('regulatory_region','regulatory_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_decreasing_rate_of_transcription','sequence_variant_decreasing_rate_of_transcription');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('guide_rna_region','guide_rna_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence variant_affecting_transcript_stability','sequence_variant_affecting_transcript_stability');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_ten_helix','three_ten_helix');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sarcin_like_rna_motif','sarcin_like_rna_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('minus_1_translationally_frameshifted','minus_1_translationally_frameshifted');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_alanine','modified_l_alanine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_amino_acid_deletion','sequence_variant_causing_amino_acid_deletion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_cum_translocation','inversion_cum_translocation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tag','tag');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uninverted_interchromosomal_transposition','uninvert_inter_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cryptic_gene','cryptic_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transgenic','transgenic');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('genomic_clone','genomic_clone');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chromosome_breakage_sequence','chromosome_breakage_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_j_cluster','d_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_type_six_a_one','beta_turn_type_six_a_one');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ribosome_entry_site','ribosome_entry_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('left_handed_peptide_helix','left_handed_peptide_helix');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dna_aptamer','dna_aptamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('i_motif','i_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('deficient_intrachromosomal_transposition','d_intrachr_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('single_stranded_dna_chromosome','single_stranded_dna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('methylated_c','methylated_c');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ligation_based_read','ligation_based_read');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('expressed_sequence_assembly','expressed_sequence_assembly');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_two_prime_o_dimethyluridine','five_two_prime_o_dimethyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('histidine_trna_primary_transcript','histidine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('orthologous_region','orthologous_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('valine_trna_primary_transcript','valine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('operon_member','operon_member');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_group','gene_group');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transposition','transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('small_regulatory_ncrna','small_regulatory_ncrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intrachromosomal_duplication','intrachromosomal_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uaa_stop_codon_signal','uaa_stop_codon_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('minus_2_frameshift','minus_2_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('organelle_sequence','organelle_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cryptic_prophage','cryptic_prophage');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('micf_rna','micf_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('direct_tandem_duplication','direct_tandem_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('conserved','conserved');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('telomerase_rna','telomerase_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u6atac_snrna','u6atac_snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('attb_site','attb_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_array_member','gene_array_member');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polyadenylated_mrna','polyadenylated_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('symbiosis_island','symbiosis_island');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('splice_junction','splice_junction');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('fingerprint_map','fingerprint_map');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('wyosine','wyosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uga_stop_codon_signal','uga_stop_codon_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cytoplasmic_polypeptide_region','cytoplasmic_polypeptide_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('one_two_prime_o_dimethylguanosine','one_two_prime_o_dimethylguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rh_map','rh_map');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silenced_by_dna_modification','silenced_by_dna_modification');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('anticodon','anticodon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('seven_deazaguanosine','seven_deazaguanosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asparagine','asparagine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('probe','probe');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('defective_conjugative_transposon','defective_conjugative_transposon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('archaeosine','archaeosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('molecular_contact_region','molecular_contact_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('membrane_structure','membrane_structure');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('contig_collection','contig_collection');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tetraloop','tetraloop');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('coding_conserved_region','coding_conserved_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('long_terminal_repeat','long_terminal_repeat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vertebrate_immune_system_gene_recombination_signal_feature','vertebrate_immune_system_gene_recombination_signal_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('untranslated_region_polycistronic_mrna','untranslated_region_polycistronic_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('leucine_trna_primary_transcript','leucine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('circular_single_stranded_dna_chromosome','circular_single_stranded_dna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('isoleucyl_trna','isoleucyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('insertion_breakpoint','insertion_breakpoint');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transgene','transgene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna_region','mrna_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcript_attribute','transcript_attribute');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('serine_threonine_staple_motif','serine_threonine_staple_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('protein_coding','protein_coding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('enhancer_bound_by_factor','enhancer_bound_by_factor');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('recoded_by_translational_bypass','recoded_by_translational_bypass');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('operon','operon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('monocistronic_transcript','monocistronic_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_amino_acid_insertion','sequence_variant_causing_amino_acid_insertion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polyadenylated','polyadenylated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('unigene_cluster','unigene_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('vertebrate_immunoglobulin_t_cell_receptor_rearranged_gene_cluster','vertebrate_ig_t_cell_receptor_rearranged_gene_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_cassette_member','gene_cassette_member');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('stop_codon_read_through','stop_codon_read_through');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_transcript_with_translational_frameshift','gene_with_transcript_with_translational_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mnp','mnp');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('glutamic_acid','glutamic_acid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_polypeptide_amino_acid_sequence','sequence_variant_affecting_polypeptide_amino_acid_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn','beta_turn');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pathogenic_island','pathogenic_island');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ust_match','ust_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_conservative_missense_codon_change_in_transcript','seq_var_causing_conservative_missense_codon_change_in_trans');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcript_bound_by_protein','transcript_bound_by_protein');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_methyladenosine','n6_methyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cyanelle_chromosome','cyanelle_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('orit','orit');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('maternally_imprinted','maternally_imprinted');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('chloroplast_chromosome','chloroplast_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('minicircle_gene','minicircle_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_catalytic_motif','polypeptide_catalytic_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rnapol_iii_promoter_type_2','rnapol_iii_promoter_type_2');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('no_output','no_output');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('interior_coding_exon','interior_coding_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_taurinomethyl_two_thiouridine','five_taurinomethyl_two_thiouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide','polypeptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polymerase_synthesis_read','polymerase_synthesis_read');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('enhancer_binding_site','enhancer_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_left_handed_type_two','beta_turn_left_handed_type_two');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('invalidated_by_genomic_polya_primed_cdna','invalidated_by_genomic_polya_primed_cdna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_edited_transcript','gene_with_edited_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dmv1_motif','dmv1_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('post_translationally_modified_region','post_translationally_modified_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('proline','proline');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('flanking_region','flanking_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_methylthio_n6_isopentenyladenosine','two_methylthio_n6_isopentenyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypyrimidine_tract','polypyrimidine_tract');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methoxyuridine','five_methoxyuridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_to_gene_feature','gene_to_gene_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bac_cloned_genomic_insert','bac_cloned_genomic_insert');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('j_heptamer','j_heptamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_ust','three_prime_ust');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_2_prime_o_dimethyladenosine','n6_2_prime_o_dimethyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trans_splice_site','trans_splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_rescue_region','engineered_rescue_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nucleomorph_gene','nucleomorph_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna_attribute','mrna_attribute');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_three_prime_overlap','five_prime_three_prime_overlap');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('group_i_intron','group_i_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('d_cluster','d_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('genomic_dna','genomic_dna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inside_intron','inside_intron');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('hammerhead_ribozyme','hammerhead_ribozyme');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_d_heptamer','five_prime_d_heptamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intronic_splice_enhancer','intronic_splice_enhancer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_adenosine','modified_adenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_carboxymethylaminomethyluridine','five_carboxymethylaminomethyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('repeat_region','repeat_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('repeat_unit','repeat_unit');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('double_stranded_dna_chromosome','double_stranded_dna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('template_region','template_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('primary_transcript_region','primary_transcript_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mitochondrial_dna','mitochondrial_dna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcript_region','transcript_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ribozyme','ribozyme');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('matrix_attachment_site','matrix_attachment_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('imprinted','imprinted');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('est','est');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna_motif','rna_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_variation_site','polypeptide_variation_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('class_i_rna','class_i_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('oligo','oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('stop_codon_signal','stop_codon_signal');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('hypoploid','hypoploid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('exemplar_mrna','exemplar_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('c_to_g_transversion','c_to_g_transversion');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('active_peptide','active_peptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mannosyl_queuosine','mannosyl_queuosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_stop_codon_redefined_as_pyrrolysine','gene_with_stop_codon_redefined_as_pyrrolysine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('queuosine','queuosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('lna_oligo','lna_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('independently_known','independently_known');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causes_intron_gain','sequence_variant_causes_intron_gain');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('proviral_region','proviral_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('capped','capped');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('direction_attribute','direction_attribute');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('micronuclear_chromosome','micronuclear_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudogene_by_unequal_crossing_over','pseudogene_by_unequal_crossing_over');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('one_two_prime_o_dimethyladenosine','one_two_prime_o_dimethyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dpe_motif','dpe_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('seryl_trna','seryl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('integration_excision_site','integration_excision_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('noncoding_region_of_exon','noncoding_region_of_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rnase_mrp_rna','rnase_mrp_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_methoxycarbonylmethyluridine','five_methoxycarbonylmethyluridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('exon_of_single_exon_gene','exon_of_single_exon_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_dicistronic_primary_transcript','gene_with_dicistronic_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_secondary_structure','sequence_secondary_structure');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tiling_path','tiling_path');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nuclear_sequence','nuclear_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('contig','contig');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('catalytic_residue','catalytic_residue');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_site','inversion_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('aspartic_acid','aspartic_acid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dif_site','dif_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirna_gene','mirna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('valyl_trna','valyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inverted_tandem_duplication','inverted_tandem_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cis_regulatory_frameshift_element','cis_regulatory_frameshift_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('minisatellite','minisatellite');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('assembly_component','assembly_component');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('low_complexity_region','low_complexity_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('designed_sequence','designed_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('n6_n6_2_prime_o_trimethyladenosine','n6_n6_2_prime_o_trimethyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna_polymerase_promoter','rna_polymerase_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_gene_recombination_feature','v_gene_recombination_feature');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_carboxymethylaminomethyl_two_thiouridine','five_carboxymethylaminomethyl_two_thiouridine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('free_ring_duplication','free_ring_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dicistronic_mrna','dicistronic_mrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('uncharacterised_chromosomal_mutation','uncharacterised_chromosomal_mutation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_cis_splice_site','five_prime_cis_splice_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('octamer_motif','octamer_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('encodes_overlapping_peptides_different_start','encodes_overlapping_peptides_different_start');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ss_rna_viral_sequence','ss_rna_viral_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('indel','indel');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dicistronic_primary_transcript','dicistronic_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('protein_binding_site','protein_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polycistronic','polycistronic');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('asparagine_trna_primary_transcript','asparagine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('splice_enhancer','splice_enhancer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('aneuploid_chromosome','aneuploid_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('peroxywybutosine','peroxywybutosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_aspartic_acid','modified_l_aspartic_acid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('engineered_episome','engineered_episome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rnai_reagent','rnai_reagent');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rasirna','rasirna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('tmrna_region','tmrna_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_gain_of_function_of_polypeptide','sequence_variant_causing_gain_of_function_of_polypeptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bacterial_rnapol_promoter','bacterial_rnapol_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mitochondrial_sequence','mitochondrial_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trinucleotide_repeat_microsatellite_feature','trinuc_repeat_microsat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('post_translationally_regulated_by_protein_stability','post_translationally_regulated_by_protein_stability');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nc_primary_transcript','nc_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_cryptic_splice_donor_activation','sequence_variant_causing_cryptic_splice_donor_activation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('iron_responsive_element','iron_responsive_element');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('v_d_dj_j_cluster','v_d_dj_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('forward','forward');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('proviral_location','proviral_location');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('histone_binding_site','histone_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pse_motif','pse_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_type_eight','beta_turn_type_eight');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('double','double');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_nonconservative_missense_codon_change_in_transcript','seq_var_causing_nonconserv_missense_codon_change_in_trans');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_complex_change_of_translational_product','sequence_variant_causing_complex_change_of_product');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cds_supported_by_est_or_cdna_data','cds_supported_by_est_or_cdna_data');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('double_stranded_rna_chromosome','double_stranded_rna_chromosome');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('modified_l_glutamic_acid','modified_l_glutamic_acid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polypeptide_nest_motif','polypeptide_nest_motif');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('translational_frameshift','translational_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_terminal_inverted_repeat','three_prime_terminal_inverted_repeat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudogenic_trna','pseudogenic_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cap','cap');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_coding_exon','five_prime_coding_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('enzymatic','enzymatic');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('interior_exon','interior_exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('a_to_g_transition','a_to_g_transition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_inactive_catalytic_site','sequence_variant_causing_inactive_catalytic_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_methylthio_n6_hydroxynorvalyl_carbamoyladenosine','two_methylthio_n6_hydroxynorvalyl_carbamoyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('maternally_imprinted_gene','maternally_imprinted_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_terminator_codon_change_in_transcript','sequence_variant_causing_terminator_codon_change_in_trans');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('circular','circular');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('h_pseudoknot','h_pseudoknot');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcript','transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('pseudogene','pseudogene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nucleotide_duplication','nucleotide_duplication');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('direct_repeat','direct_repeat');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bacterial_terminator','bacterial_terminator');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('diplotype','diplotype');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_uncharacterised_3d_structural_change','seq_variant_causing_uncharacterised_3d_structural_change');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dj_gene','dj_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('two_prime_o_methyladenosine','two_prime_o_methyladenosine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_plus_1_frameshift_mutation','sequence_variant_causing_plus_1_frameshift_mutation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('restriction_enzyme_binding_site','restriction_enzyme_binding_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('bac','bac');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('dj_j_cluster','dj_j_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trans_splice_donor_site','trans_splice_donor_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nucleic_acid','nucleic_acid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('invalidated_by_chimeric_cdna','invalidated_by_chimeric_cdna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('histidine','histidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_component_region','gene_component_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('primer_match','primer_match');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('trna_primary_transcript','trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('loxp_site','loxp_site');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('serine','serine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('propeptide','propeptide');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('five_prime_open_reading_frame','five_prime_open_reading_frame');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('schellmann_loop_six','schellmann_loop_six');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('shine_dalgarno_sequence','shine_dalgarno_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sp6_rna_polymerase_promoter','sp6_rna_polymerase_promoter');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_editing','sequence_variant_affecting_editing');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_regulatory_region','sequence_variant_affecting_regulatory_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('lysine_trna_primary_transcript','lysine_trna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('j_c_cluster','j_c_cluster');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('assortment_derived_deficiency','assortment_derived_deficiency');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mirna_primary_transcript','mirna_primary_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_5s','rrna_5s');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('leucyl_trna','leucyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inverted_intrachromosomal_transposition','invert_intra_transposition');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('enzymatic_rna','enzymatic_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('negatively_autoregulated','negatively_autoregulated');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('anchor_region','anchor_region');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('exon','exon');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_turn_type_six_a','beta_turn_type_six_a');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('random_sequence','random_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('partially_characterised_chromosomal_mutation','partially_characterised_chromosomal_mutation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rna','rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_transcript_secondary_structure','sequence_variant_affecting_transcript_secondary_structure');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ss_oligo','ss_oligo');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('inversion_derived_duplication_plus_aneuploid','inversion_derived_duplication_plus_aneuploid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('transcript_bound_by_nucleic_acid','transcript_bound_by_nucleic_acid');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('intein_containing','intein_containing');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('h_aca_box_snorna_encoding','h_aca_box_snorna_encoding');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('rrna_cleavage_rna','rrna_cleavage_rna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('enhancer_trap_construct','enhancer_trap_construct');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_causing_uncharacterised_change_in_transcript','seq_variant_causing_uncharacterised_change_in_transcript');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gamma_turn_inverse','gamma_turn_inverse');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_d_nonamer','three_prime_d_nonamer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('selenocysteinyl_trna','selenocysteinyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_silenced_by_histone_methylation','gene_silenced_by_histone_methylation');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('u11_snrna','u11_snrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('scrna','scrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sequence_variant_affecting_copy_number','sequence_variant_affecting_copy_number');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('gene_with_stop_codon_redefined_as_selenocysteine','gene_with_stop_codon_redefined_as_selenocysteine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('silencer','silencer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('sage_tag','sage_tag');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('mrna_with_minus_1_frameshift','mrna_with_minus_1_frameshift');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('nuclear_gene','nuclear_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('cds_supported_by_domain_match_data','cds_supported_by_domain_match_data');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('internal_shine_dalgarno_sequence','internal_shine_dalgarno_sequence');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('prolyl_trna','prolyl_trna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('lysidine','lysidine');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('beta_bulge','beta_bulge');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('post_translationally_regulated_by_protein_modification','post_translationally_regulated_by_protein_modification');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('ncrna','ncrna');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('grna_gene','grna_gene');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('enhancer','enhancer');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('polymorphic_sequence_variant','polymorphic_sequence_variant');
> INSERT INTO sequence_cv_lookup_table (original_cvterm_name,relation_name) VALUES ('three_prime_clip','three_prime_clip');
> 
> CREATE INDEX sequence_cv_lookup_table_idx ON sequence_cv_lookup_table (original_cvterm_name);
> 
> 
> SET search_path=public,pg_catalog;
> -- DEPENDENCY:
> --  chado/modules/bridges/sofa-bridge.sql
> 
> -- The standard Chado pattern for protein coding genes
> -- is a feature of type 'gene' with 'mRNA' features as parts
> -- REQUIRES: 'mrna' view from so-bridge.sql
> CREATE OR REPLACE VIEW protein_coding_gene AS
>  SELECT
>   DISTINCT gene.*
>  FROM
>   feature AS gene
>   INNER JOIN feature_relationship AS fr ON (gene.feature_id=fr.object_id)
>   INNER JOIN so.mrna ON (mrna.feature_id=fr.subject_id);
> 
> 
2645c32912
< SET search_path = frange,public;
---
> SET search_path = frange,public,pg_catalog;
2928c33195
< SET search_path = public;
---
> SET search_path = public,pg_catalog;
3515c33782
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: companalysis.sql,v 1.37 2007-03-23 15:18:02 scottcain Exp $
3570c33837,33838
<     constraint analysisprop_c1 unique (analysis_id,type_id,value)
---
>     rank int not null default 0,
>     constraint analysisprop_c1 unique (analysis_id,type_id,rank)
3608a33877,33886
> 
> CREATE TABLE analysisfeatureprop (
>     analysisfeatureprop_id SERIAL PRIMARY KEY,
>     analysisfeature_id INTEGER NOT NULL REFERENCES analysisfeature(analysisfeature_id) ON DELETE CASCADE DEFERRABLE INITIALLY DEFERRED,
>     type_id INTEGER NOT NULL REFERENCES cvterm(cvterm_id) ON DELETE CASCADE DEFERRABLE INITIALLY DEFERRED,
>     value TEXT,
>     rank INTEGER NOT NULL,
>     CONSTRAINT analysisfeature_id_type_id_rank UNIQUE(analysisfeature_id, type_id, rank)
> );
> 
3639c33917
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: phenotype.sql,v 1.6 2007-04-27 16:09:46 emmert Exp $
3719c33997
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: genetic.sql,v 1.31 2008-08-25 19:53:14 scottcain Exp $
3913d34190
<     pub_id INT NOT NULL,
3919a34197,34198
>     pub_id INT not null,
>     FOREIGN KEY (pub_id) references pub (pub_id) on delete cascade,
3925c34204
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: map.sql,v 1.14 2007-03-23 15:18:02 scottcain Exp $
4020c34299
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: phylogeny.sql,v 1.11 2007-04-12 17:00:30 briano Exp $
4252c34531
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: contact.sql,v 1.5 2007-02-25 17:00:17 briano Exp $
4302c34581
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: expression.sql,v 1.14 2007-03-23 15:18:02 scottcain Exp $
4495c34774
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: mage.sql,v 1.3 2008-03-19 18:32:51 scottcain Exp $
5320c35599
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: stock.sql,v 1.7 2007-03-23 15:18:03 scottcain Exp $
5608c35887
< -- $Id: default_schema.sql,v 1.53 2008-03-28 16:05:24 scottcain Exp $
---
> -- $Id: library.sql,v 1.10 2008-03-25 16:00:43 emmert Exp $
5790a36070,36279
> -- ==========================================
> -- Chado cell line module
> --
> -- ============
> -- DEPENDENCIES
> -- ============
> -- :import feature from sequence
> -- :import synonym from sequence
> -- :import library from library
> -- :import cvterm from cv
> -- :import dbxref from general
> -- :import pub from pub
> -- :import organism from organism
> -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> 
> -- ================================================
> -- TABLE: cell_line
> -- ================================================
> 
> create table cell_line (
>         cell_line_id serial not null,
>         primary key (cell_line_id),
>         name varchar(255) null,
>         uniquename varchar(255) not null,
> 	organism_id int not null,
> 	foreign key (organism_id) references organism (organism_id) on delete cascade INITIALLY DEFERRED,
> 	timeaccessioned timestamp not null default current_timestamp,
> 	timelastmodified timestamp not null default current_timestamp,
>         constraint cell_line_c1 unique (uniquename, organism_id)
> );
> grant all on cell_line to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_line_relationship
> -- ================================================
> 
> create table cell_line_relationship (
> 	cell_line_relationship_id serial not null,
> 	primary key (cell_line_relationship_id),	
>         subject_id int not null,
> 	foreign key (subject_id) references cell_line (cell_line_id) on delete cascade INITIALLY DEFERRED,
>         object_id int not null,
> 	foreign key (object_id) references cell_line (cell_line_id) on delete cascade INITIALLY DEFERRED,
> 	type_id int not null,
> 	foreign key (type_id) references cvterm (cvterm_id) on delete cascade INITIALLY DEFERRED,
> 	constraint cell_line_relationship_c1 unique (subject_id, object_id, type_id)
> );
> grant all on cell_line_relationship to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_line_synonym
> -- ================================================
> 
> create table cell_line_synonym (
> 	cell_line_synonym_id serial not null,
> 	primary key (cell_line_synonym_id),
> 	cell_line_id int not null,
> 	foreign key (cell_line_id) references cell_line (cell_line_id) on delete cascade INITIALLY DEFERRED,
> 	synonym_id int not null,
> 	foreign key (synonym_id) references synonym (synonym_id) on delete cascade INITIALLY DEFERRED,
> 	pub_id int not null,
> 	foreign key (pub_id) references pub (pub_id) on delete cascade INITIALLY DEFERRED,
> 	is_current boolean not null default 'false',
> 	is_internal boolean not null default 'false',
> 	constraint cell_line_synonym_c1 unique (synonym_id,cell_line_id,pub_id)	
> );
> grant all on cell_line_synonym to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_line_cvterm
> -- ================================================
> 
> create table cell_line_cvterm (
> 	cell_line_cvterm_id serial not null,
> 	primary key (cell_line_cvterm_id),
> 	cell_line_id int not null,
> 	foreign key (cell_line_id) references cell_line (cell_line_id) on delete cascade INITIALLY DEFERRED,
> 	cvterm_id int not null,
> 	foreign key (cvterm_id) references cvterm (cvterm_id) on delete cascade INITIALLY DEFERRED,
> 	pub_id int not null,
> 	foreign key (pub_id) references pub (pub_id) on delete cascade INITIALLY DEFERRED,
> 	rank int not null default 0,
> 	constraint cell_line_cvterm_c1 unique (cell_line_id,cvterm_id,pub_id,rank)
> );
> grant all on cell_line_cvterm to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_line_dbxref
> -- ================================================
> 
> create table cell_line_dbxref (
> 	cell_line_dbxref_id serial not null,
> 	primary key (cell_line_dbxref_id),
> 	cell_line_id int not null,
> 	foreign key (cell_line_id) references cell_line (cell_line_id) on delete cascade INITIALLY DEFERRED,
> 	dbxref_id int not null,
> 	foreign key (dbxref_id) references dbxref (dbxref_id) on delete cascade INITIALLY DEFERRED,
> 	is_current boolean not null default 'true',
> 	constraint cell_line_dbxref_c1 unique (cell_line_id,dbxref_id)
> );
> grant all on cell_line_dbxref to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_lineprop
> -- ================================================
> 
> create table cell_lineprop (
> 	cell_lineprop_id serial not null,
> 	primary key (cell_lineprop_id),
> 	cell_line_id int not null,
> 	foreign key (cell_line_id) references cell_line (cell_line_id) on delete cascade INITIALLY DEFERRED,
> 	type_id int not null,
> 	foreign key (type_id) references cvterm (cvterm_id) on delete cascade INITIALLY DEFERRED,
> 	value text null,
> 	rank int not null default 0,
> 	constraint cell_lineprop_c1 unique (cell_line_id,type_id,rank)
> );
> grant all on cell_lineprop to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_lineprop_pub
> -- ================================================
> 
> create table cell_lineprop_pub (
> 	cell_lineprop_pub_id serial not null,
> 	primary key (cell_lineprop_pub_id),
> 	cell_lineprop_id int not null,
> 	foreign key (cell_lineprop_id) references cell_lineprop (cell_lineprop_id) on delete cascade INITIALLY DEFERRED,
> 	pub_id int not null,
> 	foreign key (pub_id) references pub (pub_id) on delete cascade INITIALLY DEFERRED,
> 	constraint cell_lineprop_pub_c1 unique (cell_lineprop_id,pub_id)
> );
> grant all on cell_lineprop_pub to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_line_feature
> -- ================================================
> 
> create table cell_line_feature (
> 	cell_line_feature_id serial not null,
> 	primary key (cell_line_feature_id),
> 	cell_line_id int not null,
> 	foreign key (cell_line_id) references cell_line (cell_line_id) on delete cascade INITIALLY DEFERRED,
> 	feature_id int not null,
> 	foreign key (feature_id) references feature (feature_id) on delete cascade INITIALLY DEFERRED,
> 	pub_id int not null,
> 	foreign key (pub_id) references pub (pub_id) on delete cascade INITIALLY DEFERRED,
> 	constraint cell_line_feature_c1 unique (cell_line_id, feature_id, pub_id)
> );
> grant all on cell_line_feature to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_line_cvtermprop
> -- ================================================
> 
> create table cell_line_cvtermprop (
> 	cell_line_cvtermprop_id serial not null,
> 	primary key (cell_line_cvtermprop_id),
> 	cell_line_cvterm_id int not null,
> 	foreign key (cell_line_cvterm_id) references cell_line_cvterm (cell_line_cvterm_id) on delete cascade INITIALLY DEFERRED,
> 	type_id int not null,
> 	foreign key (type_id) references cvterm (cvterm_id) on delete cascade INITIALLY DEFERRED,
> 	value text null,
> 	rank int not null default 0,
> 	constraint cell_line_cvtermprop_c1 unique (cell_line_cvterm_id, type_id, rank)
> );
> grant all on cell_line_cvtermprop to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_line_pub
> -- ================================================
> 
> create table cell_line_pub (
> 	cell_line_pub_id serial not null,
> 	primary key (cell_line_pub_id),
> 	cell_line_id int not null,
> 	foreign key (cell_line_id) references cell_line (cell_line_id) on delete cascade INITIALLY DEFERRED,
> 	pub_id int not null,
> 	foreign key (pub_id) references pub (pub_id) on delete cascade INITIALLY DEFERRED,
> 	constraint cell_line_pub_c1 unique (cell_line_id, pub_id)
> );
> grant all on cell_line_pub to PUBLIC;
> 
> 
> -- ================================================
> -- TABLE: cell_line_library
> -- ================================================
> 
> create table cell_line_library (
> 	cell_line_library_id serial not null,
> 	primary key (cell_line_library_id),
> 	cell_line_id int not null,
> 	foreign key (cell_line_id) references cell_line (cell_line_id) on delete cascade INITIALLY DEFERRED,
> 	library_id int not null,
> 	foreign key (library_id) references library (library_id) on delete cascade INITIALLY DEFERRED,
> 	pub_id int not null,
> 	foreign key (pub_id) references pub (pub_id) on delete cascade INITIALLY DEFERRED,
> 	constraint cell_line_library_c1 unique (cell_line_id, library_id, pub_id)
> );
> grant all on cell_line_library to PUBLIC;
> 
5899a36389
> --replaced with Rob B's improved view
5901,5902c36391,36392
<   feature_id, ref, source, type, fstart, fend,
<   score, strand, phase, seqlen, name, organism_id
---
> feature_id, ref, source, type, fstart, fend,
> score, strand, phase, seqlen, name, organism_id
5905,5907c36395,36397
<   f.feature_id, sf.name, dbx.accession, cv.name,
<   fl.fmin+1, fl.fmax, af.significance, fl.strand,
<   fl.phase, f.seqlen, f.name, f.organism_id
---
> f.feature_id, sf.name, gffdbx.accession, cv.name,
> fl.fmin+1, fl.fmax, af.significance, fl.strand,
> fl.phase, f.seqlen, f.name, f.organism_id
5909,5915c36399,36409
<      LEFT JOIN featureloc fl     ON (f.feature_id     = fl.feature_id)
<      LEFT JOIN feature sf        ON (fl.srcfeature_id = sf.feature_id)
<      LEFT JOIN feature_dbxref fd ON (f.feature_id     = fd.feature_id)
<      LEFT JOIN dbxref dbx        ON (dbx.dbxref_id    = fd.dbxref_id 
<          AND dbx.db_id IN (select db_id from db where db.name = 'GFF_source'))
<      LEFT JOIN cvterm cv         ON (f.type_id        = cv.cvterm_id)
<      LEFT JOIN analysisfeature af ON (f.feature_id    = af.feature_id);
---
> LEFT JOIN featureloc fl ON (f.feature_id = fl.feature_id)
> LEFT JOIN feature sf ON (fl.srcfeature_id = sf.feature_id)
> LEFT JOIN ( SELECT fd.feature_id, d.accession
> FROM feature_dbxref fd
> JOIN dbxref d using(dbxref_id)
> JOIN db using(db_id)
> WHERE db.name = 'GFF_source'
> ) as gffdbx
> ON (f.feature_id=gffdbx.feature_id)
> LEFT JOIN cvterm cv ON (f.type_id = cv.cvterm_id)
> LEFT JOIN analysisfeature af ON (f.feature_id = af.feature_id);
6041c36535
< --   feature_id integer,name varchar(255)
---
> --   feature_id integer,name varchar(255),organism_id integer
6053c36547,36548
<   name
---
>   name,
>   organism_id
6055c36550,36555
< SELECT feature_id,CAST(substring(uniquename from 0 for 255) as varchar(255)) as name FROM feature  
---
> SELECT feature_id,CAST(substring(uniquename from 0 for 255) as varchar(255)) as name,organism_id FROM feature  
> UNION
> SELECT feature_id, name, organism_id FROM feature where name is not null 
> UNION
> SELECT fs.feature_id,s.name,f.organism_id FROM feature_synonym fs, synonym s, feature f
>   WHERE fs.synonym_id = s.synonym_id AND fs.feature_id = f.feature_id
6057c36557,36558
< SELECT feature_id, name FROM feature where name is not null 
---
> SELECT fp.feature_id, CAST(substring(fp.value from 0 for 255) as varchar(255)) as name,f.organism_id FROM featureprop fp, feature f 
>   WHERE f.feature_id = fp.feature_id
6059,6060c36560,36561
< SELECT fs.feature_id,s.name FROM feature_synonym fs, synonym s
<   WHERE fs.synonym_id = s.synonym_id ;
---
> SELECT fd.feature_id, d.accession, f.organism_id FROM feature_dbxref fd, dbxref d,feature f
>   WHERE fd.dbxref_id = d.dbxref_id AND fd.feature_id = f.feature_id;
