Description: Build all binaries.
 The original Makefile only builds the 'findknownsnps' executable.
 This looks intentional as they seem to be unmaintained, but
 I'll make sure they can build anyway if they are to be included
 in the package in the future.
Author: Sascha Steinbiss <sascha@steinbiss.name>
--- a/Makefile
+++ b/Makefile
@@ -8,7 +8,7 @@
 #CXXFLAGS=-g -O2 -ip -align -falign-functions -Wno-deprecated -Isrc -w
 #LIBS=
 
-
+all: findknownsnps reassemble variety mapcontigs ungap
 
 findknownsnps: src/findknownsnps.o src/global_functions.o src/TChromosome.o src/TChromosomalIndices.o src/TAlignmentOutput.o src/TChromosomeAlign.o
 	$(CXX) $(CFLAGS) $(CPPFLAGS) $(CXXFLAGS) $(LDFLAGS) $(LIBS) $^ -o $@
