#!/bin/sh -e

pkg=theseus

if [ "$ADTTMP" = "" ] ; then
  ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
fi
cd $ADTTMP
cp -a /usr/share/doc/theseus/examples/* $ADTTMP
find . -name "*.gz" -exec gunzip \{\} \;

theseus 1s40.pdb
cd cytochromes
theseus -A cytc.aln -M cytc.filemap d*.pdb
theseus -A cytc.aln d*.pdb
theseus_align -f d*.pdb
